| Year |
Citation |
Score |
| 2024 |
Dewberry RJ, Sharma P, Prom JL, Kinscherf NA, Lowe-Power T, Mazloom R, Zhang X, Liu H, Arif M, Stulberg M, Heath LS, Eversole K, Beattie GA, Vinatzer BA, Allen C. Genotypic and Phenotypic Analyses Show Cool Virulence is a Quantitative Trait Not Restricted to "Race 3 biovar 2". Phytopathology. PMID 39186006 DOI: 10.1094/PHYTO-06-24-0187-R |
0.33 |
|
| 2024 |
Chuang SC, Dobhal S, Alvarez AM, Arif M. Three new species, sp. nov., sp. nov., and sp. nov., isolated from the Araceae family. Frontiers in Microbiology. 15: 1356025. PMID 38655077 DOI: 10.3389/fmicb.2024.1356025 |
0.727 |
|
| 2024 |
Chuang SC, Dobhal S, Pal K, Amore TD, Alvarez AM, Arif M. strains isolated from hosts in the Araceae reveal diverse phylogenetic relationships and origins. Phytopathology. PMID 38568984 DOI: 10.1094/PHYTO-08-23-0265-R |
0.722 |
|
| 2023 |
Klair D, Dobhal S, Ahmad A, Hassan ZU, Uyeda J, Silva J, Wang KH, Kim S, Alvarez AM, Arif M. Exploring taxonomic and functional microbiome of Hawaiian stream and spring irrigation water systems using Illumina and Oxford Nanopore sequencing platforms. Frontiers in Microbiology. 14: 1039292. PMID 36876060 DOI: 10.3389/fmicb.2023.1039292 |
0.723 |
|
| 2022 |
DeLude A, Wells R, Boomla S, Chuang SC, Urena F, Shipman A, Rubas N, Kuehu DL, Bickerton B, Peterson T, Dobhal S, Arizala D, Klair D, Ochoa-Corona F, Ali ME, ... ... Arif M, et al. Loop-mediated isothermal amplification (LAMP) assay for specific and rapid detection of Dickeya fangzhongdai targeting a unique genomic region. Scientific Reports. 12: 19193. PMID 36357509 DOI: 10.1038/s41598-022-22023-4 |
0.788 |
|
| 2022 |
Arizala D, Dobhal S, Alvarez AM, Arif M. Elevation of subsp. to species level as sp. nov., merging and re-classification of subsp. and subsp. as sp. nov. based on complete genome analyses. International Journal of Systematic and Evolutionary Microbiology. 72. PMID 36107753 DOI: 10.1099/ijsem.0.005427 |
0.744 |
|
| 2022 |
Arizala D, Dobhal S, Babler B, Crockford AB, Rioux RA, Alvarez AM, Arif M. Development of a multiplex TaqMan qPCR targeting unique genomic regions for the specific and sensitive detection of Pectobacterium species and P. parmentieri. Journal of Applied Microbiology. PMID 35026058 DOI: 10.1111/jam.15447 |
0.768 |
|
| 2021 |
Domingo R, Perez C, Klair D, Vu H, Candelario-Tochiki A, Wang X, Camson A, Uy JN, Salameh M, Arizala D, Dobhal S, Boluk G, Bingham JP, Ochoa-Corona F, Ali ME, ... ... Arif M, et al. Genome-informed loop-mediated isothermal amplification assay for specific detection of Pectobacterium parmentieri in infected potato tissues and soil. Scientific Reports. 11: 21948. PMID 34753982 DOI: 10.1038/s41598-021-01196-4 |
0.806 |
|
| 2021 |
Boluk G, Arizala D, Dobhal S, Zhang J, Hu J, Alvarez AM, Arif M. Genomic and Phenotypic Biology of Novel Strains of Isolated From Pineapple and Taro in Hawaii: Insights Into Genome Plasticity, Pathogenicity, and Virulence Determinants. Frontiers in Plant Science. 12: 663851. PMID 34456933 DOI: 10.3389/fpls.2021.663851 |
0.764 |
|
| 2021 |
Arif M, Busot GY, Mann R, Rodoni B, Stack JP. Field-Deployable Recombinase Polymerase Amplification Assay for Specific, Sensitive and Rapid Detection of the US Select Agent and Toxigenic Bacterium, . Biology. 10. PMID 34356474 DOI: 10.3390/biology10070620 |
0.428 |
|
| 2021 |
Larrea-Sarmiento A, Stack JP, Alvarez AM, Arif M. Multiplex recombinase polymerase amplification assay developed using unique genomic regions for rapid on-site detection of genus Clavibacter and C. nebraskensis. Scientific Reports. 11: 12017. PMID 34103568 DOI: 10.1038/s41598-021-91336-7 |
0.513 |
|
| 2021 |
Klair D, Silva J, Arizala ED, Boluk G, Dobhal S, Ahmad AA, Uyeda J, Alvarez AM, Arif M. First Report of Pectobacterium brasiliense causing soft rot on mizuna (Brassica rapa var. japonica) in the United States. Plant Disease. PMID 33970034 DOI: 10.1094/PDIS-03-21-0644-PDN |
0.767 |
|
| 2021 |
Arif M, Busot GY, Mann R, Rodoni B, Stack JP. Multiple internal controls enhance reliability for PCR and real time PCR detection of Rathayibacter toxicus. Scientific Reports. 11: 8365. PMID 33863977 DOI: 10.1038/s41598-021-87815-6 |
0.442 |
|
| 2021 |
Klair D, Boluk G, Silva J, Arizala ED, Dobhal S, Arif M. First Report of Bacterial Soft Rot Disease on Pak Choi (Brassica rapa subsp. chinensis) caused by Pectobacterium brasiliense in the United States. Plant Disease. PMID 33728952 DOI: 10.1094/PDIS-08-20-1854-PDN |
0.764 |
|
| 2021 |
Ramachandran S, Dobhal S, Alvarez AM, Arif M. Improved multiplex TaqMan qPCR assay with universal internal control offers reliable and accurate detection of Clavibacter michiganensis. Journal of Applied Microbiology. PMID 33484618 DOI: 10.1111/jam.15017 |
0.777 |
|
| 2020 |
Paudel S, Dobhal S, Alvarez AM, Arif M. Taxonomy and Phylogenetic Research on Ralstonia solanacearum Species Complex: A Complex Pathogen with Extraordinary Economic Consequences. Pathogens (Basel, Switzerland). 9. PMID 33113847 DOI: 10.3390/pathogens9110886 |
0.733 |
|
| 2020 |
Andreason SA, Arif M, Brown JK, Ochoa-Corona F, Wayadande A. Exploring the Use of High-Resolution Melting Analysis and Helicase-Dependent Amplification for Discrimination of Bemisia tabaci (Hemiptera: Aleyrodidae) Cryptic Species and Trialeurodes vaporariorum. Journal of Economic Entomology. PMID 32841358 DOI: 10.1093/Jee/Toaa180 |
0.387 |
|
| 2020 |
Boluk G, Dobhal S, Crockford AB, Melzer M, Alvarez AM, Arif M. Genome-Informed Recombinase Polymerase Amplification Assay Coupled with a Lateral Flow Device for In-Field Detection of Species. Plant Disease. PDIS09191988RE. PMID 32530731 DOI: 10.1094/Pdis-09-19-1988-Re |
0.808 |
|
| 2020 |
Dobhal S, Boluk G, Babler B, Stulberg MJ, Rascoe J, Nakhla M, Chapman TA, Crockford AB, Melzer M, Alvarez AM, Arif M. Comparative genomics reveals signature regions used to develop a robust and sensitive multiplex TaqMan real-time qPCR assay to detect the genus Dickeya and Dickeya dianthicola. Journal of Applied Microbiology. PMID 31950553 DOI: 10.1111/Jam.14579 |
0.797 |
|
| 2020 |
Arizala D, Dobhal S, Paudel S, Gunarathne S, Boluk G, Arif M. First report of bacterial soft rot and blackleg on potato caused by Pectobacterium parmentieri in Hawaii. Plant Disease. 104: 970-970. DOI: 10.1094/Pdis-09-19-1894-Pdn |
0.512 |
|
| 2020 |
Arizala D, Dobhal S, Paudel S, Boluk G, Silva J, Ahmad AA, Uyeda J, Sugano J, Alvarez AM, Arif M. First Report of Pectobacterium brasiliense Causing Bacterial Soft Rot and Blackleg Diseases of Potato in Hawaii Plant Disease. 104: 2515-2515. DOI: 10.1094/Pdis-02-20-0395-Pdn |
0.307 |
|
| 2019 |
Arizala D, Arif M. Genome-Wide Analyses Revealed Remarkable Heterogeneity in Pathogenicity Determinants, Antimicrobial Compounds, and CRISPR-Cas Systems of Complex Phytopathogenic Genus . Pathogens (Basel, Switzerland). 8. PMID 31756888 DOI: 10.3390/Pathogens8040247 |
0.402 |
|
| 2019 |
Dhakal U, Dobhal S, Alvarez AM, Arif M. Phylogenetic Analyses of Xanthomonads Causing Bacterial Leaf Spot of Tomato and Pepper: Revealed Homologous Populations Despite Distant Geographical Distribution. Microorganisms. 7. PMID 31623235 DOI: 10.3390/microorganisms7100462 |
0.741 |
|
| 2019 |
Larrea-Sarmiento A, Alvarez AM, Stack JP, Arif M. Synergetic effect of non-complementary 5' AT-rich sequences on the development of a multiplex TaqMan real-time PCR for specific and robust detection of Clavibacter michiganensis and C. michiganensis subsp. nebraskensis. Plos One. 14: e0218530. PMID 31295263 DOI: 10.1371/Journal.Pone.0218530 |
0.466 |
|
| 2019 |
Ocenar J, Arizala D, Boluk G, Dhakal U, Gunarathne S, Paudel S, Dobhal S, Arif M. Development of a robust, field-deployable loop-mediated isothermal amplification (LAMP) assay for specific detection of potato pathogen Dickeya dianthicola targeting a unique genomic region. Plos One. 14: e0218868. PMID 31233546 DOI: 10.1371/Journal.Pone.0218868 |
0.792 |
|
| 2018 |
Ahmed FA, Larrea-Sarmiento A, Alvarez AM, Arif M. Genome-informed diagnostics for specific and rapid detection of Pectobacterium species using recombinase polymerase amplification coupled with a lateral flow device. Scientific Reports. 8: 15972. PMID 30374117 DOI: 10.1038/S41598-018-34275-0 |
0.573 |
|
| 2018 |
Dobhal S, Larrea-Sarmiento A, Alvarez AM, Arif M. Development of a loop-mediated isothermal amplification assay for specific detection of all known subspecies of Clavibacter michiganensis. Journal of Applied Microbiology. PMID 30307676 DOI: 10.1111/Jam.14128 |
0.783 |
|
| 2018 |
Larrea-Sarmiento A, Dhakal U, Boluk G, Fatdal L, Alvarez A, Strayer-Scherer A, Paret M, Jones J, Jenkins D, Arif M. Development of a genome-informed loop-mediated isothermal amplification assay for rapid and specific detection of Xanthomonas euvesicatoria. Scientific Reports. 8: 14298. PMID 30250161 DOI: 10.1038/S41598-018-32295-4 |
0.494 |
|
| 2017 |
Ahmed FA, Arif M, Alvarez AM. Antibacterial Effect of Potassium Tetraborate Tetrahydrate against Soft Rot Disease Agent Pectobacterium carotovorum in Tomato. Frontiers in Microbiology. 8: 1728. PMID 28955313 DOI: 10.3389/Fmicb.2017.01728 |
0.351 |
|
| 2017 |
Yasuhara-Bell JH, Marrero G, Arif M, de Silva A, Alvarez A. Development of a Loop-Mediated Isothermal Amplification (LAMP) assay for the detection of Dickeya spp. Phytopathology. PMID 28697662 DOI: 10.1094/Phyto-04-17-0160-R |
0.536 |
|
| 2017 |
Andreason SA, Arif M, Brown JK, Ochoa-Corona F, Fletcher J, Wayadande A. Single-Target and Multiplex Discrimination of Whiteflies (Hemiptera: Aleyrodidae) Bemisia tabaci and Trialeurodes vaporariorum With Modified Priming Oligonucleotide Thermodynamics. Journal of Economic Entomology. PMID 28498951 DOI: 10.1093/Jee/Tox125 |
0.443 |
|
| 2016 |
Arif M, Busot GY, Mann R, Rodoni B, Liu S, Stack JP. Emergence of a New Population of Rathayibacter toxicus: An Ecologically Complex, Geographically Isolated Bacterium. Plos One. 11: e0156182. PMID 27219107 DOI: 10.1371/Journal.Pone.0156182 |
0.441 |
|
| 2016 |
Dobhal S, Olson JD, Arif M, Suarez JA, Ochoa-Corona FM. A simplified strategy for sensitive detection of Rose rosette virus compatible with three RT-PCR chemistries. Journal of Virological Methods. PMID 26850142 DOI: 10.1016/J.Jviromet.2016.01.013 |
0.789 |
|
| 2015 |
Arif M, Opit G, Mendoza-Yerbafría A, Dobhal S, Li Z, Ku?erová Z, Ochoa-Corona FM. Array of Synthetic Oligonucleotides to Generate Unique Multi-Target Artificial Positive Controls and Molecular Probe-Based Discrimination of Liposcelis Species. Plos One. 10: e0129810. PMID 26086728 DOI: 10.1371/Journal.Pone.0129810 |
0.757 |
|
| 2015 |
Arif M, Zaidi NW, Haq QM, Singh YP, Taj G, Kar CS, Singh US. Morphological and comparative genomic analyses of pathogenic and non-pathogenic Fusarium solani isolated from Dalbergia sissoo. Molecular Biology Reports. 42: 1107-22. PMID 25605046 DOI: 10.1007/S11033-014-3849-3 |
0.441 |
|
| 2015 |
Rayar JK, Arif M, Singh US. Relative efficiency of RAPD and ISSR markers in assessment of DNA polymorphism and genetic diversity among Pseudomonas strains African Journal of Biotechnology. 14: 1097-1106. DOI: 10.5897/Ajb10.1951 |
0.33 |
|
| 2015 |
Dobhal S, Arif M, Olson J, Mendoza-Yerbafría A, Aguilar-Moreno S, Perez-Garcia M, Ochoa-Corona FM. Sensitive detection and discrimination method for studying multiple infections of five major plant viruses infecting ornamental plants in nursery environments Annals of Applied Biology. 166: 286-296. DOI: 10.1111/Aab.12182 |
0.773 |
|
| 2014 |
Arif M, Dobhal S, Garrido PA, Orquera GK, Espíndola AS, Young CA, Ochoa-Corona FM, Marek SM, Garzón CD. Highly Sensitive End-Point PCR and SYBR Green qPCR Detection of Phymatotrichopsis omnivora, Causal Fungus of Cotton Root Rot. Plant Disease. 98: 1205-1212. PMID 30699612 DOI: 10.1094/Pdis-05-13-0505-Re |
0.709 |
|
| 2014 |
Arif M, Aguilar-Moreno GS, Wayadande A, Fletcher J, Ochoa-Corona FM. Primer modification improves rapid and sensitive in vitro and field-deployable assays for detection of high plains virus variants Applied and Environmental Microbiology. 80: 320-327. PMID 24162574 DOI: 10.1128/Aem.02340-13 |
0.512 |
|
| 2013 |
Ouyang P, Arif M, Fletcher J, Melcher U, Ochoa Corona FM. Enhanced reliability and accuracy for field deployable bioforensic detection and discrimination of Xylella fastidiosa subsp. pauca, causal agent of citrus variegated chlorosis using razor ex technology and TaqMan quantitative PCR. Plos One. 8: e81647. PMID 24312333 DOI: 10.1371/Journal.Pone.0081647 |
0.545 |
|
| 2013 |
Caasi DR, Arif M, Payton M, Melcher U, Winder L, Ochoa-Corona FM. A multi-target, non-infectious and clonable artificial positive control for routine PCR-based assays. Journal of Microbiological Methods. 95: 229-34. PMID 24013035 DOI: 10.1016/J.Mimet.2013.08.017 |
0.459 |
|
| 2013 |
Arif M, Fletcher J, Marek SM, Melcher U, Ochoa-Corona FM. Development of a rapid, sensitive, and field-deployable razor ex BioDetection system and quantitative PCR assay for detection of Phymatotrichopsis omnivora using multiple gene targets. Applied and Environmental Microbiology. 79: 2312-20. PMID 23354717 DOI: 10.1128/Aem.03239-12 |
0.555 |
|
| 2013 |
Arif M, Ochoa-Corona FM. Comparative assessment of 5' A/T-rich overhang sequences with optimal and sub-optimal primers to increase PCR yields and sensitivity. Molecular Biotechnology. 55: 17-26. PMID 23117543 DOI: 10.1007/S12033-012-9617-5 |
0.343 |
|
| 2013 |
Arif M, Zaidi NW, Haq QMR, Singh YP, Khan S, Singh US. Molecular phylogeny and pathotyping of Fusarium solani: A causal agent of Dalbergia sissoo decline Forest Pathology. 43: 478-487. DOI: 10.1111/Efp.12060 |
0.453 |
|
| 2012 |
Arif M, Chawla S, Zaidi NW, Rayar JK, Variar M, Singh US. Development of specific primers for genus Fusarium and F. solani using rDNA sub-unit and transcription elongation factor (TEF-1α) gene African Journal of Biotechnology. 11: 444-447. DOI: 10.5897/Ajb10.489 |
0.485 |
|
| 2012 |
Arif M, Ochoa-Corona FM, Opit GP, Li ZH, Kucerová Z, Stejskal V, Yang QQ. Corrigendum to "PCR and isothermal-based molecular identification of the stored-product psocid pest Lepinotus reticulatus (Psocoptera: Trogiidae)" [J. Stored Prod. Res. 49 (2012) 184-188] Journal of Stored Products Research. 50: 27. DOI: 10.1016/J.Jspr.2012.04.003 |
0.328 |
|
| 2012 |
Arif M, Ochoa-Corona FM, Opit GP, Li ZH, Kučerová Z, Stejskal V, Yang QQ. PCR and isothermal-based molecular identification of the stored-product psocid pest Lepinotus reticulatus (Psocoptera: Trogiidae) Journal of Stored Products Research. 49: 184-188. DOI: 10.1016/J.Jspr.2012.02.001 |
0.469 |
|
| 2011 |
Arif M, Pani DR, Zaidi NW, Singh US. PCR-Based Identification and Characterization of Fusarium sp. Associated with Mango Malformation. Biotechnology Research International. 2011: 141649. PMID 21350657 DOI: 10.4061/2011/141649 |
0.428 |
|
| 2009 |
Arocha Y, Singh A, Pandey M, Tripathi AN, Chandra B, Shukla SK, Singh Y, Kumar A, Srivastava RK, Zaidi NW, Arif M, Narwal S, Tewari AK, Gupta MK, Nath PD, et al. New plant hosts for group 16SrII, ‘Candidatus Phytoplasma aurantifolia’, in India Plant Pathology. 58: 391-391. DOI: 10.1111/J.1365-3059.2008.01969.X |
0.366 |
|
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