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Sai Ma - Publications

Affiliations: 
2017 Virginia Polytechnic Institute and State University, Blacksburg, VA, United States 
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25 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Zhang Q, Ma S, Liu Z, Zhu B, Zhou Z, Li G, Meana JJ, González-Maeso J, Lu C. Droplet-based bisulfite sequencing for high-throughput profiling of single-cell DNA methylomes. Nature Communications. 14: 4672. PMID 37537185 DOI: 10.1038/s41467-023-40411-w  0.546
2023 Zhang Q, Ma S, Liu Z, Zhu B, Zhou Z, Li G, Meana JJ, González-Maeso J, Lu C. Droplet-based bisulfite sequencing for high-throughput profiling of single-cell DNA methylomes. Biorxiv : the Preprint Server For Biology. PMID 37293095 DOI: 10.1101/2023.05.26.542421  0.546
2022 Hsieh YP, Naler LB, Ma S, Lu C. Cell-type-specific epigenomic variations associated with mutation in pre-cancer human breast tissues. Nar Genomics and Bioinformatics. 4: lqac006. PMID 35118379 DOI: 10.1093/nargab/lqac006  0.758
2021 Del Priore I, Ma S, Strecker J, Jacks T, LaFave LM, Buenrostro JD. Protocol for single-cell ATAC sequencing using combinatorial indexing in mouse lung adenocarcinoma. Star Protocols. 2: 100583. PMID 34142101 DOI: 10.1016/j.xpro.2021.100583  0.324
2020 LaFave LM, Kartha VK, Ma S, Meli K, Del Priore I, Lareau C, Naranjo S, Westcott PMK, Duarte FM, Sankar V, Chiang Z, Brack A, Law T, Hauck H, Okimoto A, et al. Epigenomic State Transitions Characterize Tumor Progression in Mouse Lung Adenocarcinoma. Cancer Cell. PMID 32707078 DOI: 10.1016/J.Ccell.2020.06.006  0.301
2020 Lareau CA, Ma S, Duarte FM, Buenrostro JD. Inference and effects of barcode multiplets in droplet-based single-cell assays. Nature Communications. 11: 866. PMID 32054859 DOI: 10.1038/S41467-020-14667-5  0.444
2020 Zhang B, Ma S, Rachmin I, He M, Baral P, Choi S, Gonçalves WA, Shwartz Y, Fast EM, Su Y, Zon LI, Regev A, Buenrostro JD, Cunha TM, Chiu IM, et al. Hyperactivation of sympathetic nerves drives depletion of melanocyte stem cells. Nature. PMID 31969699 DOI: 10.1038/S41586-020-1935-3  0.305
2020 LaFave LM, Kartha V, Ma S, Meli K, Priore ID, Lareau C, Sanker V, Naranjo S, Westcott P, Chiang Z, Brack A, Law T, Regev A, Buenrostro JD, Jacks T. Abstract PR08: Leveraging single-cell epigenomics to uncover regulatory programs in lung adenocarcinoma Cancer Research. 80. DOI: 10.1158/1538-7445.Camodels2020-Pr08  0.336
2019 Xu H, Ding J, Porter CBM, Wallrapp A, Tabaka M, Ma S, Fu S, Guo X, Riesenfeld SJ, Su C, Dionne D, Nguyen LT, Lefkovith A, Ashenberg O, Burkett PR, et al. Transcriptional Atlas of Intestinal Immune Cells Reveals that Neuropeptide α-CGRP Modulates Group 2 Innate Lymphoid Cell Responses. Immunity. 51: 696-708.e9. PMID 31618654 DOI: 10.1016/J.Immuni.2019.09.004  0.332
2019 Sarma M, Lee J, Ma S, Li S, Lu C. A diffusion-based microfluidic device for single-cell RNA-seq. Lab On a Chip. PMID 30815639 DOI: 10.1039/C8Lc00967H  0.684
2018 Ma S, de la Fuente Revenga M, Sun Z, Sun C, Murphy TW, Xie H, González-Maeso J, Lu C. Cell-type-specific brain methylomes profiled via ultralow-input microfluidics. Nature Biomedical Engineering. 2: 183-194. PMID 29963329 DOI: 10.1038/S41551-018-0204-3  0.78
2018 Murphy TW, Hsieh YP, Ma S, Zhu Y, Lu C. Microfluidic low-Input fluidized-bed enabled ChIP-seq device for automated and parallel analysis of histone modifications. Analytical Chemistry. PMID 29842781 DOI: 10.1021/Acs.Analchem.8B01541  0.729
2018 Ma S, Hsieh YP, Ma J, Lu C. Low-input and multiplexed microfluidic assay reveals epigenomic variation across cerebellum and prefrontal cortex. Science Advances. 4: eaar8187. PMID 29675472 DOI: 10.1126/Sciadv.Aar8187  0.768
2017 Murphy TW, Zhang Q, Naler LB, Ma S, Lu C. Recent advances in the use of microfluidic technologies for single cell analysis. The Analyst. PMID 29170786 DOI: 10.1039/C7An01346A  0.774
2017 Ma S, Murphy TW, Lu C. Microfluidics for genome-wide studies involving next generation sequencing. Biomicrofluidics. 11: 021501. PMID 28396707 DOI: 10.1063/1.4978426  0.758
2017 Sun C, Hsieh YP, Ma S, Geng S, Cao Z, Li L, Lu C. Immunomagnetic separation of tumor initiating cells by screening two surface markers. Scientific Reports. 7: 40632. PMID 28074882 DOI: 10.1038/Srep40632  0.727
2016 Sun C, Hassanisaber H, Yu R, Ma S, Verbridge SS, Lu C. Paramagnetic Structures within a Microfluidic Channel for Enhanced Immunomagnetic Isolation and Surface Patterning of Cells. Scientific Reports. 6: 29407. PMID 27388549 DOI: 10.1038/Srep29407  0.581
2016 Ma S, Bryson BD, Sun C, Fortune SM, Lu C. RNA extraction from a mycobacterium under ultrahigh electric field intensity in a microfluidic device. Analytical Chemistry. PMID 27081872 DOI: 10.1021/Acs.Analchem.6B00381  0.617
2015 Crow J, Achenie LEK, Lu C, Ma S, Loufakis DN, Cao Z, Chang Y. Optimal Design of Microfluidic Platforms for Diffusion-Based PCR for "One-Pot" Analysis of Cells Computer Aided Chemical Engineering. 37: 1199-1204. DOI: 10.1016/B978-0-444-63577-8.50045-0  0.737
2014 Loufakis DN, Cao Z, Ma S, Mittelman D, Lu C. Focusing of mammalian cells under an ultrahigh pH gradient created by unidirectional electropulsation in a confined microchamber†Electronic supplementary information (ESI) available: Figures S1-S5 and videos S1-S2. See DOI: 10.1039/c4sc00319eClick here for additional data file.Click here for additional data file.Click here for additional data file. Chemical Science (Royal Society of Chemistry : 2010). 5: 3331-3337. PMID 25750708 DOI: 10.1039/C4Sc00319E  0.736
2014 Ma S, Schroeder B, Sun C, Loufakis DN, Cao Z, Sriranganathan N, Lu C. Electroporation-based delivery of cell-penetrating peptide conjugates of peptide nucleic acids for antisense inhibition of intracellular bacteria. Integrative Biology : Quantitative Biosciences From Nano to Macro. 6: 973-8. PMID 25160797 DOI: 10.1039/C4Ib00172A  0.718
2014 Sun C, Ouyang M, Cao Z, Ma S, Alqublan H, Sriranganathan N, Wang Y, Lu C. Electroporation-delivered fluorescent protein biosensors for probing molecular activities in cells without genetic encoding. Chemical Communications (Cambridge, England). 50: 11536-9. PMID 25133322 DOI: 10.1039/C4Cc04730C  0.714
2014 Ma S, Loufakis DN, Cao Z, Chang Y, Achenie LE, Lu C. Diffusion-based microfluidic PCR for "one-pot" analysis of cells. Lab On a Chip. 14: 2905-9. PMID 24921711 DOI: 10.1039/C4Lc00498A  0.752
2014 Ma S, Tang Y, Liu J, Wu J. Visible paper chip immunoassay for rapid determination of bacteria in water distribution system. Talanta. 120: 135-40. PMID 24468352 DOI: 10.1016/J.Talanta.2013.12.007  0.311
2012 Tan J, Zhao WJ, Yu JK, Ma S, Sailor MJ, Wu JM. Capture, enrichment, and mass spectrometric detection of low-molecular-weight biomarkers with nanoporous silicon microparticles. Advanced Healthcare Materials. 1: 742-50. PMID 23184826 DOI: 10.1002/Adhm.201200161  0.304
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