| Year |
Citation |
Score |
| 2024 |
Benhamou W, Blanquart F, Choisy M, Berngruber TW, Choquet R, Gandon S. Evolution of virulence in emerging epidemics: from theory to experimental evolution and back. Virus Evolution. 10: veae069. PMID 39568860 DOI: 10.1093/ve/veae069 |
0.58 |
|
| 2024 |
Jijón S, Czuppon P, Blanquart F, Débarre F. Using early detection data to estimate the date of emergence of an epidemic outbreak. Plos Computational Biology. 20: e1011934. PMID 38457460 DOI: 10.1371/journal.pcbi.1011934 |
0.66 |
|
| 2023 |
Czuppon P, Day T, Débarre F, Blanquart F. A stochastic analysis of the interplay between antibiotic dose, mode of action, and bacterial competition in the evolution of antibiotic resistance. Plos Computational Biology. 19: e1011364. PMID 37578976 DOI: 10.1371/journal.pcbi.1011364 |
0.622 |
|
| 2023 |
Blanquart F, Abad C, Ambroise J, Bernard M, Débarre F, Giannoli JM, Rey T, Vieillefond V. Temporal, age and geographical variation in vaccine efficacy against infection by the Delta and Omicron variants in the community in France, December 2021 to March 2022. International Journal of Infectious Diseases : Ijid : Official Publication of the International Society For Infectious Diseases. PMID 37182550 DOI: 10.1016/j.ijid.2023.04.410 |
0.623 |
|
| 2023 |
Gamblin J, Gandon S, Blanquart F, Lambert A. Bottlenecks can constrain and channel evolutionary paths. Genetics. PMID 36728496 DOI: 10.1093/genetics/iyad001 |
0.553 |
|
| 2022 |
Piel D, Bruto M, Labreuche Y, Blanquart F, Goudenège D, Barcia-Cruz R, Chenivesse S, Le Panse S, James A, Dubert J, Petton B, Lieberman E, Wegner KM, Hussain FA, Kauffman KM, et al. Phage-host coevolution in natural populations. Nature Microbiology. 7: 1075-1086. PMID 35760840 DOI: 10.1038/s41564-022-01157-1 |
0.564 |
|
| 2022 |
Blanquart F, Hozé N, Cowling BJ, Débarre F, Cauchemez S. Selection for infectivity profiles in slow and fast epidemics, and the rise of SARS-CoV-2 variants. Elife. 11. PMID 35587653 DOI: 10.7554/eLife.75791 |
0.652 |
|
| 2021 |
Czuppon P, Schertzer E, Blanquart F, Débarre F. The stochastic dynamics of early epidemics: probability of establishment, initial growth rate, and infection cluster size at first detection. Journal of the Royal Society, Interface. 18: 20210575. PMID 34784776 DOI: 10.1098/rsif.2021.0575 |
0.648 |
|
| 2021 |
Blanquart F, Abad C, Ambroise J, Bernard M, Cosentino G, Giannoli JM, Débarre F. Characterisation of vaccine breakthrough infections of SARS-CoV-2 Delta and Alpha variants and within-host viral load dynamics in the community, France, June to July 2021. Euro Surveillance : Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin. 26. PMID 34533119 DOI: 10.2807/1560-7917.ES.2021.26.37.2100824 |
0.638 |
|
| 2021 |
Cosentino G, Bernard M, Ambroise J, Giannoli JM, Guedj J, Débarre F, Blanquart F. SARS-CoV-2 viral dynamics in infections with Alpha and Beta variants of concern in the French community. The Journal of Infection. PMID 34329672 DOI: 10.1016/j.jinf.2021.07.031 |
0.638 |
|
| 2021 |
Czuppon P, Blanquart F, Uecker H, Débarre F. The Effect of Habitat Choice on Evolutionary Rescue in Subdivided Populations. The American Naturalist. 197: 625-643. PMID 33989144 DOI: 10.1086/714034 |
0.645 |
|
| 2021 |
Czuppon P, Débarre F, Gonçalves A, Tenaillon O, Perelson AS, Guedj J, Blanquart F. Success of prophylactic antiviral therapy for SARS-CoV-2: Predicted critical efficacies and impact of different drug-specific mechanisms of action. Plos Computational Biology. 17: e1008752. PMID 33647008 DOI: 10.1371/journal.pcbi.1008752 |
0.641 |
|
| 2019 |
Lehtinen S, Blanquart F, Lipsitch M, Fraser C. On the evolutionary ecology of multidrug resistance in bacteria. Plos Pathogens. 15: e1007763. PMID 31083687 DOI: 10.1371/Journal.Ppat.1007763 |
0.311 |
|
| 2019 |
Blanquart F. Evolutionary epidemiology models to predict the dynamics of antibiotic resistance. Evolutionary Applications. 12: 365-383. PMID 30828361 DOI: 10.1111/Eva.12753 |
0.363 |
|
| 2018 |
Blanquart F, Lehtinen S, Lipsitch M, Fraser C. The evolution of antibiotic resistance in a structured host population. Journal of the Royal Society, Interface. 15. PMID 29925579 DOI: 10.1098/Rsif.2018.0040 |
0.367 |
|
| 2017 |
Blanquart F, Wymant C, Cornelissen M, Gall A, Bakker M, Bezemer D, Hall M, Hillebregt M, Ong SH, Albert J, Bannert N, Fellay J, Fransen K, Gourlay AJ, Grabowski MK, et al. Viral genetic variation accounts for a third of variability in HIV-1 set-point viral load in Europe. Plos Biology. 15: e2001855. PMID 28604782 DOI: 10.1371/Journal.Pbio.2001855 |
0.377 |
|
| 2017 |
Blanquart F, Lehtinen S, Fraser C. An evolutionary model to predict the frequency of antibiotic resistance under seasonal antibiotic use, and an application to Streptococcus pneumoniae. Proceedings. Biological Sciences. 284. PMID 28566489 DOI: 10.1098/Rspb.2017.0679 |
0.324 |
|
| 2017 |
Lehtinen S, Blanquart F, Croucher NJ, Turner P, Lipsitch M, Fraser C. Evolution of antibiotic resistance is linked to any genetic mechanism affecting bacterial duration of carriage. Proceedings of the National Academy of Sciences of the United States of America. PMID 28096340 DOI: 10.1073/Pnas.1617849114 |
0.316 |
|
| 2016 |
Bailey SF, Blanquart F, Bataillon T, Kassen R. What drives parallel evolution?: How population size and mutational variation contribute to repeated evolution. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. PMID 27859467 DOI: 10.1002/Bies.201600176 |
0.355 |
|
| 2016 |
Blanquart F, Grabowski MK, Herbeck J, Nalugoda F, Serwadda D, Eller MA, Robb ML, Gray R, Kigozi G, Laeyendecker O, Lythgoe KA, Nakigozi G, Quinn TC, Reynolds SJ, Wawer MJ, et al. A transmission-virulence evolutionary trade-off explains attenuation of HIV-1 in Uganda. Elife. 5. PMID 27815945 DOI: 10.7554/Elife.20492 |
0.397 |
|
| 2016 |
Blanquart F, Valero M, Alves-de-Souza C, Dia A, Lepelletier F, Bigeard E, Jeanthon C, Destombe C, Guillou L. Evidence for parasite-mediated selection during short-lasting toxic algal blooms. Proceedings. Biological Sciences. 283. PMID 27798309 DOI: 10.1098/Rspb.2016.1870 |
0.36 |
|
| 2016 |
Lythgoe KA, Blanquart F, Pellis L, Fraser C. Large Variations in HIV-1 Viral Load Explained by Shifting-Mosaic Metapopulation Dynamics. Plos Biology. 14: e1002567. PMID 27706164 DOI: 10.1371/Journal.Pbio.1002567 |
0.426 |
|
| 2016 |
Blanquart F, Bataillon T. Epistasis and the Structure of Fitness Landscapes: Are Experimental Fitness Landscapes Compatible with Fisher's Geometric Model? Genetics. PMID 27052568 DOI: 10.1534/Genetics.115.182691 |
0.341 |
|
| 2014 |
Blanquart F, Achaz G, Bataillon T, Tenaillon O. Properties of selected mutations and genotypic landscapes under Fisher's geometric model. Evolution; International Journal of Organic Evolution. 68: 3537-54. PMID 25311558 DOI: 10.1111/Evo.12545 |
0.324 |
|
| 2014 |
Blanquart F, Gandon S. On the evolution of migration in heterogeneous environments. Evolution; International Journal of Organic Evolution. 68: 1617-28. PMID 24571236 DOI: 10.1111/Evo.12389 |
0.59 |
|
| 2013 |
Blanquart F, Kaltz O, Nuismer SL, Gandon S. A practical guide to measuring local adaptation. Ecology Letters. 16: 1195-205. PMID 23848550 DOI: 10.1111/Ele.12150 |
0.578 |
|
| 2013 |
Blanquart F, Gandon S. Time-shift experiments and patterns of adaptation across time and space. Ecology Letters. 16: 31-8. PMID 23034076 DOI: 10.1111/Ele.12007 |
0.61 |
|
| 2012 |
Blanquart F, Gandon S, Nuismer SL. The effects of migration and drift on local adaptation to a heterogeneous environment. Journal of Evolutionary Biology. 25: 1351-63. PMID 22568832 DOI: 10.1111/J.1420-9101.2012.02524.X |
0.597 |
|
| 2011 |
Blanquart F, Gandon S. Evolution of migration in a periodically changing environment. The American Naturalist. 177: 188-201. PMID 21460555 DOI: 10.1086/657953 |
0.594 |
|
| 2008 |
Nuismer SL, Otto SP, Blanquart F. When do host-parasite interactions drive the evolution of non-random mating? Ecology Letters. 11: 937-946. PMID 18522642 DOI: 10.1111/J.1461-0248.2008.01207.X |
0.341 |
|
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