Emre Karakoc, Ph.D.

Affiliations: 
Genome Sciences University of Washington, Seattle, Seattle, WA 
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"Emre Karakoc"
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Lin YL, Pavlidis P, Karakoc E, et al. (2015) The evolution and functional impact of human deletion variants shared with archaic hominin genomes. Molecular Biology and Evolution. 32: 1008-19
Dao P, Numanagi? I, Lin YY, et al. (2014) ORMAN: optimal resolution of ambiguous RNA-Seq multimappings in the presence of novel isoforms. Bioinformatics (Oxford, England). 30: 644-51
Krumm N, O'Roak BJ, Karakoc E, et al. (2013) Transmission disequilibrium of small CNVs in simplex autism. American Journal of Human Genetics. 93: 595-606
Korvatska O, Strand NS, Berndt JD, et al. (2013) Altered splicing of ATP6AP2 causes X-linked parkinsonism with spasticity (XPDS). Human Molecular Genetics. 22: 3259-68
Prüfer K, Munch K, Hellmann I, et al. (2012) The bonobo genome compared with the chimpanzee and human genomes. Nature. 486: 527-31
O'Roak BJ, Vives L, Girirajan S, et al. (2012) Sporadic autism exomes reveal a highly interconnected protein network of de novo mutations. Nature. 485: 246-50
Scally A, Dutheil JY, Hillier LW, et al. (2012) Insights into hominid evolution from the gorilla genome sequence. Nature. 483: 169-75
Karakoc E, Alkan C, O'Roak BJ, et al. (2012) Detection of structural variants and indels within exome data. Nature Methods. 9: 176-8
O'Roak BJ, Deriziotis P, Lee C, et al. (2012) Corrigendum: Exome sequencing in sporadic autism spectrum disorders identifies severe de novo mutations (Nature Genetics (2011) 43, (585-589)) Nature Genetics. 44: 471
O'Roak BJ, Deriziotis P, Lee C, et al. (2011) Exome sequencing in sporadic autism spectrum disorders identifies severe de novo mutations. Nature Genetics. 43: 585-9
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