Attila Karsi, Ph.D. - Publications

Affiliations: 
2001 Auburn University, Auburn, AL, United States 
Area:
Fisheries and Aquaculture Agriculture, Molecular Biology

72 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Kalindamar S, Kordon AO, Abdelhamed H, Tan W, Pinchuk LM, Karsi A. Edwardsiella ictaluri evpP is required for colonization of channel catfish ovary cells and necrosis in anterior kidney macrophages. Cellular Microbiology. e13135. PMID 31742869 DOI: 10.1111/cmi.13135  0.36
2019 Kordon AO, Kalindamar S, Majors K, Abdelhamed H, Tan W, Karsi A, Pinchuk LM. Effects of Live Attenuated Vaccine and Wild Type Strains of on Phagocytosis, Bacterial Killing, and Survival of Catfish B Cells. Frontiers in Immunology. 10: 2383. PMID 31649682 DOI: 10.3389/fimmu.2019.02383  0.36
2019 Abdelhamed H, Lawrence ML, Ramachandran R, Karsi A. Validation of Predicted Virulence Factors in Identified Using Comparative Genomics. Toxins. 11. PMID 31480280 DOI: 10.3390/toxins11090508  0.36
2019 Tekedar HC, Kumru S, Blom J, Perkins AD, Griffin MJ, Abdelhamed H, Karsi A, Lawrence ML. Comparative genomics of Aeromonas veronii: Identification of a pathotype impacting aquaculture globally. Plos One. 14: e0221018. PMID 31465454 DOI: 10.1371/journal.pone.0221018  0.36
2019 Abdelhamed H, Banes M, Karsi A, Lawrence ML. Recombinant ATPase of Virulent Protects Channel Catfish Against Motile Septicemia. Frontiers in Immunology. 10: 1641. PMID 31379840 DOI: 10.3389/fimmu.2019.01641  0.36
2019 Abdelhamed H, Karsi A, Lawrence ML. Efficient Gene Deletion Method for Listeria monocytogenes. Methods in Molecular Biology (Clifton, N.J.). 2016: 159-170. PMID 31197718 DOI: 10.1007/978-1-4939-9570-7_15  0.36
2019 Kordon AO, Abdelhamed H, Ahmed H, Baumgartner W, Karsi A, Pinchuk LM. Assessment of the Live Attenuated and Wild-Type -Induced Immune Gene Expression and Langerhans-Like Cell Profiles in the Immune-Related Organs of Catfish. Frontiers in Immunology. 10: 392. PMID 30894864 DOI: 10.3389/fimmu.2019.00392  0.36
2019 Kalindamar S, Lu J, Abdelhamed H, Tekedar HC, Lawrence ML, Karsi A. Transposon mutagenesis and identification of mutated genes in growth-delayed Edwardsiella ictaluri. Bmc Microbiology. 19: 55. PMID 30849940 DOI: 10.1186/s12866-019-1429-3  0.36
2019 Castañeda CD, McDaniel CD, Abdelhamed H, Karsi A, Kiess AS. Evaluating bacterial colonization of a developing broiler embryo after in ovo injection with a bioluminescent bacteria. Poultry Science. PMID 30789222 DOI: 10.3382/ps/pez053  0.36
2018 Tekedar HC, Abdelhamed H, Kumru S, Blom J, Karsi A, Lawrence ML. Comparative Genomics of Secretion Systems and Mutational Analysis of and Genes From T6SS. Frontiers in Microbiology. 9: 3216. PMID 30687246 DOI: 10.3389/fmicb.2018.03216  0.36
2018 Akgul A, Nho SW, Kalindamar S, Tekedar HC, Abdalhamed H, Lawrence ML, Karsi A. Universal Stress Proteins Contribute Virulence in Catfish. Frontiers in Microbiology. 9: 2931. PMID 30546354 DOI: 10.3389/fmicb.2018.02931  0.36
2018 Nho SW, Abdelhamed H, Paul D, Park S, Mauel MJ, Karsi A, Lawrence ML. Taxonomic and Functional Metagenomic Profile of Sediment From a Commercial Catfish Pond in Mississippi. Frontiers in Microbiology. 9: 2855. PMID 30524416 DOI: 10.3389/fmicb.2018.02855  0.36
2018 Abdelhamed H, Lawrence ML, Karsi A. Development and Characterization of a Novel Live Attenuated Vaccine Against Enteric Septicemia of Catfish. Frontiers in Microbiology. 9: 1819. PMID 30131791 DOI: 10.3389/fmicb.2018.01819  0.36
2018 Abdelhamed H, Tekedar HC, Ozdemir O, Hsu CY, Arick MA, Karsi A, Lawrence ML. Complete Genome Sequence of Multidrug-Resistant Edwardsiella ictaluri Strain MS-17-156. Genome Announcements. 6. PMID 29853512 DOI: 10.1128/genomeA.00477-18  0.36
2018 Abdelhamed H, Ozdemir O, Tekedar HC, Arick MA, Hsu CY, Karsi A, Lawrence ML. Complete Genome Sequence of Multidrug-Resistant Plesiomonas shigelloides Strain MS-17-188. Genome Announcements. 6. PMID 29724851 DOI: 10.1128/genomeA.00387-18  0.36
2017 Kordon AO, Abdelhamed H, Ahmed H, Park JY, Karsi A, Pinchuk LM. Phagocytic and Bactericidal Properties of Channel Catfish Peritoneal Macrophages Exposed to Edwardsiella ictaluri Live Attenuated Vaccine and Wild-Type Strains. Frontiers in Microbiology. 8: 2638. PMID 29375507 DOI: 10.3389/fmicb.2017.02638  0.36
2017 Abdelhamed H, Lawrence ML, Karsi A. The Role of TonB Gene in Edwardsiella ictaluri Virulence. Frontiers in Physiology. 8: 1066. PMID 29326601 DOI: 10.3389/fphys.2017.01066  0.36
2017 Nho SW, Abdelhamed H, Karsi A, Lawrence ML. Improving safety of a live attenuated Edwardsiella ictaluri vaccine against enteric septicemia of catfish and evaluation of efficacy. Veterinary Microbiology. 210: 83-90. PMID 29103702 DOI: 10.1016/j.vetmic.2017.09.004  0.36
2017 Abdelhamed H, Ibrahim I, Baumgartner W, Lawrence ML, Karsi A. The virulence and immune protection of Edwardsiella ictaluri HemR mutants in catfish. Fish & Shellfish Immunology. PMID 29097322 DOI: 10.1016/j.fsi.2017.10.041  0.36
2017 Abdelhamed H, Ibrahim I, Baumgartner W, Lawrence ML, Karsi A. Characterization of Histopathological and Ultrastructural Changes in Channel Catfish Experimentally Infected with Virulent Aeromonas hydrophila. Frontiers in Microbiology. 8: 1519. PMID 28861049 DOI: 10.3389/fmicb.2017.01519  0.36
2017 Abdelhamed H, Ibrahim I, Nho SW, Banes MM, Wills RW, Karsi A, Lawrence ML. Evaluation of three recombinant outer membrane proteins, OmpA1, Tdr, and TbpA, as potential vaccine antigens against virulent Aeromonas hydrophila infection in channel catfish (Ictalurus punctatus). Fish & Shellfish Immunology. PMID 28532667 DOI: 10.1016/j.fsi.2017.05.043  0.36
2017 Tekedar HC, Karsi A, Reddy JS, Nho SW, Kalindamar S, Lawrence ML. Comparative Genomics and Transcriptional Analysis of Flavobacterium columnare Strain ATCC 49512. Frontiers in Microbiology. 8: 588. PMID 28469601 DOI: 10.3389/fmicb.2017.00588  0.36
2017 Tekedar HC, Kumru S, Kalindamar S, Karsi A, Waldbieser GC, Sonstegard T, Schroeder SG, Liles MR, Griffin MJ, Lawrence ML. Draft Genome Sequences of Three Aeromonas hydrophila Isolates from Catfish and Tilapia. Genome Announcements. 5. PMID 28104665 DOI: 10.1128/genomeA.01509-16  0.36
2016 Abdelhamed H, Nho SW, Turaga G, Banes MM, Karsi A, Lawrence ML. Protective efficacy of four recombinant fimbrial proteins of virulent Aeromonas hydrophila strain ML09-119 in channel catfish. Veterinary Microbiology. 197: 8-14. PMID 27938688 DOI: 10.1016/j.vetmic.2016.10.026  0.36
2016 Abdelhamed H, Lu J, Lawrence ML, Karsi A. Ferric hydroxamate uptake system contributes to Edwardsiella ictaluri virulence. Microbial Pathogenesis. PMID 27666508 DOI: 10.1016/j.micpath.2016.09.018  0.96
2016 Kordon AO, Scott MA, Ibrahim I, Abdelhamed H, Ahmed H, Baumgartner W, Karsi A, Pinchuk LM. Identification of Langerhans-like cells in the immunocompetent tissues of channel catfish, Ictalurus punctatus. Fish & Shellfish Immunology. PMID 27645905 DOI: 10.1016/j.fsi.2016.09.033  0.96
2016 Abdelhamed H, Lu J, Lawrence ML, Karsi A. Involvement of tolQ and tolR genes in Edwardsiella ictaluri virulence. Microbial Pathogenesis. PMID 27622343 DOI: 10.1016/j.micpath.2016.09.011  0.96
2016 Salehi S, Howe K, Brooks J, Lawrence ML, Bailey RH, Karsi A. Identification of Salmonella enterica serovar Kentucky genes involved in attachment to chicken skin. Bmc Microbiology. 16: 168. PMID 27473153 DOI: 10.1186/s12866-016-0781-9  0.96
2015 Reddy S, Akgul A, Karsi A, Abdelhamed H, Wills RW, Lawrence ML. The role of Listeria monocytogenes cell wall surface anchor protein LapB in virulence, adherence, and intracellular replication. Microbial Pathogenesis. PMID 26724740 DOI: 10.1016/j.micpath.2015.12.012  0.96
2015 Altinok I, Capkin E, Karsi A. Succinate dehydrogenase mutant of Listonella anguillarum protects rainbow trout against vibriosis. Vaccine. 33: 5572-7. PMID 26382599 DOI: 10.1016/j.vaccine.2015.09.003  0.96
2015 Dumpala PR, Peterson BC, Lawrence ML, Karsi A. Identification of Differentially Abundant Proteins of Edwardsiella ictaluri during Iron Restriction. Plos One. 10: e0132504. PMID 26168192 DOI: 10.1371/journal.pone.0132504  0.96
2015 Nho SW, Abdelhamed H, Reddy S, Karsi A, Lawrence M. Identification of high-risk Listeria monocytogenes serotypes in lineage I (serotype 1/2a, 1/2c, 3a, and 3c) using multiplex PCR. Journal of Applied Microbiology. PMID 26095922 DOI: 10.1111/jam.12876  0.96
2015 Abdelhamed H, Lawrence ML, Karsi A. A novel suicide plasmid for efficient gene mutation in Listeria monocytogenes. Plasmid. 81: 1-8. PMID 26038185 DOI: 10.1016/j.plasmid.2015.05.003  0.96
2015 Tekedar HC, Karsi A, Akgul A, Kalindamar S, Waldbieser GC, Sonstegard T, Schroeder SG, Lawrence ML. Complete Genome Sequence of Fish Pathogen Aeromonas hydrophila AL06-06. Genome Announcements. 3. PMID 25908146 DOI: 10.1128/genomeA.00368-15  0.36
2014 Dahal N, Abdelhamed H, Karsi A, Lawrence ML. Tissue persistence and vaccine efficacy of tricarboxylic acid cycle and one-carbon metabolism mutant strains of Edwardsiella ictaluri. Vaccine. 32: 3971-6. PMID 24837777 DOI: 10.1016/j.vaccine.2014.05.016  0.96
2014 Dahal N, Abdelhamed H, Lu J, Karsi A, Lawrence ML. Effect of multiple mutations in tricarboxylic acid cycle and one-carbon metabolism pathways on Edwardsiella ictaluri pathogenesis. Veterinary Microbiology. 169: 107-12. PMID 24418045 DOI: 10.1016/j.vetmic.2013.12.006  0.96
2013 Dahal N, Abdelhamed H, Lu J, Karsi A, Lawrence ML. Tricarboxylic acid cycle and one-carbon metabolism pathways are important in Edwardsiella ictaluri virulence. Plos One. 8: e65973. PMID 23762452 DOI: 10.1371/journal.pone.0065973  0.96
2013 Abdelhamed H, Lu J, Shaheen A, Abbass A, Lawrence ML, Karsi A. Construction and evaluation of an Edwardsiella ictaluri fhuC mutant. Veterinary Microbiology. 162: 858-65. PMID 23201245 DOI: 10.1016/j.vetmic.2012.11.006  0.96
2013 Declercq AM, Boyen F, Van den Broeck W, Bossier P, Karsi A, Haesebrouck F, Decostere A. Antimicrobial susceptibility pattern of Flavobacterium columnare isolates collected worldwide from 17 fish species Journal of Fish Diseases. 36: 45-55. PMID 22957716 DOI: 10.1111/j.1365-2761.2012.01410.x  0.96
2012 Tekedar HC, Karsi A, Gillaspy AF, Dyer DW, Benton NR, Zaitshik J, Vamenta S, Banes MM, Gülsoy N, Aboko-Cole M, Waldbieser GC, Lawrence ML. Genome sequence of the fish pathogen Flavobacterium columnare ATCC 49512. Journal of Bacteriology. 194: 2763-4. PMID 22535941 DOI: 10.1128/JB.00281-12  0.96
2011 Menanteau-Ledouble S, Karsi A, Lawrence ML. Importance of skin abrasion as a primary site of adhesion for Edwardsiella ictaluri and impact on invasion and systematic infection in channel catfish Ictalurus punctatus. Veterinary Microbiology. 148: 425-30. PMID 20869817 DOI: 10.1016/j.vetmic.2010.08.022  0.96
2010 Howe K, Karsi A, Germon P, Wills RW, Lawrence ML, Bailey RH. Development of stable reporter system cloning luxCDABE genes into chromosome of Salmonella enterica serotypes using Tn7 transposon. Bmc Microbiology. 10: 197. PMID 20653968 DOI: 10.1186/1471-2180-10-197  0.96
2010 Dumpala PR, Gülsoy N, Lawrence ML, Karsi A. Proteomic analysis of the fish pathogen Flavobacterium columnare. Proteome Science. 8: 26. PMID 20525376 DOI: 10.1186/1477-5956-8-26  0.96
2010 Godiska R, Mead D, Dhodda V, Wu C, Hochstein R, Karsi A, Usdin K, Entezam A, Ravin N. Linear plasmid vector for cloning of repetitive or unstable sequences in Escherichia coli. Nucleic Acids Research. 38: e88. PMID 20040575 DOI: 10.1093/nar/gkp1181  0.96
2009 Dumpala PR, Lawrence ML, Karsi A. Proteome analysis of Edwardsiella ictaluri. Proteomics. 9: 1353-63. PMID 19253294 DOI: 10.1002/pmic.200800652  0.96
2009 Karsi A, Gülsoy N, Corb E, Dumpala PR, Lawrence ML. High-throughput bioluminescence-based mutant screening strategy for identification of bacterial virulence genes. Applied and Environmental Microbiology. 75: 2166-75. PMID 19201969 DOI: 10.1128/AEM.02449-08  0.96
2008 Karsi A, Howe K, Kirkpatrick TB, Wills R, Bailey RH, Lawrence ML. Development of bioluminescent Salmonella strains for use in food safety. Bmc Microbiology. 8: 10. PMID 18211715 DOI: 10.1186/1471-2180-8-10  0.96
2008 Soto E, Mauel MJ, Karsi A, Lawrence ML. Genetic and virulence characterization of Flavobacterium columnare from channel catfish (Ictalurus punctatus) Journal of Applied Microbiology. 104: 1302-1310. PMID 18005349 DOI: 10.1111/j.1365-2672.2007.03632.x  0.96
2007 Karsi A, Lawrence ML. Broad host range fluorescence and bioluminescence expression vectors for Gram-negative bacteria. Plasmid. 57: 286-95. PMID 17207855 DOI: 10.1016/j.plasmid.2006.11.002  0.96
2006 Karsi A, Menanteau-Ledouble S, Lawrence ML. Development of bioluminescent Edwardsiella ictaluri for noninvasive disease monitoring. Fems Microbiology Letters. 260: 216-23. PMID 16842347 DOI: 10.1111/j.1574-6968.2006.00310.x  0.96
2005 Karsi A, Wolters WR, Waldbieser GC. Assignment of immune-related genes to the channel catfish, Ictalurus punctatus, genetic map Animal Genetics. 36: 502-506. PMID 16293124 DOI: 10.1111/j.1365-2052.2005.01345.x  0.96
2005 Karsi A, Waldbieser GC, Small BC, Wolters WR. Genomic structure of the proopiomelanocortin gene and expression during acute low-water stress in channel catfish. General and Comparative Endocrinology. 143: 104-12. PMID 16061068 DOI: 10.1016/j.ygcen.2005.03.005  0.96
2005 Karsi A, Waldbieser GC. Linkage mapping of the channel catfish proopiomelanocortin (POMC) gene Animal Genetics. 36: 171-173. PMID 15771736 DOI: 10.1111/j.1365-2052.2005.01243.x  0.96
2004 Karsi A, Waldbieser GC, Small BC, Liu Z, Wolters WR. Molecular cloning of proopiomelanocortin cDNA and multi-tissue mRNA expression in channel catfish. General and Comparative Endocrinology. 137: 312-21. PMID 15201069 DOI: 10.1016/j.ygcen.2004.03.012  0.96
2004 Karsi A, Waldbieser GC. Partial cloning of the T-cell receptor-α gene and assignment of TRA and TRB genes to the catfish linkage map Animal Genetics. 35: 150-151. PMID 15025583 DOI: 10.1111/j.1365-2052.2004.01099.x  0.96
2003 Waldbieser GC, Quiniou SM, Karsi A. Rapid development of gene-tagged microsatellite markers from bacterial artificial chromosome clones using anchored TAA repeat primers. Biotechniques. 35: 976-9. PMID 14628671  0.96
2003 Liu Z, Karsi A, Li P, Cao D, Dunham R. An AFLP-based genetic linkage map of channel catfish (Ictalurus punctatus) constructed by using an interspecific hybrid resource family. Genetics. 165: 687-94. PMID 14573480  0.96
2003 Patterson A, Karsi A, Feng J, Liu Z. Translational machinery of channel catfish: II. Complementary DNA and expression of the complete set of 47 60S ribosomal proteins. Gene. 305: 151-60. PMID 12609735 DOI: 10.1016/S0378-1119(02)01183-6  0.96
2002 Kocabas AM, Li P, Cao D, Karsi A, He C, Patterson A, Ju Z, Dunham RA, Liu Z. Expression profile of the channel catfish spleen: analysis of genes involved in immune functions. Marine Biotechnology (New York, N.Y.). 4: 526-36. PMID 14961227 DOI: 10.1007/s10126-002-0067-0  0.96
2002 Karsi A, Patterson A, Feng J, Liu Z. Translational machinery of channel catfish: I. A transcriptomic approach to the analysis of 32 40S ribosomal protein genes and their expression. Gene. 291: 177-86. PMID 12095691 DOI: 10.1016/S0378-1119(02)00595-4  0.96
2002 Karsi A, Cao D, Li P, Patterson A, Kocabas A, Feng J, Ju Z, Mickett KD, Liu Z. Transcriptome analysis of channel catfish (Ictalurus punctatus): initial analysis of gene expression and microsatellite-containing cDNAs in the skin. Gene. 285: 157-68. PMID 12039042 DOI: 10.1016/S0378-1119(02)00414-6  0.96
2001 Karsi A, Moav B, Hackett P, Liu Z. Effects of insert size on transposition efficiency of the sleeping beauty transposon in mouse cells. Marine Biotechnology (New York, N.Y.). 3: 241-5. PMID 14961361 DOI: 10.1007/s101260000072  0.96
2001 Liu Z, Kim S, Karsi A. Channel catfish follicle-stimulating hormone and luteinizing hormone: complementary DNA cloning and expression during ovulation. Marine Biotechnology (New York, N.Y.). 3: 590-9. PMID 14961331 DOI: 10.1007/s1012601-0067-5  0.96
2001 Liu Z, Li P, Kocabas A, Karsi A, Ju Z. Microsatellite-containing genes from the channel catfish brain: evidence of trinucleotide repeat expansion in the coding region of nucleotide excision repair gene RAD23B. Biochemical and Biophysical Research Communications. 289: 317-24. PMID 11716474 DOI: 10.1006/bbrc.2001.5978  0.96
2001 Liu Z, Kim S, Kucuktas H, Karsi A. Multiple isoforms and an unusual cathodic isoform of creatine kinase from channel catfish (Ictalurus punctatus). Gene. 275: 207-15. PMID 11587847 DOI: 10.1016/S0378-1119(01)00679-5  0.96
2001 Cao D, Kocabas A, Ju Z, Karsi A, Li P, Patterson A, Liu Z. Transcriptome of channel catfish (Ictalurus punctatus): initial analysis of genes and expression profiles of the head kidney. Animal Genetics. 32: 169-88. PMID 11531695 DOI: 10.1046/j.1365-2052.2001.00753.x  0.96
2000 Ju Z, Karsi A, Kocabas A, Patterson A, Li P, Cao D, Dunham R, Liu Z. Transcriptome analysis of channel catfish (Ictalurus punctatus): genes and expression profile from the brain. Gene. 261: 373-82. PMID 11167026 DOI: 10.1016/S0378-1119(00)00491-1  0.96
2000 Kim S, Karsi A, Dunham RA, Liu Z. The skeletal muscle alpha-actin gene of channel catfish (Ictalurus punctatus) and its association with piscine specific SINE elements. Gene. 252: 173-81. PMID 10903449 DOI: 10.1016/S0378-1119(00)00198-0  0.96
1999 Tan G, Karsi A, Li P, Kim S, Zheng X, Kucuktas H, Argue BJ, Dunham RA, Liu ZJ. Polymorphic microsatellite markers in Ictalurus punctatus and related catfish species. Molecular Ecology. 8: 1758-60. PMID 10583842 DOI: 10.1046/j.1365-294X.1999.00723-3.x  0.96
1999 Liu Z, Karsi A, Dunham RA. Development of Polymorphic EST Markers Suitable for Genetic Linkage Mapping of Catfish. Marine Biotechnology (New York, N.Y.). 1: 437-0447. PMID 10525678  0.96
1999 Liu Z, Tan G, Kucuktas H, Li P, Karsi A, Yant DR, Dunham RA. High levels of conservation at microsatellite loci among ictalurid catfishes Journal of Heredity. 90: 307-312.  0.96
1998 Karsi A, Li P, Dunham RA, Liu ZJ. Transcriptional activities in the pituitaries of channel catfish before and after induced ovulation by injection of carp pituitary extract as revealed by expressed sequence tag analysis. Journal of Molecular Endocrinology. 21: 121-9. PMID 9801455  0.96
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