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Daniel L. Ayres - Publications

Affiliations: 
2017 University of Maryland, College Park, College Park, MD 
Area:
Computational Biology
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7 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Smith K, Ayres D, Neumaier R, Worheide G, Hohna S. Bayesian Phylogenetic Analysis on multi-core Compute Architectures: Implementation and evaluation of BEAGLE in RevBayes with MPI. Systematic Biology. PMID 38284268 DOI: 10.1093/sysbio/syae005  0.491
2019 Baele G, Ayres DL, Rambaut A, Suchard MA, Lemey P. High-Performance Computing in Bayesian Phylogenetics and Phylodynamics Using BEAGLE. Methods in Molecular Biology (Clifton, N.J.). 1910: 691-722. PMID 31278682 DOI: 10.1007/978-1-4939-9074-0_23  0.565
2019 Ayres DL, Cummings MP, Baele G, Darling AE, Lewis PO, Swofford DL, Huelsenbeck JP, Lemey P, Rambaut A, Suchard MA. BEAGLE 3: Improved Performance, Scaling, and Usability for a High-Performance Computing Library for Statistical Phylogenetics. Systematic Biology. PMID 31034053 DOI: 10.1093/Sysbio/Syz020  0.532
2018 Goodheart JA, Bleidißel S, Schillo D, Strong EE, Ayres DL, Preisfeld A, Collins AG, Cummings MP, Wägele H. Comparative morphology and evolution of the cnidosac in Cladobranchia (Gastropoda: Heterobranchia: Nudibranchia). Frontiers in Zoology. 15: 43. PMID 30473719 DOI: 10.1186/S12983-018-0289-2  0.385
2018 Suchard MA, Lemey P, Baele G, Ayres DL, Drummond AJ, Rambaut A. Bayesian phylogenetic and phylodynamic data integration using BEAST 1.10. Virus Evolution. 4: vey016. PMID 29942656 DOI: 10.1093/Ve/Vey016  0.446
2012 Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A, Höhna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology. 61: 539-42. PMID 22357727 DOI: 10.1093/Sysbio/Sys029  0.437
2012 Ayres DL, Darling A, Zwickl DJ, Beerli P, Holder MT, Lewis PO, Huelsenbeck JP, Ronquist F, Swofford DL, Cummings MP, Rambaut A, Suchard MA. BEAGLE: an application programming interface and high-performance computing library for statistical phylogenetics. Systematic Biology. 61: 170-3. PMID 21963610 DOI: 10.1093/Sysbio/Syr100  0.529
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