Ryan A. Folk - Publications

Affiliations: 
Mississippi State University 

30 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Jiang Y, Yang J, Folk RA, Zhao J, Liu J, He Z, Peng H, Yang S, Xiang C, Yu X. Species delimitation of tea plants (Camellia sect. Thea) based on super-barcodes. Bmc Plant Biology. 24: 181. PMID 38468197 DOI: 10.1186/s12870-024-04882-3  0.413
2024 Folk RA, Charboneau JLM, Belitz M, Singh T, Kates HR, Soltis DE, Soltis PS, Guralnick RP, Siniscalchi CM. Anatomy of a mega-radiation: Biogeography and niche evolution in Astragalus. American Journal of Botany. e16299. PMID 38419145 DOI: 10.1002/ajb2.16299  0.374
2023 Wang C, Yap ZY, Wan P, Chen K, Folk RA, Damrel DZ, Barger W, Diamond A, Horn C, Landry GP, Samarakoon T, Harvey S, Morgan DR, Qiu Y, Li P. Molecular phylogeography and historical demography of a widespread herbaceous species from eastern North America, Podophyllum peltatum. American Journal of Botany. e16254. PMID 37938809 DOI: 10.1002/ajb2.16254  0.303
2023 Zhang Q, Folk RA, Mo ZQ, Ye H, Zhang ZY, Peng H, Zhao JL, Yang SX, Yu XQ. Phylotranscriptomic analyses reveal deep gene tree discordance in Camellia (Theaceae). Molecular Phylogenetics and Evolution. 188: 107912. PMID 37648181 DOI: 10.1016/j.ympev.2023.107912  0.363
2023 Liu L, Chen M, Folk RA, Wang M, Zhao T, Shang F, Soltis DE, Li P. Phylogenomic and syntenic data demonstrate complex evolutionary processes in early radiation of the rosids. Molecular Ecology Resources. PMID 37449554 DOI: 10.1111/1755-0998.13833  0.415
2023 Folk RA, Gaynor ML, Engle-Wrye NJ, O'Meara BC, Soltis PS, Soltis DE, Guralnick RP, Smith SA, Grady CJ, Okuyama Y. Identifying climatic drivers of hybridization with a new ancestral niche reconstruction method. Systematic Biology. PMID 37073863 DOI: 10.1093/sysbio/syad018  0.398
2022 Yu XQ, Jiang YZ, Folk RA, Zhao JL, Fu CN, Fang L, Peng H, Yang JB, Yang SX. Species discrimination in Schima (Theaceae): Next-generation super-barcodes meet evolutionary complexity. Molecular Ecology Resources. PMID 35789203 DOI: 10.1111/1755-0998.13683  0.436
2022 Pereira WJ, Knaack S, Chakraborty S, Conde D, Folk RA, Triozzi PM, Balmant KM, Dervinis C, Schmidt HW, Ané JM, Roy S, Kirst M. Functional and comparative genomics reveals conserved noncoding sequences in the nitrogen-fixing clade. The New Phytologist. PMID 35092309 DOI: 10.1111/nph.18006  0.382
2022 Zhang Q, Zhao L, Folk RA, Zhao JL, Zamora NA, Yang SX, Soltis DE, Soltis PS, Gao LM, Peng H, Yu XQ. Phylotranscriptomics of Theaceae: generic level relationships, reticulation and whole-genome duplication. Annals of Botany. PMID 35037017 DOI: 10.1093/aob/mcac007  0.374
2021 Guo X, Fang D, Sahu SK, Yang S, Guang X, Folk R, Smith SA, Chanderbali AS, Chen S, Liu M, Yang T, Zhang S, Liu X, Xu X, Soltis PS, et al. Chloranthus genome provides insights into the early diversification of angiosperms. Nature Communications. 12: 6930. PMID 34836973 DOI: 10.1038/s41467-021-26922-4  0.317
2021 Folk RA, Kates HR, LaFrance R, Soltis DE, Soltis PS, Guralnick RP. High-throughput methods for efficiently building massive phylogenies from natural history collections. Applications in Plant Sciences. 9: e11410. PMID 33680581 DOI: 10.1002/aps3.11410  0.3
2020 Folk RA, Sewnath N, Xiang CL, Sinn BT, Guralnick RP. Degradation of key photosynthetic genes in the critically endangered semi-aquatic flowering plant Saniculiphyllum guangxiense (Saxifragaceae). Bmc Plant Biology. 20: 324. PMID 32640989 DOI: 10.1186/S12870-020-02533-X  0.611
2020 Jantzen JR, Amarasinghe P, Folk RA, Reginato M, Michelangeli FA, Soltis DE, Cellinese N, Soltis PS. A two-tier bioinformatic pipeline to develop probes for target capture of nuclear loci with applications in Melastomataceae. Applications in Plant Sciences. 8: e11345. PMID 32477841 DOI: 10.1002/Aps3.11345  0.304
2020 Liu LX, Du YX, Folk RA, Wang SY, Soltis DE, Shang FD, Li P. Plastome Evolution in Saxifragaceae and Multiple Plastid Capture Events Involving and . Frontiers in Plant Science. 11: 361. PMID 32391025 DOI: 10.3389/Fpls.2020.00361  0.451
2020 Stubbs RL, Folk RA, Soltis DE, Cellinese N. Diversification in the Arctic: Biogeography and Systematics of the North AmericanMicranthes(Saxifragaceae) Systematic Botany. 45: 802-811. DOI: 10.1600/036364420X16033963649282  0.398
2019 Stubbs RL, Folk RA, Xiang CL, Chen S, Soltis DE, Cellinese N. A Phylogenomic Perspective on Evolution and Discordance in the Alpine-Arctic Plant Clade (Saxifragaceae). Frontiers in Plant Science. 10: 1773. PMID 32117341 DOI: 10.3389/Fpls.2019.01773  0.408
2019 Oswald JA, Allen JM, Witt KE, Folk RA, Albury NA, Steadman DW, Guralnick RP. Ancient DNA from a 2,500-year-old Caribbean fossil places an extinct bird (Caracara creightoni) in a phylogenetic context. Molecular Phylogenetics and Evolution. 106576. PMID 31381968 DOI: 10.1016/J.Ympev.2019.106576  0.415
2019 Yang R, Folk R, Zhang N, Gong X. Homoploid hybridization of plants in the Hengduan mountains region. Ecology and Evolution. 9: 8399-8410. PMID 31380098 DOI: 10.1002/ece3.5393  0.323
2018 Folk RA, Visger CJ, Soltis PS, Soltis DE, Guralnick RP. Geographic Range Dynamics Drove Ancient Hybridization in a Lineage of Angiosperms. The American Naturalist. 192: 171-187. PMID 30016161 DOI: 10.1086/698120  0.333
2018 Zhang N, Ma Y, Folk RA, Yu J, Pan Y, Gong X. Maintenance of species boundaries in three sympatric Ligularia (Senecioneae, Asteraceae) species. Journal of Integrative Plant Biology. PMID 29877612 DOI: 10.1111/jipb.12674  0.391
2018 Schuette S, Folk RA, Cantley JT, Martine CT. The hidden : How science Twitter uncovered a globally imperiled species in Pennsylvania, USA. Phytokeys. 87-97. PMID 29706786 DOI: 10.3897/Phytokeys.96.23667  0.362
2018 Folk RA, Soltis PS, Soltis DE, Guralnick R. New prospects in the detection and comparative analysis of hybridization in the tree of life. American Journal of Botany. PMID 29683488 DOI: 10.1002/Ajb2.1018  0.307
2017 García N, Folk RA, Meerow AW, Chamala S, Gitzendanner MA, Souza de Oliveira R, Soltis DE, Soltis PS. Deep reticulation and incomplete lineage sorting obscure the diploid phylogeny of rain-lilies and allies (Amaryllidaceae tribe Hippeastreae). Molecular Phylogenetics and Evolution. PMID 28390909 DOI: 10.1016/J.Ympev.2017.04.003  0.372
2016 Freudenstein JV, Broe MB, Folk RA, Sinn BT. Biodiversity and the Species Concept - Lineages are not Enough. Systematic Biology. PMID 27798406 DOI: 10.1093/Sysbio/Syw098  0.572
2016 Folk RA, Mandel JR, Freudenstein JV. Ancestral Gene Flow and Parallel Organellar Genome Capture Result in Extreme Phylogenomic Discord in a Lineage of Angiosperms. Systematic Biology. PMID 27637567 DOI: 10.1093/Sysbio/Syw083  0.627
2015 Folk RA, Mandel JR, Freudenstein JV. A protocol for targeted enrichment of intron-containing sequence markers for recent radiations: A phylogenomic example from Heuchera (Saxifragaceae). Applications in Plant Sciences. 3. PMID 26312196 DOI: 10.3732/Apps.1500039  0.56
2015 Folk RA, Alexander PJ. Two New Species, Heuchera soltisii and H. inconstans, with Further Taxonomic Notes for the Western Group of Heuchera Section Heuchera (Saxifragaceae) Systematic Botany. 40: 489-500. DOI: 10.1600/036364415X688853  0.304
2015 Folk RA, Freudenstein JV. “Sky islands” in the eastern U.S.A.? — Strong phylogenetic structure in the Heuchera parviflora group (Saxifragaceae) Taxon. 64: 254-271. DOI: 10.12705/642.3  0.518
2014 Folk RA, Freudenstein JV. Phylogenetic relationships and character evolution in Heuchera (Saxifragaceae) on the basis of multiple nuclear loci. American Journal of Botany. 101: 1532-50. PMID 25253713 DOI: 10.3732/Ajb.1400290  0.593
2014 Folk RA, Freudenstein JV. Revision of Heuchera Section Rhodoheuchera Subsections Hemsleyanae and Rosendahliae Subsectio Nova (Saxifragaceae) Systematic Botany. 39: 850-874. DOI: 10.1600/036364414X682300  0.533
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