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Hanna Johannesson - Publications

Affiliations: 
Plant and Microbial Biology University of California, Berkeley, Berkeley, CA, United States 
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43 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Westerberg I, Ament-Velásquez SL, Vogan AA, Johannesson H. Evolutionary dynamics of the LTR-retrotransposon crapaud in the Podospora anserina species complex and the interaction with repeat-induced point mutations. Mobile Dna. 15: 1. PMID 38218923 DOI: 10.1186/s13100-023-00311-8  0.348
2023 Hensen N, Bonometti L, Westerberg I, Brännström IO, Guillou S, Cros-Aarteil S, Calhoun S, Haridas S, Kuo A, Mondo S, Pangilinan J, Riley R, LaButti K, Andreopoulos B, Lipzen A, ... ... Johannesson H, et al. Genome-scale phylogeny and comparative genomics of the fungal order Sordariales. Molecular Phylogenetics and Evolution. 189: 107938. PMID 37820761 DOI: 10.1016/j.ympev.2023.107938  0.729
2022 Hiltunen M, Ament-Velásquez SL, Ryberg M, Johannesson H. Stage-specific transposon activity in the life cycle of the fairy-ring mushroom Marasmius oreades. Proceedings of the National Academy of Sciences of the United States of America. 119: e2208575119. PMID 36343254 DOI: 10.1073/pnas.2208575119  0.34
2022 Vogan A, Svedberg J, Grudzinska-Sterno M, Johannesson H. Meiotic drive is associated with sexual incompatibility in Neurospora. Evolution; International Journal of Organic Evolution. PMID 36148939 DOI: 10.1111/evo.14630  0.32
2022 Vogan AA, Martinossi-Allibert I, Ament-Velásquez SL, Svedberg J, Johannesson H. The spore killers, fungal meiotic driver elements. Mycologia. 114: 1-23. PMID 35138994 DOI: 10.1080/00275514.2021.1994815  0.351
2021 Montoliu-Nerin M, Sánchez-García M, Bergin C, Kutschera VE, Johannesson H, Bever JD, Rosling A. In-depth Phylogenomic Analysis of Arbuscular Mycorrhizal Fungi Based on a Comprehensive Set of Genome Assemblies. Frontiers in Fungal Biology. 2: 716385. PMID 37744125 DOI: 10.3389/ffunb.2021.716385  0.38
2021 Zanders S, Johannesson H. Molecular Mechanisms and Evolutionary Consequences of Spore Killers in Ascomycetes. Microbiology and Molecular Biology Reviews : Mmbr. 85: e0001621. PMID 34756084 DOI: 10.1128/MMBR.00016-21  0.322
2021 Svedberg J, Vogan AA, Rhoades NA, Sarmarajeewa D, Jacobson DJ, Lascoux M, Hammond TM, Johannesson H. An introgressed gene causes meiotic drive in . Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33875604 DOI: 10.1073/pnas.2026605118  0.412
2021 Vogan AA, Ament-Velásquez SL, Bastiaans E, Wallerman O, Saupe SJ, Suh A, Johannesson H. The , a massive transposon carrying meiotic drive genes. Genome Research. PMID 33875482 DOI: 10.1101/gr.267609.120  0.376
2021 Hartmann FE, Ament-Velásquez SL, Vogan AA, Gautier V, Le Prieur S, Berramdane M, Snirc A, Johannesson H, Grognet P, Malagnac F, Silar P, Giraud T. Size variation of the non-recombining region on the mating-type chromosomes in the fungal Podospora anserina species complex. Molecular Biology and Evolution. PMID 33555341 DOI: 10.1093/molbev/msab040  0.323
2020 Ament-Velásquez SL, Johannesson H, Giraud T, Debuchy R, Saupe SJ, Debets AJM, Bastiaans E, Malagnac F, Grognet P, Peraza-Reyes L, Gladieux P, Kruys Å, Silar P, Huhndorf SM, Miller AN, et al. The taxonomy of the model filamentous fungus . Mycokeys. 75: 51-69. PMID 33281477 DOI: 10.3897/mycokeys.75.55968  0.62
2020 Montoliu-Nerin M, Sánchez-García M, Bergin C, Grabherr M, Ellis B, Kutschera VE, Kierczak M, Johannesson H, Rosling A. Building de novo reference genome assemblies of complex eukaryotic microorganisms from single nuclei. Scientific Reports. 10: 1303. PMID 31992756 DOI: 10.1038/S41598-020-58025-3  0.328
2020 Gladieux P, De Bellis F, Hann-Soden C, Svedberg J, Johannesson H, Taylor JW. Neurospora from Natural Populations: Population Genomics Insights into the Life History of a Model Microbial Eukaryote. Methods in Molecular Biology (Clifton, N.J.). 2090: 313-336. PMID 31975173 DOI: 10.1007/978-1-0716-0199-0_13  0.637
2019 Vogan AA, Ament-Velásquez SL, Granger-Farbos A, Svedberg J, Bastiaans E, Debets AJ, Coustou V, Yvanne H, Clavé C, Saupe SJ, Johannesson H. Combinations of genes create multiple meiotic drivers in . Elife. 8. PMID 31347500 DOI: 10.7554/eLife.46454  0.367
2018 Svedberg J, Hosseini S, Chen J, Vogan AA, Mozgova I, Hennig L, Manitchotpisit P, Abusharekh A, Hammond TM, Lascoux M, Johannesson H. Convergent evolution of complex genomic rearrangements in two fungal meiotic drive elements. Nature Communications. 9: 4242. PMID 30315196 DOI: 10.1038/s41467-018-06562-x  0.318
2016 Lindholm AK, Dyer KA, Firman RC, Fishman L, Forstmeier W, Holman L, Johannesson H, Knief U, Kokko H, Larracuente AM, Manser A, Montchamp-Moreau C, Petrosyan VG, Pomiankowski A, Presgraves DC, et al. The Ecology and Evolutionary Dynamics of Meiotic Drive. Trends in Ecology & Evolution. PMID 26920473 DOI: 10.1016/J.Tree.2016.02.001  0.344
2016 Corcoran P, Anderson JL, Jacobson DJ, Sun Y, Ni P, Lascoux M, Johannesson H. Introgression maintains the genetic integrity of the sex-determining chromosome of the fungus Neurospora tetrasperma. Genome Research. PMID 26893460 DOI: 10.1101/Gr.197244.115  0.428
2015 Idnurm A, Hood ME, Johannesson H, Giraud T. Contrasted patterns in mating-type chromosomes in fungi: hotspots versus coldspots of recombination. Fungal Biology Reviews. 29: 220-229. PMID 26688691 DOI: 10.1016/j.fbr.2015.06.001  0.372
2015 Sun Y, Whittle CA, Corcoran P, Johannesson H. Intron evolution in Neurospora: the role of mutational bias and selection. Genome Research. 25: 100-10. PMID 25342722 DOI: 10.1101/gr.175653.114  0.361
2014 Whittle CA, Sun Y, Johannesson H. Dynamics of transcriptome evolution in the model eukaryote Neurospora Journal of Evolutionary Biology. 27: 1125-1135. PMID 24848562 DOI: 10.1111/jeb.12386  0.369
2014 Corcoran P, Dettman JR, Sun Y, Luque EM, Corrochano LM, Taylor JW, Lascoux M, Johannesson H. A global multilocus analysis of the model fungus Neurospora reveals a single recent origin of a novel genetic system. Molecular Phylogenetics and Evolution. 78: 136-47. PMID 24845789 DOI: 10.1016/J.Ympev.2014.05.007  0.694
2013 Gioti A, Stajich JE, Johannesson H. Neurospora and the dead-end hypothesis: genomic consequences of selfing in the model genus. Evolution; International Journal of Organic Evolution. 67: 3600-16. PMID 24299411 DOI: 10.1111/Evo.12206  0.591
2013 Samils N, Gioti A, Karlsson M, Sun Y, Kasuga T, Bastiaans E, Wang Z, Li N, Townsend JP, Johannesson H. Sex-linked transcriptional divergence in the hermaphrodite fungus Neurospora tetrasperma. Proceedings. Biological Sciences / the Royal Society. 280: 20130862. PMID 23782882 DOI: 10.1098/Rspb.2013.0862  0.702
2012 Nygren K, Wallberg A, Samils N, Stajich JE, Townsend JP, Karlsson M, Johannesson H. Analyses of expressed sequence tags in Neurospora reveal rapid evolution of genes associated with the early stages of sexual reproduction in fungi. Bmc Evolutionary Biology. 12: 229. PMID 23186325 DOI: 10.1186/1471-2148-12-229  0.702
2012 Whittle CA, Johannesson H. Neurospora as a model to empirically test central hypotheses in eukaryotic genome evolution: why this fungal genus offers promising opportunities. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 34: 934-7. PMID 22968834 DOI: 10.1002/bies.201200110  0.358
2012 Corcoran P, Jacobson DJ, Bidartondo MI, Hickey PC, Kerekes JF, Taylor JW, Johannesson H. Quantifying functional heterothallism in the pseudohomothallic ascomycete Neurospora tetrasperma. Fungal Biology. 116: 962-75. PMID 22954339 DOI: 10.1016/J.Funbio.2012.06.006  0.457
2012 Nygren K, Strandberg R, Gioti A, Karlsson M, Johannesson H. Deciphering the relationship between mating system and the molecular evolution of the pheromone and receptor genes in Neurospora. Molecular Biology and Evolution. 29: 3827-42. PMID 22848070 DOI: 10.1093/molbev/mss193  0.3
2012 Sun Y, Corcoran P, Menkis A, Whittle CA, Andersson SG, Johannesson H. Large-scale introgression shapes the evolution of the mating-type chromosomes of the filamentous ascomycete Neurospora tetrasperma. Plos Genetics. 8: e1002820. PMID 22844246 DOI: 10.1371/journal.pgen.1002820  0.348
2012 Wang Z, Kin K, López-Giráldez F, Johannesson H, Townsend JP. Sex-specific gene expression during asexual development of Neurospora crassa. Fungal Genetics and Biology : Fg & B. 49: 533-43. PMID 22626843 DOI: 10.1016/J.Fgb.2012.05.004  0.527
2012 Gioti A, Mushegian AA, Strandberg R, Stajich JE, Johannesson H. Unidirectional evolutionary transitions in fungal mating systems and the role of transposable elements. Molecular Biology and Evolution. 29: 3215-26. PMID 22593224 DOI: 10.1093/Molbev/Mss132  0.603
2011 Whittle CA, Sun Y, Johannesson H. Evolution of synonymous codon usage in Neurospora tetrasperma and Neurospora discreta Genome Biology and Evolution. 3: 332-343. PMID 21402862 DOI: 10.1093/gbe/evr018  0.321
2011 Whittle CA, Nygren K, Johannesson H. Consequences of reproductive mode on genome evolution in fungi Fungal Genetics and Biology. 48: 661-667. PMID 21362492 DOI: 10.1016/j.fgb.2011.02.005  0.332
2010 Menkis A, Whittle CA, Johannesson H. Gene genealogies indicates abundant gene conversions and independent evolutionary histories of the mating-type chromosomes in the evolutionary history of Neurospora tetrasperma. Bmc Evolutionary Biology. 10: 234. PMID 20673371 DOI: 10.1186/1471-2148-10-234  0.358
2010 Strandberg R, Nygren K, Menkis A, James TY, Wik L, Stajich JE, Johannesson H. Conflict between reproductive gene trees and species phylogeny among heterothallic and pseudohomothallic members of the filamentous ascomycete genus Neurospora. Fungal Genetics and Biology : Fg & B. 47: 869-78. PMID 20601044 DOI: 10.1016/J.Fgb.2010.06.008  0.703
2009 Menkis A, Bastiaans E, Jacobson DJ, Johannesson H. Phylogenetic and biological species diversity within the Neurospora tetrasperma complex. Journal of Evolutionary Biology. 22: 1923-36. PMID 19682307 DOI: 10.1111/j.1420-9101.2009.01801.x  0.37
2009 James TY, Johansson SB, Johannesson H. Trikaryon formation and nuclear selection in pairings between heterokaryons and homokaryons of the root rot pathogen Heterobasidion parviporum. Mycological Research. 113: 583-90. PMID 19640398 DOI: 10.1016/J.Mycres.2009.01.006  0.522
2008 James TY, Stenlid J, Olson A, Johannesson H. Evolutionary significance of imbalanced nuclear ratios within heterokaryons of the basidiomycete fungus Heterobasidion parviporum. Evolution; International Journal of Organic Evolution. 62: 2279-96. PMID 18637961 DOI: 10.1111/J.1558-5646.2008.00462.X  0.569
2008 Wik L, Karlsson M, Johannesson H. The evolutionary trajectory of the mating-type (mat) genes in Neurospora relates to reproductive behavior of taxa. Bmc Evolutionary Biology. 8: 109. PMID 18405383 DOI: 10.1186/1471-2148-8-109  0.323
2008 Karlsson M, Nygren K, Johannesson H. The evolution of the pheromonal signal system and its potential role for reproductive isolation in heterothallic neurospora. Molecular Biology and Evolution. 25: 168-78. PMID 18024989 DOI: 10.1093/molbev/msm253  0.352
2007 Taylor JW, Turner E, Pringle A, Dettman J, Johannesson H. Fungal species: Thoughts on their recognition, maintenance and selection Fungi in the Environment. 313-339. DOI: 10.1017/CBO9780511541797.016  0.708
2006 Johannesson H, Kasuga T, Schaller RA, Good B, Gardner MJ, Townsend JP, Cole GT, Taylor JW. Phase-specific gene expression underlying morphological adaptations of the dimorphic human pathogenic fungus, Coccidioides posadasii. Fungal Genetics and Biology : Fg & B. 43: 545-59. PMID 16697669 DOI: 10.1016/J.Fgb.2006.02.003  0.708
2005 Johannesson H, Townsend JP, Hung CY, Cole GT, Taylor JW. Concerted evolution in the repeats of an immunomodulating cell surface protein, SOWgp, of the human pathogenic fungi Coccidioides immitis and C. posadasii. Genetics. 171: 109-17. PMID 15965255 DOI: 10.1534/Genetics.105.040923  0.634
2004 Johannesson H, Vidal P, Guarro J, Herr RA, Cole GT, Taylor JW. Positive directional selection in the proline-rich antigen (PRA) gene among the human pathogenic fungi Coccidioides immitis, C. posadasii and their closest relatives. Molecular Biology and Evolution. 21: 1134-45. PMID 15034131 DOI: 10.1093/Molbev/Msh124  0.527
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