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Lude Hendrikus Franke grad student 2014 RUG
 (Interpreting disease genetics using functional genomics.)
Cisca (Tjitske Nienke) Wijmenga grad student 2014 RUG
Soumya Raychaudhuri post-doc Brigham & Women's Hospital, Harvard Medical School
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Publications

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Wu J, Palasantzas V, Andreu-Sánchez S, et al. (2024) Epigenome-wide association study on the plasma metabolome suggests self-regulation of the glycine and serine pathway through DNA methylation. Clinical Epigenetics. 16: 104
Urzúa-Traslaviña CG, van Lieshout T, Boulogne F, et al. (2024) Co-expression in tissue-specific gene networks links genes in cancer-susceptibility loci to known somatic driver genes. Bmc Medical Genomics. 17: 186
Kim T, Martínez-Bonet M, Wang Q, et al. (2024) Non-coding autoimmune risk variant defines role for ICOS in T peripheral helper cell development. Nature Communications. 15: 2150
Vochteloo M, Deelen P, Vink B, et al. (2024) PICALO: principal interaction component analysis for the identification of discrete technical, cell-type, and environmental factors that mediate eQTLs. Genome Biology. 25: 29
Li S, Schmid KT, de Vries DH, et al. (2023) Identification of genetic variants that impact gene co-expression relationships using large-scale single-cell data. Genome Biology. 24: 80
de Klein N, Tsai EA, Vochteloo M, et al. (2023) Brain expression quantitative trait locus and network analyses reveal downstream effects and putative drivers for brain-related diseases. Nature Genetics
Boulogne F, Claus LR, Wiersma H, et al. (2023) KidneyNetwork: using kidney-derived gene expression data to predict and prioritize novel genes involved in kidney disease. European Journal of Human Genetics : Ejhg
Oelen R, de Vries DH, Brugge H, et al. (2022) Single-cell RNA-sequencing of peripheral blood mononuclear cells reveals widespread, context-specific gene expression regulation upon pathogenic exposure. Nature Communications. 13: 3267
van Rheenen W, van der Spek RAA, Bakker MK, et al. (2022) Author Correction: Common and rare variant association analyses in amyotrophic lateral sclerosis identify 15 risk loci with distinct genetic architectures and neuron-specific biology. Nature Genetics
van Rheenen W, van der Spek RAA, Bakker MK, et al. (2021) Common and rare variant association analyses in amyotrophic lateral sclerosis identify 15 risk loci with distinct genetic architectures and neuron-specific biology. Nature Genetics. 53: 1636-1648
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