Arjun Krishnan
Affiliations: | 2011-2016 | Lewis-Sigler Institute for Integrative Genomics | Princeton University, Princeton, NJ |
| 2017-2022 | Computational Math, Sci Egr | Michigan State University, East Lansing, MI | |
| 2022- | Biomedical Informatics | University of Colorado Anschutz Medical Campus, Denver, Aurora, CO |
Area:
Biomedical informatics, Machine learning, Data integrationWebsite:
https://www.thekrishnanlab.orgGoogle:
"Arjun Krishnan"Parents
Sign in to add mentor| Andy Pereira | grad student | 2006-2010 | Virginia Tech |
| Olga G. Troyanskaya | post-doc | 2011-2016 | Michigan State |
Children
Sign in to add trainee| Parker Hicks | grad student | ||
| Keenan Manpearl | grad student | ||
| Kewalin Samart | grad student | ||
| Hao Yuan | grad student | Michigan State (Evolution Tree) |
BETA: Related publications
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Publications
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| Yuan H, Mancuso CA, Johnson K, et al. (2024) Computational strategies for cross-species knowledge transfer and translational biomedicine. Arxiv |
| Gomez-Cano F, Rodriguez J, Zhou P, et al. (2024) Prioritizing Metabolic Gene Regulators through Multi-Omic Network Integration in Maize. Biorxiv : the Preprint Server For Biology |
| Mancuso CA, Johnson KA, Liu R, et al. (2024) Joint representation of molecular networks from multiple species improves gene classification. Plos Computational Biology. 20: e1011773 |
| Palande S, Kaste JAM, Roberts MD, et al. (2023) Topological data analysis reveals a core gene expression backbone that defines form and function across flowering plants. Plos Biology. 21: e3002397 |
| Mancuso CA, Liu R, Krishnan A. (2023) PyGenePlexus: A Python package for gene discovery using network-based machine learning. Bioinformatics (Oxford, England) |
| Liu R, Hirn M, Krishnan A. (2023) Accurately modeling biased random walks on weighted networks using node2vec. Bioinformatics (Oxford, England) |
| Hawkins NT, Maldaver M, Yannakopoulos A, et al. (2022) Systematic tissue annotations of genomics samples by modeling unstructured metadata. Nature Communications. 13: 6736 |
| Hickey SL, McKim A, Mancuso CA, et al. (2022) A network-based approach for isolating the chronic inflammation gene signatures underlying complex diseases towards finding new treatment opportunities. Frontiers in Pharmacology. 13: 995459 |
| Mancuso CA, Bills PS, Krum D, et al. (2022) GenePlexus: a web-server for gene discovery using network-based machine learning. Nucleic Acids Research |
| Johnson KA, Krishnan A. (2022) Robust normalization and transformation techniques for constructing gene coexpression networks from RNA-seq data. Genome Biology. 23: 1 |