Sudhir Kumar
Affiliations: | Arizona State University, Tempe, AZ, United States |
Area:
Molecular Evolution, BioinformaticsGoogle:
"Sudhir Kumar"Cross-listing: FlyTree - Computational Biology Tree
Children
Sign in to add trainee| Charlotte Konikoff | grad student | Arizona State | |
| Rajalakshmi Gurunathan | grad student | 2006 | Arizona State (FlyTree) |
| Fabia Battistuzzi | post-doc | Arizona State | |
| Yingqin Luo | post-doc | 2008- | Arizona State |
| Michael S. Rosenberg | post-doc | 2000-2002 | Arizona State |
| Antonio Marco | post-doc | 2008-2009 | Arizona State |
| Cristian Roman Palacios | post-doc | 2021-2021 | Temple University |
| Alan Filipski | research scientist | 2001- | Arizona State |
BETA: Related publications
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Publications
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| Sharma S, Kumar S. (2024) Discovering fragile clades and causal sequences in phylogenomics by evolutionary sparse learning. Molecular Biology and Evolution |
| Sharma S, Kumar S. (2024) Discovering Fragile Clades And Causal Sequences In Phylogenomics By Evolutionary Sparse Learning. Biorxiv : the Preprint Server For Biology |
| Craig JM, Gerhard GS, Sharma S, et al. (2023) Methods for Estimating Personal Disease Risk and Phylogenetic Diversity of Hematopoietic Stem Cells. Molecular Biology and Evolution |
| Miura S, Dolker T, Sanderford M, et al. (2023) Improving cellular phylogenies through the integrated use of mutation order and optimality principles. Computational and Structural Biotechnology Journal. 21: 3894-3903 |
| Huzar J, Shenoy M, Sanderford MD, et al. (2023) Bootstrap confidence for molecular evolutionary estimates from tumor bulk sequencing data. Frontiers in Bioinformatics. 3: 1090730 |
| Chroni A, Miura S, Hamilton L, et al. (2022) Clone Phylogenetics Reveals Metastatic Tumor Migrations, Maps, and Models. Cancers. 14 |
| Amendola A, Canuti M, Bianchi S, et al. (2022) Molecular evidence for SARS-CoV-2 in samples collected from patients with morbilliform eruptions since late 2019 in Lombardy, northern Italy. Environmental Research. 113979 |
| Miura S, Vu T, Choi J, et al. (2022) A phylogenetic approach to study the evolution of somatic mutational processes in cancer. Communications Biology. 5: 617 |
| Caraballo-Ortiz MA, Miura S, Sanderford M, et al. (2022) TopHap: rapid inference of key phylogenetic structures from common haplotypes in large genome collections with limited diversity. Bioinformatics (Oxford, England). 38: 2719-2726 |
| Huzar J, Kim H, Kumar S, et al. (2022) MOCA for Integrated Analysis of Gene Expression and Genetic Variation in Single Cells. Frontiers in Genetics. 13: 831040 |