Flavia Vischi Winck - Publications

Affiliations: 
Bioquímica Universidade de São Paulo (USP), São Paulo, São Paulo, Brazil 

29 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Monteiro LFR, Giraldi LA, Winck FV. From Feasting to Fasting: The Arginine Pathway as a Metabolic Switch in Nitrogen-Deprived . Cells. 12. PMID 37408213 DOI: 10.3390/cells12101379  0.734
2022 Winck FV, Dos Santos ALW, Calderan-Rodrigues MJ. Plant Proteomics and Systems Biology. Advances in Experimental Medicine and Biology. 1346: 51-66. PMID 35113395 DOI: 10.1007/978-3-030-80352-0_3  0.304
2021 Zuvanov L, Basso Garcia AL, Correr FH, Bizarria R, Filho APDC, da Costa AH, Thomaz AT, Pinheiro ALM, Riaño-Pachón DM, Winck FV, Esteves FG, Margarido GRA, Casagrande GMS, Frajacomo HC, Martins L, et al. The experience of teaching introductory programming skills to bioscientists in Brazil. Plos Computational Biology. 17: e1009534. PMID 34762646 DOI: 10.1371/journal.pcbi.1009534  0.691
2021 Busso-Lopes AF, Carnielli CM, Winck FV, Malta de Sá Patroni F, Karina de Oliveira A, Granato DC, Pereira E Costa RA, Domingues RR, Pauletti BA, Riaño-Pachón DM, Aricetti J, Caldana C, Graner E, Della Coletta R, Dryden K, et al. A reductionist approach using primary and metastatic cell-derived extracellular vesicles reveals hub proteins associated with oral cancer prognosis. Molecular & Cellular Proteomics : McP. 100118. PMID 34186243 DOI: 10.1016/j.mcpro.2021.100118  0.712
2020 Vidotti AD, Riaño-Pachón DM, Mattiello L, Giraldi LA, Winck FV, Franco TT. Analysis of autotrophic, mixotrophic and heterotrophic phenotypes in the microalgae Chlorella vulgaris using time-resolved proteomics and transcriptomics approaches Algal Research. 51: 102060. DOI: 10.1016/J.Algal.2020.102060  0.741
2019 Castro JC, Valdés I, Gonzalez-García LN, Danies G, Cañas S, Winck FV, Ñústez CE, Restrepo S, Riaño-Pachón DM. Gene regulatory networks on transfer entropy (GRNTE): a novel approach to reconstruct gene regulatory interactions applied to a case study for the plant pathogen Phytophthora infestans. Theoretical Biology & Medical Modelling. 16: 7. PMID 30961611 DOI: 10.1186/S12976-019-0103-7  0.748
2018 Mora Salguero DA, Fernández-Niño M, Serrano-Bermúdez LM, Páez Melo DO, Winck FV, Caldana C, González Barrios AF. Development of a metabolic network dynamic model to describe distinct phenotypes occurring at different CO levels. Peerj. 6: e5528. PMID 30202653 DOI: 10.7717/Peerj.5528  0.395
2016 Winck FV, Riaño-Pachón DM, Franco TT. Editorial: Advances in Microalgae Biology and Sustainable Applications. Frontiers in Plant Science. 7: 1385. PMID 27708651 DOI: 10.3389/Fpls.2016.01385  0.696
2016 Winck FV, Melo DO, Riaño-Pachón DM, Martins MC, Caldana C, Barrios AF. Analysis of Sensitive CO2 Pathways and Genes Related to Carbon Uptake and Accumulation in Chlamydomonas reinhardtii through Genomic Scale Modeling and Experimental Validation. Frontiers in Plant Science. 7: 43. PMID 26904035 DOI: 10.3389/Fpls.2016.00043  0.767
2016 Flores IL, Kawahara R, Miguel MC, Granato DC, Domingues RR, Macedo CC, Carnielli CM, Yokoo S, Rodrigues PC, Monteiro BV, Oliveira CE, Salmon CR, Nociti FH, Lopes MA, Santos-Silva A, ... Winck FV, et al. EEF1D modulates proliferation and epithelial-mesenchymal transition in oral squamous cell carcinoma. Clinical Science (London, England : 1979). 130: 785-99. PMID 26823560 DOI: 10.1042/Cs20150646  0.344
2016 Winck FV, Páez Melo DO, Riaño-Pachón DM, Martins MCM, Caldana C, González Barrios AF. Analysis of sensitive CO2 pathways and genes related to carbon uptake and accumulation in chlamydomonas reinhardtii through genomic scale modeling and experimental validation Frontiers in Plant Science. 7. DOI: 10.3389/fpls.2016.00043  0.731
2015 Kawahara R, Meirelles GV, Heberle H, Domingues RR, Granato DC, Yokoo S, Canevarolo RR, Winck FV, Ribeiro AC, Brandão TB, Filgueiras PR, Cruz KS, Barbuto JA, Poppi RJ, Minghim R, et al. Integrative analysis to select cancer candidate biomarkers to targeted validation. Oncotarget. PMID 26540631 DOI: 10.18632/Oncotarget.6018  0.311
2015 Winck FV, Prado Ribeiro AC, Ramos Domingues R, Ling LY, Riaño-Pachón DM, Rivera C, Brandão TB, Gouvea AF, Santos-Silva AR, Coletta RD, Paes Leme AF. Insights into immune responses in oral cancer through proteomic analysis of saliva and salivary extracellular vesicles. Scientific Reports. 5: 16305. PMID 26538482 DOI: 10.1038/Srep16305  0.747
2015 Carnielli CM, Winck FV, Paes Leme AF. Functional annotation and biological interpretation of proteomics data. Biochimica Et Biophysica Acta. 1854: 46-54. PMID 25448015 DOI: 10.1016/J.Bbapap.2014.10.019  0.41
2014 Mettler T, Mühlhaus T, Hemme D, Schöttler MA, Rupprecht J, Idoine A, Veyel D, Pal SK, Yaneva-Roder L, Winck FV, Sommer F, Vosloh D, Seiwert B, Erban A, Burgos A, et al. Systems Analysis of the Response of Photosynthesis, Metabolism, and Growth to an Increase in Irradiance in the Photosynthetic Model Organism Chlamydomonas reinhardtii. The Plant Cell. 26: 2310-2350. PMID 24894045 DOI: 10.1105/Tpc.114.124537  0.686
2014 Omidbakhshfard MA, Winck FV, Arvidsson S, Riaño-Pachón DM, Mueller-Roeber B. A step-by-step protocol for formaldehyde-assisted isolation of regulatory elements from Arabidopsis thaliana. Journal of Integrative Plant Biology. 56: 527-38. PMID 24373132 DOI: 10.1111/Jipb.12151  0.751
2014 Winck FV, Belloni M, Pauletti BA, Zanella Jde L, Domingues RR, Sherman NE, Paes Leme AF. Phosphoproteome analysis reveals differences in phosphosite profiles between tumorigenic and non-tumorigenic epithelial cells. Journal of Proteomics. 96: 67-81. PMID 24211406 DOI: 10.1016/J.Jprot.2013.10.039  0.386
2013 Winck FV, Vischi Winck F, Arvidsson S, Riaño-Pachón DM, Hempel S, Koseska A, Nikoloski Z, Urbina Gomez DA, Rupprecht J, Mueller-Roeber B. Genome-wide identification of regulatory elements and reconstruction of gene regulatory networks of the green alga Chlamydomonas reinhardtii under carbon deprivation. Plos One. 8: e79909. PMID 24224019 DOI: 10.1371/Journal.Pone.0079909  0.769
2013 Winck FV, Páez Melo DO, González Barrios AF. Carbon acquisition and accumulation in microalgae Chlamydomonas: Insights from "omics" approaches. Journal of Proteomics. 94: 207-18. PMID 24120529 DOI: 10.1016/J.Jprot.2013.09.016  0.403
2013 Winck FV, Arvidsson S, Riaño-Pachón DM, Hempel S, Koseska A, Nikoloski Z, Gomez DAU, Rupprecht J, Mueller-Roeber B. Quantitative PCR of FAIRE fragments derived from the Cah1 locus. Plos One. DOI: 10.1371/Journal.Pone.0079909.G001  0.495
2012 Winck FV, Riaño-Pachón DM, Sommer F, Rupprecht J, Mueller-Roeber B. The nuclear proteome of the green alga Chlamydomonas reinhardtii. Proteomics. 12: 95-100. PMID 22065562 DOI: 10.1002/Pmic.201000782  0.762
2012 Urbina-Gómez D, Winck FV, Müller-Röber B, Riaño-Pachón D. FAIRE-seq data analysis of Chlamydomonas reinhardtii under carbon deprivation F1000research. 3. DOI: 10.7490/F1000Research.1090211.1  0.322
2012 Urbina-Gómez D, Winck FV, Müller-Röber B, Riaño-Pachón DM. FAIRE-seq data analysis of Chlamydomonas reinhardtii under carbon deprivation Nature Precedings. 7: 1-1. DOI: 10.1038/Npre.2012.7035.1  0.419
2011 Winck FV, Kwasniewski M, Wienkoop S, Mueller-Roeber B. AN OPTIMIZED METHOD FOR THE ISOLATION OF NUCLEI FROM CHLAMYDOMONAS REINHARDTII (CHLOROPHYCEAE)(1). Journal of Phycology. 47: 333-40. PMID 27021865 DOI: 10.1111/J.1529-8817.2011.00967.X  0.626
2008 Martins de Souza D, Oliveira BM, Castro-Dias E, Winck FV, Horiuchi RS, Baldasso PA, Caetano HT, Pires NK, Marangoni S, Novello JC. The untiring search for the most complete proteome representation: reviewing the methods. Briefings in Functional Genomics & Proteomics. 7: 312-21. PMID 18511486 DOI: 10.1093/Bfgp/Eln023  0.313
2007 Purcino RP, Medina CL, Martins de Souza D, Winck FV, Machado EC, Novello JC, Machado MA, Mazzafera P. Xylella fastidiosa disturbs nitrogen metabolism and causes a stress response in sweet orange Citrus sinensis cv. Pera. Journal of Experimental Botany. 58: 2733-44. PMID 17609534 DOI: 10.1093/Jxb/Erm138  0.394
2007 Lira CB, Siqueira Neto JL, Giardini MA, Winck FV, Ramos CH, Cano MI. LaRbp38: a Leishmania amazonensis protein that binds nuclear and kinetoplast DNAs. Biochemical and Biophysical Research Communications. 358: 854-60. PMID 17506988 DOI: 10.1016/J.Bbrc.2007.05.005  0.329
2007 Martins-de-Souza D, Martins D, Astua-Monge G, Coletta-Filho HD, Winck FV, Baldasso PA, de Oliveira BM, Marangoni S, Machado MA, Novello JC, Smolka MB. Absence of classical heat shock response in the citrus pathogen Xylella fastidiosa. Current Microbiology. 54: 119-23. PMID 17211542 DOI: 10.1007/S00284-006-0215-2  0.332
2003 Smolka MB, Martins-de-Souza D, Martins D, Winck FV, Santoro CE, Castellari RR, Ferrari F, Brum IJ, Galembeck E, Della Coletta Filho H, Machado MA, Marangoni S, Novello JC. Proteome analysis of the plant pathogen Xylella fastidiosa reveals major cellular and extracellular proteins and a peculiar codon bias distribution. Proteomics. 3: 224-37. PMID 12601815 DOI: 10.1002/Pmic.200390031  0.382
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