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Quinn O. Snell - Publications

Affiliations: 
Computer Science Brigham Young University, Provo, UT, United States 
Area:
Computer Science, Bioinformatics Biology, Electronics and Electrical Engineering
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21 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Fujimoto MS, Suvorov A, Jensen NO, Clement MJ, Snell Q, Bybee SM. The OGCleaner: filtering false-positive homology clusters. Bioinformatics (Oxford, England). PMID 27614349 DOI: 10.1093/Bioinformatics/Btw571  0.33
2015 Bodily PM, Fujimoto M, Ortega C, Okuda N, Price JC, Clement MJ, Snell Q. Heterozygous genome assembly via binary classification of homologous sequence. Bmc Bioinformatics. 16: S5. PMID 25952609 DOI: 10.1186/1471-2105-16-S7-S5  0.413
2014 Fujimoto M, Bodily PM, Okuda N, Clement MJ, Snell Q. Effects of error-correction of heterozygous next-generation sequencing data. Bmc Bioinformatics. 15: S3. PMID 25077414 DOI: 10.1186/1471-2105-15-S7-S3  0.37
2013 Jensen JD, Jensen DM, Clement MJ, Snell QO. Probabilistic inference and ranking of gene regulatory pathways as a shortest-path problem. Bmc Bioinformatics. 14: S5. PMID 24266986 DOI: 10.1186/1471-2105-14-S13-S5  0.327
2013 Hong C, Clement NL, Clement S, Hammoud SS, Carrell DT, Cairns BR, Snell Q, Clement MJ, Johnson WE. Probabilistic alignment leads to improved accuracy and read coverage for bisulfite sequencing data. Bmc Bioinformatics. 14: 337. PMID 24261665 DOI: 10.1186/1471-2105-14-337  0.369
2013 Francis OE, Bendall M, Manimaran S, Hong C, Clement NL, Castro-Nallar E, Snell Q, Schaalje GB, Clement MJ, Crandall KA, Johnson WE. Pathoscope: species identification and strain attribution with unassembled sequencing data. Genome Research. 23: 1721-9. PMID 23843222 DOI: 10.1101/Gr.150151.112  0.393
2012 Sundberg K, Clement M, Snell Q, Ventura D, Whiting M, Crandall K. Phylogenetic search through partial tree mixing Bmc Bioinformatics. 13: S8. PMID 23320449 DOI: 10.1186/1471-2105-13-S13-S8  0.417
2011 Lloyd S, Snell QO. Accelerated large-scale multiple sequence alignment. Bmc Bioinformatics. 12: 466. PMID 22151470 DOI: 10.1186/1471-2105-12-466  0.456
2010 O'Connor T, Sundberg K, Carroll H, Clement M, Snell Q. Analysis of long branch extraction and long branch shortening. Bmc Genomics. 11: S14. PMID 21047381 DOI: 10.1186/1471-2164-11-S2-S14  0.31
2010 Sundberg K, Clement MJ, Snell Q. On the use of cartographic projections in visualizing phylo-genetic tree space Algorithms For Molecular Biology. 5: 26-26. PMID 20529355 DOI: 10.1186/1748-7188-5-26  0.354
2010 Clement NL, Snell Q, Clement MJ, Hollenhorst PC, Purwar J, Graves BJ, Cairns BR, Johnson WE. The GNUMAP algorithm: unbiased probabilistic mapping of oligonucleotides from next-generation sequencing. Bioinformatics (Oxford, England). 26: 38-45. PMID 19861355 DOI: 10.1093/Bioinformatics/Btp614  0.406
2009 Carroll H, Teichert AR, Krein J, Sundberg K, Snell Q, Clement M. An open source phylogenetic search and alignment package International Journal of Bioinformatics Research and Applications. 5: 349-364. PMID 19525205 DOI: 10.1504/Ijbra.2009.026424  0.381
2009 Lloyd S, Snell QO. Hardware accelerated sequence alignment with traceback International Journal of Reconfigurable Computing. 2009: 9. DOI: 10.1155/2009/762362  0.406
2008 Sundberg K, O'Connor T, Carroll H, Clement M, Snell Q. Parsimony accelerated maximum likelihood searches. International Journal of Computational Biology and Drug Design. 1: 74-87. PMID 20055002 DOI: 10.1504/Ijcbdd.2008.018711  0.351
2008 Mecham J, Clement M, Snell Q, Freestone T, Seppi K, Crandall K. Jumpstarting phylogenetic analysis. International Journal of Bioinformatics Research and Applications. 2: 19-35. PMID 18048151 DOI: 10.1504/Ijbra.2006.009191  0.463
2008 Lloyd S, Snell QO. Sequence alignment with traceback on reconfigurable hardware Proceedings - 2008 International Conference On Reconfigurable Computing and Fpgas, Reconfig 2008. 259-264. DOI: 10.1109/ReConFig.2008.30  0.341
2007 Carroll HD, Ridge PG, Clement MJ, Snell QO. Phylogenies scores for exhaustive searches and parsimony scores searches. International Journal of Bioinformatics Research and Applications. 3: 493-503. PMID 18048315 DOI: 10.1504/Ijbra.2007.015417  0.355
2007 Carroll H, Beckstead W, O'Connor T, Ebbert M, Clement M, Snell Q, McClellan D. DNA reference alignment benchmarks based on tertiary structure of encoded proteins. Bioinformatics (Oxford, England). 23: 2648-9. PMID 17686799 DOI: 10.1093/Bioinformatics/Btm389  0.367
2001 Turgeon A, Snell Q, Clement M. Object Placement Using Performance Surfaces Cluster Computing. 4: 263-273. DOI: 10.1023/A:1011406826169  0.344
1999 Snell Q, Judd G, Clement MJ. The DOGMA Approach to Parallel and Distributed Computing Scalable Computing: Practice and Experience. 2. DOI: 10.12694/Scpe.V2I2.125  0.346
1998 Judd G, Clement M, Snell Q. DOGMA: Distributed object group metacomputing architecture Concurrency Practice and Experience. 10: 977-983. DOI: 10.1002/(Sici)1096-9128(199809/11)10:11/13<977::Aid-Cpe400>3.0.Co;2-H  0.346
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