Alaattin Kaya, Ph.D. - Publications

Affiliations: 
2013 Biochemistry The University of Nebraska - Lincoln, Lincoln, NE 
Area:
Biochemistry, Genetics

33 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Gujjala VA, Klimek I, Abyadeh M, Tyshkovskiy A, Oz N, Castro JP, Gladyshev VN, Newton J, Kaya A. A disease similarity approach identifies short-lived Niemann-Pick type C disease mice with accelerated brain aging as a novel mouse model for Alzheimer's disease and aging research. Biorxiv : the Preprint Server For Biology. PMID 38712089 DOI: 10.1101/2024.04.19.590328  0.376
2023 Liu W, Zhu P, Li M, Li Z, Yu Y, Liu G, Du J, Wang X, Yang J, Tian R, Seim I, Kaya A, Li M, Li M, Gladyshev VN, et al. Large-scale across species transcriptomic analysis identifies genetic selection signatures associated with longevity in mammals. The Embo Journal. e112740. PMID 37427458 DOI: 10.15252/embj.2022112740  0.446
2022 Shindyapina AV, Cho Y, Kaya A, Tyshkovskiy A, Castro JP, Deik A, Gordevicius J, Poganik JR, Clish CB, Horvath S, Peshkin L, Gladyshev VN. Rapamycin treatment during development extends life span and health span of male mice and . Science Advances. 8: eabo5482. PMID 36112674 DOI: 10.1126/sciadv.abo5482  0.37
2022 Tarrago L, Kaya A, Kim HY, Manta B, Lee BC, Gladyshev VN. The selenoprotein methionine sulfoxide reductase B1 (MSRB1). Free Radical Biology & Medicine. 191: 228-240. PMID 36084791 DOI: 10.1016/j.freeradbiomed.2022.08.043  0.477
2021 Kaya A, Phua CZJ, Lee M, Wang L, Tyshkovskiy A, Ma S, Barre B, Liu W, Harrison BR, Zhao X, Zhou X, Wasko BM, Bammler TK, Promislow DE, Kaeberlein M, et al. Evolution of natural lifespan variation and molecular strategies of extended lifespan. Elife. 10. PMID 34751131 DOI: 10.7554/eLife.64860  0.463
2020 Zhou X, Dou Q, Fan G, Zhang Q, Sanderford M, Kaya A, Johnson J, Karlsson EK, Tian X, Mikhalchenko A, Kumar S, Seluanov A, Zhang ZD, Gorbunova V, Liu X, et al. Beaver and Naked Mole Rat Genomes Reveal Common Paths to Longevity. Cell Reports. 32: 107949. PMID 32726638 DOI: 10.1016/J.Celrep.2020.107949  0.447
2020 Kaya A, Mariotti M, Tyshkovskiy A, Zhou X, Hulke ML, Ma S, Gerashchenko MV, Koren A, Gladyshev VN. Molecular signatures of aneuploidy-driven adaptive evolution. Nature Communications. 11: 588. PMID 32001709 DOI: 10.1038/S41467-019-13669-2  0.716
2018 Zhou X, Guang X, Sun D, Xu S, Li M, Seim I, Jie W, Yang L, Zhu Q, Xu J, Gao Q, Kaya A, Dou Q, Chen B, Ren W, et al. Population genomics of finless porpoises reveal an incipient cetacean species adapted to freshwater. Nature Communications. 9: 1276. PMID 29636446 DOI: 10.1038/S41467-018-03722-X  0.495
2017 Kaya A, Mariotti M, Gladyshev VN. Cytochrome c peroxidase facilitates the beneficial use of H2O2 in prokaryotes. Proceedings of the National Academy of Sciences of the United States of America. PMID 28765365 DOI: 10.1073/Pnas.1710943114  0.528
2017 Lee SG, Kaya A, Avanesov AS, Podolskiy DI, Song EJ, Go DM, Jin GD, Hwang JY, Kim EB, Kim DY, Gladyshev VN. Age-associated molecular changes are deleterious and may modulate life span through diet. Science Advances. 3: e1601833. PMID 28232953 DOI: 10.1126/Sciadv.1601833  0.471
2015 Kaya A, Ma S, Wasko B, Lee M, Kaeberlein M, Gladyshev VN. Defining Molecular Basis for Longevity Traits in Natural Yeast Isolates. Npj Aging and Mechanisms of Disease. 1. PMID 27030810 DOI: 10.1038/npjamd.2015.1  0.489
2015 Lee BC, Kaya A, Gladyshev VN. Methionine restriction and life-span control. Annals of the New York Academy of Sciences. PMID 26663138 DOI: 10.1111/Nyas.12973  0.499
2015 Kaya A, Gerashchenko MV, Seim I, Labarre J, Toledano MB, Gladyshev VN. Adaptive aneuploidy protects against thiol peroxidase deficiency by increasing respiration via key mitochondrial proteins. Proceedings of the National Academy of Sciences of the United States of America. 112: 10685-90. PMID 26261310 DOI: 10.1073/Pnas.1505315112  0.732
2015 Kaya A, Lee BC, Gladyshev VN. Regulation of Protein Function by Reversible Methionine Oxidation and the Role of Selenoprotein MsrB1. Antioxidants & Redox Signaling. 23: 814-22. PMID 26181576 DOI: 10.1089/Ars.2015.6385  0.545
2015 Kaya A, Lobanov AV, Gladyshev VN. Evidence that mutation accumulation does not cause aging in Saccharomyces cerevisiae. Aging Cell. 14: 366-71. PMID 25702753 DOI: 10.1111/Acel.12290  0.501
2015 Kaya A, Lobanov AV, Gladyshev VN. Evidence that mutation accumulation does not cause aging in Saccharomyces cerevisiae Aging Cell. 14: 366-371. DOI: 10.1111/acel.12290  0.418
2014 Kaya A, Lobanov AV, Gerashchenko MV, Koren A, Fomenko DE, Koc A, Gladyshev VN. Thiol peroxidase deficiency leads to increased mutational load and decreased fitness in Saccharomyces cerevisiae. Genetics. 198: 905-17. PMID 25173844 DOI: 10.1534/Genetics.114.169243  0.719
2014 Lee BC, Kaya A, Ma S, Kim G, Gerashchenko MV, Yim SH, Hu Z, Harshman LG, Gladyshev VN. Methionine restriction extends lifespan of Drosophila melanogaster under conditions of low amino-acid status. Nature Communications. 5: 3592. PMID 24710037 DOI: 10.1038/Ncomms4592  0.698
2014 Bozdag GO, Kaya A, Koc A, Noll GA, Prüfer D, Karakaya HC. Characterization of a cDNA from Beta maritima that confers nickel tolerance in yeast. Gene. 538: 251-7. PMID 24487090 DOI: 10.1016/J.Gene.2014.01.052  0.344
2014 Labunskyy VM, Gerashchenko MV, Delaney JR, Kaya A, Kennedy BK, Kaeberlein M, Gladyshev VN. Lifespan extension conferred by endoplasmic reticulum secretory pathway deficiency requires induction of the unfolded protein response. Plos Genetics. 10: e1004019. PMID 24391512 DOI: 10.1371/Journal.Pgen.1004019  0.722
2013 Lee BC, Péterfi Z, Hoffmann FW, Moore RE, Kaya A, Avanesov A, Tarrago L, Zhou Y, Weerapana E, Fomenko DE, Hoffmann PR, Gladyshev VN. MsrB1 and MICALs regulate actin assembly and macrophage function via reversible stereoselective methionine oxidation. Molecular Cell. 51: 397-404. PMID 23911929 DOI: 10.1016/J.Molcel.2013.06.019  0.539
2013 Le DT, Tarrago L, Watanabe Y, Kaya A, Lee BC, Tran U, Nishiyama R, Fomenko DE, Gladyshev VN, Tran LS. Diversity of plant methionine sulfoxide reductases B and evolution of a form specific for free methionine sulfoxide. Plos One. 8: e65637. PMID 23776515 DOI: 10.1371/Journal.Pone.0065637  0.561
2012 Liang X, Kaya A, Zhang Y, Le DT, Hua D, Gladyshev VN. Characterization of methionine oxidation and methionine sulfoxide reduction using methionine-rich cysteine-free proteins. Bmc Biochemistry. 13: 21. PMID 23088625 DOI: 10.1186/1471-2091-13-21  0.531
2012 Tarrago L, Kaya A, Weerapana E, Marino SM, Gladyshev VN. Methionine sulfoxide reductases preferentially reduce unfolded oxidized proteins and protect cells from oxidative protein unfolding. The Journal of Biological Chemistry. 287: 24448-59. PMID 22628550 DOI: 10.1074/Jbc.M112.374520  0.554
2011 Uluisik I, Kaya A, Fomenko DE, Karakaya HC, Carlson BA, Gladyshev VN, Koc A. Boron stress activates the general amino acid control mechanism and inhibits protein synthesis. Plos One. 6: e27772. PMID 22114689 DOI: 10.1371/Journal.Pone.0027772  0.546
2011 Lee BC, Lobanov AV, Marino SM, Kaya A, Seravalli J, Hatfield DL, Gladyshev VN. A 4-selenocysteine, 2-selenocysteine insertion sequence (SECIS) element methionine sulfoxide reductase from Metridium senile reveals a non-catalytic function of selenocysteines. The Journal of Biological Chemistry. 286: 18747-55. PMID 21393246 DOI: 10.1074/Jbc.M111.229807  0.633
2011 Fomenko DE, Koc A, Agisheva N, Jacobsen M, Kaya A, Malinouski M, Rutherford JC, Siu KL, Jin DY, Winge DR, Gladyshev VN. Thiol peroxidases mediate specific genome-wide regulation of gene expression in response to hydrogen peroxide. Proceedings of the National Academy of Sciences of the United States of America. 108: 2729-34. PMID 21282621 DOI: 10.1073/Pnas.1010721108  0.722
2011 Uluisik I, Kaya A, Unlu ES, Avsar K, Karakaya HC, Yalcin T, Koc A. Genome-wide identification of genes that play a role in boron stress response in yeast. Genomics. 97: 106-11. PMID 21035538 DOI: 10.1016/J.Ygeno.2010.10.006  0.427
2011 Atik AE, Bozdağ GO, Akinci E, Kaya A, Koç A, Yalçin T. Proteomic changes during boron tolerance in barley(Hordeum vulgare) and the role of vacuolar proton-translocating ATPase subunit E Turkish Journal of Botany. 35: 379-388. DOI: 10.3906/Bot-1007-29  0.401
2010 Kaya A, Koc A, Lee BC, Fomenko DE, Rederstorff M, Krol A, Lescure A, Gladyshev VN. Compartmentalization and regulation of mitochondrial function by methionine sulfoxide reductases in yeast. Biochemistry. 49: 8618-25. PMID 20799725 DOI: 10.1021/Bi100908V  0.574
2010 Liang X, Fomenko DE, Hua D, Kaya A, Gladyshev VN. Diversity of protein and mRNA forms of mammalian methionine sulfoxide reductase B1 due to intronization and protein processing. Plos One. 5: e11497. PMID 20634897 DOI: 10.1371/Journal.Pone.0011497  0.573
2009 Kaya A, Karakaya HC, Fomenko DE, Gladyshev VN, Koc A. Identification of a novel system for boron transport: Atr1 is a main boron exporter in yeast. Molecular and Cellular Biology. 29: 3665-74. PMID 19414602 DOI: 10.1128/Mcb.01646-08  0.549
2009 Le DT, Lee BC, Marino SM, Zhang Y, Fomenko DE, Kaya A, Hacioglu E, Kwak GH, Koc A, Kim HY, Gladyshev VN. Functional analysis of free methionine-R-sulfoxide reductase from Saccharomyces cerevisiae. The Journal of Biological Chemistry. 284: 4354-64. PMID 19049972 DOI: 10.1074/Jbc.M805891200  0.532
Show low-probability matches.