Aine Mary Duffy - Publications

Affiliations: 
Nathan Kline Institute, Orangeburg, NY, United States 
Area:
neuroanatomy

14/69 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Bermudez-Hernandez K, Lu YL, Moretto J, Jain S, LaFrancois JJ, Duffy AM, Scharfman HE. Hilar granule cells of the mouse dentate gyrus: effects of age, septotemporal location, strain, and selective deletion of the proapoptotic gene BAX. Brain Structure & Function. PMID 28314928 DOI: 10.1007/S00429-017-1391-5  0.508
2017 Moretto JN, Duffy ÁM, Scharfman HE. Acute restraint stress decreases c-fos immunoreactivity in hilar mossy cells of the adult dentate gyrus. Brain Structure & Function. PMID 28190104 DOI: 10.1007/S00429-016-1349-Z  0.537
2016 Kam K, Duffy ÁM, Moretto J, LaFrancois JJ, Scharfman HE. Interictal spikes during sleep are an early defect in the Tg2576 mouse model of β-amyloid neuropathology. Scientific Reports. 6: 20119. PMID 26818394 DOI: 10.1038/Srep20119  0.637
2015 Harte-Hargrove LC, Varga-Wesson A, Duffy AM, Milner TA, Scharfman HE. Opioid receptor-dependent sex differences in synaptic plasticity in the hippocampal mossy fiber pathway of the adult rat. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 35: 1723-38. PMID 25632146 DOI: 10.1523/Jneurosci.0820-14.2015  0.623
2015 Duffy AM, Morales-Corraliza J, Bermudez-Hernandez KM, Schaner MJ, Magagna-Poveda A, Mathews PM, Scharfman HE. Entorhinal cortical defects in Tg2576 mice are present as early as 2-4 months of age. Neurobiology of Aging. 36: 134-48. PMID 25109765 DOI: 10.1016/J.Neurobiolaging.2014.07.001  0.528
2013 Garzón M, Duffy AM, Chan J, Lynch MK, Mackie K, Pickel VM. Dopamine D₂ and acetylcholine α7 nicotinic receptors have subcellular distributions favoring mediation of convergent signaling in the mouse ventral tegmental area. Neuroscience. 252: 126-43. PMID 23954803 DOI: 10.1016/J.Neuroscience.2013.08.008  0.661
2013 Duffy AM, Schaner MJ, Chin J, Scharfman HE. Expression of c-fos in hilar mossy cells of the dentate gyrus in vivo. Hippocampus. 23: 649-55. PMID 23640815 DOI: 10.1002/Hipo.22138  0.554
2013 Skucas VA, Duffy AM, Harte-Hargrove LC, Magagna-Poveda A, Radman T, Chakraborty G, Schroeder CE, MacLusky NJ, Scharfman HE. Testosterone depletion in adult male rats increases mossy fiber transmission, LTP, and sprouting in area CA3 of hippocampus. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 33: 2338-55. PMID 23392664 DOI: 10.1523/Jneurosci.3857-12.2013  0.593
2012 Lee H, Dvorak D, Kao HY, Duffy ÁM, Scharfman HE, Fenton AA. Early cognitive experience prevents adult deficits in a neurodevelopmental schizophrenia model. Neuron. 75: 714-24. PMID 22920261 DOI: 10.1016/J.Neuron.2012.06.016  0.496
2011 Duffy AM, Fitzgerald ML, Chan J, Robinson DC, Milner TA, Mackie K, Pickel VM. Acetylcholine α7 nicotinic and dopamine D2 receptors are targeted to many of the same postsynaptic dendrites and astrocytes in the rodent prefrontal cortex. Synapse (New York, N.Y.). 65: 1350-67. PMID 21858872 DOI: 10.1002/Syn.20977  0.661
2011 Skucas VA, Mathews IB, Yang J, Cheng Q, Treister A, Duffy AM, Verkman AS, Hempstead BL, Wood MA, Binder DK, Scharfman HE. Impairment of select forms of spatial memory and neurotrophin-dependent synaptic plasticity by deletion of glial aquaporin-4. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 31: 6392-7. PMID 21525279 DOI: 10.1523/Jneurosci.6249-10.2011  0.583
2011 Duffy AM, Schaner MJ, Wu SH, Staniszewski A, Kumar A, Arévalo JC, Arancio O, Chao MV, Scharfman HE. A selective role for ARMS/Kidins220 scaffold protein in spatial memory and trophic support of entorhinal and frontal cortical neurons. Experimental Neurology. 229: 409-20. PMID 21419124 DOI: 10.1016/J.Expneurol.2011.03.008  0.576
2011 Barouk S, Hintz T, Li P, Duffy AM, MacLusky NJ, Scharfman HE. 17β-estradiol increases astrocytic vascular endothelial growth factor (VEGF) in adult female rat hippocampus. Endocrinology. 152: 1745-51. PMID 21343256 DOI: 10.1210/En.2010-1290  0.507
2009 Duffy AM, Zhou P, Milner TA, Pickel VM. Spatial and intracellular relationships between the alpha7 nicotinic acetylcholine receptor and the vesicular acetylcholine transporter in the prefrontal cortex of rat and mouse. Neuroscience. 161: 1091-103. PMID 19374941 DOI: 10.1016/J.Neuroscience.2009.04.024  0.634
Low-probability matches (unlikely to be authored by this person)
2013 Keef KD, Saxton SN, McDowall RA, Kaminski RE, Duffy AM, Cobine CA. Functional role of vasoactive intestinal polypeptide in inhibitory motor innervation in the mouse internal anal sphincter. The Journal of Physiology. 591: 1489-506. PMID 23339175 DOI: 10.1113/Jphysiol.2012.247684  0.183
2012 Duffy AM, Cobine CA, Keef KD. Changes in neuromuscular transmission in the W/W(v) mouse internal anal sphincter. Neurogastroenterology and Motility : the Official Journal of the European Gastrointestinal Motility Society. 24: e41-55. PMID 22074497 DOI: 10.1111/J.1365-2982.2011.01806.X  0.128
2024 Park JK, Petrazzini BO, Bafna S, Duffy Á, Forrest IS, Vy HM, Marquez-Luna C, Verbanck M, Narula J, Rosenson RS, Jordan DM, Rocheleau G, Do R. Muesli Intake May Protect Against Coronary Artery Disease: Mendelian Randomization on 13 Dietary Traits. Jacc. Advances. 3. PMID 38737007 DOI: 10.1016/j.jacadv.2024.100888  0.12
2024 Forrest IS, Duffy Á, Park JK, Vy HMT, Pasquale LR, Nadkarni GN, Cho JH, Do R. Genome-first evaluation with exome sequence and clinical data uncovers underdiagnosed genetic disorders in a large healthcare system. Cell Reports. Medicine. 101518. PMID 38642551 DOI: 10.1016/j.xcrm.2024.101518  0.12
2010 Duffy AM, O'Brien T, McMahon JM. Generation of antioxidant adenovirus gene transfer vectors encoding CuZnSOD, MnSOD, and catalase. Methods in Molecular Biology (Clifton, N.J.). 594: 381-93. PMID 20072932 DOI: 10.1007/978-1-60761-411-1_27  0.095
2013 Duffy AM, Hölscher C. The incretin analogue D-Ala2GIP reduces plaque load, astrogliosis and oxidative stress in an APP/PS1 mouse model of Alzheimer's disease. Neuroscience. 228: 294-300. PMID 23103794 DOI: 10.1016/j.neuroscience.2012.10.045  0.091
2012 Benninghoff AD, Orner GA, Buchner CH, Hendricks JD, Duffy AM, Williams DE. Promotion of hepatocarcinogenesis by perfluoroalkyl acids in rainbow trout. Toxicological Sciences : An Official Journal of the Society of Toxicology. 125: 69-78. PMID 21984479 DOI: 10.1093/toxsci/kfr267  0.066
2005 Barr MP, Byrne AM, Duffy AM, Condron CM, Devocelle M, Harriott P, Bouchier-Hayes DJ, Harmey JH. A peptide corresponding to the neuropilin-1-binding site on VEGF(165) induces apoptosis of neuropilin-1-expressing breast tumour cells. British Journal of Cancer. 92: 328-33. PMID 15655556 DOI: 10.1038/sj.bjc.6602308  0.062
2023 Park JK, Bafna S, Forrest IS, Duffy Á, Marquez-Luna C, Petrazzini BO, Vy HM, Jordan DM, Verbanck M, Narula J, Rosenson RS, Rocheleau G, Do R. Phenome-wide Mendelian randomization study of plasma triglyceride levels and 2,600 disease traits. Elife. 12. PMID 36988189 DOI: 10.7554/eLife.80560  0.062
2006 Cooney R, Hynes SO, Duffy AM, Sharif F, O'Brien T. Adenoviral-mediated gene transfer of nitric oxide synthase isoforms and vascular cell proliferation. Journal of Vascular Research. 43: 462-72. PMID 16921253 DOI: 10.1159/000095163  0.061
2004 Gibson B, Duffy AM, Gould Fogerite S, Krause-Elsmore S, Lu R, Shang G, Chen ZW, Mannino RJ, Bouchier-Hayes DJ, Harmey JH. A novel gene delivery system for mammalian cells. Anticancer Research. 24: 483-8. PMID 15152947  0.051
2023 Forrest IS, Petrazzini BO, Duffy Á, Park JK, O'Neal AJ, Jordan DM, Rocheleau G, Nadkarni GN, Cho JH, Blazer AD, Do R. A machine learning model identifies patients in need of autoimmune disease testing using electronic health records. Nature Communications. 14: 2385. PMID 37169741 DOI: 10.1038/s41467-023-37996-7  0.048
2020 Duffy Á, Verbanck M, Dobbyn A, Won HH, Rein JL, Forrest IS, Nadkarni G, Rocheleau G, Do R. Tissue-specific genetic features inform prediction of drug side effects in clinical trials. Science Advances. 6. PMID 32917698 DOI: 10.1126/sciadv.abb6242  0.048
2012 Holladay CA, Duffy AM, Chen X, Sefton MV, O'Brien TD, Pandit AS. Recovery of cardiac function mediated by MSC and interleukin-10 plasmid functionalised scaffold. Biomaterials. 33: 1303-14. PMID 22078809 DOI: 10.1016/J.Biomaterials.2011.10.019  0.048
2008 Mylotte LA, Duffy AM, Murphy M, O'Brien T, Samali A, Barry F, Szegezdi E. Metabolic flexibility permits mesenchymal stem cell survival in an ischemic environment. Stem Cells (Dayton, Ohio). 26: 1325-36. PMID 18308942 DOI: 10.1634/stemcells.2007-1072  0.046
2024 Duffy Á, Petrazzini BO, Stein D, Park JK, Forrest IS, Gibson K, Vy HM, Chen R, Márquez-Luna C, Mort M, Verbanck M, Schlessinger A, Itan Y, Cooper DN, Rocheleau G, et al. Development of a human genetics-guided priority score for 19,365 genes and 399 drug indications. Nature Genetics. PMID 38172303 DOI: 10.1038/s41588-023-01609-2  0.044
2000 Duffy AM. Mechanism of cyclooxygenase induction by interleukin-lβin cardiomyocytes: A Cytoprotective effect Blood. 96: 154b.  0.043
2022 Rocheleau G, Forrest IS, Duffy Á, Bafna S, Dobbyn A, Verbanck M, Won HH, Jordan DM, Do R. A tissue-level phenome-wide network map of colocalized genes and phenotypes in the UK Biobank. Communications Biology. 5: 849. PMID 35987940 DOI: 10.1038/s42003-022-03820-z  0.043
2010 Karol KG, Arumuganathan K, Boore JL, Duffy AM, Everett KD, Hall JD, Hansen SK, Kuehl JV, Mandoli DF, Mishler BD, Olmstead RG, Renzaglia KS, Wolf PG. Complete plastome sequences of Equisetum arvense and Isoetes flaccida: implications for phylogeny and plastid genome evolution of early land plant lineages. Bmc Evolutionary Biology. 10: 321. PMID 20969798 DOI: 10.1186/1471-2148-10-321  0.043
2013 Wu JH, Ferguson AR, Murray BG, Duffy AM, Jia Y, Cheng C, Martin PJ. Fruit quality in induced Polyploids of Actinidia chinensis Hortscience. 48: 701-707.  0.039
2015 Duffy AM, Stensvold MC, Farrar DR. Independent gametophytes of Hymenophyllum wrightii in North America: Not as rare as we thought American Fern Journal. 105: 45-55. DOI: 10.1640/0002-8444-105.1.45  0.037
2019 Chan L, Beers K, Yau AA, Chauhan K, Duffy Á, Chaudhary K, Debnath N, Saha A, Pattharanitima P, Cho J, Kotanko P, Federman A, Coca SG, Van Vleck T, Nadkarni GN. Natural language processing of electronic health records is superior to billing codes to identify symptom burden in hemodialysis patients. Kidney International. PMID 31883805 DOI: 10.1016/j.kint.2019.10.023  0.037
2020 Chaudhary K, Vaid A, Duffy Á, Paranjpe I, Jaladanki S, Paranjpe M, Johnson K, Gokhale A, Pattharanitima P, Chauhan K, O'Hagan R, Van Vleck T, Coca SG, Cooper R, Glicksberg B, et al. Utilization of Deep Learning for Subphenotype Identification in Sepsis-Associated Acute Kidney Injury. Clinical Journal of the American Society of Nephrology : Cjasn. PMID 33033164 DOI: 10.2215/CJN.09330819  0.037
1985 Duffy AM, Sullivan MS, DiMarco NM, Liepa GU. Effects of dietary protein on serum and biliary constituents and gallstone formation in hamsters Nutrition Reports International. 31: 1319-1330.  0.036
2014 Schilling MP, Wolf PG, Duffy AM, Rai HS, Rowe CA, Richardson BA, Mock KE. Genotyping-by-sequencing for Populus population genomics: an assessment of genome sampling patterns and filtering approaches. Plos One. 9: e95292. PMID 24748384 DOI: 10.1371/Journal.Pone.0095292  0.034
2013 Campbell T, Longhurst M, Duffy AM, Wolf PG, Shelton BE. Science Teaching Orientations and Technology-Enhanced Tools for Student Learning Research in Science Education. 43: 2035-2057. DOI: 10.1007/S11165-012-9342-X  0.029
2008 Duffy AM. Stress responsiveness in nestlings: A comparison of two sampling techniques Auk. 125: 225-229. DOI: 10.1525/auk.2008.125.1.225  0.028
2009 Hubel DH, Howe PD, Duffy AM, Hernández A. Scotopic foveal afterimages. Perception. 38: 313-6. PMID 19400439 DOI: 10.1068/p6103  0.027
2019 Chauhan K, Pattharanitima P, Patel N, Duffy A, Saha A, Chaudhary K, Debnath N, Van Vleck T, Chan L, Nadkarni GN, Coca SG. Rate of Correction of Hypernatremia and Health Outcomes in Critically Ill Patients. Clinical Journal of the American Society of Nephrology : Cjasn. PMID 30948456 DOI: 10.2215/CJN.10640918  0.026
2008 Johnson MW, Maestranzi S, Duffy AM, Dewar DH, Forbes A, Bjarnason I, Sherwood RA, Ciclitira P, Nicholls JR. Faecal calprotectin: a noninvasive diagnostic tool and marker of severity in pouchitis. European Journal of Gastroenterology & Hepatology. 20: 174-9. PMID 18301296 DOI: 10.1097/MEG.0b013e3282f1c9a7  0.026
2010 Campbell T, Wang SK, Hsu HY, Duffy AM, Wolf PG. Learning with Web Tools, Simulations, and Other Technologies in Science Classrooms Journal of Science Education and Technology. 19: 505-511. DOI: 10.1007/S10956-010-9217-8  0.026
2021 Pattharanitima P, Vaid A, Jaladanki SK, Paranjpe I, O'Hagan R, Chauhan K, Van Vleck TT, Duffy A, Chaudhary K, Glicksberg BS, Neyra JA, Coca SG, Chan L, Nadkarni GN. Comparison of Approaches for Prediction of Renal Replacement Therapy-Free Survival in Patients with Acute Kidney Injury. Blood Purification. 1-7. PMID 33631752 DOI: 10.1159/000513700  0.025
2007 McNeilage MA, Duffy AM, Fraser LG, Marsh HD, Hofstee BJ. All together now: The development and use of hermaphrodite breeding lines in actinidia deliciosa Acta Horticulturae. 753: 191-198.  0.024
1986 Duffy AM, Stevens MW, McLennan G. The immunogold staining technique for the measurement of lymphocyte subpopulations in bronchoalveolar lavage fluid. Acta Cytologica. 30: 152-6. PMID 2421508  0.023
2010 Oliver MJ, Murdock AG, Mishler BD, Kuehl JV, Boore JL, Mandoli DF, Everett KD, Wolf PG, Duffy AM, Karol KG. Chloroplast genome sequence of the moss Tortula ruralis: gene content, polymorphism, and structural arrangement relative to other green plant chloroplast genomes. Bmc Genomics. 11: 143. PMID 20187961 DOI: 10.1186/1471-2164-11-143  0.023
2009 Duffy AM, Kelchner SA, Wolf PG. Conservation of selection on matK following an ancient loss of its flanking intron. Gene. 438: 17-25. PMID 19236909 DOI: 10.1016/j.gene.2009.02.006  0.023
1996 Seymour MT, Slevin ML, Kerr DJ, Cunningham D, James RD, Ledermann JA, Perren TJ, McAdam WA, Harper PG, Neoptolemos JP, Nicholson M, Duffy AM, Stephens RJ, Stenning SP, Taylor I. Randomized trial assessing the addition of interferon alpha-2a to fluorouracil and leucovorin in advanced colorectal cancer. Colorectal Cancer Working Party of the United Kingdom Medical Research Council. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 14: 2280-8. PMID 8708718  0.023
2005 Duffy AM, O'Doherty AM, O'Brien T, Strappe PM. Purification of adenovirus and adeno-associated virus: comparison of novel membrane-based technology to conventional techniques. Gene Therapy. 12: S62-72. PMID 16231057 DOI: 10.1038/sj.gt.3302616  0.019
2022 Forrest IS, Petrazzini BO, Duffy Á, Park JK, Marquez-Luna C, Jordan DM, Rocheleau G, Cho JH, Rosenson RS, Narula J, Nadkarni GN, Do R. Machine learning-based marker for coronary artery disease: derivation and validation in two longitudinal cohorts. Lancet (London, England). PMID 36563696 DOI: 10.1016/S0140-6736(22)02079-7  0.019
2021 Shutze W, Rendon R, Lee V, Hu M, Duffy Á, Adelman M. A prospective randomized feasibility trial comparing angiography and angiography with intravascular ultrasound for treatment of hemodialysis access failures. Vascular. 17085381211027439. PMID 34170716 DOI: 10.1177/17085381211027439  0.018
2001 Duffy AM, Atkinson TS. Learning to teach struggling (and non-struggling) elementary school readers: An analysis of preservice teachers' knowledges Reading Research and Instruction. 41: 83-102.  0.017
2001 Baumann JF, Duffy AM. Teacher-researcher methodology: Themes, variations, and possibilities Reading Teacher. 54: 608-615.  0.017
2014 Sessa EB, Banks JA, Barker MS, Der JP, Duffy AM, Graham SW, Hasebe M, Langdale J, Li FW, Marchant DB, Pryer KM, Rothfels CJ, Roux SJ, Salmi ML, Sigel EM, et al. Between two fern genomes. Gigascience. 3: 15. PMID 25324969 DOI: 10.1186/2047-217X-3-15  0.017
2009 Johnson MW, Maestranzi S, Duffy AM, Dewar DH, Ciclitira PJ, Sherwood RA, Nicholls JR. Faecal M2-pyruvate kinase: a novel, noninvasive marker of ileal pouch inflammation. European Journal of Gastroenterology & Hepatology. 21: 544-50. PMID 19300275 DOI: 10.1097/MEG.0b013e3283040cb3  0.017
2012 Liu H, Bowman M, Hunt WA, Duffy AM. Enabling behavior reuse in development of virtual environment applications Proceedings - Winter Simulation Conference. DOI: 10.1109/WSC.2012.6465246  0.015
2009 Eglon MN, Duffy AM, O'Brien T, Strappe PM. Purification of adenoviral vectors by combined anion exchange and gel filtration chromatography. The Journal of Gene Medicine. 11: 978-89. PMID 19670285 DOI: 10.1002/jgm.1383  0.014
2015 Wolf DF, Duffy AM, Heal KV. Whole life costs and benefits of sustainable urban drainage systems in Dunfermline, Scotland International Low Impact Development Conference 2015 - Lid: It Works in All Climates and Soils - Proceedings of the 2015 International Low Impact Development Conference. 419-427. DOI: 10.1061/9780784479025.043  0.01
2012 Clark JL, Funke MM, Duffy AM, Smith JF. Phylogeny of a neotropical clade in the gesneriaceae: More tales of convergent evolution International Journal of Plant Sciences. 173: 894-916. DOI: 10.1086/667229  0.01
2011 Wolf PG, Der JP, Duffy AM, Davidson JB, Grusz AL, Pryer KM. The evolution of chloroplast genes and genomes in ferns. Plant Molecular Biology. 76: 251-61. PMID 20976559 DOI: 10.1007/s11103-010-9706-4  0.01
2010 Wolf PG, Roper JM, Duffy AM. The evolution of chloroplast genome structure in ferns. Genome / National Research Council Canada = Gã©Nome / Conseil National De Recherches Canada. 53: 731-8. PMID 20924422 DOI: 10.1139/g10-061  0.01
2010 Duffy AM, Liying T, Ong L. Singapore teens' perceived ownership of online sources and credibility abstract HTML First Monday. 15.  0.01
2008 Yates BW, Duffy AM. Statistical analysis of the metrological properties of float glass Proceedings of Spie - the International Society For Optical Engineering. 7077. DOI: 10.1117/12.795278  0.01
2005 Reeve JL, Duffy AM, O'Brien T, Samali A. Don't lose heart--therapeutic value of apoptosis prevention in the treatment of cardiovascular disease. Journal of Cellular and Molecular Medicine. 9: 609-22. PMID 16202209  0.01
2001 Duffy AM. Balance, literacy acceleration, and responsive teaching in a summer school literacy program for elementary school struggling readers Reading Research and Instruction. 40: 67-100.  0.01
2000 Duffy AM, Lumsden LF, Caddle CR, Chick RR, Newell GR. The efficacy of Anabat ultrasonic detectors and harp traps for surveying microchiropterans in south-eastern Australia Acta Chiropterologica. 2: 127-144.  0.01
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