Sanzhen Liu - Publications

2010 Kansas State University, Manhattan, KS, United States 

49 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Lin G, He C, Zheng J, Koo DH, Le H, Zheng H, Tamang TM, Lin J, Liu Y, Zhao M, Hao Y, McFraland F, Wang B, Qin Y, Tang H, ... ... Liu S, et al. Chromosome-level genome assembly of a regenerable maize inbred line A188. Genome Biology. 22: 175. PMID 34108023 DOI: 10.1186/s13059-021-02396-x  0.64
2021 Tamang TM, Sprague SA, Kakeshpour T, Liu S, White FF, Park S. Ectopic Expression of a Heterologous Glutaredoxin Enhances Drought Tolerance and Grain Yield in Field Grown Maize. International Journal of Molecular Sciences. 22. PMID 34069397 DOI: 10.3390/ijms22105331  0.32
2020 He C, Lin G, Wei H, Tang H, White FF, Valent B, Liu S. Factorial estimating assembly base errors using -mer abundance difference (KAD) between short reads and genome assembled sequences. Nar Genomics and Bioinformatics. 2: lqaa075. PMID 33575622 DOI: 10.1093/nargab/lqaa075  0.32
2020 Ji C, Ji Z, Liu B, Cheng H, Liu H, Liu S, Yang B, Chen G. Allelic Genes Activate Rice Blight Resistance Suppressed by Interfering TAL Effectors. Plant Communications. 1: 100087. PMID 33367250 DOI: 10.1016/j.xplc.2020.100087  0.36
2020 Xie J, Guo G, Wang Y, Hu T, Wang L, Li J, Qiu D, Li Y, Wu Q, Lu P, Chen Y, Dong L, Li M, Zhang H, Zhang P, ... ... Liu S, et al. A rare single nucleotide variant in Pm5e confers powdery mildew resistance in common wheat. The New Phytologist. PMID 32569398 DOI: 10.1111/Nph.16762  0.4
2020 Miao C, Xu Y, Liu S, Schnable PS, Schnable J. Increased power and accuracy of causal locus identification in time-series genome-wide association in sorghum. Plant Physiology. PMID 32461303 DOI: 10.1104/Pp.20.00277  0.64
2020 He C, Du Y, Fu J, Zeng E, Park S, White F, Zheng J, Liu S. Early Drought-Responsive Genes Are Variable and Relevant to Drought Tolerance. G3 (Bethesda, Md.). PMID 32161086 DOI: 10.1534/G3.120.401199  0.36
2019 Peng Z, Oliveira-Garcia E, Lin G, Hu Y, Dalby M, Migeon P, Tang H, Farman M, Cook D, White FF, Valent B, Liu S. Effector gene reshuffling involves dispensable mini-chromosomes in the wheat blast fungus. Plos Genetics. 15: e1008272. PMID 31513573 DOI: 10.1371/Journal.Pgen.1008272  0.32
2019 Zheng J, Zeng E, Du Y, He C, Hu Y, Jiao Z, Wang K, Li W, Ludens M, Fu J, Wang H, White FF, Wang G, Liu S. Temporal Small RNA Expression Profiling under Drought Reveals a Potential Regulatory Role of Small Nucleolar RNAs in the Drought Responses of Maize. The Plant Genome. 12. PMID 30951096 DOI: 10.3835/Plantgenome2018.08.0058  0.36
2019 Li L, Du Y, He C, Dietrich CR, Li J, Ma X, Wang R, Liu Q, Liu S, Wang G, Schnable PS, Zheng J. The maize glossy6 gene is involved in cuticular wax deposition and drought tolerance. Journal of Experimental Botany. PMID 30919902 DOI: 10.1093/Jxb/Erz131  0.64
2018 Zheng J, He C, Qin Y, Lin G, Park WD, Sun M, Li J, Lu X, Zhang C, Yeh CT, Gunasekara CJ, Zeng E, Wei H, Schnable PS, Wang G, ... Liu S, et al. Co-expression Analysis Aids in the Identification of Genes in the Cuticular Wax Pathway in Maize. The Plant Journal : For Cell and Molecular Biology. PMID 30375131 DOI: 10.1111/Tpj.14140  0.64
2018 Guo H, Nolan TM, Song G, Liu S, Xie Z, Chen J, Schnable PS, Walley JW, Yin Y. FERONIA Receptor Kinase Contributes to Plant Immunity by Suppressing Jasmonic Acid Signaling in Arabidopsis thaliana. Current Biology : Cb. PMID 30270181 DOI: 10.1016/J.Cub.2018.07.078  0.64
2018 Liu S, Schnable JC, Ott A, Eddy Yeh CT, Springer NM, Yu J, Muehlbauer G, Timmermans MCP, Scanlon MJ, Schnable PS. Intragenic Meiotic Crossovers Generate Novel Alleles with Transgressive Expression Levels. Molecular Biology and Evolution. PMID 30184112 DOI: 10.1093/Molbev/Msy174  0.64
2018 Li L, Petsch K, Shimizu R, Liu S, Xu WW, Ying K, Yu J, Scanlon MJ, Schnable PS, Timmermans MCP, Springer NM, Muehlbauer GJ. Correction: Mendelian and Non-Mendelian Regulation of Gene Expression in Maize. Plos Genetics. 14: e1007234. PMID 29444085 DOI: 10.1371/Journal.Pgen.1007234  0.64
2017 Lin HY, Liu Q, Li X, Yang J, Liu S, Huang Y, Scanlon MJ, Nettleton D, Schnable PS. Substantial contribution of genetic variation in the expression of transcription factors to phenotypic variation revealed by eRD-GWAS. Genome Biology. 18: 192. PMID 29041960 DOI: 10.1186/S13059-017-1328-6  0.64
2017 Ott A, Liu S, Schnable JC, Yeh C', Wang KS, Schnable PS. tGBS® genotyping-by-sequencing enables reliable genotyping of heterozygous loci. Nucleic Acids Research. PMID 29036322 DOI: 10.1093/Nar/Gkx853  0.64
2017 Mei W, Liu S, Schnable JC, Yeh CT, Springer NM, Schnable PS, Barbazuk WB. A Comprehensive Analysis of Alternative Splicing in Paleopolyploid Maize. Frontiers in Plant Science. 8: 694. PMID 28539927 DOI: 10.3389/Fpls.2017.00694  0.64
2017 Ye H, Liu S, Tang B, Chen J, Xie Z, Nolan TM, Jiang H, Guo H, Lin HY, Li L, Wang Y, Tong H, Zhang M, Chu C, Li Z, et al. RD26 mediates crosstalk between drought and brassinosteroid signalling pathways. Nature Communications. 8: 14573. PMID 28233777 DOI: 10.1038/Ncomms14573  0.64
2017 Liu S, Zheng J, Migeon P, Ren J, Hu Y, He C, Liu H, Fu J, White FF, Toomajian C, Wang G. Unbiased K-mer Analysis Reveals Changes in Copy Number of Highly Repetitive Sequences During Maize Domestication and Improvement. Scientific Reports. 7: 42444. PMID 28186206 DOI: 10.1038/Srep42444  0.36
2017 Nolan T, Liu S, Guo H, Li L, Schnable P, Yin Y. Identification of Brassinosteroid Target Genes by Chromatin Immunoprecipitation Followed by High-Throughput Sequencing (ChIP-seq) and RNA-Sequencing. Methods in Molecular Biology (Clifton, N.J.). 1564: 63-79. PMID 28124247 DOI: 10.1007/978-1-4939-6813-8_7  0.32
2016 Li L, Hey S, Liu S, Liu Q, McNinch C, Hu HC, Wen TJ, Marcon C, Paschold A, Bruce W, Schnable PS, Hochholdinger F. Characterization of maize roothairless6 which encodes a D-type cellulose synthase and controls the switch from bulge formation to tip growth. Scientific Reports. 6: 34395. PMID 27708345 DOI: 10.1038/Srep34395  0.64
2016 Zhang J, Carlos Huguet Tapia J, Hu Y, Jones J, Wang N, Liu S, White FF. Homologs of CsLOB1 in citrus function as disease susceptibility genes in citrus canker. Molecular Plant Pathology. PMID 27276658 DOI: 10.1111/Mpp.12441  0.12
2016 Chen MS, Liu S, Wang H, Cheng X, El Bouhssini M, Whitworth RJ. Massive Shift in Gene Expression during Transitions between Developmental Stages of the Gall Midge, Mayetiola Destructor. Plos One. 11: e0155616. PMID 27224654 DOI: 10.1371/Journal.Pone.0155616  0.08
2016 Huguet-Tapia JC, Peng Z, Yang B, Yin Z, Liu S, White FF. Complete Genome Sequence of the African Strain AXO1947 of Xanthomonas oryzae pv. oryzae. Genome Announcements. 4. PMID 26868406 DOI: 10.1128/Genomea.01730-15  0.36
2016 Peng Z, Hu Y, Xie J, Potnis N, Akhunova A, Jones J, Liu Z, White FF, Liu S. Long read and single molecule DNA sequencing simplifies genome assembly and TAL effector gene analysis of Xanthomonas translucens. Bmc Genomics. 17: 21. PMID 26729225 DOI: 10.1186/S12864-015-2348-9  0.64
2015 Zhang Y, Paschold A, Marcon C, Liu S, Tai H, Nestler J, Yeh CT, Opitz N, Lanz C, Schnable PS, Hochholdinger F. The Aux/IAA gene rum1 involved in seminal and lateral root formation controls vascular patterning in maize (Zea mays L.) primary roots. Journal of Experimental Botany. 66: 6081. PMID 26208643 DOI: 10.1093/jxb/erv354  0.64
2015 Zhou J, Peng Z, Long J, Sosso D, Liu B, Eom JS, Huang S, Liu S, Vera Cruz C, Frommer WB, White FF, Yang B. Gene targeting by the TAL effector PthXo2 reveals cryptic resistance gene for bacterial blight of rice. The Plant Journal : For Cell and Molecular Biology. 82: 632-43. PMID 25824104 DOI: 10.1111/Tpj.12838  0.36
2015 Li L, Hill-Skinner S, Liu S, Beuchle D, Tang HM, Yeh CT, Nettleton D, Schnable PS. The maize brown midrib4 (bm4) gene encodes a functional folylpolyglutamate synthase. The Plant Journal : For Cell and Molecular Biology. 81: 493-504. PMID 25495051 DOI: 10.1111/Tpj.12745  0.64
2014 Zhang Y, Paschold A, Marcon C, Liu S, Tai H, Nestler J, Yeh CT, Opitz N, Lanz C, Schnable PS, Hochholdinger F. The Aux/IAA gene rum1 involved in seminal and lateral root formation controls vascular patterning in maize (Zea mays L.) primary roots. Journal of Experimental Botany. 65: 4919-30. PMID 24928984 DOI: 10.1093/Jxb/Eru249  0.64
2014 Nestler J, Liu S, Wen TJ, Paschold A, Marcon C, Tang HM, Li D, Li L, Meeley RB, Sakai H, Bruce W, Schnable PS, Hochholdinger F. Roothairless5, which functions in maize (Zea mays L.) root hair initiation and elongation encodes a monocot-specific NADPH oxidase. The Plant Journal : For Cell and Molecular Biology. 79: 729-40. PMID 24902980 DOI: 10.1111/Tpj.12578  0.64
2014 Wang X, Chen J, Xie Z, Liu S, Nolan T, Ye H, Zhang M, Guo H, Schnable PS, Li Z, Yin Y. Histone lysine methyltransferase SDG8 is involved in brassinosteroid-regulated gene expression in Arabidopsis thaliana. Molecular Plant. 7: 1303-15. PMID 24838002 DOI: 10.1093/Mp/Ssu056  0.64
2014 Cai W, Wang C, Li Y, Yao C, Shen L, Liu S, Bao X, Schnable PS, Girton J, Johansen J, Johansen KM. Genome-wide analysis of regulation of gene expression and H3K9me2 distribution by JIL-1 kinase mediated histone H3S10 phosphorylation in Drosophila. Nucleic Acids Research. 42: 5456-67. PMID 24598257 DOI: 10.1093/Nar/Gku173  0.64
2014 Tang HM, Liu S, Hill-Skinner S, Wu W, Reed D, Yeh CT, Nettleton D, Schnable PS. The maize brown midrib2 (bm2) gene encodes a methylenetetrahydrofolate reductase that contributes to lignin accumulation. The Plant Journal : For Cell and Molecular Biology. 77: 380-92. PMID 24286468 DOI: 10.1111/Tpj.12394  0.64
2013 Li L, Li D, Liu S, Ma X, Dietrich CR, Hu HC, Zhang G, Liu Z, Zheng J, Wang G, Schnable PS. The maize glossy13 gene, cloned via BSR-Seq and Seq-walking encodes a putative ABC transporter required for the normal accumulation of epicuticular waxes. Plos One. 8: e82333. PMID 24324772 DOI: 10.1371/Journal.Pone.0082333  0.64
2013 Liu S, Hsia AP, Schnable PS. Digestion-ligation-amplification (DLA): a simple genome walking method to amplify unknown sequences flanking mutator (Mu) transposons and thereby facilitate gene cloning. Methods in Molecular Biology (Clifton, N.J.). 1057: 167-76. PMID 23918428 DOI: 10.1007/978-1-62703-568-2_12  0.64
2013 Li L, Petsch K, Shimizu R, Liu S, Xu WW, Ying K, Yu J, Scanlon MJ, Schnable PS, Timmermans MC, Springer NM, Muehlbauer GJ. Mendelian and non-Mendelian regulation of gene expression in maize. Plos Genetics. 9: e1003202. PMID 23341782 DOI: 10.1371/Journal.Pgen.1003202  0.64
2012 Liu S, Ying K, Yeh CT, Yang J, Swanson-Wagner R, Wu W, Richmond T, Gerhardt DJ, Lai J, Springer N, Nettleton D, Jeddeloh JA, Schnable PS. Changes in genome content generated via segregation of non-allelic homologs. The Plant Journal : For Cell and Molecular Biology. 72: 390-9. PMID 22731681 DOI: 10.1111/J.1365-313X.2012.05087.X  0.64
2012 Liu S, Yeh CT, Tang HM, Nettleton D, Schnable PS. Gene mapping via bulked segregant RNA-Seq (BSR-Seq). Plos One. 7: e36406. PMID 22586469 DOI: 10.1371/Journal.Pone.0036406  0.64
2011 Eichten SR, Swanson-Wagner RA, Schnable JC, Waters AJ, Hermanson PJ, Liu S, Yeh CT, Jia Y, Gendler K, Freeling M, Schnable PS, Vaughn MW, Springer NM. Heritable epigenetic variation among maize inbreds. Plos Genetics. 7: e1002372. PMID 22125494 DOI: 10.1371/Journal.Pgen.1002372  0.64
2011 Eichten SR, Foerster JM, de Leon N, Kai Y, Yeh CT, Liu S, Jeddeloh JA, Schnable PS, Kaeppler SM, Springer NM. B73-Mo17 near-isogenic lines demonstrate dispersed structural variation in maize. Plant Physiology. 156: 1679-90. PMID 21705654 DOI: 10.1104/Pp.111.174748  0.64
2010 Liu S, Chen HD, Makarevitch I, Shirmer R, Emrich SJ, Dietrich CR, Barbazuk WB, Springer NM, Schnable PS. High-throughput genetic mapping of mutants via quantitative single nucleotide polymorphism typing. Genetics. 184: 19-26. PMID 19884313 DOI: 10.1534/Genetics.109.107557  0.64
2009 Liu S, Yeh CT, Ji T, Ying K, Wu H, Tang HM, Fu Y, Nettleton D, Schnable PS. Mu transposon insertion sites and meiotic recombination events co-localize with epigenetic marks for open chromatin across the maize genome. Plos Genetics. 5: e1000733. PMID 19936291 DOI: 10.1371/Journal.Pgen.1000733  0.64
2009 Liu S, Dietrich CR, Schnable PS. DLA-based strategies for cloning insertion mutants: cloning the gl4 locus of maize using Mu transposon tagged alleles. Genetics. 183: 1215-25. PMID 19805815 DOI: 10.1534/Genetics.109.108936  0.64
2005 Wang Y, Li Y, Liu S, Shen W, Jiang B, Xu X, Xie Y. Study on the dynamic behavior of a DNA microarray. Journal of Nanoscience and Nanotechnology. 5: 1249-55. PMID 16193987 DOI: 10.1166/jnn.2005.218  0.4
2005 Liu S, Li Y, Fu X, Qiu M, Jiang B, Wu H, Li R, Mao Y, Xie Y. Analysis of the factors affecting the accuracy of detection for single base alterations by oligonucleotide microarray. Experimental & Molecular Medicine. 37: 71-7. PMID 15886519 DOI: 10.1038/emm.2005.10  0.44
2005 Guo Y, Tan J, Li R, Liu S, Li Y, Ying K, Xie Y, Mao Y. [Impacts of donor and recipient's SNP of cytokine and cytokine receptor on early acute renal allograft rejection]. National Medical Journal of China. 85: 3126-3133. DOI: 10.3760/J:Issn:0376-2491.2005.44.011  0.44
2005 Guo Y, Tan J, Li R, Liu S, Li Y, Ying K, Xie Y, Mao Y. Application of oligonucleotide array in single nucleotide polymorphism typing of cytokines and cytokine receptors National Medical Journal of China. 85: 1757-1761. DOI: 10.3760/J:Issn:0376-2491.2005.25.008  0.44
2004 Wei Q, Liu S, Huang J, Mao X, Chu X, Wang Y, Qiu M, Mao Y, Xie Y, Li Y. Comparison of hybridization behavior between double and single strands of targets and the application of asymmetric PCR targets in cDNA microarray. Journal of Biochemistry and Molecular Biology. 37: 439-44. PMID 15469731 DOI: 10.5483/Bmbrep.2004.37.4.439  0.4
2004 Li Y, Li T, Liu S, Qiu M, Han Z, Jiang Z, Li R, Ying K, Xie Y, Mao Y. Systematic comparison of the fidelity of aRNA, mRNA and T-RNA on gene expression profiling using cDNA microarray. Journal of Biotechnology. 107: 19-28. PMID 14687968 DOI: 10.1016/J.Jbiotec.2003.09.008  0.44
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