| Year |
Citation |
Score |
| 2024 |
Xu W, Kim JS, Yang T, Ya A, Sadzewicz L, Tallon L, Harris B, Sarkaria J, Jin F, Waldman T. STAG2 mutations regulate 3D genome organization, chromatin loops, and Polycomb signaling in glioblastoma multiforme. The Journal of Biological Chemistry. 107341. PMID 38705393 DOI: 10.1016/j.jbc.2024.107341 |
0.349 |
|
| 2022 |
Fu C, Ngo J, Zhang S, Lu L, Miron A, Schafer S, Gage FH, Jin F, Schumacher FR, Wynshaw-Boris A. Novel correlative analysis identifies multiple genomic variations impacting ASD with macrocephaly. Human Molecular Genetics. PMID 36519762 DOI: 10.1093/hmg/ddac300 |
0.302 |
|
| 2022 |
Zhang S, Plummer D, Lu L, Cui J, Xu W, Wang M, Liu X, Prabhakar N, Shrinet J, Srinivasan D, Fraser P, Li Y, Li J, Jin F. DeepLoop robustly maps chromatin interactions from sparse allele-resolved or single-cell Hi-C data at kilobase resolution. Nature Genetics. 54: 1013-1025. PMID 35817982 DOI: 10.1038/s41588-022-01116-w |
0.39 |
|
| 2021 |
Dong C, Simonett SP, Shin S, Stapleton DS, Schueler KL, Churchill GA, Lu L, Liu X, Jin F, Li Y, Attie AD, Keller MP, Keleş S. INFIMA leverages multi-omics model organism data to identify effector genes of human GWAS variants. Genome Biology. 22: 241. PMID 34425882 DOI: 10.1186/s13059-021-02450-8 |
0.364 |
|
| 2020 |
Weng C, Xi J, Li H, Cui J, Gu A, Lai S, Leskov K, Ke L, Jin F, Li Y. Single-cell lineage analysis reveals extensive multimodal transcriptional control during directed beta-cell differentiation. Nature Metabolism. PMID 33257854 DOI: 10.1038/s42255-020-00314-2 |
0.407 |
|
| 2020 |
Karakose E, Wang H, Inabnet W, Thakker RV, Libutti S, Fernandez-Ranvier G, Suh H, Stevenson M, Kinoshita Y, Donovan M, Antipin Y, Li Y, Liu X, Jin F, Wang P, et al. Aberrant methylation underlies insulin gene expression in human insulinoma. Nature Communications. 11: 5210. PMID 33060578 DOI: 10.1038/s41467-020-18839-1 |
0.368 |
|
| 2020 |
Lu L, Liu X, Huang WK, Giusti-Rodríguez P, Cui J, Zhang S, Xu W, Wen Z, Ma S, Rosen JD, Xu Z, Bartels CF, Kawaguchi R, Hu M, Scacheri PC, ... ... Jin F, et al. Robust Hi-C Maps of Enhancer-Promoter Interactions Reveal the Function of Non-coding Genome in Neural Development and Diseases. Molecular Cell. PMID 32592681 DOI: 10.1016/J.Molcel.2020.06.007 |
0.466 |
|
| 2019 |
Fang Z, Weng C, Li H, Tao R, Mai W, Liu X, Lu L, Lai S, Duan Q, Alvarez C, Arvan P, Wynshaw-Boris A, Li Y, Pei Y, Jin F, et al. Single-Cell Heterogeneity Analysis and CRISPR Screen Identify Key β-Cell-Specific Disease Genes. Cell Reports. 26: 3132-3144.e7. PMID 30865899 DOI: 10.1016/J.Celrep.2019.02.043 |
0.482 |
|
| 2019 |
Giusti-Rodriguez P, Lu L, Crowley C, Bryois J, Liu X, Sariaslan A, Juric I, Martin J, Ancalade N, DeCristo D, Stockmeier C, Hu M, Jin F, Li Y, Sullivan P. A Chromatin Catalog For The Interpretation Of Genetic Associations Of Psychiatric Disorders European Neuropsychopharmacology. 29. DOI: 10.1016/J.Euroneuro.2017.08.251 |
0.425 |
|
| 2018 |
Li M, Santpere G, Imamura Kawasawa Y, Evgrafov OV, Gulden FO, Pochareddy S, Sunkin SM, Li Z, Shin Y, Zhu Y, Sousa AMM, Werling DM, Kitchen RR, Kang HJ, Pletikos M, ... ... Jin F, et al. Integrative functional genomic analysis of human brain development and neuropsychiatric risks. Science (New York, N.Y.). 362. PMID 30545854 DOI: 10.1126/Science.Aat7615 |
0.427 |
|
| 2018 |
Elitt MS, Shick HE, Madhavan M, Allan KC, Clayton BLL, Weng C, Miller TE, Factor DC, Barbar L, Nawash BS, Nevin ZS, Lager AM, Li Y, Jin F, Adams DJ, et al. Chemical Screening Identifies Enhancers of Mutant Oligodendrocyte Survival and Unmasks a Distinct Pathological Phase in Pelizaeus-Merzbacher Disease. Stem Cell Reports. PMID 30146490 DOI: 10.1016/J.Stemcr.2018.07.015 |
0.329 |
|
| 2016 |
Xu Z, Zhang G, Duan Q, Chai S, Zhang B, Wu C, Jin F, Yue F, Li Y, Hu M. HiView: an integrative genome browser to leverage Hi-C results for the interpretation of GWAS variants. Bmc Research Notes. 9: 159. PMID 26969411 DOI: 10.1186/S13104-016-1947-0 |
0.589 |
|
| 2015 |
Xu Z, Zhang G, Jin F, Chen M, Furey TS, Sullivan PF, Qin Z, Hu M, Li Y. A hidden Markov random field based Bayesian method for the detection of long-range chromosomal interactions in Hi-C Data. Bioinformatics (Oxford, England). PMID 26543175 DOI: 10.1093/Bioinformatics/Btv650 |
0.4 |
|
| 2014 |
Li Y, Rivera CM, Ishii H, Jin F, Selvaraj S, Lee AY, Dixon JR, Ren B. CRISPR reveals a distal super-enhancer required for Sox2 expression in mouse embryonic stem cells. Plos One. 9: e114485. PMID 25486255 DOI: 10.1371/Journal.Pone.0114485 |
0.707 |
|
| 2014 |
Hon GC, Song CX, Du T, Jin F, Selvaraj S, Lee AY, Yen CA, Ye Z, Mao SQ, Wang BA, Kuan S, Edsall LE, Zhao BS, Xu GL, He C, et al. 5mC oxidation by Tet2 modulates enhancer activity and timing of transcriptome reprogramming during differentiation. Molecular Cell. 56: 286-97. PMID 25263596 DOI: 10.1016/J.Molcel.2014.08.026 |
0.686 |
|
| 2014 |
Dai L, Peng C, Montellier E, Lu Z, Chen Y, Ishii H, Debernardi A, Buchou T, Rousseaux S, Jin F, Sabari BR, Deng Z, Allis CD, Ren B, Khochbin S, et al. Lysine 2-hydroxyisobutyrylation is a widely distributed active histone mark. Nature Chemical Biology. 10: 365-70. PMID 24681537 DOI: 10.1038/Nchembio.1497 |
0.604 |
|
| 2014 |
Hon G, Song C, Jin F, Selvaraj S, Lee AY, Yen C, Ye Z, Mao S, Wang B, Kuan S, Edsall L, Zhao BS, Xu G, He C, Ren B. Abstract 460: Base resolution epigenomic analysis reveals a role for Tet2 in modulating enhancer activity Molecular and Cellular Biology. 74: 460-460. DOI: 10.1158/1538-7445.Am2014-460 |
0.707 |
|
| 2013 |
Jin F, Li Y, Dixon JR, Selvaraj S, Ye Z, Lee AY, Yen CA, Schmitt AD, Espinoza CA, Ren B. A high-resolution map of the three-dimensional chromatin interactome in human cells. Nature. 503: 290-4. PMID 24141950 DOI: 10.1038/Nature12644 |
0.716 |
|
| 2012 |
Lo MC, Peterson LF, Yan M, Cong X, Jin F, Shia WJ, Matsuura S, Ahn EY, Komeno Y, Ly M, Ommen HB, Chen IM, Hokland P, Willman CL, Ren B, et al. Combined gene expression and DNA occupancy profiling identifies potential therapeutic targets of t(8;21) AML. Blood. 120: 1473-84. PMID 22740448 DOI: 10.1182/Blood-2011-12-395335 |
0.54 |
|
| 2012 |
Smallwood A, Hon GC, Jin F, Henry RE, Espinosa JM, Ren B. CBX3 regulates efficient RNA processing genome-wide. Genome Research. 22: 1426-36. PMID 22684280 DOI: 10.1101/Gr.124818.111 |
0.698 |
|
| 2011 |
Jin F, Li Y, Ren B, Natarajan R. Enhancers: multi-dimensional signal integrators. Transcription. 2: 226-30. PMID 22231119 DOI: 10.4161/trns.2.5.17712 |
0.59 |
|
| 2011 |
Tan M, Luo H, Lee S, Jin F, Yang JS, Montellier E, Buchou T, Cheng Z, Rousseaux S, Rajagopal N, Lu Z, Ye Z, Zhu Q, Wysocka J, Ye Y, et al. Identification of 67 histone marks and histone lysine crotonylation as a new type of histone modification. Cell. 146: 1016-28. PMID 21925322 DOI: 10.1016/J.Cell.2011.08.008 |
0.587 |
|
| 2011 |
Jin F, Li Y, Ren B, Natarajan R. PU.1 and C/EBP(alpha) synergistically program distinct response to NF-kappaB activation through establishing monocyte specific enhancers. Proceedings of the National Academy of Sciences of the United States of America. 108: 5290-5. PMID 21402921 DOI: 10.1073/Pnas.1017214108 |
0.583 |
|
| 2007 |
Jin F, Avramova L, Huang J, Hazbun T. A yeast two-hybrid smart-pool-array system for protein-interaction mapping. Nature Methods. 4: 405-7. PMID 17450148 DOI: 10.1038/Nmeth1042 |
0.32 |
|
| 2006 |
Jin F, Hazbun T, Michaud GA, Salcius M, Predki PF, Fields S, Huang J. A pooling-deconvolution strategy for biological network elucidation. Nature Methods. 3: 183-9. PMID 16489335 DOI: 10.1038/Nmeth859 |
0.313 |
|
| 2006 |
Xie MW, Jin F, Hwang H, Hwang S, Anand V, Duncan MC, Huang J. Erratum: Insights into TOR function and rapamycin response: Chemical genomic profiling by using a high-density cell array method (Proceedings of the National Academy of Sciences of the United States of America (May 17, 2005) 102, 20 (7215-7220) DOI:10.1073/pnas.0500297102) Proceedings of the National Academy of Sciences of the United States of America. 103. DOI: 10.1073/Pnas.0603451103 |
0.318 |
|
| 2005 |
Xie MW, Jin F, Hwang H, Hwang S, Anand V, Duncan MC, Huang J. Insights into TOR function and rapamycin response: chemical genomic profiling by using a high-density cell array method. Proceedings of the National Academy of Sciences of the United States of America. 102: 7215-20. PMID 15883373 DOI: 10.1073/Pnas.0500297102 |
0.442 |
|
| 2004 |
Huang J, Zhu H, Haggarty SJ, Spring DR, Hwang H, Jin F, Snyder M, Schreiber SL. Finding new components of the target of rapamycin (TOR) signaling network through chemical genetics and proteome chips. Proceedings of the National Academy of Sciences of the United States of America. 101: 16594-9. PMID 15539461 DOI: 10.1073/Pnas.0407117101 |
0.351 |
|
| Show low-probability matches. |