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Daniel A. Dalquen, PhD - Publications

Affiliations: 
University College London, London, United Kingdom 
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9 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Altenhoff AM, Levy J, Zarowiecki M, Tomiczek B, Vesztrocy AW, Dalquen DA, Müller S, Telford MJ, Glover NM, Dylus D, Dessimoz C. Corrigendum: OMA standalone: orthology inference among public and custom genomes and transcriptomes Genome Research. 30. DOI: 10.1101/Gr.266809.120  0.71
2019 Altenhoff AM, Levy J, Zarowiecki M, Tomiczek B, Warwick Vesztrocy A, Dalquen DA, Müller S, Telford MJ, Glover NM, Dylus D, Dessimoz C. OMA standalone: orthology inference among public and custom genomes and transcriptomes. Genome Research. PMID 31235654 DOI: 10.1101/Gr.243212.118  0.752
2018 Thawornwattana Y, Dalquen D, Yang Z. Coalescent analysis of phylogenomic data confidently resolves the species relationships in the Anopheles gambiae species complex. Molecular Biology and Evolution. PMID 30102363 DOI: 10.1093/Molbev/Msy158  0.446
2016 Dalquen D, Zhu T, Yang Z. Maximum Likelihood Implementation of an Isolation-with-Migration Model for Three Species. Systematic Biology. PMID 27486180 DOI: 10.1093/Sysbio/Syw063  0.488
2016 Altenhoff AM, Boeckmann B, Capella-Gutierrez S, Dalquen DA, DeLuca T, Forslund K, Huerta-Cepas J, Linard B, Pereira C, Pryszcz LP, Schreiber F, da Silva AS, Szklarczyk D, Train CM, Bork P, et al. Standardized benchmarking in the quest for orthologs. Nature Methods. PMID 27043882 DOI: 10.1038/Nmeth.3830  0.701
2013 Dalquen DA, Dessimoz C. Bidirectional best hits miss many orthologs in duplication-rich clades such as plants and animals Genome Biology and Evolution. 5: 1800-1806. PMID 24013106 DOI: 10.1093/Gbe/Evt132  0.748
2013 Dalquen DA, Altenhoff AM, Gonnet GH, Dessimoz C. The Impact of Gene Duplication, Insertion, Deletion, Lateral Gene Transfer and Sequencing Error on Orthology Inference: A Simulation Study Plos One. 8. PMID 23451112 DOI: 10.1371/Journal.Pone.0056925  0.678
2012 Schirrmeister BE, Dalquen DA, Anisimova M, Bagheri HC. Gene copy number variation and its significance in cyanobacterial phylogeny Bmc Microbiology. 12. PMID 22894826 DOI: 10.1186/1471-2180-12-177  0.549
2012 Dalquen DA, Anisimova M, Gonnet GH, Dessimoz C. ALF-A simulation framework for genome evolution Molecular Biology and Evolution. 29: 1115-1123. PMID 22160766 DOI: 10.1093/Molbev/Msr268  0.69
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