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Edwin Antony, Ph.D. - Publications

Affiliations: 
2005 Wesleyan University, Middletown, CT, United States 
Area:
Molecular Biology, Biochemistry, General Biophysics
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47 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Kuppa S, Corless E, Caldwell CC, Spies M, Antony E. Generation of site-specifically labelled fluorescent human XPA to investigate DNA binding dynamics during nucleotide excision repair. Methods (San Diego, Calif.). 224: 47-53. PMID 38387709 DOI: 10.1016/j.ymeth.2024.02.006  0.551
2024 Pangeni S, Biswas G, Kaushik V, Kuppa S, Yang O, Lin CT, Mishra G, Levy Y, Antony E, Ha T. Rapid long-distance migration of RPA on single stranded DNA occurs through intersegmental transfer utilizing multivalent interactions. Journal of Molecular Biology. 168491. PMID 38360091 DOI: 10.1016/j.jmb.2024.168491  0.588
2024 Kaushik V, Chadda R, Kuppa S, Pokhrel N, Vayyeti A, Grady S, Arnatt C, Antony E. Fluorescent human RPA to track assembly dynamics on DNA. Methods (San Diego, Calif.). 223: 95-105. PMID 38301751 DOI: 10.1016/j.ymeth.2024.01.019  0.568
2023 Kaushik V, Chadda R, Kuppa S, Pokhrel N, Vayyeti A, Grady S, Arnatt C, Antony E. Fluorescent human RPA to track assembly dynamics on DNA. Biorxiv : the Preprint Server For Biology. PMID 38045304 DOI: 10.1101/2023.11.23.568455  0.578
2023 Deveryshetty J, Chadda R, Mattice JR, Karunakaran S, Rau MJ, Basore K, Pokhrel N, Englander N, Fitzpatrick JAJ, Bothner B, Antony E. Yeast Rad52 is a homodecamer and possesses BRCA2-like bipartite Rad51 binding modes. Nature Communications. 14: 6215. PMID 37798272 DOI: 10.1038/s41467-023-41993-1  0.473
2023 Hoitsma NM, Norris J, Khoang TH, Kaushik V, Chadda R, Antony E, Hedglin M, Freudenthal BD. Mechanistic insight into AP-endonuclease 1 cleavage of abasic sites at stalled replication fork mimics. Nucleic Acids Research. PMID 37264933 DOI: 10.1093/nar/gkad481  0.43
2023 Roshan P, Kuppa S, Mattice JR, Kaushik V, Chadda R, Pokhrel N, Tumala BR, Biswas A, Bothner B, Antony E, Origanti S. An Aurora B-RPA signaling axis secures chromosome segregation fidelity. Nature Communications. 14: 3008. PMID 37230964 DOI: 10.1038/s41467-023-38711-2  0.406
2023 Norris JL, Rogers LO, Pytko KG, Dannenberg RL, Perreault S, Kaushik V, Kuppa S, Antony E, Hedglin M. Interplay of macromolecular interactions during assembly of human DNA polymerase δ holoenzymes and initiation of DNA synthesis. Biorxiv : the Preprint Server For Biology. PMID 37215012 DOI: 10.1101/2023.05.09.539896  0.483
2023 Granger SL, Sharma R, Kaushik V, Razzaghi M, Honda M, Bhat DS, Wlodarski MW, Antony E, Spies M. Human hnRNPA1 reorganizes telomere-bound Replication Protein A. Biorxiv : the Preprint Server For Biology. PMID 37214874 DOI: 10.1101/2023.05.09.540056  0.549
2023 Deveryshetty J, Chadda R, Mattice J, Karunakaran S, Rau MJ, Basore K, Pokhrel N, Englander N, Fitzpatrick JAJ, Bothner B, Antony E. C-terminus induced asymmetry within a Rad52 homodecamer dictates single-position Rad51 nucleation in homologous recombination. Biorxiv : the Preprint Server For Biology. PMID 36778491 DOI: 10.1101/2023.02.05.527205  0.428
2022 Kuppa S, Deveryshetty J, Chadda R, Mattice JR, Pokhrel N, Kaushik V, Patterson A, Dhingra N, Pangeni S, Sadauskas MK, Shiekh S, Balci H, Ha T, Zhao X, Bothner B, ... Antony E, et al. Rtt105 regulates RPA function by configurationally stapling the flexible domains. Nature Communications. 13: 5152. PMID 36056028 DOI: 10.1038/s41467-022-32860-6  0.632
2022 Hormeno S, Wilkinson OJ, Aicart-Ramos C, Kuppa S, Antony E, Dillingham MS, Moreno-Herrero F. Human HELB is a processive motor protein that catalyzes RPA clearance from single-stranded DNA. Proceedings of the National Academy of Sciences of the United States of America. 119: e2112376119. PMID 35385349 DOI: 10.1073/pnas.2112376119  0.589
2021 Graziano S, Coll-Bonfill N, Teodoro-Castro B, Kuppa S, Jackson J, Shashkova E, Mahajan U, Vindigni A, Antony E, Gonzalo S. Lamin-A/C recruits ssDNA protective proteins RPA and RAD51 to stalled replication forks to maintain fork stability. The Journal of Biological Chemistry. 101301. PMID 34648766 DOI: 10.1016/j.jbc.2021.101301  0.364
2021 Bednar RM, Jana S, Kuppa S, Franklin R, Beckman J, Antony E, Cooley RB, Mehl RA. Genetic Incorporation of Two Mutually Orthogonal Bioorthogonal Amino Acids That Enable Efficient Protein Dual-Labeling in Cells. Acs Chemical Biology. PMID 34590824 DOI: 10.1021/acschembio.1c00649  0.319
2021 Kuppa S, Pokhrel N, Corless E, Origanti S, Antony E. Generation of Fluorescent Versions of Saccharomyces cerevisiae RPA to Study the Conformational Dynamics of Its ssDNA-Binding Domains. Methods in Molecular Biology (Clifton, N.J.). 2281: 151-168. PMID 33847957 DOI: 10.1007/978-1-0716-1290-3_9  0.574
2021 Dhingra N, Kuppa S, Wei L, Pokhrel N, Baburyan S, Meng X, Antony E, Zhao X. The Srs2 helicase dampens DNA damage checkpoint by recycling RPA from chromatin. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33602817 DOI: 10.1073/pnas.2020185118  0.436
2021 Ahmad F, Patterson A, Deveryshetty J, Mattice JR, Pokhrel N, Bothner B, Antony E. Hydrogen-deuterium exchange reveals a dynamic DNA-binding map of replication protein A. Nucleic Acids Research. PMID 33444457 DOI: 10.1093/nar/gkaa1288  0.588
2020 Corless EI, Saad Imran SM, Watkins MB, Bacik JP, Mattice J, Patterson A, Danyal K, Soffe M, Kitelinger R, Seefeldt LC, Origanti SS, Bennett B, Bothner B, Ando N, Antony E. The flexible N-terminus of BchL autoinhibits activity through interaction with its [4Fe-4S] cluster and relieved upon ATP binding. The Journal of Biological Chemistry. 100107. PMID 33434584 DOI: 10.1074/jbc.RA120.016278  0.35
2020 Corless EI, Saad Imran SM, Watkins MB, Bacik JP, Mattice J, Patterson A, Danyal K, Soffe M, Kitelinger R, Seefeldt LC, Origanti SS, Bennett B, Bothner B, Ando N, Antony E. The flexible N-terminus of BchL autoinhibits activity through interaction with its [4Fe-4S] cluster and relieved upon ATP binding. The Journal of Biological Chemistry. PMID 33219127 DOI: 10.1074/jbc.RA120.016278  0.35
2019 Pokhrel N, Caldwell CC, Corless EI, Tillison EA, Tibbs J, Jocic N, Tabei SMA, Wold MS, Spies M, Antony E. Dynamics and selective remodeling of the DNA-binding domains of RPA. Nature Structural & Molecular Biology. 26: 129-136. PMID 30723327 DOI: 10.1038/S41594-018-0181-Y  0.68
2019 Tillison EA, Pokhrel N, Antony E. Abstract 2570: Colonic adenocarcinoma-associated DNA-binding site mutations in Rad52 perturbs its ssDNA binding polarity and function in homologous recombination Cancer Research. DOI: 10.1158/1538-7445.Sabcs18-2570  0.581
2019 Mustafa G, Chuang C, Roy WA, Farhath MM, Pokhrel N, Ma Y, Nagasawa K, Antony E, Comstock MJ, Basu S, Balci H. Converting FRET Signal into Force Information using Short Looped DNA as Force Transducer Biophysical Journal. 116: 442a. DOI: 10.1016/J.Bpj.2018.11.2383  0.337
2018 Yates LA, Aramayo RJ, Pokhrel N, Caldwell CC, Kaplan JA, Perera RL, Spies M, Antony E, Zhang X. A structural and dynamic model for the assembly of Replication Protein A on single-stranded DNA. Nature Communications. 9: 5447. PMID 30575763 DOI: 10.1038/S41467-018-07883-7  0.657
2018 Mustafa G, Chuang CY, Roy WA, Farhath MM, Pokhrel N, Ma Y, Nagasawa K, Antony E, Comstock MJ, Basu S, Balci H. A force sensor that converts fluorescence signal into force measurement utilizing short looped DNA. Biosensors & Bioelectronics. 121: 34-40. PMID 30195120 DOI: 10.1016/J.Bios.2018.08.073  0.4
2018 Seefeldt LC, Hoffman BM, Peters JW, Raugei S, Beratan DN, Antony E, Dean DR. Energy Transduction in Nitrogenase. Accounts of Chemical Research. PMID 30095253 DOI: 10.1021/Acs.Accounts.8B00112  0.347
2018 Singh SP, Kukshal V, De Bona P, Antony E, Galletto R. The mitochondrial single-stranded DNA binding protein from S. cerevisiae, Rim1, does not form stable homo-tetramers and binds DNA as a dimer of dimers. Nucleic Acids Research. PMID 29931186 DOI: 10.1093/Nar/Gky530  0.678
2018 Antony E, Lohman TM. Dynamics of E. coli single stranded DNA binding (SSB) protein-DNA complexes. Seminars in Cell & Developmental Biology. PMID 29588158 DOI: 10.1016/J.Semcdb.2018.03.017  0.792
2017 Pokhrel N, Origanti S, Davenport EP, Gandhi D, Kaniecki K, Mehl RA, Greene EC, Dockendorff C, Antony E. Monitoring Replication Protein A (RPA) dynamics in homologous recombination through site-specific incorporation of non-canonical amino acids. Nucleic Acids Research. 45: 9413-9426. PMID 28934470 DOI: 10.1093/Nar/Gkx598  0.666
2016 Danyal K, Shaw S, Page TR, Duval S, Horitani M, Marts AR, Lukoyanov D, Dean DR, Raugei S, Hoffman BM, Seefeldt LC, Antony E. Negative cooperativity in the nitrogenase Fe protein electron delivery cycle. Proceedings of the National Academy of Sciences of the United States of America. 113: E5783-E5791. PMID 27698129 DOI: 10.1073/Pnas.1613089113  0.352
2016 Davenport EP, Harris DF, Origanti S, Antony E. Rad51 Nucleoprotein Filament Disassembly Captured Using Fluorescent Plasmodium falciparum SSB as a Reporter for Single-Stranded DNA. Plos One. 11: e0159242. PMID 27416037 DOI: 10.1371/Journal.Pone.0159242  0.675
2016 Yang ZY, Ledbetter R, Shaw S, Pence NK, Tokmina-Lukaszewska M, Eilers BJ, Guo Q, Pokhrel N, Cash VL, Dean DR, Antony E, Bothner B, Peters JW, Seefeldt LC. Evidence that the Pi Release Event is the Rate Limiting Step in the Nitrogenase Catalytic Cycle. Biochemistry. PMID 27295169 DOI: 10.1021/Acs.Biochem.6B00421  0.348
2016 Burgess JL, Jones HB, Kumar P, Toth RT, Russell Middaugh C, Antony E, Dickenson NE. Spa47 is an oligomerization-activated type three secretion system (T3SS) ATPase from Shigella flexneri. Protein Science : a Publication of the Protein Society. PMID 26947936 DOI: 10.1002/Pro.2917  0.316
2015 Kozlov AG, Weiland E, Mittal A, Waldman V, Antony E, Fazio N, Pappu RV, Lohman TM. Intrinsically disordered C-terminal tails of E. coli single-stranded DNA binding protein regulate cooperative binding to single-stranded DNA. Journal of Molecular Biology. 427: 763-74. PMID 25562210 DOI: 10.1016/J.Jmb.2014.12.020  0.614
2014 Lytle AK, Origanti SS, Qiu Y, VonGermeten J, Myong S, Antony E. Corrigendum to "Context-Dependent Remodeling of Rad51-DNA Complexes by Srs2 Is Mediated by a Specific Protein-Protein Interaction" [J. Mol. Biol.426 (2014) 1883-1897]. Journal of Molecular Biology. 426: 3195-3196. PMID 28889835 DOI: 10.1016/J.Jmb.2014.07.011  0.517
2014 Lytle AK, Origanti SS, Qiu Y, VonGermeten J, Myong S, Antony E. Context-dependent remodeling of Rad51-DNA complexes by Srs2 is mediated by a specific protein-protein interaction. Journal of Molecular Biology. 426: 1883-97. PMID 24576606 DOI: 10.1016/J.Jmb.2014.02.014  0.597
2013 Duval S, Danyal K, Shaw S, Lytle AK, Dean DR, Hoffman BM, Antony E, Seefeldt LC. Electron transfer precedes ATP hydrolysis during nitrogenase catalysis. Proceedings of the National Academy of Sciences of the United States of America. 110: 16414-9. PMID 24062462 DOI: 10.1073/Pnas.1311218110  0.385
2013 Antony E, Weiland E, Yuan Q, Manhart CM, Nguyen B, Kozlov AG, McHenry CS, Lohman TM. Multiple C-terminal tails within a single E. coli SSB homotetramer coordinate DNA replication and repair. Journal of Molecular Biology. 425: 4802-19. PMID 24021816 DOI: 10.1016/J.Jmb.2013.08.021  0.809
2013 Qiu Y, Antony E, Doganay S, Koh HR, Lohman TM, Myong S. Srs2 prevents Rad51 filament formation by repetitive motion on DNA. Nature Communications. 4: 2281. PMID 23939144 DOI: 10.1038/Ncomms3281  0.706
2012 Antony E, Kozlov AG, Nguyen B, Lohman TM. Plasmodium falciparum SSB tetramer binds single-stranded DNA only in a fully wrapped mode. Journal of Molecular Biology. 420: 284-95. PMID 22543238 DOI: 10.1016/J.Jmb.2012.04.022  0.835
2012 Antony E, Weiland EA, Korolev S, Lohman TM. Plasmodium falciparum SSB tetramer wraps single-stranded DNA with similar topology but opposite polarity to E. coli SSB. Journal of Molecular Biology. 420: 269-83. PMID 22543099 DOI: 10.1016/J.Jmb.2012.04.021  0.764
2011 Niedziela-Majka A, Maluf NK, Antony E, Lohman TM. Self-assembly of Escherichia coli MutL and its complexes with DNA. Biochemistry. 50: 7868-80. PMID 21793594 DOI: 10.1021/Bi200753B  0.772
2009 Antony E, Tomko EJ, Xiao Q, Krejci L, Lohman TM, Ellenberger T. Srs2 disassembles Rad51 filaments by a protein-protein interaction triggering ATP turnover and dissociation of Rad51 from DNA. Molecular Cell. 35: 105-15. PMID 19595720 DOI: 10.1016/J.Molcel.2009.05.026  0.799
2006 Antony E, Khubchandani S, Chen S, Hingorani MM. Contribution of Msh2 and Msh6 subunits to the asymmetric ATPase and DNA mismatch binding activities of Saccharomyces cerevisiae Msh2-Msh6 mismatch repair protein. Dna Repair. 5: 153-62. PMID 16214425 DOI: 10.1016/J.Dnarep.2005.08.016  0.798
2005 Zito CR, Antony E, Hunt JF, Oliver DB, Hingorani MM. Role of a conserved glutamate residue in the Escherichia coli SecA ATPase mechanism Journal of Biological Chemistry. 280: 14611-14619. PMID 15710614 DOI: 10.1074/Jbc.M414224200  0.642
2004 Antony E, Hingorani MM. Asymmetric ATP binding and hydrolysis activity of the Thermus aquaticus MutS dimer is key to modulation of its interactions with mismatched DNA. Biochemistry. 43: 13115-28. PMID 15476405 DOI: 10.1021/Bi049010T  0.785
2003 Finkelstein J, Antony E, Hingorani MM, O'Donnell M. Overproduction and analysis of eukaryotic multiprotein complexes in Escherichia coli using a dual-vector strategy. Analytical Biochemistry. 319: 78-87. PMID 12842110 DOI: 10.1016/S0003-2697(03)00273-2  0.683
2003 Antony E, Hingorani MM. Mismatch recognition-coupled stabilization of Msh2-Msh6 in an ATP-bound state at the initiation of DNA repair. Biochemistry. 42: 7682-93. PMID 12820877 DOI: 10.1021/Bi034602H  0.776
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