| Year |
Citation |
Score |
| 2023 |
de-Dios T, Scheib CL, Houldcroft CJ. An adagio for viruses, played out on ancient DNA. Genome Biology and Evolution. PMID 36930529 DOI: 10.1093/gbe/evad047 |
0.41 |
|
| 2022 |
Guellil M, van Dorp L, Inskip SA, Dittmar JM, Saag L, Tambets K, Hui R, Rose A, D'Atanasio E, Kriiska A, Varul L, Koekkelkoren AMHC, Goldina RD, Cessford C, Solnik A, ... ... Houldcroft CJ, et al. Ancient herpes simplex 1 genomes reveal recent viral structure in Eurasia. Science Advances. 8: eabo4435. PMID 35895820 DOI: 10.1126/sciadv.abo4435 |
0.393 |
|
| 2021 |
Pimenoff VN, Houldcroft CJ. How infectious diseases arrived in the colonial Americas. Elife. 10. PMID 34499030 DOI: 10.7554/eLife.72791 |
0.302 |
|
| 2021 |
Venturini C, Houldcroft CJ, Lazareva A, Wegner F, Morfopoulou S, Amrolia PJ, Golwala Z, Rao A, Marks SD, Simmonds J, Yoshikawa T, Farrell PJ, Cohen JI, Worth AJ, Breuer J. Epstein-Barr virus (EBV) deletions as biomarkers of response to treatment of chronic active EBV. British Journal of Haematology. PMID 34431085 DOI: 10.1111/bjh.17790 |
0.366 |
|
| 2021 |
van Dorp L, Houldcroft CJ, Richard D, Balloux F. COVID-19, the first pandemic in the post-genomic era. Current Opinion in Virology. 50: 40-48. PMID 34352474 DOI: 10.1016/j.coviro.2021.07.002 |
0.331 |
|
| 2021 |
Myers CE, Houldcroft CJ, Roy S, Margetts BK, Best T, Venturini C, Guerra-Assunção JA, Williams CA, Williams R, Dunn H, Hartley JC, Rao K, Rolfe KJ, Breuer J. Using Whole Genome Sequences to Investigate Adenovirus Outbreaks in a Hematopoietic Stem Cell Transplant Unit. Frontiers in Microbiology. 12: 667790. PMID 34276599 DOI: 10.3389/fmicb.2021.667790 |
0.317 |
|
| 2020 |
Meredith LW, Hamilton WL, Warne B, Houldcroft CJ, Hosmillo M, Jahun AS, Curran MD, Parmar S, Caller LG, Caddy SL, Khokhar FA, Yakovleva A, Hall G, Feltwell T, Forrest S, et al. Rapid implementation of SARS-CoV-2 sequencing to investigate cases of health-care associated COVID-19: a prospective genomic surveillance study. The Lancet. Infectious Diseases. PMID 32679081 DOI: 10.1016/S1473-3099(20)30562-4 |
0.364 |
|
| 2020 |
Houldcroft CJ, Jackson SE, Lim EY, Sedikides GX, Davies EL, Atkinson C, McIntosh M, Remmerswaal EBM, Okecha G, Bemelman FJ, Stanton RJ, Reeves M, Wills MR. Assessing Anti-HCMV Cell Mediated Immune Responses in Transplant Recipients and Healthy Controls Using a Novel Functional Assay. Frontiers in Cellular and Infection Microbiology. 10: 275. PMID 32670891 DOI: 10.3389/Fcimb.2020.00275 |
0.304 |
|
| 2020 |
Mavian C, Pond SK, Marini S, Magalis BR, Vandamme AM, Dellicour S, Scarpino SV, Houldcroft C, Villabona-Arenas J, Paisie TK, Trovão NS, Boucher C, Zhang Y, Scheuermann RH, Gascuel O, et al. Sampling bias and incorrect rooting make phylogenetic network tracing of SARS-COV-2 infections unreliable. Proceedings of the National Academy of Sciences of the United States of America. PMID 32381734 DOI: 10.1073/Pnas.2007295117 |
0.423 |
|
| 2019 |
Houldcroft CJ, Cudini J, Goldstein RA, Breuer J. Reply to Jensen and Kowalik: Consideration of mixed infections is central to understanding HCMV intrahost diversity. Proceedings of the National Academy of Sciences of the United States of America. PMID 31874929 DOI: 10.1073/Pnas.1918955117 |
0.381 |
|
| 2019 |
Houldcroft CJ. Human Herpesvirus Sequencing in the Genomic Era: The Growing Ranks of the Herpetic Legion. Pathogens (Basel, Switzerland). 8. PMID 31614759 DOI: 10.3390/Pathogens8040186 |
0.487 |
|
| 2019 |
Cudini J, Roy S, Houldcroft CJ, Bryant JM, Depledge DP, Tutill H, Veys P, Williams R, Worth AJJ, Tamuri AU, Goldstein RA, Breuer J. Human cytomegalovirus haplotype reconstruction reveals high diversity due to superinfection and evidence of within-host recombination. Proceedings of the National Academy of Sciences of the United States of America. PMID 30819890 DOI: 10.1073/Pnas.1818130116 |
0.476 |
|
| 2018 |
Houldcroft CJ, Beale MA, Sayeed MA, Qadri F, Dougan G, Mutreja A. Identification of novel adenovirus genotype 90 in children from Bangladesh. Microbial Genomics. PMID 30248001 DOI: 10.1099/mgen.0.000221 |
0.358 |
|
| 2018 |
Depledge DP, Cudini J, Kundu S, Atkinson C, Brown JR, Haque T, Houldcroft CJ, Koay ES, McGill F, Milne R, Whitfield T, Tang JW, Underhill G, Bergstrom T, Norberg P, et al. High Viral Diversity and Mixed Infections in Cerebral Spinal Fluid From Cases of Varicella Zoster Virus Encephalitis. The Journal of Infectious Diseases. PMID 29986093 DOI: 10.1093/Infdis/Jiy358 |
0.41 |
|
| 2018 |
Pimenoff VN, Houldcroft CJ, Rifkin RF, Underdown S. The Role of aDNA in Understanding the Coevolutionary Patterns of Human Sexually Transmitted Infections. Genes. 9. PMID 29941858 DOI: 10.3390/Genes9070317 |
0.446 |
|
| 2018 |
Houldcroft CJ, Roy S, Morfopoulou S, Margetts BK, Depledge DP, Cudini J, Shah D, Brown JR, Yara Romero E, Williams R, Cloutman-Green E, Rao K, Standing JF, Hartley J, Breuer J. Use of Whole-genome Sequencing of Adenovirus in Immunocompromised Paediatric Patients to Identify Nosocomial Transmission and Mixed-genotype Infection. The Journal of Infectious Diseases. PMID 29917114 DOI: 10.1093/Infdis/Jiy323 |
0.437 |
|
| 2017 |
Underdown SJ, Kumar K, Houldcroft C. Network analysis of the hominin origin of Herpes Simplex virus 2 from fossil data. Virus Evolution. 3: vex026. PMID 28979799 DOI: 10.1093/Ve/Vex026 |
0.412 |
|
| 2017 |
Houldcroft CJ, Ramond JB, Rifkin RF, Underdown SJ. Migrating microbes: what pathogens can tell us about population movements and human evolution. Annals of Human Biology. 1-11. PMID 28511559 DOI: 10.1080/03014460.2017.1325515 |
0.377 |
|
| 2017 |
Houldcroft CJ. Clinical and biological insights from viral genome sequencing Nature Reviews Microbiology. PMID 28090077 DOI: 10.1038/Nrmicro.2016.182 |
0.422 |
|
| 2016 |
Worth AJ, Houldcroft CJ, Booth C. Severe Epstein-Barr virus infection in primary immunodeficiency and the normal host. British Journal of Haematology. 175: 559-576. PMID 27748521 DOI: 10.1111/Bjh.14339 |
0.45 |
|
| 2016 |
Houldcroft CJ, Underdown SJ. Neanderthal genomics suggests a pleistocene time frame for the first epidemiologic transition. American Journal of Physical Anthropology. 160: 379-88. PMID 27063929 DOI: 10.1002/Ajpa.22985 |
0.46 |
|
| 2016 |
Munro AC, Houldcroft C. Human cancers and mammalian retroviruses: should we worry about bovine leukemia virus? Future Virology. 11: 163-166. DOI: 10.2217/Fvl.16.5 |
0.302 |
|
| 2016 |
Houldcroft C, Depledge D, Williams R, Cloutman-Green E, Standing J, Breuer J. Whole-genome sequencing of adenovirus in immunocompromised paediatric patients directly from clinical samples elucidates molecular epidemiology of suspected outbreaks Journal of Clinical Virology. 82: S14. DOI: 10.1016/J.Jcv.2016.08.026 |
0.385 |
|
| 2015 |
Houldcroft CJ, Breuer J. Tales from the crypt and coral reef: the successes and challenges of identifying new herpesviruses using metagenomics. Frontiers in Microbiology. 6: 188. PMID 25821447 DOI: 10.3389/Fmicb.2015.00188 |
0.454 |
|
| 2015 |
Houldcroft CJ, Kellam P. Host genetics of Epstein-Barr virus infection, latency and disease. Reviews in Medical Virology. 25: 71-84. PMID 25430668 DOI: 10.1002/Rmv.1816 |
0.603 |
|
| 2015 |
Houldcroft C. Sequencing drug-resistant cytomegalovirus in pediatric patients: toward personalized medicine Future Virology. 10: 813-816. DOI: 10.2217/Fvl.15.58 |
0.344 |
|
| 2014 |
Houldcroft CJ, Petrova V, Liu JZ, Frampton D, Anderson CA, Gall A, Kellam P. Host genetic variants and gene expression patterns associated with Epstein-Barr virus copy number in lymphoblastoid cell lines. Plos One. 9: e108384. PMID 25290448 DOI: 10.1371/Journal.Pone.0108384 |
0.557 |
|
| 2014 |
Archer E, Houldcroft CJ. Genome watch: rabid about whole lyssa genomes. Nature Reviews. Microbiology. 12: 316. PMID 24847553 DOI: 10.1038/Nrmicro3263 |
0.456 |
|
| 2010 |
Hué S, Gray ER, Gall A, Katzourakis A, Tan CP, Houldcroft CJ, McLaren S, Pillay D, Futreal A, Garson JA, Pybus OG, Kellam P, Towers GJ. Disease-associated XMRV sequences are consistent with laboratory contamination. Retrovirology. 7: 111. PMID 21171979 DOI: 10.1186/1742-4690-7-111 |
0.546 |
|
| Show low-probability matches. |