Elizabeth Eli Holmes - Publications

Affiliations: 
Northwest Fisheries Science Center (NOAA Fisheries), Seattle, WA, United States 

30 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Pendleton DE, Holmes EE, Redfern J, Zhang J. Using modelled prey to predict the distribution of a highly mobile marine mammal Diversity and Distributions. DOI: 10.1111/Ddi.13149  0.321
2018 Ward EJ, Oken KL, Rose KA, Sable S, Watkins K, Holmes EE, Scheuerell MD. Applying spatiotemporal models to monitoring data to quantify fish population responses to the Deepwater Horizon oil spill in the Gulf of Mexico. Environmental Monitoring and Assessment. 190: 530. PMID 30121848 DOI: 10.1007/S10661-018-6912-Z  0.383
2017 Tolimieri N, Holmes EE, Williams GD, Pacunski R, Lowry D. Population assessment using multivariate time-series analysis: A case study of rockfishes in Puget Sound. Ecology and Evolution. 7: 2846-2860. PMID 28428874 DOI: 10.1002/Ece3.2901  0.479
2015 See KE, Holmes EE. Reducing bias and improving precision in species extinction forecasts. Ecological Applications : a Publication of the Ecological Society of America. 25: 1157-65. PMID 26465049 DOI: 10.1890/14-2003.1  0.459
2015 Ruhí A, Holmes EE, Rinne JN, Sabo JL. Anomalous droughts, not invasion, decrease persistence of native fishes in a desert river. Global Change Biology. 21: 1482-96. PMID 25430731 DOI: 10.1111/Gcb.12780  0.396
2015 Keith D, Akçakaya HR, Butchart SHM, Collen B, Dulvy NK, Holmes EE, Hutchings JA, Keinath D, Schwartz MK, Shelton AO, Waples RS. Temporal correlations in population trends: Conservation implications from time-series analysis of diverse animal taxa Biological Conservation. 192: 247-257. DOI: 10.1016/J.Biocon.2015.09.021  0.494
2014 Francis TB, Wolkovich EM, Scheuerell MD, Katz SL, Holmes EE, Hampton SE. Shifting regimes and changing interactions in the Lake Washington, U.S.A., plankton community from 1962-1994. Plos One. 9: e110363. PMID 25338087 DOI: 10.1371/Journal.Pone.0110363  0.34
2013 Hampton SE, Holmes EE, Scheef LP, Scheuerell MD, Katz SL, Pendleton DE, Ward EJ. Quantifying effects of abiotic and biotic drivers on community dynamics with multivariate autoregressive (MAR) models. Ecology. 94: 2663-9. PMID 24597213 DOI: 10.1890/13-0996.1  0.388
2012 Scheef LP, Pendleton DE, Hampton SE, Katz SL, Holmes EE, Scheuerell MD, Johns DG. Assessing marine plankton community structure from long-term monitoring data with multivariate autoregressive (MAR) models: A comparison of fixed station versus spatially distributed sampling data Limnology and Oceanography: Methods. 10: 54-64. DOI: 10.4319/Lom.2012.10.54  0.37
2012 Holmes EE, Ward EJ, Wills K. MARSS: Multivariate autoregressive state-space models for analyzing time-series data R Journal. 4: 11-19. DOI: 10.32614/Rj-2012-002  0.348
2011 Ward EJ, Semmens BX, Holmes EE, Balcomb Iii KC. Effects of multiple levels of social organization on survival and abundance. Conservation Biology : the Journal of the Society For Conservation Biology. 25: 350-5. PMID 21054527 DOI: 10.1111/J.1523-1739.2010.01600.X  0.576
2010 Ward EJ, Chirakkal H, González-Suárez M, Aurioles-Gamboa D, Holmes EE, Gerber L. Inferring spatial structure from time-series data: Using multivariate state-space models to detect metapopulation structure of california sea lions in the gulf of California, Mexico Journal of Applied Ecology. 47: 47-56. DOI: 10.1111/J.1365-2664.2009.01745.X  0.473
2010 Viscido SV, Holmes EE. Statistical modelling of communities and ecosystems using the LAMDA software tool Environmental Modelling and Software. 25: 1905-1908. DOI: 10.1016/J.Envsoft.2010.05.010  0.382
2009 Ward EJ, Parsons K, Holmes EE, Balcomb KC, Ford JK. The role of menopause and reproductive senescence in a long-lived social mammal. Frontiers in Zoology. 6: 4. PMID 19192288 DOI: 10.1186/1742-9994-6-4  0.34
2009 Ward EJ, Holmes EE, Balcomb KC. Quantifying the effects of prey abundance on killer whale reproduction Journal of Applied Ecology. 46: 632-640. DOI: 10.1111/J.1365-2664.2009.01647.X  0.486
2008 Ellner SP, Holmes EE. Commentary on Holmes et al. (2007): resolving the debate on when extinction risk is predictable. Ecology Letters. 11: E1-5. PMID 18638300 DOI: 10.1111/J.1461-0248.2008.01211.X  0.331
2007 Holmes EE, Fritz LW, York AE, Sweeney K. Age-structured modeling reveals long-term declines in the natality of western Steller sea lions. Ecological Applications : a Publication of the Ecological Society of America. 17: 2214-32. PMID 18213964 DOI: 10.1890/07-0508.1  0.474
2007 Holmes EE, Sabo JL, Viscido SV, Fagan WF. A statistical approach to quasi-extinction forecasting. Ecology Letters. 10: 1182-98. PMID 17803676 DOI: 10.1111/J.1461-0248.2007.01105.X  0.514
2007 Hauser DDW, Logsdon MG, Holmes EE, Vanblaricom GR, Osborne RW. Summer distribution patterns of southern resident killer whales Orcinus orca: Core areas and spatial segregation of social groups Marine Ecology Progress Series. 351: 301-310. DOI: 10.3354/Meps07117  0.443
2006 Fagan WF, Holmes EE. Quantifying the extinction vortex. Ecology Letters. 9: 51-60. PMID 16958868 DOI: 10.1111/J.1461-0248.2005.00845.X  0.443
2006 Levin PS, Holmes EE, Piner KR, Harvey CJ. Shifts in a Pacific ocean fish assemblage: the potential influence of exploitation. Conservation Biology : the Journal of the Society For Conservation Biology. 20: 1181-90. PMID 16922234 DOI: 10.1111/J.1523-1739.2006.00400.X  0.442
2004 Sabo JL, Holmes EE, Kareiva P. Efficacy of simple viability models in ecological risk assessment: Does density dependence matter? Ecology. 85: 328-341. DOI: 10.1890/03-0035  0.437
2004 Holmes EE. Beyond Theory To Application And Evaluation: Diffusion Approximations For Population Viability Analysis Ecological Applications. 14: 1272-1293. DOI: 10.1890/02-5088  0.442
2003 McClure MM, Holmes EE, Sanderson BL, Jordan CE. A Large-Scale, Multispecies Status Assessment: Anadromous Salmonids In The Columbia River Basin Ecological Applications. 13: 964-989. DOI: 10.1890/1051-0761(2003)13[964:Almsaa]2.0.Co;2  0.402
2003 Holmes EE, York AE. Using Age Structure to Detect Impacts on Threatened Populations: a Case Study with Steller Sea Lions Conservation Biology. 17: 1794-1806. DOI: 10.1111/J.1523-1739.2003.00191.X  0.458
2002 Holmes EE, Fagan WF. Validating population viability analysis for corrupted data sets Ecology. 83: 2379-2386. DOI: 10.1890/0012-9658(2002)083[2379:Vpvafc]2.0.Co;2  0.426
2001 Holmes EE. Estimating risks in declining populations with poor data Proceedings of the National Academy of Sciences of the United States of America. 98: 5072-5077. PMID 11309483 DOI: 10.1073/Pnas.081055898  0.452
1998 Holmes EE, Wilson HB. Running from trouble: long-distance dispersal and the competitive coexistence of inferior species. The American Naturalist. 151: 578-86. PMID 18811379 DOI: 10.1086/286143  0.359
1994 Holmes EE, Lewis MA, Banks JE, Veit RR. Partial Differential Equations in Ecology: Spatial Interactions and Population Dynamics Ecology. 75: 17-29. DOI: 10.2307/1939378  0.415
1993 Holmes EE. Are diffusion models too simple? A comparison with telegraph models of invasion American Naturalist. 142: 779-795. DOI: 10.1086/285572  0.367
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