| Year |
Citation |
Score |
| 2023 |
Garrison MA, Jang Y, Bae T, Cherskov A, Emery SB, Fasching L, Jones A, Moldovan JB, Molitor C, Pochareddy S, Peters MA, Shin JH, Wang Y, Yang X, Akbarian S, ... ... Urban AE, et al. Genomic data resources of the Brain Somatic Mosaicism Network for neuropsychiatric diseases. Scientific Data. 10: 813. PMID 37985666 DOI: 10.1038/s41597-023-02645-7 |
0.304 |
|
| 2023 |
Lee H, Greer SU, Pavlichin DS, Zhou B, Urban AE, Weissman T, Ji HP. Pan-conserved segment tags identify ultra-conserved sequences across assemblies in the human pangenome. Cell Reports Methods. 3: 100543. PMID 37671027 DOI: 10.1016/j.crmeth.2023.100543 |
0.337 |
|
| 2021 |
Zhu X, Zhou B, Pattni R, Gleason K, Tan C, Kalinowski A, Sloan S, Fiston-Lavier AS, Mariani J, Petrov D, Barres BA, Duncan L, Abyzov A, Vogel H, ... ... Urban AE, et al. Machine learning reveals bilateral distribution of somatic L1 insertions in human neurons and glia. Nature Neuroscience. PMID 33432196 DOI: 10.1038/s41593-020-00767-4 |
0.389 |
|
| 2020 |
Urban A. "…This Has to Do With My Identity. And I Don't Want to Make it Totally Transparent." Identity Relevance in the Attitudes of Affected People and Laypersons to the Handling of High-Throughput Genomic Data. Frontiers in Sociology. 5: 532357. PMID 33869478 DOI: 10.3389/fsoc.2020.532357 |
0.351 |
|
| 2020 |
Sekar S, Tomasini L, Proukakis C, Bae T, Manlove L, Jang Y, Scuderi S, Zhou B, Kalyva M, Amiri A, Mariani J, Sedlazeck F, Urban AE, Vaccarino F, Abyzov A. Complex mosaic structural variations in human fetal brains. Genome Research. PMID 33122304 DOI: 10.1101/gr.262667.120 |
0.309 |
|
| 2020 |
Zhang S, Zhang X, Purmann C, Ma S, Shrestha A, Davis KN, Ho M, Huang Y, Pattni R, Wong WH, Bernstein JA, Hallmayer J, Urban AE. Network Effects of the 15q13.3 Microdeletion on the Transcriptome and Epigenome in Human-Induced Neurons. Biological Psychiatry. PMID 32919612 DOI: 10.1016/J.Biopsych.2020.06.021 |
0.321 |
|
| 2020 |
Oh D, Strattan JS, Hur JK, Bento J, Urban AE, Song G, Cherry JM. CNN-Peaks: ChIP-Seq peak detection pipeline using convolutional neural networks that imitate human visual inspection. Scientific Reports. 10: 7933. PMID 32404971 DOI: 10.1038/S41598-020-64655-4 |
0.404 |
|
| 2020 |
Zhang X, Hong D, Ma S, Ward T, Ho M, Pattni R, Duren Z, Stankov A, Bade Shrestha S, Hallmayer J, Wong WH, Reiss AL, Urban AE. Integrated functional genomic analyses of Klinefelter and Turner syndromes reveal global network effects of altered X chromosome dosage. Proceedings of the National Academy of Sciences of the United States of America. PMID 32071206 DOI: 10.1073/Pnas.1910003117 |
0.375 |
|
| 2019 |
Ho SS, Urban AE, Mills RE. Structural variation in the sequencing era. Nature Reviews. Genetics. PMID 31729472 DOI: 10.1038/S41576-019-0180-9 |
0.472 |
|
| 2019 |
Garrett-Bakelman FE, Darshi M, Green SJ, Gur RC, Lin L, Macias BR, McKenna MJ, Meydan C, Mishra T, Nasrini J, Piening BD, Rizzardi LF, Sharma K, Siamwala JH, Taylor L, ... ... Urban AE, et al. The NASA Twins Study: A multidimensional analysis of a year-long human spaceflight. Science (New York, N.Y.). 364. PMID 30975860 DOI: 10.1126/Science.Aau8650 |
0.367 |
|
| 2019 |
Yang EW, Bahn JH, Hsiao EY, Tan BX, Sun Y, Fu T, Zhou B, Van Nostrand EL, Pratt GA, Freese P, Wei X, Quinones-Valdez G, Urban AE, Graveley BR, Burge CB, et al. Allele-specific binding of RNA-binding proteins reveals functional genetic variants in the RNA. Nature Communications. 10: 1338. PMID 30902979 DOI: 10.1038/S41467-019-09292-W |
0.365 |
|
| 2019 |
Zhou B, Ho SS, Greer SU, Spies N, Bell JM, Zhang X, Zhu X, Arthur JG, Byeon S, Pattni R, Saha I, Huang Y, Song G, Perrin D, Wong WH, ... ... Urban AE, et al. Haplotype-resolved and integrated genome analysis of the cancer cell line HepG2. Nucleic Acids Research. PMID 30864654 DOI: 10.1093/Nar/Gkz169 |
0.535 |
|
| 2019 |
Zhou B, Ho SS, Greer SU, Zhu X, Bell JM, Arthur JG, Spies N, Zhang X, Byeon S, Pattni R, Ben-Efraim N, Haney MS, Haraksingh RR, Song G, Ji HP, ... ... Urban AE, et al. Comprehensive, integrated, and phased whole-genome analysis of the primary ENCODE cell line K562. Genome Research. PMID 30737237 DOI: 10.1101/Gr.234948.118 |
0.506 |
|
| 2019 |
Zhang S, Zhang X, Ma S, Purmann C, Davis K, Wong WH, Bernstein J, Hallmayer J, Urban A. 81 INTEGRATED ANALYSIS OF GENE EXPRESSION, DNA METHYLATION AND CHROMATIN ACCESSIBILITY IN A HUMAN IPSC-TO-INDUCED-NEURON MODEL OF THE 15Q13.3 MICRODELETION European Neuropsychopharmacology. 29: S105. DOI: 10.1016/J.Euroneuro.2019.07.222 |
0.347 |
|
| 2019 |
Zhang X, Thomas W, Leung L, Zhou B, Muench K, Plastini M, Pattni R, Ho S, Ho M, Huang Y, Hallmayer J, Mourrain P, Palmer T, Urban A. 14 Comparative Functional Genomics Analyses Of The 16P11.2 Deletion And Duplication Cnvs In A Human Ipsc-To-Induced Neuron Model European Neuropsychopharmacology. 29. DOI: 10.1016/J.Euroneuro.2019.07.155 |
0.424 |
|
| 2019 |
Urban A. Cell Type Specific Multi-Level Analysis Of Neuropsychiatric Genomic Sequence Elements European Neuropsychopharmacology. 29. DOI: 10.1016/J.Euroneuro.2019.07.094 |
0.441 |
|
| 2019 |
Urban A, Zhu X, Zhou B, Sloan S, Pattni R, Fiston-Lavier A, Snyder M, Petrov D, Abyzov A, Vaccarino F, Barres B, Vogel H, Tamminga C, Levinson D. Sa94Machine Learning Analysis Of Ultra-Deep Whole-Genome Sequencing In Human Brain Reveals Somatic Genomic Retrotransposition In Glia As Well As In Neurons European Neuropsychopharmacology. 29. DOI: 10.1016/J.Euroneuro.2018.08.316 |
0.455 |
|
| 2019 |
Duan J, Urban A, Gejman P. Promises And Challenges Of Using Human Ipsc Models To Validate Rare And Common Genetic Variants Of Neuropsychiatric Disorders European Neuropsychopharmacology. 29. DOI: 10.1016/J.Euroneuro.2018.07.079 |
0.327 |
|
| 2018 |
Zhou B, Arthur JG, Ho SS, Pattni R, Huang Y, Wong WH, Urban AE. Extensive and deep sequencing of the Venter/HuRef genome for developing and benchmarking genome analysis tools. Scientific Data. 5: 180261. PMID 30561434 DOI: 10.1038/Sdata.2018.261 |
0.46 |
|
| 2018 |
Zhang X, Zhang Y, Zhu X, Purmann C, Haney MS, Ward T, Khechaduri A, Yao J, Weissman SM, Urban AE. Local and global chromatin interactions are altered by large genomic deletions associated with human brain development. Nature Communications. 9: 5356. PMID 30559385 DOI: 10.1038/S41467-018-07766-X |
0.603 |
|
| 2018 |
Velicky P, Meinhardt G, Plessl K, Vondra S, Weiss T, Haslinger P, Lendl T, Aumayr K, Mairhofer M, Zhu X, Schütz B, Hannibal RL, Lindau R, Weil B, Ernerudh J, ... ... Urban AE, et al. Genome amplification and cellular senescence are hallmarks of human placenta development. Plos Genetics. 14: e1007698. PMID 30312291 DOI: 10.1371/Journal.Pgen.1007698 |
0.447 |
|
| 2018 |
Xavier J, Zhou B, Bilan F, Zhang X, Gilbert-Dussardier B, Viaux-Savelon S, Pattni R, Ho SS, Cohen D, Levinson DF, Urban AE, Laurent-Levinson C. 1q21.1 microduplication: large verbal-nonverbal performance discrepancy and ddPCR assays of HYDIN/HYDIN2 copy number. Npj Genomic Medicine. 3: 24. PMID 30155272 DOI: 10.1038/S41525-018-0059-2 |
0.399 |
|
| 2018 |
Zhou B, Ho SS, Zhang X, Pattni R, Haraksingh RR, Urban AE. Whole-genome sequencing analysis of CNV using low-coverage and paired-end strategies is efficient and outperforms array-based CNV analysis. Journal of Medical Genetics. PMID 30061371 DOI: 10.1136/Jmedgenet-2018-105272 |
0.499 |
|
| 2018 |
Zhou B, Haney MS, Zhu X, Pattni R, Abyzov A, Urban AE. Detection and Quantification of Mosaic Genomic DNA Variation in Primary Somatic Tissues Using ddPCR: Analysis of Mosaic Transposable-Element Insertions, Copy-Number Variants, and Single-Nucleotide Variants. Methods in Molecular Biology (Clifton, N.J.). 1768: 173-190. PMID 29717444 DOI: 10.1007/978-1-4939-7778-9_11 |
0.395 |
|
| 2018 |
Urban A. 20.2 Analyzing The Molecular Effects Of Large Neuropsychiatric Cnvs With Ipsc Based Neuronal Tissue Culture Models. Schizophrenia Bulletin. 44. DOI: 10.1093/Schbul/Sby014.081 |
0.442 |
|
| 2017 |
Bae T, Tomasini L, Mariani J, Zhou B, Roychowdhury T, Franjic D, Pletikos M, Pattni R, Chen BJ, Venturini E, Riley-Gillis B, Sestan N, Urban AE, Abyzov A, Vaccarino FM. Different mutational rates and mechanisms in human cells at pregastrulation and neurogenesis. Science (New York, N.Y.). PMID 29217587 DOI: 10.1126/Science.Aan8690 |
0.366 |
|
| 2017 |
McConnell MJ, Moran JV, Abyzov A, Akbarian S, Bae T, Cortes-Ciriano I, Erwin JA, Fasching L, Flasch DA, Freed D, Ganz J, Jaffe AE, Kwan KY, Kwon M, Lodato MA, ... ... Urban AE, et al. Intersection of diverse neuronal genomes and neuropsychiatric disease: The Brain Somatic Mosaicism Network. Science (New York, N.Y.). 356. PMID 28450582 DOI: 10.1126/Science.Aal1641 |
0.39 |
|
| 2017 |
Haraksingh RR, Abyzov A, Urban AE. Comprehensive performance comparison of high-resolution array platforms for genome-wide Copy Number Variation (CNV) analysis in humans. Bmc Genomics. 18: 321. PMID 28438122 DOI: 10.1186/S12864-017-3658-X |
0.491 |
|
| 2017 |
Abyzov A, Tomasini L, Zhou B, Vasmatzis N, Coppola G, Amenduni M, Pattni R, Wilson M, Gerstein M, Weissman S, Urban AE, Vaccarino FM. One thousand somatic SNVs per skin fibroblast cell set baseline of mosaic mutational load with patterns that suggest proliferative origin. Genome Research. PMID 28235832 DOI: 10.1101/Gr.215517.116 |
0.543 |
|
| 2015 |
Li J, Ma Z, Shi M, Malty RH, Aoki H, Minic Z, Phanse S, Jin K, Wall DP, Zhang Z, Urban AE, Hallmayer J, Babu M, Snyder M. Identification of Human Neuronal Protein Complexes Reveals Biochemical Activities and Convergent Mechanisms of Action in Autism Spectrum Disorders. Cell Systems. 1: 361-374. PMID 26949739 DOI: 10.1016/J.Cels.2015.11.002 |
0.324 |
|
| 2015 |
Urban AE, Purmann C. Using iPSCs and genomics to catch CNVs in the act. Nature Genetics. 47: 100-1. PMID 25627897 DOI: 10.1038/Ng.3204 |
0.457 |
|
| 2014 |
Li J, Shi M, Ma Z, Zhao S, Euskirchen G, Ziskin J, Urban A, Hallmayer J, Snyder M. Integrated systems analysis reveals a molecular network underlying autism spectrum disorders. Molecular Systems Biology. 10: 774. PMID 25549968 DOI: 10.15252/Msb.20145487 |
0.43 |
|
| 2014 |
Mostafavi S, Battle A, Zhu X, Potash JB, Weissman MM, Shi J, Beckman K, Haudenschild C, McCormick C, Mei R, Gameroff MJ, Gindes H, Adams P, Goes FS, Mondimore FM, ... ... Urban AE, et al. Type I interferon signaling genes in recurrent major depression: increased expression detected by whole-blood RNA sequencing. Molecular Psychiatry. 19: 1267-74. PMID 24296977 DOI: 10.1038/Mp.2013.161 |
0.438 |
|
| 2014 |
Battle A, Mostafavi S, Zhu X, Potash JB, Weissman MM, McCormick C, Haudenschild CD, Beckman KB, Shi J, Mei R, Urban AE, Montgomery SB, Levinson DF, Koller D. Characterizing the genetic basis of transcriptome diversity through RNA-sequencing of 922 individuals. Genome Research. 24: 14-24. PMID 24092820 DOI: 10.1101/Gr.155192.113 |
0.516 |
|
| 2013 |
Mostafavi S, Battle A, Zhu X, Urban AE, Levinson D, Montgomery SB, Koller D. Normalizing RNA-sequencing data by modeling hidden covariates with prior knowledge. Plos One. 8: e68141. PMID 23874524 DOI: 10.1371/Journal.Pone.0068141 |
0.359 |
|
| 2013 |
Zhang Y, Haraksingh R, Grubert F, Abyzov A, Gerstein M, Weissman S, Urban AE. Child development and structural variation in the human genome. Child Development. 84: 34-48. PMID 23311762 DOI: 10.1111/Cdev.12051 |
0.607 |
|
| 2012 |
Abyzov A, Mariani J, Palejev D, Zhang Y, Haney MS, Tomasini L, Ferrandino AF, Rosenberg Belmaker LA, Szekely A, Wilson M, Kocabas A, Calixto NE, Grigorenko EL, Huttner A, Chawarska K, ... ... Urban AE, et al. Somatic copy number mosaicism in human skin revealed by induced pluripotent stem cells. Nature. 492: 438-42. PMID 23160490 DOI: 10.1038/Nature11629 |
0.573 |
|
| 2012 |
Wu J, Grzeda KR, Stewart C, Grubert F, Urban AE, Snyder MP, Marth GT. Copy Number Variation detection from 1000 Genomes Project exon capture sequencing data. Bmc Bioinformatics. 13: 305. PMID 23157288 DOI: 10.1186/1471-2105-13-305 |
0.461 |
|
| 2012 |
O'Huallachain M, Karczewski KJ, Weissman SM, Urban AE, Snyder MP. Extensive genetic variation in somatic human tissues. Proceedings of the National Academy of Sciences of the United States of America. 109: 18018-23. PMID 23043118 DOI: 10.1073/Pnas.1213736109 |
0.591 |
|
| 2012 |
Urban AE. A role of genomic copy number variation in the complex behavioral phenotype of alcohol dependence: a commentary. Alcoholism, Clinical and Experimental Research. 36: 1483-6. PMID 22909245 DOI: 10.1111/J.1530-0277.2012.01915.X |
0.394 |
|
| 2012 |
Winkelmann J, Lin L, Schormair B, Kornum BR, Faraco J, Plazzi G, Melberg A, Cornelio F, Urban AE, Pizza F, Poli F, Grubert F, Wieland T, Graf E, Hallmayer J, et al. Mutations in DNMT1 cause autosomal dominant cerebellar ataxia, deafness and narcolepsy. Human Molecular Genetics. 21: 2205-10. PMID 22328086 DOI: 10.1093/Hmg/Dds035 |
0.317 |
|
| 2011 |
Haraksingh RR, Abyzov A, Gerstein M, Urban AE, Snyder M. Genome-wide mapping of copy number variation in humans: comparative analysis of high resolution array platforms. Plos One. 6: e27859. PMID 22140474 DOI: 10.1371/Journal.Pone.0027859 |
0.481 |
|
| 2011 |
Stewart C, Kural D, Strömberg MP, Walker JA, Konkel MK, Stütz AM, Urban AE, Grubert F, Lam HY, Lee WP, Busby M, Indap AR, Garrison E, Huff C, Xing J, et al. A comprehensive map of mobile element insertion polymorphisms in humans. Plos Genetics. 7: e1002236. PMID 21876680 DOI: 10.1371/Journal.Pgen.1002236 |
0.455 |
|
| 2011 |
Zhang ZD, Du J, Lam H, Abyzov A, Urban AE, Snyder M, Gerstein M. Identification of genomic indels and structural variations using split reads. Bmc Genomics. 12: 375. PMID 21787423 DOI: 10.1186/1471-2164-12-375 |
0.481 |
|
| 2011 |
Abyzov A, Urban AE, Snyder M, Gerstein M. CNVnator: an approach to discover, genotype, and characterize typical and atypical CNVs from family and population genome sequencing. Genome Research. 21: 974-84. PMID 21324876 DOI: 10.1101/Gr.114876.110 |
0.464 |
|
| 2011 |
Mills RE, Walter K, Stewart C, Handsaker RE, Chen K, Alkan C, Abyzov A, Yoon SC, Ye K, Cheetham RK, Chinwalla A, Conrad DF, Fu Y, Grubert F, Hajirasouliha I, ... ... Urban AE, et al. Mapping copy number variation by population-scale genome sequencing. Nature. 470: 59-65. PMID 21293372 DOI: 10.1038/Nature09708 |
0.503 |
|
| 2011 |
Vaccarino FM, Urban AE, Stevens HE, Szekely A, Abyzov A, Grigorenko EL, Gerstein M, Weissman S. Annual Research Review: The promise of stem cell research for neuropsychiatric disorders. Journal of Child Psychology and Psychiatry, and Allied Disciplines. 52: 504-16. PMID 21204834 DOI: 10.1111/J.1469-7610.2010.02348.X |
0.475 |
|
| 2010 |
Grigorenko EL, Urban AE, Mencl E. Behavior, brain, and genome in genomic disorders: finding the correspondences. Journal of Developmental and Behavioral Pediatrics : Jdbp. 31: 602-9. PMID 20814258 DOI: 10.1097/Dbp.0B013E3181F5A0A1 |
0.376 |
|
| 2010 |
Kasowski M, Grubert F, Heffelfinger C, Hariharan M, Asabere A, Waszak SM, Habegger L, Rozowsky J, Shi M, Urban AE, Hong MY, Karczewski KJ, Huber W, Weissman SM, Gerstein MB, et al. Variation in transcription factor binding among humans. Science (New York, N.Y.). 328: 232-5. PMID 20299548 DOI: 10.1126/science.1183621 |
0.72 |
|
| 2009 |
Canaan A, Haviv I, Urban AE, Schulz VP, Hartman S, Zhang Z, Palejev D, Deisseroth AB, Lacy J, Snyder M, Gerstein M, Weissman SM. EBNA1 regulates cellular gene expression by binding cellular promoters. Proceedings of the National Academy of Sciences of the United States of America. 106: 22421-6. PMID 20080792 DOI: 10.1073/Pnas.0911676106 |
0.547 |
|
| 2009 |
Korbel JO, Tirosh-Wagner T, Urban AE, Chen XN, Kasowski M, Dai L, Grubert F, Erdman C, Gao MC, Lange K, Sobel EM, Barlow GM, Aylsworth AS, Carpenter NJ, Clark RD, et al. The genetic architecture of Down syndrome phenotypes revealed by high-resolution analysis of human segmental trisomies. Proceedings of the National Academy of Sciences of the United States of America. 106: 12031-6. PMID 19597142 DOI: 10.1073/Pnas.0813248106 |
0.727 |
|
| 2009 |
Demichelis F, Setlur SR, Beroukhim R, Perner S, Korbel JO, Lafargue CJ, Pflueger D, Pina C, Hofer MD, Sboner A, Svensson MA, Rickman DS, Urban A, Snyder M, Meyerson M, et al. Distinct genomic aberrations associated with ERG rearranged prostate cancer. Genes, Chromosomes & Cancer. 48: 366-80. PMID 19156837 DOI: 10.1002/Gcc.20647 |
0.366 |
|
| 2009 |
Canaan A, Schulz V, Mahajan M, Urban A, Weissman S. EBNA1—A virally encoded protein binds cellular host promoters in a unique sequence and directly interferes with cellular gene expression. Implications for genomics approaches in drug design Antiviral Research. 82: A69-A70. DOI: 10.1016/J.Antiviral.2009.02.171 |
0.561 |
|
| 2008 |
Hasin Y, Olender T, Khen M, Gonzaga-Jauregui C, Kim PM, Urban AE, Snyder M, Gerstein MB, Lancet D, Korbel JO. High-resolution copy-number variation map reflects human olfactory receptor diversity and evolution. Plos Genetics. 4: e1000249. PMID 18989455 DOI: 10.1371/Journal.Pgen.1000249 |
0.503 |
|
| 2008 |
Kim PM, Lam HY, Urban AE, Korbel JO, Affourtit J, Grubert F, Chen X, Weissman S, Snyder M, Gerstein MB. Analysis of copy number variants and segmental duplications in the human genome: Evidence for a change in the process of formation in recent evolutionary history. Genome Research. 18: 1865-74. PMID 18842824 DOI: 10.1101/Gr.081422.108 |
0.621 |
|
| 2008 |
Pan X, Urban AE, Palejev D, Schulz V, Grubert F, Hu Y, Snyder M, Weissman SM. A procedure for highly specific, sensitive, and unbiased whole-genome amplification. Proceedings of the National Academy of Sciences of the United States of America. 105: 15499-504. PMID 18832167 DOI: 10.1073/Pnas.0808028105 |
0.55 |
|
| 2008 |
Pelizzola M, Koga Y, Urban AE, Krauthammer M, Weissman S, Halaban R, Molinaro AM. MEDME: an experimental and analytical methodology for the estimation of DNA methylation levels based on microarray derived MeDIP-enrichment. Genome Research. 18: 1652-9. PMID 18765822 DOI: 10.1101/Gr.080721.108 |
0.523 |
|
| 2008 |
Korbel JO, Kim PM, Chen X, Urban AE, Weissman S, Snyder M, Gerstein MB. The current excitement about copy-number variation: how it relates to gene duplications and protein families. Current Opinion in Structural Biology. 18: 366-74. PMID 18511261 DOI: 10.1016/J.Sbi.2008.02.005 |
0.536 |
|
| 2008 |
Wu JQ, Du J, Rozowsky J, Zhang Z, Urban AE, Euskirchen G, Weissman S, Gerstein M, Snyder M. Systematic analysis of transcribed loci in ENCODE regions using RACE sequencing reveals extensive transcription in the human genome. Genome Biology. 9: R3. PMID 18173853 DOI: 10.1186/Gb-2008-9-1-R3 |
0.59 |
|
| 2007 |
Korbel JO, Urban AE, Affourtit JP, Godwin B, Grubert F, Simons JF, Kim PM, Palejev D, Carriero NJ, Du L, Taillon BE, Chen Z, Tanzer A, Saunders AC, Chi J, et al. Paired-end mapping reveals extensive structural variation in the human genome. Science (New York, N.Y.). 318: 420-6. PMID 17901297 DOI: 10.1126/Science.1149504 |
0.627 |
|
| 2007 |
Birney E, Stamatoyannopoulos JA, Dutta A, Guigó R, Gingeras TR, Margulies EH, Weng Z, Snyder M, Dermitzakis ET, Thurman RE, Kuehn MS, Taylor CM, Neph S, Koch CM, ... ... Urban AE, et al. Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. Nature. 447: 799-816. PMID 17571346 DOI: 10.1038/Nature05874 |
0.674 |
|
| 2007 |
Korbel JO, Urban AE, Grubert F, Du J, Royce TE, Starr P, Zhong G, Emanuel BS, Weissman SM, Snyder M, Gerstein MB. Systematic prediction and validation of breakpoints associated with copy-number variants in the human genome. Proceedings of the National Academy of Sciences of the United States of America. 104: 10110-5. PMID 17551006 DOI: 10.1073/Pnas.0703834104 |
0.623 |
|
| 2007 |
Emanuelsson O, Nagalakshmi U, Zheng D, Rozowsky JS, Urban AE, Du J, Lian Z, Stolc V, Weissman S, Snyder M, Gerstein MB. Assessing the performance of different high-density tiling microarray strategies for mapping transcribed regions of the human genome. Genome Research. 17: 886-97. PMID 17119069 DOI: 10.1101/Gr.5014606 |
0.615 |
|
| 2006 |
Urban AE, Korbel JO, Selzer R, Richmond T, Hacker A, Popescu GV, Cubells JF, Green R, Emanuel BS, Gerstein MB, Weissman SM, Snyder M. High-resolution mapping of DNA copy alterations in human chromosome 22 using high-density tiling oligonucleotide arrays. Proceedings of the National Academy of Sciences of the United States of America. 103: 4534-9. PMID 16537408 DOI: 10.1073/Pnas.0511340103 |
0.591 |
|
| 2004 |
Bertone P, Stolc V, Royce TE, Rozowsky JS, Urban AE, Zhu X, Rinn JL, Tongprasit W, Samanta M, Weissman S, Gerstein M, Snyder M. Global identification of human transcribed sequences with genome tiling arrays. Science (New York, N.Y.). 306: 2242-6. PMID 15539566 DOI: 10.1126/Science.1103388 |
0.631 |
|
| 2004 |
Feingold EA, Good PJ, Guyer MS, Kamholz S, Liefer L, Wetterstrand K, Collins FS, Gingeras TR, Kampa D, Sekinger EA, Cheng J, Hirsch H, Ghosh S, Zhu Z, Patel S, ... ... Urban AE, et al. The ENCODE (ENCyclopedia of DNA Elements) Project Science. 306: 636-640. PMID 15499007 DOI: 10.1126/Science.1105136 |
0.57 |
|
| 2003 |
Lian Z, Euskirchen G, Rinn J, Martone R, Bertone P, Hartman S, Royce T, Nelson K, Sayward F, Luscombe N, Yang J, Li JL, Miller P, Urban AE, Gerstein M, et al. Identification of novel functional elements in the human genome. Cold Spring Harbor Symposia On Quantitative Biology. 68: 317-22. PMID 15338632 DOI: 10.1101/Sqb.2003.68.317 |
0.586 |
|
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