| Year |
Citation |
Score |
| 2024 |
Kulkarni S, Morrissey A, Sebastian A, Keller CA, Giardine B, Smith C, Akinniyi OT, Arnaoutov A, Albert I, Mahony S, Reese JC. Human CCR4-NOT is a global regulator of gene expression and is a novel silencer of retrotransposon activation. Biorxiv : the Preprint Server For Biology. PMID 39314347 DOI: 10.1101/2024.09.10.612038 |
0.443 |
|
| 2024 |
Aboreden NG, Lam JC, Goel VY, Wang S, Wang X, Midla SC, Quijano A, Keller CA, Giardine BM, Hardison RC, Zhang H, Hansen AS, Blobel GA. LDB1 establishes multi-enhancer networks to regulate gene expression. Biorxiv : the Preprint Server For Biology. PMID 39229045 DOI: 10.1101/2024.08.23.609430 |
0.584 |
|
| 2024 |
Lam JC, Aboreden NG, Midla SC, Wang S, Huang A, Keller CA, Giardine B, Henderson KA, Hardison RC, Zhang H, Blobel GA. YY1-controlled regulatory connectivity and transcription are influenced by the cell cycle. Nature Genetics. PMID 39210046 DOI: 10.1038/s41588-024-01871-y |
0.608 |
|
| 2024 |
Xiang G, He X, Giardine BM, Isaac KJ, Taylor DJ, McCoy RC, Jansen C, Keller CA, Wixom AQ, Cockburn A, Miller A, Qi Q, He Y, Li Y, Lichtenberg J, et al. Interspecies regulatory landscapes and elements revealed by novel joint systematic integration of human and mouse blood cell epigenomes. Genome Research. PMID 38951027 DOI: 10.1101/gr.277950.123 |
0.7 |
|
| 2024 |
Zhao H, Lin Y, Lin E, Liu F, Shu L, Jing D, Wang B, Wang M, Shan F, Zhang L, Lam JC, Midla SC, Giardine BM, Keller CA, Hardison RC, et al. Genome folding principles uncovered in condensin-depleted mitotic chromosomes. Nature Genetics. PMID 38802567 DOI: 10.1038/s41588-024-01759-x |
0.541 |
|
| 2024 |
Huang P, Peslak SA, Shehu V, Keller CA, Giardine BM, Shi J, Hardison RC, Blobel GA, Khandros E. Let-7 miRNAs repress HIC2 to regulate BCL11A transcription and hemoglobin switching. Blood. PMID 38364109 DOI: 10.1182/blood.2023023399 |
0.541 |
|
| 2023 |
Zhao H, Lin Y, Lin E, Liu F, Shu L, Jing D, Wang B, Wang M, Shan F, Zhang L, Lam JC, Midla SC, Giardine BM, Keller CA, Hardison RC, et al. Genome folding principles revealed in condensin-depleted mitotic chromosomes. Biorxiv : the Preprint Server For Biology. PMID 38014261 DOI: 10.1101/2023.11.09.566494 |
0.53 |
|
| 2023 |
Huang P, Peslak SA, Ren R, Khandros E, Qin K, Keller CA, Giardine B, Bell HW, Lan X, Sharma M, Horton JR, Abdulmalik O, Chou ST, Shi J, Crossley M, et al. Author Correction: HIC2 controls developmental hemoglobin switching by repressing BCL11A transcription. Nature Genetics. PMID 37524792 DOI: 10.1038/s41588-023-01488-7 |
0.529 |
|
| 2023 |
Xiang G, He X, Giardine BM, Weaver KJ, Taylor DJ, McCoy RC, Jansen C, Keller CA, Wixom AQ, Cockburn A, Miller A, Qi Q, He Y, Li Y, Lichtenberg J, et al. Cross-species regulatory landscapes and elements revealed by novel joint systematic integration of human and mouse blood cell epigenomes. Biorxiv : the Preprint Server For Biology. PMID 37066352 DOI: 10.1101/2023.04.02.535219 |
0.679 |
|
| 2023 |
Xiang G, Giardine B, An L, Sun C, Keller CA, Heuston EF, Anderson SM, Kirby M, Bodine D, Zhang Y, Hardison RC. Snapshot: a package for clustering and visualizing epigenetic history during cell differentiation. Bmc Bioinformatics. 24: 102. PMID 36941541 DOI: 10.1186/s12859-023-05223-1 |
0.596 |
|
| 2023 |
Qin K, Lan X, Huang P, Saari MS, Khandros E, Keller CA, Giardine BM, Abdulmalik O, Shi J, Hardison RC, Blobel GA. Molecular basis of polycomb group protein-mediated fetal hemoglobin repression. Blood. PMID 36893455 DOI: 10.1182/blood.2022019578 |
0.559 |
|
| 2023 |
Vermunt MW, Luan J, Zhang Z, Thrasher AJ, Huang A, Saari MS, Khandros E, Beagrie RA, Zhang S, Vemulamada P, Brilleman M, Lee K, Yano JA, Giardine BM, Keller CA, et al. Gene silencing dynamics are modulated by transiently active regulatory elements. Molecular Cell. 83: 715-730.e6. PMID 36868189 DOI: 10.1016/j.molcel.2023.02.006 |
0.656 |
|
| 2022 |
Koch H, Keller CA, Xiang G, Giardine B, Zhang F, Wang Y, Hardison RC, Li Q. CLIMB: High-dimensional association detection in large scale genomic data. Nature Communications. 13: 6874. PMID 36371401 DOI: 10.1038/s41467-022-34360-z |
0.543 |
|
| 2022 |
Luan J, Vermunt MW, Syrett CM, Coté A, Tome JM, Zhang H, Huang A, Luppino JM, Keller CA, Giardine BM, Zhang S, Dunagin MC, Zhang Z, Joyce EF, Lis JT, et al. CTCF blocks antisense transcription initiation at divergent promoters. Nature Structural & Molecular Biology. 29: 1136-1144. PMID 36369346 DOI: 10.1038/s41594-022-00855-y |
0.625 |
|
| 2022 |
Huang P, Peslak SA, Ren R, Khandros E, Qin K, Keller CA, Giardine B, Bell HW, Lan X, Sharma M, Horton JR, Abdulmalik O, Chou ST, Shi J, Crossley M, et al. HIC2 controls developmental hemoglobin switching by repressing BCL11A transcription. Nature Genetics. PMID 35941187 DOI: 10.1038/s41588-022-01152-6 |
0.642 |
|
| 2022 |
Qin K, Huang P, Feng R, Keller CA, Peslak SA, Khandros E, Saari MS, Lan X, Mayuranathan T, Doerfler PA, Abdulmalik O, Giardine B, Chou ST, Shi J, Hardison RC, et al. Publisher Correction: Dual function NFI factors control fetal hemoglobin silencing in adult erythroid cells. Nature Genetics. PMID 35650318 DOI: 10.1038/s41588-022-01112-0 |
0.482 |
|
| 2022 |
Wakabayashi A, Kihiu M, Sharma M, Thrasher AJ, Saari MS, Quesnel-Vallieres M, Abdulmalik O, Peslak SA, Khandros E, Keller CA, Giardine BM, Barash Y, Hardison RC, Shi J, Blobel GA. Identification and characterization of RBM12 as a novel regulator of fetal hemoglobin expression. Blood Advances. PMID 35622975 DOI: 10.1182/bloodadvances.2022007904 |
0.625 |
|
| 2022 |
Qin K, Huang P, Feng R, Keller CA, Peslak SA, Khandros E, Saari MS, Lan X, Mayuranathan T, Doerfler PA, Abdulmalik O, Giardine B, Chou ST, Shi J, Hardison RC, et al. Dual function NFI factors control fetal hemoglobin silencing in adult erythroid cells. Nature Genetics. PMID 35618846 DOI: 10.1038/s41588-022-01076-1 |
0.625 |
|
| 2022 |
Moore JE, Purcaro MJ, Pratt HE, Epstein CB, Shoresh N, Adrian J, Kawli T, Davis CA, Dobin A, Kaul R, Halow J, Van Nostrand EL, Freese P, Gorkin DU, Shen Y, ... ... Keller CA, et al. Author Correction: Expanded encyclopaedias of DNA elements in the human and mouse genomes. Nature. PMID 35474001 DOI: 10.1038/s41586-021-04226-3 |
0.551 |
|
| 2021 |
Zhang H, Lam J, Zhang D, Lan Y, Vermunt MW, Keller CA, Giardine B, Hardison RC, Blobel GA. CTCF and transcription influence chromatin structure re-configuration after mitosis. Nature Communications. 12: 5157. PMID 34453048 DOI: 10.1038/s41467-021-25418-5 |
0.651 |
|
| 2021 |
Keller CA, Wixom AQ, Heuston EF, Giardine B, Hsiung CC, Long MR, Miller A, Anderson SM, Cockburn A, Blobel GA, Bodine DM, Hardison RC. Effects of sheared chromatin length on ChIP-seq quality and sensitivity. G3 (Bethesda, Md.). PMID 33788948 DOI: 10.1093/g3journal/jkab101 |
0.59 |
|
| 2021 |
Olson TL, Cheon H, Xing JC, Olson KC, Paila U, Hamele CE, Neelamraju Y, Shemo BC, Schmachtenberg MW, Sundararaman SK, Toro MF, Keller CA, Farber EA, Onengut-Gumuscu S, Garrett-Bakelman FE, et al. Frequent Somatic TET2 Mutations in Chronic NK-LGL Leukemia with Distinct Patterns of Cytopenias. Blood. PMID 33786584 DOI: 10.1182/blood.2020005831 |
0.423 |
|
| 2021 |
Luan J, Xiang G, Gómez-García PA, Tome JM, Zhang Z, Vermunt MW, Zhang H, Huang A, Keller CA, Giardine BM, Zhang Y, Lan Y, Lis JT, Lakadamyali M, Hardison RC, et al. Distinct properties and functions of CTCF revealed by a rapidly inducible degron system. Cell Reports. 34: 108783. PMID 33626344 DOI: 10.1016/j.celrep.2021.108783 |
0.651 |
|
| 2020 |
Lan X, Ren R, Feng R, Ly LC, Lan Y, Zhang Z, Aboreden N, Qin K, Horton JR, Grevet JD, Mayuranathan T, Abdulmalik O, Keller CA, Giardine B, Hardison RC, et al. ZNF410 Uniquely Activates the NuRD Component CHD4 to Silence Fetal Hemoglobin Expression. Molecular Cell. PMID 33301730 DOI: 10.1016/j.molcel.2020.11.006 |
0.641 |
|
| 2020 |
Peslak SA, Khandros E, Huang P, Lan X, Geronimo CL, Grevet JD, Abdulmalik O, Zhang Z, Giardine BM, Keller CA, Shi J, Hardison RC, Blobel GA. HRI depletion cooperates with pharmacologic inducers to elevate fetal hemoglobin and reduce sickle cell formation. Blood Advances. 4: 4560-4572. PMID 32956454 DOI: 10.1182/Bloodadvances.2020002475 |
0.561 |
|
| 2020 |
Zhang D, Huang P, Sharma M, Keller CA, Giardine B, Zhang H, Gilgenast TG, Phillips-Cremins JE, Hardison RC, Blobel GA. Alteration of genome folding via contact domain boundary insertion. Nature Genetics. PMID 32868908 DOI: 10.1038/S41588-020-0680-8 |
0.586 |
|
| 2020 |
Moore JE, Purcaro MJ, Pratt HE, Epstein CB, Shoresh N, Adrian J, Kawli T, Davis CA, Dobin A, Kaul R, Halow J, Van Nostrand EL, Freese P, Gorkin DU, ... ... Keller CA, et al. Expanded encyclopaedias of DNA elements in the human and mouse genomes. Nature. 583: 699-710. PMID 32728249 DOI: 10.1038/S41586-020-2493-4 |
0.686 |
|
| 2020 |
Huang P, Peslak SA, Lan X, Khandros E, Yano JA, Sharma M, Keller CA, Giardine BM, Qin K, Abdulmalik O, Hardison R, Shi J, Blobel GA. HRI-regulated transcription factor ATF4 activates BCL11A transcription to silence fetal hemoglobin expression. Blood. PMID 32299090 DOI: 10.1182/Blood.2020005301 |
0.689 |
|
| 2020 |
Khandros E, Huang P, Peslak SA, Sharma M, Abdulmalik O, Giardine BM, Zhang Z, Keller CA, Hardison R, Blobel GA. Understanding Heterogeneity of Fetal Hemoglobin Induction through Comparative Analysis of F- and A-erythroblasts. Blood. PMID 32268371 DOI: 10.1182/Blood.2020005058 |
0.605 |
|
| 2020 |
Xiang G, Keller CA, Heuston EF, Giardine BM, An L, Wixom AQ, Miller A, Cockburn A, Sauria MEG, Weaver K, Lichtenberg J, Göttgens B, Li Q, Bodine D, Mahony S, et al. An integrative view of the regulatory and transcriptional landscapes in mouse hematopoiesis. Genome Research. PMID 32132109 DOI: 10.1101/Gr.255760.119 |
0.717 |
|
| 2020 |
Xiang G, Keller CA, Giardine B, An L, Li Q, Zhang Y, Hardison RC. S3norm: simultaneous normalization of sequencing depth and signal-to-noise ratio in epigenomic data. Nucleic Acids Research. PMID 32086521 DOI: 10.1093/Nar/Gkaa105 |
0.526 |
|
| 2019 |
Zhang H, Emerson DJ, Gilgenast TG, Titus KR, Lan Y, Huang P, Zhang D, Wang H, Keller CA, Giardine B, Hardison RC, Phillips-Cremins JE, Blobel GA. Chromatin structure dynamics during the mitosis-to-G1 phase transition. Nature. PMID 31776509 DOI: 10.1038/S41586-019-1778-Y |
0.613 |
|
| 2019 |
Hardison RC, Zhang Y, Keller CA, Xiang G, Heuston EF, An L, Lichtenberg J, Giardine BM, Bodine D, Mahony S, Li Q, Yue F, Weiss MJ, Blobel GA, Taylor J, et al. Systematic integration of GATA transcription factors and epigenomes via IDEAS paints the regulatory landscape of hematopoietic cells. Iubmb Life. PMID 31769130 DOI: 10.1002/Iub.2195 |
0.726 |
|
| 2019 |
Lan X, Khandros E, Huang P, Peslak SA, Bhardwaj SK, Grevet JD, Abdulmalik O, Wang H, Keller CA, Giardine B, Baeza J, Duffner ER, El Demerdash O, Wu XS, Vakoc CR, et al. The E3 ligase adaptor molecule SPOP regulates fetal hemoglobin levels in adult erythroid cells. Blood Advances. 3: 1586-1597. PMID 31126914 DOI: 10.1182/Bloodadvances.2019032318 |
0.603 |
|
| 2019 |
Behera V, Stonestrom AJ, Hamagami N, Hsiung CC, Keller CA, Giardine B, Sidoli S, Yuan ZF, Bhanu NV, Werner MT, Wang H, Garcia BA, Hardison RC, Blobel GA. Interrogating Histone Acetylation and BRD4 as Mitotic Bookmarks of Transcription. Cell Reports. 27: 400-415.e5. PMID 30970245 DOI: 10.1016/J.Celrep.2019.03.057 |
0.695 |
|
| 2019 |
Peslak SA, Lan X, Khandros E, Huang P, Yano JA, Grevet JD, Abdulmalik O, Keller CA, Hardison RC, Shi J, Blobel GA. Heme-Regulated Inhibitor (HRI) Depletion Cooperates with Pharmacologic Inducers to Strongly Elevate Fetal Hemoglobin and Reduce Sickle Cell Formation Blood. 134: 3557-3557. DOI: 10.1182/Blood-2019-125664 |
0.572 |
|
| 2019 |
Khandros E, Huang P, Peslak SA, Giardine B, Zhang Z, Keller CA, Hardison RC, Blobel GA. Understanding Heterogeneity of Fetal Hemoglobin Induction through Comparative Analysis of Stage-Matched F- and a-Cells Blood. 134: 981-981. DOI: 10.1182/Blood-2019-124099 |
0.625 |
|
| 2019 |
Huang P, Peslak SA, Lan X, Khandros E, Sharma M, Qin K, Keller CA, Giardine B, Shi J, Hardison RC, Blobel GA. Heme-Regulated Inhibitor (HRI) Activates Transcription Factor ATF4 to Promote BCL11A Transcription and Fetal Hemoglobin Silencing Blood. 134: 814-814. DOI: 10.1182/Blood-2019-123837 |
0.712 |
|
| 2019 |
Heuston EF, Psaila B, Keller CA, SequencingProgram NC, Anderson SM, Kirby M, Murphy LC, Wixom AQ, Giardine B, Hardison RC, Bodine DM. Mouse Erythroid Cells Originate from a Megakaryocyte Precursor in Common Myeloid Progenitors Blood. 134: 337-337. DOI: 10.1182/Blood-2019-121631 |
0.552 |
|
| 2018 |
Bartman CR, Hamagami N, Keller CA, Giardine B, Hardison RC, Blobel GA, Raj A. Transcriptional Burst Initiation and Polymerase Pause Release Are Key Control Points of Transcriptional Regulation. Molecular Cell. PMID 30554946 DOI: 10.1016/J.Molcel.2018.11.004 |
0.632 |
|
| 2018 |
Grevet JD, Lan X, Hamagami N, Edwards CR, Sankaranarayanan L, Ji X, Bhardwaj SK, Face CJ, Posocco DF, Abdulmalik O, Keller CA, Giardine B, Sidoli S, Garcia BA, Chou ST, et al. Domain-focused CRISPR screen identifies HRI as a fetal hemoglobin regulator in human erythroid cells. Science (New York, N.Y.). 361: 285-290. PMID 30026227 DOI: 10.1126/Science.Aao0932 |
0.584 |
|
| 2018 |
Heuston EF, Keller CA, Lichtenberg J, Giardine B, Anderson SM, Hardison RC, Bodine DM. Establishment of regulatory elements during erythro-megakaryopoiesis identifies hematopoietic lineage-commitment points. Epigenetics & Chromatin. 11: 22. PMID 29807547 DOI: 10.1186/S13072-018-0195-Z |
0.652 |
|
| 2018 |
Behera V, Evans P, Face CJ, Hamagami N, Sankaranarayanan L, Keller CA, Giardine B, Tan K, Hardison RC, Shi J, Blobel GA. Exploiting genetic variation to uncover rules of transcription factor binding and chromatin accessibility. Nature Communications. 9: 782. PMID 29472540 DOI: 10.1038/S41467-018-03082-6 |
0.656 |
|
| 2018 |
Lan X, Khandros E, Grevet JD, Peslak SA, Bhardwaj S, Keller CA, Giardine B, Garcia BA, Hardison RC, Shi J, Blobel GA. Domain-Focused CRISPR-Cas9 Screen Identifies the E3 Ubiquitin Ligase Substrate Adaptor Protein SPOP as a Novel Repressor of Fetal Hemoglobin Blood. 132: 414-414. DOI: 10.1182/Blood-2018-99-119518 |
0.615 |
|
| 2017 |
Huang P, Keller CA, Giardine B, Grevet JD, Davies JOJ, Hughes JR, Kurita R, Nakamura Y, Hardison RC, Blobel GA. Comparative analysis of three-dimensional chromosomal architecture identifies a novel fetal hemoglobin regulatory element. Genes & Development. PMID 28916711 DOI: 10.1101/Gad.303461.117 |
0.643 |
|
| 2017 |
Hsu SC, Gilgenast TG, Bartman CR, Edwards CR, Stonestrom AJ, Huang P, Emerson DJ, Evans P, Werner MT, Keller CA, Giardine B, Hardison RC, Raj A, Phillips-Cremins JE, Blobel GA. The BET Protein BRD2 Cooperates with CTCF to Enforce Transcriptional and Architectural Boundaries. Molecular Cell. 66: 102-116.e7. PMID 28388437 DOI: 10.1016/J.Molcel.2017.02.027 |
0.648 |
|
| 2017 |
Grevet JD, Hamagami N, Lan X, Sankaranarayanan L, Bhardwaj S, Face C, Posocco D, Abdulmalik O, Keller CA, Giardine B, Sidoli S, Garcia B, Chou ST, Hardison RC, Vakoc C, et al. Domain-Focused CRISPR-Cas9 Screen Identifies Hri Kinase As a Regulator of Fetal Hemoglobin in Adult Human Erythroid Cells Blood. 130: 536-536. DOI: 10.1182/Blood.V130.Suppl_1.536.536 |
0.627 |
|
| 2016 |
Hsiung CC, Bartman CR, Huang P, Ginart P, Stonestrom AJ, Keller CA, Face C, Jahn KS, Evans P, Sankaranarayanan L, Giardine B, Hardison RC, Raj A, Blobel GA. A hyperactive transcriptional state marks genome reactivation at the mitosis-G1 transition. Genes & Development. 30: 1423-39. PMID 27340175 DOI: 10.1101/Gad.280859.116 |
0.662 |
|
| 2016 |
Lichtenberg J, Heuston EF, Anderson SM, Sequencing Center NI, Keller CA, Hardison RC, Bodine DM. De Novo DNA Methylation Is Associated with Granulopoiesis and Megakaryopoiesis but Not Erythropoiesis Blood. 128: 3868-3868. DOI: 10.1182/Blood.V128.22.3868.3868 |
0.603 |
|
| 2016 |
Heuston EF, Keller CA, Lichtenberg J, Anderson SM, Sequencing Center NI, Hardison RC, Bodine DM. Establishment of Enhancer Elements during Erythro-Megakaryopoiesis Blood. 128: 1486-1486. DOI: 10.1182/Blood.V128.22.1486.1486 |
0.672 |
|
| 2016 |
Hsu SC, Bartman C, Stonestrom AJ, Edwards CR, Gilgenast T, Emerson D, Huang P, Werner MT, Jahn K, Keller CA, Giardine B, Hardison RC, Raj A, Phillips-Cremins JE, Blobel GA. The BET Protein BRD2 Cooperates with CTCF to Enforce a Transcriptional Boundary in Erythroid Cells Blood. 128: 1034-1034. DOI: 10.1182/Blood.V128.22.1034.1034 |
0.681 |
|
| 2015 |
Lichtenberg J, Heuston EF, Mishra T, Keller CA, Hardison RC, Bodine DM. SBR-Blood: systems biology repository for hematopoietic cells. Nucleic Acids Research. PMID 26590403 DOI: 10.1093/Nar/Gkv1263 |
0.8 |
|
| 2015 |
Han GC, Vinayachandran V, Bataille AR, Park B, Chan-Salis KY, Keller CA, Long M, Mahony S, Hardison RC, Pugh BF. Genome-wide organization of GATA1 and TAL1 determined at high resolution. Molecular and Cellular Biology. PMID 26503782 DOI: 10.1128/Mcb.00806-15 |
0.681 |
|
| 2015 |
Dogan N, Wu W, Morrissey CS, Chen KB, Stonestrom A, Long M, Keller CA, Cheng Y, Jain D, Visel A, Pennacchio LA, Weiss MJ, Blobel GA, Hardison RC. Occupancy by key transcription factors is a more accurate predictor of enhancer activity than histone modifications or chromatin accessibility. Epigenetics & Chromatin. 8: 16. PMID 25984238 DOI: 10.1186/S13072-015-0009-5 |
0.804 |
|
| 2015 |
Jain D, Mishra T, Giardine BM, Keller CA, Morrissey CS, Magargee S, Dorman CM, Long M, Weiss MJ, Hardison RC. Dynamics of GATA1 binding and expression response in a GATA1-induced erythroid differentiation system. Genomics Data. 4: 1-7. PMID 25729644 DOI: 10.1016/J.Gdata.2015.01.008 |
0.795 |
|
| 2015 |
Stonestrom AJ, Hsu SC, Jahn KS, Huang P, Keller CA, Giardine BM, Kadauke S, Campbell AE, Evans P, Hardison RC, Blobel GA. Functions of BET proteins in erythroid gene expression. Blood. 125: 2825-34. PMID 25696920 DOI: 10.1182/Blood-2014-10-607309 |
0.69 |
|
| 2015 |
Hsiung CC, Morrissey CS, Udugama M, Frank CL, Keller CA, Baek S, Giardine B, Crawford GE, Sung MH, Hardison RC, Blobel GA. Genome accessibility is widely preserved and locally modulated during mitosis. Genome Research. 25: 213-25. PMID 25373146 DOI: 10.1101/Gr.180646.114 |
0.837 |
|
| 2015 |
Blobel GA, Hsiung CC, Huang P, Keller C, Ginart P, Jahn K, Bartman C, Stonestrom AJ, Evans P, Giardine B, Hardison RC, Raj A. A Hyperactive Transcriptional State Marks Genome Reactivation during Mitotic Exit Blood. 126: 48-48. DOI: 10.1182/Blood.V126.23.48.48 |
0.71 |
|
| 2015 |
Heuston EF, Keller CA, Anderson SM, Sequencing Center NI, Hardison RC, Bodine DM. Enhancer Accessibility during Erythropoiesis and Megakaryopoiesis Correlates with Lineage-Specific Gene Expression Blood. 126: 3576-3576. DOI: 10.1182/Blood.V126.23.3576.3576 |
0.666 |
|
| 2015 |
Lichtenberg J, Heuston EF, Keller CA, Hardison RC, Bodine DM. Comparison of Expression and Epigenetic Profiles in Human and Mouse Erythropoiesis and Megakaryopoiesis Using a Systems Biology Model Blood. 126: 2383-2383. DOI: 10.1182/Blood.V126.23.2383.2383 |
0.701 |
|
| 2014 |
Cheng Y, Ma Z, Kim BH, Wu W, Cayting P, Boyle AP, Sundaram V, Xing X, Dogan N, Li J, Euskirchen G, Lin S, Lin Y, Visel A, Kawli T, ... ... Keller CA, et al. Principles of regulatory information conservation between mouse and human. Nature. 515: 371-5. PMID 25409826 DOI: 10.1038/Nature13985 |
0.833 |
|
| 2014 |
Yue F, Cheng Y, Breschi A, Vierstra J, Wu W, Ryba T, Sandstrom R, Ma Z, Davis C, Pope BD, Shen Y, Pervouchine DD, Djebali S, Thurman RE, Kaul R, ... ... Keller CA, et al. A comparative encyclopedia of DNA elements in the mouse genome. Nature. 515: 355-64. PMID 25409824 DOI: 10.1038/Nature13992 |
0.808 |
|
| 2014 |
Pimkin M, Kossenkov AV, Mishra T, Morrissey CS, Wu W, Keller CA, Blobel GA, Lee D, Beer MA, Hardison RC, Weiss MJ. Divergent functions of hematopoietic transcription factors in lineage priming and differentiation during erythro-megakaryopoiesis. Genome Research. 24: 1932-44. PMID 25319996 DOI: 10.1101/Gr.164178.113 |
0.823 |
|
| 2014 |
Wu W, Morrissey CS, Keller CA, Mishra T, Pimkin M, Blobel GA, Weiss MJ, Hardison RC. Dynamic shifts in occupancy by TAL1 are guided by GATA factors and drive large-scale reprogramming of gene expression during hematopoiesis. Genome Research. 24: 1945-62. PMID 25319994 DOI: 10.1101/Gr.164830.113 |
0.821 |
|
| 2014 |
Hsiung CC, Morrissey C, Udugama M, Frank C, Keller CA, Baek S, Giardine B, Crawford GE, Sung M, Raj A, Hardison RC, Blobel GA. Epigenetics of Cellular Memory: Insights from the Chromatin Accessibility Landscape of the Mitotic Genome Blood. 124: 4342-4342. DOI: 10.1182/Blood.V124.21.4342.4342 |
0.854 |
|
| 2012 |
Stamatoyannopoulos JA, Snyder M, Hardison R, Ren B, Gingeras T, Gilbert DM, Groudine M, Bender M, Kaul R, Canfield T, Giste E, Johnson A, Zhang M, Balasundaram G, ... ... Keller CA, et al. An encyclopedia of mouse DNA elements (Mouse ENCODE). Genome Biology. 13: 418. PMID 22889292 DOI: 10.1186/Gb-2012-13-8-418 |
0.718 |
|
| 2011 |
Wu W, Cheng Y, Keller CA, Ernst J, Kumar SA, Mishra T, Morrissey C, Dorman CM, Chen KB, Drautz D, Giardine B, Shibata Y, Song L, Pimkin M, Crawford GE, et al. Dynamics of the epigenetic landscape during erythroid differentiation after GATA1 restoration. Genome Research. 21: 1659-71. PMID 21795386 DOI: 10.1101/Gr.125088.111 |
0.829 |
|
| 2001 |
Balagopalan L, Keller CA, Abmayr SM. Loss-of-function mutations reveal that the Drosophila nautilus gene is not essential for embryonic myogenesis or viability Developmental Biology. 231: 374-382. PMID 11237466 DOI: 10.1006/Dbio.2001.0162 |
0.321 |
|
| 1998 |
Abmayr SM, Keller CA. Drosophila myogenesis and insights into the role of nautilus Current Topics in Developmental Biology. 38: 35-80. PMID 9399076 DOI: 10.1016/S0070-2153(08)60244-6 |
0.451 |
|
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