Yu Fan, Ph.D - Publications

Affiliations: 
EEB University of Connecticut, Storrs, CT, United States 
Area:
phylogenetics

10 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Ji Y, Xie W, Fan Y, Shi Y, Kong D, Lu J. Degradation of trimethoprim by thermo-activated persulfate oxidation: Reaction kinetics and transformation mechanisms Chemical Engineering Journal. 286: 16-24. DOI: 10.1016/j.cej.2015.10.050  0.32
2015 Fang LT, Afshar PT, Chhibber A, Mohiyuddin M, Fan Y, Mu JC, Gibeling G, Barr S, Asadi NB, Gerstein MB, Koboldt DC, Wang W, Wong WH, Lam HY. An ensemble approach to accurately detect somatic mutations using SomaticSeq. Genome Biology. 16: 197. PMID 26381235 DOI: 10.1186/s13059-015-0758-2  0.36
2014 Peng G, Fan Y, Wang W. FamSeq: a variant calling program for family-based sequencing data using graphics processing units. Plos Computational Biology. 10: e1003880. PMID 25357123 DOI: 10.1371/journal.pcbi.1003880  0.36
2014 Lewis PO, Xie W, Chen MH, Fan Y, Kuo L. Posterior predictive Bayesian phylogenetic model selection. Systematic Biology. 63: 309-21. PMID 24193892 DOI: 10.1093/sysbio/syt068  0.36
2013 Shen P, Wang W, Chi AK, Fan Y, Davis RW, Scharfe C. Multiplex target capture with double-stranded DNA probes. Genome Medicine. 5: 50. PMID 23718862 DOI: 10.1186/gm454  0.36
2013 Peng G, Fan Y, Palculict TB, Shen P, Ruteshouser EC, Chi AK, Davis RW, Huff V, Scharfe C, Wang W. Rare variant detection using family-based sequencing analysis. Proceedings of the National Academy of Sciences of the United States of America. 110: 3985-90. PMID 23426633 DOI: 10.1073/pnas.1222158110  0.36
2013 Fan Y, Wu R, Chen MH, Kuo L, Lewis PO. A Conditional Autoregressive Model for Detecting Natural Selection in Protein-Coding DNA Sequences Springer Proceedings in Mathematics and Statistics. 55: 203-212. DOI: 10.1007/978-1-4614-7846-1_17  0.36
2011 Xie W, Lewis PO, Fan Y, Kuo L, Chen MH. Improving marginal likelihood estimation for Bayesian phylogenetic model selection. Systematic Biology. 60: 150-60. PMID 21187451 DOI: 10.1093/sysbio/syq085  0.36
2011 Fan Y, Wu R, Chen MH, Kuo L, Lewis PO. Choosing among partition models in Bayesian phylogenetics. Molecular Biology and Evolution. 28: 523-32. PMID 20801907 DOI: 10.1093/molbev/msq224  0.36
2008 Wickett NJ, Fan Y, Lewis PO, Goffinet B. Distribution and evolution of pseudogenes, gene losses, and a gene rearrangement in the plastid genome of the nonphotosynthetic liverwort, Aneura mirabilis (Metzgeriales, Jungermanniopsida). Journal of Molecular Evolution. 67: 111-22. PMID 18594897 DOI: 10.1007/s00239-008-9133-1  0.36
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