Robert P de Vries - Publications

Affiliations: 
Utrecht University, Utrecht, Netherlands 
Area:
Glycoscience, virology, sialic acid, influenza, glycan-array

53 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Canales A, Sastre J, Orduña JM, Spruit CM, Pérez-Castells J, Domínguez G, Bouwman KM, van der Woude R, Cañada FJ, Nycholat CM, Paulson JC, Boons GJ, Jiménez-Barbero J, de Vries RP. Revealing the Specificity of Human H1 Influenza A Viruses to Complex -Glycans. Jacs Au. 3: 868-878. PMID 37006776 DOI: 10.1021/jacsau.2c00664  0.407
2023 Zaree P, Tomris I, de Vos SD, van der Woude R, Flesch FM, Klein Gebbink RJM, de Vries RP, Pieters RJ. Facile electrochemical affinity measurements of small and large molecules. Rsc Advances. 13: 9756-9760. PMID 36994086 DOI: 10.1039/d3ra01029e  0.488
2023 Scheibner D, Salaheldin AH, Bagato O, Zaeck LM, Mostafa A, Blohm U, Müller C, Eweas AF, Franzke K, Karger A, Schäfer A, Gischke M, Hoffmann D, Lerolle S, Li X, ... ... de Vries RP, et al. Phenotypic effects of mutations observed in the neuraminidase of human origin H5N1 influenza A viruses. Plos Pathogens. 19: e1011135. PMID 36745654 DOI: 10.1371/journal.ppat.1011135  0.659
2022 de Jong SPJ, Felix Garza ZC, Gibson JC, Han AX, van Leeuwen S, de Vries RP, Boons GJ, van Hoesel M, de Haan K, van Groeningen LE, Hulme KD, van Willigen HDG, Wynberg E, de Bree GJ, Matser A, et al. Potential impacts of prolonged absence of influenza virus circulation on subsequent epidemics. Medrxiv : the Preprint Server For Health Sciences. PMID 36415458 DOI: 10.1101/2022.02.05.22270494  0.631
2022 Tomris I, Unione L, Nguyen L, Zaree P, Bouwman KM, Liu L, Li Z, Fok JA, Ríos Carrasco M, van der Woude R, Kimpel ALM, Linthorst MW, Verpalen ECJM, Caniels TG, Sanders RW, ... ... de Vries RP, et al. The SARS-CoV-2 spike N-terminal domain engages 9- -acetylated α2-8-linked sialic acids. Biorxiv : the Preprint Server For Biology. PMID 36263070 DOI: 10.1101/2022.09.14.507904  0.703
2022 Tomris I, Bouwman KM, Adolfs Y, Noack D, van der Woude R, Kerster G, Herfst S, Sanders RW, van Gils MJ, Boons GJ, Haagmans BL, Pasterkamp RJ, Rockx B, de Vries RP. Distinct spatial arrangements of ACE2 and TMPRSS2 expression in Syrian hamster lung lobes dictates SARS-CoV-2 infection patterns. Plos Pathogens. 18: e1010340. PMID 35255100 DOI: 10.1371/journal.ppat.1010340  0.467
2022 Gaide N, Lucas MN, Delpont M, Croville G, Bouwman KM, Papanikolaou A, van der Woude R, Gagarinov IA, Boons GJ, De Vries RP, Volmer R, Teillaud A, Vergne T, Bleuart C, Le Loc'h G, et al. Pathobiology of highly pathogenic H5 avian influenza viruses in naturally infected Galliformes and Anseriformes in France during winter 2015-2016. Veterinary Research. 53: 11. PMID 35164866 DOI: 10.1186/s13567-022-01028-x  0.667
2022 Spruit CM, Zhu X, Tomris I, Carrasco MR, Han AX, Broszeit F, van der Woude R, Bouwman KM, Luu MMT, Matsuno K, Sakoda Y, Russell CA, Wilson IA, Boons GJ, de Vries RP. N-glycolylneuraminic acid binding of avian and equine H7 influenza A viruses. Journal of Virology. jvi0212021. PMID 35044215 DOI: 10.1128/jvi.02120-21  0.743
2022 Li Z, Unione L, Liu L, Lang Y, de Vries RP, de Groot RJ, Boons GJ. Synthetic -Acetylated Sialosides and their Acetamido-deoxy Analogues as Probes for Coronaviral Hemagglutinin-esterase Recognition. Journal of the American Chemical Society. 144: 424-435. PMID 34967208 DOI: 10.1021/jacs.1c10329  0.63
2021 Nemanichvili N, Berends AJ, Tomris I, Barnard KN, Parrish CR, Gröne A, Rijks JM, Verheije MH, de Vries RP. Influenza D binding properties vary amongst the two major virus clades and wildlife species. Veterinary Microbiology. 264: 109298. PMID 34906835 DOI: 10.1016/j.vetmic.2021.109298  0.414
2021 Nguyen L, McCord KA, Bui DT, Bouwman KM, Kitova EN, Elaish M, Kumawat D, Daskhan GC, Tomris I, Han L, Chopra P, Yang TJ, Willows SD, Mason AL, Mahal LK, ... ... de Vries RP, et al. Sialic acid-containing glycolipids mediate binding and viral entry of SARS-CoV-2. Nature Chemical Biology. PMID 34754101 DOI: 10.1038/s41589-021-00924-1  0.629
2021 Arunkumar GA, Bhavsar D, Li T, Strohmeier S, Chromikova V, Amanat F, Bunyatov M, Wilson PC, Ellebedy AH, Boons GJ, Simon V, de Vries RP, Krammer F. Functionality of the putative surface glycoproteins of the Wuhan spiny eel influenza virus. Nature Communications. 12: 6161. PMID 34697321 DOI: 10.1038/s41467-021-26409-2  0.655
2021 Broszeit F, van Beek RJ, Unione L, Bestebroer TM, Chapla D, Yang JY, Moremen KW, Herfst S, Fouchier RAM, de Vries RP, Boons GJ. Glycan remodeled erythrocytes facilitate antigenic characterization of recent A/H3N2 influenza viruses. Nature Communications. 12: 5449. PMID 34521834 DOI: 10.1038/s41467-021-25713-1  0.73
2021 Liu L, Chopra P, Li X, Bouwman KM, Tompkins SM, Wolfert MA, de Vries RP, Boons GJ. Heparan Sulfate Proteoglycans as Attachment Factor for SARS-CoV-2. Acs Central Science. 7: 1009-1018. PMID 34235261 DOI: 10.1021/acscentsci.1c00010  0.581
2021 Spruit CM, Nemanichvili N, Okamatsu M, Takematsu H, Boons GJ, de Vries RP. N-Glycolylneuraminic Acid in Animal Models for Human Influenza A Virus. Viruses. 13. PMID 34062844 DOI: 10.3390/v13050815  0.637
2021 Bouwman KM, Tomris I, Turner HL, van der Woude R, Shamorkina TM, Bosman GP, Rockx B, Herfst S, Snijder J, Haagmans BL, Ward AB, Boons GJ, de Vries RP. Multimerization- and glycosylation-dependent receptor binding of SARS-CoV-2 spike proteins. Plos Pathogens. 17: e1009282. PMID 33556147 DOI: 10.1371/journal.ppat.1009282  0.607
2020 Overeem NJ, Hamming PHE, Grant OC, Di Iorio D, Tieke M, Bertolino MC, Li Z, Vos G, de Vries RP, Woods RJ, Tito NB, Boons GPH, van der Vries E, Huskens J. Hierarchical Multivalent Effects Control Influenza Host Specificity. Acs Central Science. 6: 2311-2318. PMID 33376792 DOI: 10.1021/acscentsci.0c01175  0.769
2020 van der Woude R, Turner HL, Tomris I, Bouwman KM, Ward AB, de Vries RP. Drivers of recombinant soluble influenza A virus hemagglutinin and neuraminidase expression in mammalian cells. Protein Science : a Publication of the Protein Society. PMID 32710576 DOI: 10.1002/pro.3918  0.461
2020 Eggink D, Spronken M, van der Woude R, Buzink J, Broszeit F, McBride R, Pawestri HA, Setiawaty V, Paulson JC, Boons GJ, Fouchier RAM, Russell CA, de Jong MD, de Vries RP. Phenotypic effects of substitutions within the receptor binding site of highly pathogenic avian influenza H5N1 observed during human infection. Journal of Virology. PMID 32321815 DOI: 10.1128/Jvi.00195-20  0.772
2020 Figueroa T, Bessière P, Coggon A, Bouwman KM, van der Woude R, Delverdier M, Verheije MH, de Vries RP, Volmer R. THE MICROBIOTA CONTRIBUTES TO THE CONTROL OF HIGHLY PATHOGENIC H5N9 INFLUENZA VIRUS REPLICATION IN DUCKS. Journal of Virology. PMID 32102887 DOI: 10.1128/JVI.00289-20  0.476
2020 Kikutani Y, Okamatsu M, Nishihara S, Takase-Yoden S, Hiono T, de Vries RP, McBride R, Matsuno K, Kida H, Sakoda Y. E190V substitution of H6 hemagglutinin is one of key factors for binding to sulfated sialylated glycan receptor and infection to chickens. Microbiology and Immunology. 64: 304-312. PMID 31943329 DOI: 10.1111/1348-0421.12773  0.578
2019 Parsons L, An Y, Qi L, White M, van der Woude R, Hartshorn K, Taubenberger JK, de Vries RP, Cipollo JF. Influenza Hemagglutinins H2, H5, H6, and H11 are not Targets of Pulmonary Surfactant Protein D: N-glycan subtypes in host-pathogen interactions. Journal of Virology. PMID 31826991 DOI: 10.1128/JVI.01951-19  0.474
2019 Bouwman KM, Parsons LM, Berends AJ, de Vries RP, Cipollo JF, Verheije MH. Three Amino Acid Changes In Avian Coronavirus Spike Protein Allows Binding To Kidney Tissue. Journal of Virology. PMID 31694947 DOI: 10.1128/JVI.01363-19  0.421
2019 Lu W, Du W, Somovilla VJ, Yu G, Haksar D, de Vries E, Boons GJ, de Vries RP, de Haan CAM, Pieters RJ. Enhanced Inhibition of Influenza A Virus Adhesion by Di- and Trivalent Hemagglutinin Inhibitors. Journal of Medicinal Chemistry. PMID 31251606 DOI: 10.1021/Acs.Jmedchem.9B00303  0.71
2019 Broszeit F, Tzarum N, Zhu X, Nemanichvili N, Eggink D, Leenders T, Li Z, Liu L, Wolfert MA, Papanikolaou A, Martínez-Romero C, Gagarinov IA, Yu W, García-Sastre A, Wennekes T, ... ... de Vries RP, et al. N-Glycolylneuraminic Acid as a Receptor for Influenza A Viruses. Cell Reports. 27: 3284-3294.e6. PMID 31189111 DOI: 10.1016/J.Celrep.2019.05.048  0.723
2019 Boons GJ, Gagarinov IA, Li T, Wei N, Sastre Toraño J, de Vries RP, Wolfert MA. Protecting Group-Controlled Enzymatic Glycosylation of Oligo-N-Acetyllactosamine Derivatives. Angewandte Chemie (International Ed. in English). PMID 31108002 DOI: 10.1002/Anie.201903140  0.465
2019 Parsons L, Bouwman KM, Azurmendi HF, de Vries RP, Cipollo JF, Verheije MH. Glycosylation of the viral attachment protein of avian coronavirus is essential for host cell and receptor binding. The Journal of Biological Chemistry. PMID 30902814 DOI: 10.1074/jbc.RA119.007532  0.463
2019 Thompson AJ, de Vries RP, Paulson JC. Virus recognition of glycan receptors. Current Opinion in Virology. 34: 117-129. PMID 30849709 DOI: 10.1016/J.Coviro.2019.01.004  0.599
2019 Bouwman KM, Delpont M, Broszeit F, Berger R, Weerts EAWS, Lucas MN, Delverdier M, Belkasmi S, Papanikolaou A, Boons GJ, Guérin JL, de Vries RP, Ducatez MF, Verheije MH. Guinea Fowl Coronavirus Diversity has Phenotypic Consequences for Glycan and Tissue Binding. Journal of Virology. PMID 30842318 DOI: 10.1128/Jvi.00067-19  0.582
2018 Nemanichvili N, Tomris I, Turner HL, McBride R, Grant OC, van der Woude R, Aldosari MH, Pieters RJ, Woods RJ, Paulson JC, Boons GJ, Ward AB, Verheije MH, de Vries RP. Fluorescent Trimeric Hemagglutinins Reveal Multivalent Receptor Binding Properties. Journal of Molecular Biology. PMID 30597163 DOI: 10.1016/J.Jmb.2018.12.014  0.792
2018 Peng W, Bouwman KM, McBride R, Grant OC, Woods RJ, Verheije MH, Paulson JC, de Vries RP. Enhanced human-type receptor binding by ferret transmissible H5N1 with a K193T mutation. Journal of Virology. PMID 29491160 DOI: 10.1128/Jvi.02016-17  0.8
2017 de Vries RP, Tzarum N, Peng W, Thompson AJ, Ambepitiya Wickramasinghe IN, de la Pena ATT, van Breemen MJ, Bouwman KM, Zhu X, McBride R, Yu W, Sanders RW, Verheije MH, Wilson IA, Paulson JC. A single mutation in Taiwanese H6N1 influenza hemagglutinin switches binding to human-type receptors. Embo Molecular Medicine. PMID 28694323 DOI: 10.15252/Emmm.201707726  0.75
2017 de Vries RP, Peng W, Grant OC, Thompson AJ, Zhu X, Bouwman KM, de la Pena ATT, van Breemen MJ, Ambepitiya Wickramasinghe IN, de Haan CAM, Yu W, McBride R, Sanders RW, Woods RJ, Verheije MH, et al. Three mutations switch H7N9 influenza to human-type receptor specificity. Plos Pathogens. 13: e1006390. PMID 28617868 DOI: 10.1371/Journal.Ppat.1006390  0.781
2017 Tzarum N, de Vries RP, Peng W, Thompson AJ, Bouwman KM, McBride R, Yu W, Zhu X, Verheije MH, Paulson JC, Wilson IA. The 150-Loop Restricts the Host Specificity of Human H10N8 Influenza Virus. Cell Reports. 19: 235-245. PMID 28402848 DOI: 10.1016/J.Celrep.2017.03.054  0.74
2016 Peng W, de Vries RP, Grant OC, Thompson AJ, McBride R, Tsogtbaatar B, Lee PS, Razi N, Wilson IA, Woods RJ, Paulson JC. Recent H3N2 Viruses Have Evolved Specificity for Extended, Branched Human-type Receptors, Conferring Potential for Increased Avidity. Cell Host & Microbe. PMID 28017661 DOI: 10.1016/J.Chom.2016.11.004  0.791
2016 McBride R, Paulson JC, de Vries RP. A Miniaturized Glycan Microarray Assay for Assessing Avidity and Specificity of Influenza A Virus Hemagglutinins. Journal of Visualized Experiments : Jove. PMID 27284789 DOI: 10.3791/53847  0.689
2015 Hiono T, Okamatsu M, Igarashi M, McBride R, de Vries RP, Peng W, Paulson JC, Sakoda Y, Kida H. Amino acid residues at positions 222 and 227 of the hemagglutinin together with the neuraminidase determine binding of H5 avian influenza viruses to sialyl Lewis X. Archives of Virology. PMID 26542967 DOI: 10.1007/S00705-015-2660-3  0.71
2015 Wickramasinghe IN, de Vries RP, Eggert AM, Wandee N, de Haan CA, Gröne A, Verheije MH. Host tissue and glycan binding specificities of avian viral attachment proteins using novel avian tissue microarrays. Plos One. 10: e0128893. PMID 26035584 DOI: 10.1371/journal.pone.0128893  0.429
2015 Zhang H, de Vries RP, Tzarum N, Zhu X, Yu W, McBride R, Paulson JC, Wilson IA. A human-infecting H10N8 influenza virus retains a strong preference for avian-type receptors. Cell Host & Microbe. 17: 377-84. PMID 25766296 DOI: 10.1016/J.Chom.2015.02.006  0.765
2015 Tzarum N, de Vries RP, Zhu X, Yu W, McBride R, Paulson JC, Wilson IA. Structure and receptor binding of the hemagglutinin from a human H6N1 influenza virus. Cell Host & Microbe. 17: 369-76. PMID 25766295 DOI: 10.1016/J.Chom.2015.02.005  0.768
2014 de Vries RP, Zhu X, McBride R, Rigter A, Hanson A, Zhong G, Hatta M, Xu R, Yu W, Kawaoka Y, de Haan CA, Wilson IA, Paulson JC. Hemagglutinin receptor specificity and structural analyses of respiratory droplet-transmissible H5N1 viruses. Journal of Virology. 88: 768-73. PMID 24173215 DOI: 10.1128/Jvi.02690-13  0.732
2013 Xu R, de Vries RP, Zhu X, Nycholat CM, McBride R, Yu W, Paulson JC, Wilson IA. Preferential recognition of avian-like receptors in human influenza A H7N9 viruses. Science (New York, N.Y.). 342: 1230-5. PMID 24311689 DOI: 10.1126/Science.1243761  0.751
2013 Nycholat CM, Peng W, McBride R, Antonopoulos A, de Vries RP, Polonskaya Z, Finn MG, Dell A, Haslam SM, Paulson JC. Synthesis of biologically active N- and O-linked glycans with multisialylated poly-N-acetyllactosamine extensions using P. damsela α2-6 sialyltransferase. Journal of the American Chemical Society. 135: 18280-3. PMID 24256304 DOI: 10.1021/Ja409781C  0.496
2013 de Vries RP, de Vries E, Martínez-Romero C, McBride R, van Kuppeveld FJ, Rottier PJ, García-Sastre A, Paulson JC, de Haan CA. Evolution of the hemagglutinin protein of the new pandemic H1N1 influenza virus: maintaining optimal receptor binding by compensatory substitutions. Journal of Virology. 87: 13868-77. PMID 24109242 DOI: 10.1128/Jvi.01955-13  0.773
2013 Wang Z, Chinoy ZS, Ambre SG, Peng W, McBride R, de Vries RP, Glushka J, Paulson JC, Boons GJ. A general strategy for the chemoenzymatic synthesis of asymmetrically branched N-glycans. Science (New York, N.Y.). 341: 379-83. PMID 23888036 DOI: 10.1126/Science.1236231  0.646
2013 Watanabe T, Kiso M, Fukuyama S, Nakajima N, Imai M, Yamada S, Murakami S, Yamayoshi S, Iwatsuki-Horimoto K, Sakoda Y, Takashita E, McBride R, Noda T, Hatta M, Imai H, ... ... de Vries RP, et al. Characterization of H7N9 influenza A viruses isolated from humans. Nature. 501: 551-5. PMID 23842494 DOI: 10.1038/Nature12392  0.678
2013 Paulson JC, de Vries RP. H5N1 receptor specificity as a factor in pandemic risk. Virus Research. 178: 99-113. PMID 23619279 DOI: 10.1016/J.Virusres.2013.02.015  0.713
2012 Cornelissen LA, de Leeuw OS, Tacken MG, Klos HC, de Vries RP, de Boer-Luijtze EA, van Zoelen-Bos DJ, Rigter A, Rottier PJ, Moormann RJ, de Haan CA. Protective efficacy of Newcastle disease virus expressing soluble trimeric hemagglutinin against highly pathogenic H5N1 influenza in chickens and mice. Plos One. 7: e44447. PMID 22952980 DOI: 10.1371/journal.pone.0044447  0.459
2012 de Vries E, de Vries RP, Wienholts MJ, Floris CE, Jacobs MS, van den Heuvel A, Rottier PJ, de Haan CA. Influenza A virus entry into cells lacking sialylated N-glycans. Proceedings of the National Academy of Sciences of the United States of America. 109: 7457-62. PMID 22529385 DOI: 10.1073/pnas.1200987109  0.501
2011 de Vries RP, de Vries E, Moore KS, Rigter A, Rottier PJ, de Haan CA. Only two residues are responsible for the dramatic difference in receptor binding between swine and new pandemic H1 hemagglutinin. The Journal of Biological Chemistry. 286: 5868-75. PMID 21173148 DOI: 10.1074/jbc.M110.193557  0.525
2010 Bosch BJ, Bodewes R, de Vries RP, Kreijtz JH, Bartelink W, van Amerongen G, Rimmelzwaan GF, de Haan CA, Osterhaus AD, Rottier PJ. Recombinant soluble, multimeric HA and NA exhibit distinctive types of protection against pandemic swine-origin 2009 A(H1N1) influenza virus infection in ferrets. Journal of Virology. 84: 10366-74. PMID 20686020 DOI: 10.1128/JVI.01035-10  0.391
2010 Cornelissen LAHM, de Vries RP, de Boer-Luijtze EA, Rigter A, Rottier PJM, de Haan CAM. A single immunization with soluble recombinant trimeric hemagglutinin protects chickens against highly pathogenic avian influenza virus H5N1 Plos One. 5. PMID 20498717 DOI: 10.1371/journal.pone.0010645  0.441
2010 de Vries RP, de Vries E, Bosch BJ, de Groot RJ, Rottier PJ, de Haan CA. The influenza A virus hemagglutinin glycosylation state affects receptor-binding specificity. Virology. 403: 17-25. PMID 20441997 DOI: 10.1016/j.virol.2010.03.047  0.534
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