Hookeun Lee - Publications

Affiliations: 
Gachon University 
Area:
LC-MS/MS

55 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Duong VA, Nam O, Jin E, Park JM, Lee H. Discovery of Post-Translational Modifications in . Molecules (Basel, Switzerland). 26. PMID 33918234 DOI: 10.3390/molecules26072027  0.348
2021 Mok J, Joo M, Duong V, Cho S, Park J, Eom Y, Song T, Lim H, Lee H. Proteomic and Metabolomic Analyses of Maggots in Porcine Corpses for Post-Mortem Interval Estimation Applied Sciences. 11: 7885. DOI: 10.3390/app11177885  0.321
2020 Yun G, Park JM, Duong VA, Mok JH, Jeon J, Nam O, Lee J, Jin E, Lee H. Proteomic Profiling of Using a Three-Dimensional Separation Method Combined with Tandem Mass Spectrometry. Molecules (Basel, Switzerland). 25. PMID 32630776 DOI: 10.3390/Molecules25133028  0.433
2020 Duong VA, Park JM, Lee H. Review of Three-Dimensional Liquid Chromatography Platforms for Bottom-Up Proteomics. International Journal of Molecular Sciences. 21. PMID 32102244 DOI: 10.3390/Ijms21041524  0.398
2020 Noh Y, Lee H, Hong S, Lee H, Cho B, Lee C, Choi H. Comparative Primary Metabolic and Lipidomic Profiling of Freshwater and Marine Synechocystis Strains Using by GC-MS and NanoESI-MS Analyses Biotechnology and Bioprocess Engineering. 25: 308-319. DOI: 10.1007/S12257-019-0432-8  0.331
2020 Choi YR, Kim KS, Bandu R, Kim H, Lee JE, Shin B, Cho YJ, Park JM, Lee H, Kim KP. Liquid Chromatography/Electrospray Ionization Tandem Mass Spectrometry‐based Structural Analysis of Deacylated Lipooligosaccharides From Escherichia coli Bulletin of the Korean Chemical Society. 41: 454-459. DOI: 10.1002/Bkcs.11993  0.329
2019 Kim MA, Markkandan K, Han NY, Park JM, Lee JS, Lee H, Sohn YC. Neural Ganglia Transcriptome and Peptidome Associated with Sexual Maturation in Female Pacific Abalone (). Genes. 10. PMID 30987054 DOI: 10.3390/Genes10040268  0.319
2019 Joo M, Park J, Duong V, Kwon D, Jeon J, Han M, Cho B, Choi H, Lee C, Kang H, Lee H. An automated high-throughput sample preparation method using double-filtration for serum metabolite LC-MS analysis Analytical Methods. 11: 4060-4065. DOI: 10.1039/C9Ay01137D  0.349
2018 Han NY, Hong JY, Park JM, Shin C, Lee S, Lee H, Yun JH. Label-free quantitative proteomic analysis of human periodontal ligament stem cells by high-resolution mass spectrometry. Journal of Periodontal Research. PMID 30298515 DOI: 10.1111/Jre.12604  0.334
2018 Jeon J, Yang J, Park JM, Han NY, Lee YB, Lee H. Development of an automated high-throughput sample preparation protocol for LC-MS/MS analysis of glycated peptides. Journal of Chromatography. B, Analytical Technologies in the Biomedical and Life Sciences. 1092: 88-94. PMID 29885514 DOI: 10.1016/J.Jchromb.2018.05.036  0.406
2016 Jang I, Lee SY, Hwangbo S, Kang D, Lee H, Kim HI, Moon B, Oh HB. TEMPO-Assisted Free Radical-Initiated Peptide Sequencing Mass Spectrometry (FRIPS MS) in Q-TOF and Orbitrap Mass Spectrometers: Single-Step Peptide Backbone Dissociations in Positive Ion Mode. Journal of the American Society For Mass Spectrometry. PMID 27686973 DOI: 10.1007/S13361-016-1508-8  0.341
2016 Arul A, Han N, Jang Y, Kim H, Kim H, Lee H. Effects of Heat Shock Treatment on Enzymatic Proteolysis for LC-MS/MS Quantitative Proteome Analysis Mass Spectrometry Letters. 7: 1-11. DOI: 10.5478/Msl.2016.7.1.1  0.394
2016 Arul AB, Park JM, Lee H, Baek JH, Jeon J, Ji E, Oh JW, Kim KP. An automated high-throughput sample preparation protocol for LC-MS/MS analysis of glycopeptides Current Proteomics. 13: 55-60. DOI: 10.2174/1570164613666160413125317  0.378
2016 Arul AB, Park JM, Lee H, Han NY, Jeon J. Use of filter-aided capture and elution protocol for concurrent preparation of N-glycan and O-glycopeptides for LC-MS/MS analysis Current Proteomics. 13: 48-54. DOI: 10.2174/1570164613666160413125041  0.368
2015 Park JM, Park JH, Mun DG, Bae J, Jung JH, Back S, Lee H, Kim H, Jung HJ, Kim HK, Lee H, Kim KP, Hwang D, Lee SW. Integrated analysis of global proteome, phosphoproteome, and glycoproteome enables complementary interpretation of disease-related protein networks. Scientific Reports. 5: 18189. PMID 26657352 DOI: 10.1038/Srep18189  0.372
2015 Shin H, Hong SJ, Kim H, Yoo C, Lee H, Choi HK, Lee CG, Cho BK. Elucidation of the growth delimitation of Dunaliella tertiolecta under nitrogen stress by integrating transcriptome and peptidome analysis. Bioresource Technology. 194: 57-66. PMID 26185926 DOI: 10.1016/J.Biortech.2015.07.002  0.304
2015 Moon E, Park HM, Lee CH, Do SG, Park JM, Han NY, Do MH, Lee JH, Lee H, Kim SY. Dihydrolipoyl dehydrogenase as a potential UVB target in skin epidermis; using an integrated approach of label-free quantitative proteomics and targeted metabolite analysis. Journal of Proteomics. 117: 70-85. PMID 25576851 DOI: 10.1016/J.Jprot.2014.12.016  0.358
2015 Arul AB, Byambadorj M, Han NY, Park JM, Lee H. Development of an automated, high-throughput sample preparation protocol for proteomics analysis Bulletin of the Korean Chemical Society. 36: 1791-1798. DOI: 10.1002/Bkcs.10338  0.401
2014 Park JM, Han NY, Kim H, Hwang I, Kim JB, Hahm KB, Lee SW, Lee H. Proteome analysis of mouse adipose tissue and colon tissue using a novel integrated data processing pipeline Mass Spectrometry Letters. 5: 16-23. DOI: 10.5478/Msl.2014.5.1.16  0.436
2014 Hong S, Kim H, Jang JH, Cho B, Choi H, Lee H, Lee C. Proteomic analysis of Synechocystis sp. PCC6803 responses to low-temperature and high light conditions Biotechnology and Bioprocess Engineering. 19: 629-640. DOI: 10.1007/S12257-013-0563-2  0.351
2013 Tran T, Park JM, Kim OH, Kim B, Choi DY, Lee J, Kim K, Oh BC, Lee H. Combined phospho- and glycoproteome enrichment in nephrocalcinosis tissues of phytate-fed rats. Rapid Communications in Mass Spectrometry : Rcm. 27: 2767-76. PMID 24214862 DOI: 10.1002/Rcm.6742  0.385
2013 Arul A, Han N, Lee H. An Automated High Throughput Proteolysis and Desalting Platform for Quantitative Proteomic Analysis Mass Spectrometry Letters. 4: 25-29. DOI: 10.5478/Msl.2013.4.2.25  0.417
2012 Han NY, Kim EH, Choi J, Lee H, Hahm KB. Quantitative proteomic approaches in biomarker discovery of inflammatory bowel disease. Journal of Digestive Diseases. 13: 497-503. PMID 22988922 DOI: 10.1111/J.1751-2980.2012.00625.X  0.426
2012 Waldemarson S, Krogh M, Alaiya A, Kirik U, Schedvins K, Auer G, Hansson KM, Ossola R, Aebersold R, Lee H, Malmström J, James P. Protein expression changes in ovarian cancer during the transition from benign to malignant. Journal of Proteome Research. 11: 2876-89. PMID 22471520 DOI: 10.1021/Pr201258Q  0.343
2012 Tran TH, Hwang I, Park J, Kim JB, Lee H. An Application of Electrostatic Repulsion Hydrophilic Interaction Chromatography in Phospho- and Glycoproteome Profiling of Epicardial Adipose Tissue in Obesity Mouse Mass Spectrometry Letters. 3: 39-42. DOI: 10.5478/Msl.2012.3.2.39  0.389
2011 Hyung SW, Kim MS, Mun DG, Lee H, Lee SW. The effect and potential of using a temperature controlled separation column with ultra-high pressure microcapillary liquid chromatography/tandem mass spectrometry on proteomic analysis. The Analyst. 136: 2100-5. PMID 21431206 DOI: 10.1039/C0An00724B  0.416
2010 Jung HJ, Purvine SO, Kim H, Petyuk VA, Hyung SW, Monroe ME, Mun DG, Kim KC, Park JM, Kim SJ, Tolic N, Slysz GW, Moore RJ, Zhao R, Adkins JN, ... ... Lee H, et al. Integrated post-experiment monoisotopic mass refinement: an integrated approach to accurately assign monoisotopic precursor masses to tandem mass spectrometric data. Analytical Chemistry. 82: 8510-8. PMID 20863060 DOI: 10.1021/Ac101388B  0.395
2009 Gupta MK, Jung JW, Uhm SJ, Lee H, Lee HT, Kim KP. Combining selected reaction monitoring with discovery proteomics in limited biological samples. Proteomics. 9: 4834-6. PMID 19810035 DOI: 10.1002/Pmic.200900310  0.425
2009 Urwyler S, Nyfeler Y, Ragaz C, Lee H, Mueller LN, Aebersold R, Hilbi H. Proteome analysis of Legionella vacuoles purified by magnetic immunoseparation reveals secretory and endosomal GTPases. Traffic (Copenhagen, Denmark). 10: 76-87. PMID 18980612 DOI: 10.1111/J.1600-0854.2008.00851.X  0.332
2008 Hwang D, Zhang N, Lee H, Yi E, Zhang H, Lee IY, Hood L, Aebersold R. MS-BID: a Java package for label-free LC-MS-based comparative proteomic analysis. Bioinformatics (Oxford, England). 24: 2641-2. PMID 18805798 DOI: 10.1093/Bioinformatics/Btn491  0.396
2008 Pflieger D, Jünger MA, Müller M, Rinner O, Lee H, Gehrig PM, Gstaiger M, Aebersold R. Quantitative proteomic analysis of protein complexes: concurrent identification of interactors and their state of phosphorylation. Molecular & Cellular Proteomics : McP. 7: 326-46. PMID 17956857 DOI: 10.1074/Mcp.M700282-Mcp200  0.373
2008 Klimek J, Eddes JS, Hohmann L, Jackson J, Peterson A, Letarte S, Gafken PR, Katz JE, Mallick P, Lee H, Schmidt A, Ossola R, Eng JK, Aebersold R, Martin DB. The standard protein mix database: a diverse data set to assist in the production of improved Peptide and protein identification software tools. Journal of Proteome Research. 7: 96-103. PMID 17711323 DOI: 10.1021/Pr070244J  0.422
2007 Malmström J, Lee H, Aebersold R. Advances in proteomic workflows for systems biology. Current Opinion in Biotechnology. 18: 378-84. PMID 17698335 DOI: 10.1016/J.Copbio.2007.07.005  0.406
2007 Prakash A, Piening B, Whiteaker J, Zhang H, Shaffer SA, Martin D, Hohmann L, Cooke K, Olson JM, Hansen S, Flory MR, Lee H, Watts J, Goodlett DR, Aebersold R, et al. Assessing bias in experiment design for large scale mass spectrometry-based quantitative proteomics. Molecular & Cellular Proteomics : McP. 6: 1741-8. PMID 17617667 DOI: 10.1074/Mcp.M600470-Mcp200  0.388
2007 Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, et al. A high-quality catalog of the Drosophila melanogaster proteome. Nature Biotechnology. 25: 576-83. PMID 17450130 DOI: 10.1038/Nbt1300  0.37
2007 Mallick P, Schirle M, Chen SS, Flory MR, Lee H, Martin D, Ranish J, Raught B, Schmitt R, Werner T, Kuster B, Aebersold R. Computational prediction of proteotypic peptides for quantitative proteomics. Nature Biotechnology. 25: 125-31. PMID 17195840 DOI: 10.1038/Nbt1275  0.389
2006 Flory MR, Lee H, Bonneau R, Mallick P, Serikawa K, Morris DR, Aebersold R. Quantitative proteomic analysis of the budding yeast cell cycle using acid-cleavable isotope-coded affinity tag reagents. Proteomics. 6: 6146-57. PMID 17133367 DOI: 10.1002/Pmic.200600159  0.404
2006 King NL, Deutsch EW, Ranish JA, Nesvizhskii AI, Eddes JS, Mallick P, Eng J, Desiere F, Flory M, Martin DB, Kim B, Lee H, Raught B, Aebersold R. Analysis of the Saccharomyces cerevisiae proteome with PeptideAtlas. Genome Biology. 7: R106. PMID 17101051 DOI: 10.1186/Gb-2006-7-11-R106  0.368
2006 Malmström J, Lee H, Nesvizhskii AI, Shteynberg D, Mohanty S, Brunner E, Ye M, Weber G, Eckerskorn C, Aebersold R. Optimized peptide separation and identification for mass spectrometry based proteomics via free-flow electrophoresis. Journal of Proteome Research. 5: 2241-9. PMID 16944936 DOI: 10.1021/Pr0600632  0.407
2006 Gan RR, Yi EC, Chiu Y, Lee H, Kao YC, Wu TH, Aebersold R, Goodlett DR, Ng WV. Proteome analysis of Halobacterium sp. NRC-1 facilitated by the biomodule analysis tool BMSorter. Molecular & Cellular Proteomics : McP. 5: 987-97. PMID 16497792 DOI: 10.1074/Mcp.M500367-Mcp200  0.366
2006 Prakash A, Mallick P, Whiteaker J, Zhang H, Paulovich A, Flory M, Lee H, Aebersold R, Schwikowski B. Signal maps for mass spectrometry-based comparative proteomics. Molecular & Cellular Proteomics : McP. 5: 423-32. PMID 16269421 DOI: 10.1074/Mcp.M500133-Mcp200  0.372
2005 Deutsch EW, Eng JK, Zhang H, King NL, Nesvizhskii AI, Lin B, Lee H, Yi EC, Ossola R, Aebersold R. Human Plasma PeptideAtlas. Proteomics. 5: 3497-500. PMID 16052627 DOI: 10.1002/Pmic.200500160  0.366
2005 Yi EC, Li XJ, Cooke K, Lee H, Raught B, Page A, Aneliunas V, Hieter P, Goodlett DR, Aebersold R. Increased quantitative proteome coverage with (13)C/(12)C-based, acid-cleavable isotope-coded affinity tag reagent and modified data acquisition scheme. Proteomics. 5: 380-7. PMID 15648049 DOI: 10.1002/Pmic.200400970  0.419
2005 Desiere F, Deutsch EW, Nesvizhskii AI, Mallick P, King NL, Eng JK, Aderem A, Boyle R, Brunner E, Donohoe S, Fausto N, Hafen E, Hood L, Katze MG, Kennedy KA, ... ... Lee H, et al. Integration with the human genome of peptide sequences obtained by high-throughput mass spectrometry. Genome Biology. 6: R9. PMID 15642101 DOI: 10.1186/Gb-2004-6-1-R9  0.402
2004 Kao WC, Chen YR, Yi EC, Lee H, Tian Q, Wu KM, Tsai SF, Yu SS, Chen YJ, Aebersold R, Chan SI. Quantitative proteomic analysis of metabolic regulation by copper ions in Methylococcus capsulatus (Bath). The Journal of Biological Chemistry. 279: 51554-60. PMID 15385566 DOI: 10.1074/Jbc.M408013200  0.322
2004 Yan W, Lee H, Yi EC, Reiss D, Shannon P, Kwieciszewski BK, Coito C, Li XJ, Keller A, Eng J, Galitski T, Goodlett DR, Aebersold R, Katze MG. System-based proteomic analysis of the interferon response in human liver cells. Genome Biology. 5: R54. PMID 15287976 DOI: 10.1186/Gb-2004-5-8-R54  0.32
2004 Yan W, Lee H, Deutsch EW, Lazaro CA, Tang W, Chen E, Fausto N, Katze MG, Aebersold R. A dataset of human liver proteins identified by protein profiling via isotope-coded affinity tag (ICAT) and tandem mass spectrometry. Molecular & Cellular Proteomics : McP. 3: 1039-41. PMID 15269248 DOI: 10.1074/Mcp.D400001-Mcp200  0.423
2004 Li XJ, Pedrioli PG, Eng J, Martin D, Yi EC, Lee H, Aebersold R. A tool to visualize and evaluate data obtained by liquid chromatography-electrospray ionization-mass spectrometry. Analytical Chemistry. 76: 3856-60. PMID 15228367 DOI: 10.1021/Ac035375S  0.406
2004 Lee H, Yi EC, Wen B, Reily TP, Pohl L, Nelson S, Aebersold R, Goodlett DR. Optimization of reversed-phase microcapillary liquid chromatography for quantitative proteomics. Journal of Chromatography. B, Analytical Technologies in the Biomedical and Life Sciences. 803: 101-10. PMID 15026003 DOI: 10.1016/J.Jchromb.2003.09.005  0.435
2004 MacKay VL, Li X, Flory MR, Turcott E, Law GL, Serikawa KA, Xu XL, Lee H, Goodlett DR, Aebersold R, Zhao LP, Morris DR. Gene expression analyzed by high-resolution state array analysis and quantitative proteomics: response of yeast to mating pheromone. Molecular & Cellular Proteomics : McP. 3: 478-89. PMID 14766929 DOI: 10.1074/Mcp.M300129-Mcp200  0.346
2003 Yi EC, Lee H, Aebersold R, Goodlett DR. A microcapillary trap cartridge-microcapillary high-performance liquid chromatography electrospray ionization emitter device capable of peptide tandem mass spectrometry at the attomole level on an ion trap mass spectrometer with automated routine operation. Rapid Communications in Mass Spectrometry : Rcm. 17: 2093-8. PMID 12955739 DOI: 10.1002/Rcm.1150  0.409
2003 Lee H, Williams SK, Wahl KL, Valentine NB. Analysis of whole bacterial cells by flow field-flow fractionation and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Analytical Chemistry. 75: 2746-52. PMID 12948145 DOI: 10.1021/Ac020698U  0.344
2003 Griffin TJ, Lock CM, Li XJ, Patel A, Chervetsova I, Lee H, Wright ME, Ranish JA, Chen SS, Aebersold R. Abundance ratio-dependent proteomic analysis by mass spectrometry. Analytical Chemistry. 75: 867-74. PMID 12622378 DOI: 10.1021/Ac026127J  0.436
2002 Yi EC, Marelli M, Lee H, Purvine SO, Aebersold R, Aitchison JD, Goodlett DR. Approaching complete peroxisome characterization by gas-phase fractionation. Electrophoresis. 23: 3205-16. PMID 12298092 DOI: 10.1002/1522-2683(200209)23:18<3205::Aid-Elps3205>3.0.Co;2-Y  0.374
2002 Lee H, Griffin TJ, Gygi SP, Rist B, Aebersold R. Development of a multiplexed microcapillary liquid chromatography system for high-throughput proteome analysis. Analytical Chemistry. 74: 4353-60. PMID 12236342 DOI: 10.1021/Ac025757I  0.43
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