| Year |
Citation |
Score |
| 2024 |
Boye C, Kalita CA, Findley AS, Alazizi A, Wei J, Wen X, Pique-Regi R, Luca F. Characterization of caffeine response regulatory variants in vascular endothelial cells. Elife. 13. PMID 38334359 DOI: 10.7554/eLife.85235 |
0.753 |
|
| 2022 |
Baca SC, Singler C, Zacharia S, Seo JH, Morova T, Hach F, Ding Y, Schwarz T, Huang CF, Anderson J, Fay AP, Kalita C, Groha S, Pomerantz MM, Wang V, et al. Genetic determinants of chromatin reveal prostate cancer risk mediated by context-dependent gene regulation. Nature Genetics. PMID 36071171 DOI: 10.1038/s41588-022-01168-y |
0.414 |
|
| 2022 |
Kalita CA, Gusev A. DeCAF: a novel method to identify cell-type specific regulatory variants and their role in cancer risk. Genome Biology. 23: 152. PMID 35804456 DOI: 10.1186/s13059-022-02708-9 |
0.312 |
|
| 2021 |
Findley AS, Zhang X, Boye C, Lin YL, Kalita CA, Barreiro L, Lohmueller KE, Pique-Regi R, Luca F. A signature of Neanderthal introgression on molecular mechanisms of environmental responses. Plos Genetics. 17: e1009493. PMID 34570765 DOI: 10.1371/journal.pgen.1009493 |
0.796 |
|
| 2021 |
Findley AS, Monziani A, Richards AL, Rhodes K, Ward MC, Kalita CA, Alazizi A, Pazokitoroudi A, Sankararaman S, Wen X, Lanfear DE, Pique-Regi R, Gilad Y, Luca F. Functional dynamic genetic effects on gene regulation are specific to particular cell types and environmental conditions. Elife. 10. PMID 33988505 DOI: 10.7554/eLife.67077 |
0.771 |
|
| 2018 |
Kalita CA, Brown CD, Freiman A, Isherwood J, Wen X, Pique-Regi R, Luca F. High throughput characterization of genetic effects on DNA:protein binding and gene transcription. Genome Research. PMID 30254052 DOI: 10.1101/Gr.237354.118 |
0.794 |
|
| 2017 |
Kalita CA, Moyerbrailean GA, Brown C, Wen X, Luca F, Pique-Regi R. QuASAR-MPRA: Accurate allele-specific analysis for massively parallel reporter assays. Bioinformatics (Oxford, England). PMID 29028988 DOI: 10.1093/Bioinformatics/Btx598 |
0.7 |
|
| 2016 |
Moyerbrailean GA, Richards AL, Kurtz D, Kalita CA, Davis GO, Harvey CT, Alazizi A, Watza D, Sorokin Y, Hauff N, Zhou X, Wen X, Pique-Regi R, Luca F. High-throughput allele-specific expression across 250 environmental conditions. Genome Research. 26: 1627-1638. PMID 27934696 DOI: 10.1101/Gr.209759.116 |
0.656 |
|
| 2016 |
Moyerbrailean GA, Kalita CA, Harvey CT, Wen X, Luca F, Pique-Regi R. Which Genetics Variants in DNase-Seq Footprints Are More Likely to Alter Binding? Plos Genetics. 12: e1005875. PMID 26901046 DOI: 10.1371/Journal.Pgen.1005875 |
0.684 |
|
| 2014 |
Romero R, Tarca AL, Chaemsaithong P, Miranda J, Chaiworapongsa T, Jia H, Hassan SS, Kalita CA, Cai J, Yeo L, Lipovich L. Transcriptome interrogation of human myometrium identifies differentially expressed sense-antisense pairs of protein-coding and long non-coding RNA genes in spontaneous labor at term. The Journal of Maternal-Fetal & Neonatal Medicine : the Official Journal of the European Association of Perinatal Medicine, the Federation of Asia and Oceania Perinatal Societies, the International Society of Perinatal Obstetricians. 27: 1397-408. PMID 24168098 DOI: 10.3109/14767058.2013.860963 |
0.418 |
|
| Show low-probability matches. |