Sandeep Venkataram - Publications

University of California, San Diego, La Jolla, CA 
evolution, yeast

12 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Venkataram S, Kryazhimskiy S. Evolutionary repeatability of emergent properties of ecological communities. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 378: 20220047. PMID 37004728 DOI: 10.1098/rstb.2022.0047  0.626
2023 Johnson MS, Venkataram S, Kryazhimskiy S. Best Practices in Designing, Sequencing, and Identifying Random DNA Barcodes. Journal of Molecular Evolution. PMID 36651964 DOI: 10.1007/s00239-022-10083-z  0.611
2023 Venkataram S, Kuo HY, Hom EFY, Kryazhimskiy S. Mutualism-enhancing mutations dominate early adaptation in a two-species microbial community. Nature Ecology & Evolution. 7: 143-154. PMID 36593292 DOI: 10.1038/s41559-022-01923-8  0.712
2020 Venkataram S, Monasky R, Sikaroodi SH, Kryazhimskiy S, Kacar B. Evolutionary stalling and a limit on the power of natural selection to improve a cellular module. Proceedings of the National Academy of Sciences of the United States of America. PMID 32680961 DOI: 10.1073/Pnas.1921881117  0.7
2019 Rech GE, Bogaerts-Márquez M, Barrón MG, Merenciano M, Villanueva-Cañas JL, Horváth V, Fiston-Lavier AS, Luyten I, Venkataram S, Quesneville H, Petrov DA, González J. Stress response, behavior, and development are shaped by transposable element-induced mutations in Drosophila. Plos Genetics. 15: e1007900. PMID 30753202 DOI: 10.1371/Journal.Pgen.1007900  0.693
2018 Li Y, Venkataram S, Agarwala A, Dunn B, Petrov DA, Sherlock G, Fisher DS. Hidden Complexity of Yeast Adaptation under Simple Evolutionary Conditions. Current Biology : Cb. PMID 29429618 DOI: 10.1016/J.Cub.2018.01.009  0.56
2017 Kita R, Venkataram S, Zhou Y, Fraser HB. High-resolution mapping of cis-regulatory variation in budding yeast. Proceedings of the National Academy of Sciences of the United States of America. 114: E10736-E10744. PMID 29183975 DOI: 10.1073/Pnas.1717421114  0.403
2017 Ebel ER, Telis N, Venkataram S, Petrov DA, Enard D. High rate of adaptation of mammalian proteins that interact with Plasmodium and related parasites. Plos Genetics. 13: e1007023. PMID 28957326 DOI: 10.1371/Journal.Pgen.1007023  0.519
2016 Venkataram S, Dunn B, Li Y, Agarwala A, Chang J, Ebel ER, Geiler-Samerotte K, Hérissant L, Blundell JR, Levy SF, Fisher DS, Sherlock G, Petrov DA. Development of a Comprehensive Genotype-to-Fitness Map of Adaptation-Driving Mutations in Yeast. Cell. PMID 27594428 DOI: 10.1016/J.Cell.2016.08.002  0.692
2015 Leung W, Shaffer CD, Reed LK, Smith ST, Barshop W, Dirkes W, Dothager M, Lee P, Wong J, Xiong D, Yuan H, Bedard JE, Machone JF, Patterson SD, Price AL, ... ... Venkataram S, et al. Drosophila muller f elements maintain a distinct set of genomic properties over 40 million years of evolution. G3 (Bethesda, Md.). 5: 719-40. PMID 25740935 DOI: 10.1534/G3.114.015966  0.304
2015 Levy SF, Blundell JR, Venkataram S, Petrov DA, Fisher DS, Sherlock G. Quantitative evolutionary dynamics using high-resolution lineage tracking. Nature. 519: 181-6. PMID 25731169 DOI: 10.1038/Nature14279  0.62
2010 Venkataram S, Fay JC. Is transcription factor binding site turnover a sufficient explanation for cis-regulatory sequence divergence? Genome Biology and Evolution. 2: 851-8. PMID 21068212 DOI: 10.1093/Gbe/Evq066  0.527
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