Year |
Citation |
Score |
2022 |
Villegas JA, Sinha NJ, Teramoto N, Von Bargen CD, Pochan DJ, Saven JG. Computational Design of Single-Peptide Nanocages with Nanoparticle Templating. Molecules (Basel, Switzerland). 27. PMID 35209027 DOI: 10.3390/molecules27041237 |
0.32 |
|
2019 |
Sinha NJ, Wu D, Kloxin CJ, Saven JG, Jensen GV, Pochan DJ. Polyelectrolyte character of rigid rod peptide bundlemer chains constructed via hierarchical self-assembly. Soft Matter. PMID 31738361 DOI: 10.1039/C9Sm01894H |
0.371 |
|
2019 |
Wu D, Sinha N, Lee J, Sutherland BP, Halaszynski NI, Tian Y, Caplan J, Zhang HV, Saven JG, Kloxin CJ, Pochan DJ. Polymers with controlled assembly and rigidity made with click-functional peptide bundles. Nature. 574: 658-662. PMID 31666724 DOI: 10.1038/S41586-019-1683-4 |
0.502 |
|
2019 |
Xi J, Xiao J, Perez-Aguilar JM, Ping J, Johnson ATC, Saven JG, Liu R. Characterization of an engineered water-soluble variant of the full-length human mu opioid receptor. Journal of Biomolecular Structure & Dynamics. 1-9. PMID 31588852 DOI: 10.1080/07391102.2019.1677502 |
0.305 |
|
2018 |
Tian Y, Polzer FB, Zhang HV, Kiick KL, Saven JG, Pochan DJ. Nanotubes, Plates, and Needles: Pathway-Dependent Self-Assembly of Computationally Designed Peptides. Biomacromolecules. PMID 30299090 DOI: 10.1021/Acs.Biomac.8B01163 |
0.465 |
|
2018 |
Pulsipher KW, Bulos JA, Villegas JA, Saven JG, Dmochowski IJ. A Protein-Protein Host-Guest Complex: Thermostable Ferritin Encapsulating Positively Supercharged Green Fluorescent Protein. Protein Science : a Publication of the Protein Society. PMID 30051936 DOI: 10.1002/Pro.3483 |
0.394 |
|
2018 |
Haider MJ, Zhang HV, Sinha N, Fagan JA, Kiick KL, Saven JG, Pochan DJ. Self-assembly and soluble aggregate behavior of computationally designed coiled-coil peptide bundles. Soft Matter. PMID 29923575 DOI: 10.1039/C8Sm00435H |
0.399 |
|
2018 |
Tian Y, Zhang HV, Kiick KL, Saven JG, Pochan DJ. Fabrication of One- and Two-Dimensional Gold Nanoparticle Arrays on Computationally Designed Self-Assembled Peptide Templates Chemistry of Materials. 30: 8510-8520. DOI: 10.1021/Acs.Chemmater.8B03206 |
0.447 |
|
2017 |
Eibling MJ, MacDermaid CM, Qian Z, Lanci CJ, Park SJ, Saven JG. Controlling association and separation of gold nanoparticles with computationally designed zinc-coordinating proteins. Journal of the American Chemical Society. PMID 29148741 DOI: 10.1021/Jacs.7B04786 |
0.756 |
|
2017 |
Ping J, Pulsipher KW, Vishnubhotla R, Villegas JA, Hicks TL, Honig S, Saven JG, Dmochowski IJ, Johnson ATC. Structural-functional analysis of engineered protein-nanoparticle assemblies using graphene microelectrodes. Chemical Science. 8: 5329-5334. PMID 28970912 DOI: 10.1039/C7Sc01565H |
0.333 |
|
2017 |
Pulsipher KW, Villegas JA, Roose BW, Hicks TL, Yoon J, Saven JG, Dmochowski IJ. Thermophilic Ferritin 24mer Assembly and Nanoparticle Encapsulation Modulated by Interdimer Electrostatic Repulsion. Biochemistry. PMID 28682599 DOI: 10.1021/Acs.Biochem.7B00296 |
0.402 |
|
2017 |
Tian Y, Zhang HV, Kiick KL, Saven JG, Pochan DJ. Transition from disordered aggregates to ordered lattices: kinetic control of the assembly of a computationally designed peptide. Organic & Biomolecular Chemistry. PMID 28639674 DOI: 10.1039/C7Ob01197K |
0.47 |
|
2017 |
Sungwienwong I, Hostetler ZM, Blizzard RJ, Porter JJ, Driggers CM, Mbengi LZ, Villegas JA, Speight LC, Saven JG, Perona JJ, Kohli RM, Mehl RA, Petersson EJ. Improving target amino acid selectivity in a permissive aminoacyl tRNA synthetase through counter-selection. Organic & Biomolecular Chemistry. PMID 28397914 DOI: 10.1039/C7Ob00582B |
0.317 |
|
2016 |
Zhang HV, Polzer F, Haider MJ, Tian Y, Villegas JA, Kiick KL, Pochan DJ, Saven JG. Computationally designed peptides for self-assembly of nanostructured lattices. Science Advances. 2: e1600307. PMID 27626071 DOI: 10.1126/Sciadv.1600307 |
0.498 |
|
2016 |
Naylor CH, Kybert NJ, Schneier C, Xi J, Romero G, Saven JG, Liu R, Johnson AT. Scalable Production of Molybdenum Disulfide-Based Biosensors. Acs Nano. PMID 27227361 DOI: 10.1021/Acsnano.6B02137 |
0.31 |
|
2016 |
Polizzi NF, Eibling MJ, Perez-Aguilar JM, Rawson J, Lanci CJ, Fry HC, Beratan DN, Saven JG, Therien MJ. Photoinduced Electron Transfer Elicits a Change in the Static Dielectric Constant of a de Novo Designed Protein. Journal of the American Chemical Society. PMID 26840013 DOI: 10.1021/Jacs.5B13180 |
0.762 |
|
2015 |
Gao L, Liu W, Lee OS, Dmochowski IJ, Saven JG. Xe affinities of water-soluble cryptophanes and the role of confined water. Chemical Science. 6: 7238-7248. PMID 29861959 DOI: 10.1039/C5Sc02401C |
0.308 |
|
2015 |
Niedzwiecki DJ, Lanci CJ, Shemer G, Cheng PS, Saven JG, Drndić M. Observing Changes in the Structure and Oligomerization State of a Helical Protein Dimer Using Solid-State Nanopores. Acs Nano. 9: 8907-15. PMID 26262433 DOI: 10.1021/Acsnano.5B02714 |
0.772 |
|
2014 |
Sathaye S, Zhang H, Sonmez C, Schneider JP, MacDermaid CM, Von Bargen CD, Saven JG, Pochan DJ. Engineering complementary hydrophobic interactions to control β-hairpin peptide self-assembly, network branching, and hydrogel properties. Biomacromolecules. 15: 3891-900. PMID 25251904 DOI: 10.1021/Bm500874T |
0.738 |
|
2014 |
Sathaye S, Zhang H, Sonmez C, Schneider JP, MacDermaid CM, Von Bargen CD, Saven JG, Pochan DJ. Engineering complementary hydrophobic interactions to control β-hairpin peptide self-assembly, network branching, and hydrogel properties. Biomacromolecules. 15: 3891-900. PMID 25251904 DOI: 10.1021/Bm500874T |
0.738 |
|
2014 |
Corcelli SA, Laird BB, Saven JG, Schmidt JR. Tribute to James L. Skinner. The Journal of Physical Chemistry. B. 118: 7669-70. PMID 25031097 DOI: 10.1021/Jp5035486 |
0.597 |
|
2014 |
Corcelli SA, Laird BB, Saven JG, Schmidt JR. Tribute to James L. Skinner. The Journal of Physical Chemistry. B. 118: 7669-70. PMID 25031097 DOI: 10.1021/Jp5035486 |
0.597 |
|
2013 |
Von Bargen CD, MacDermaid CM, Lee OS, Deria P, Therien MJ, Saven JG. Origins of the helical wrapping of phenyleneethynylene polymers about single-walled carbon nanotubes. The Journal of Physical Chemistry. B. 117: 12953-65. PMID 23941695 DOI: 10.1021/Jp402140T |
0.739 |
|
2013 |
Fry HC, Lehmann A, Sinks LE, Asselberghs I, Tronin A, Krishnan V, Blasie JK, Clays K, DeGrado WF, Saven JG, Therien MJ. Computational de novo design and characterization of a protein that selectively binds a highly hyperpolarizable abiological chromophore. Journal of the American Chemical Society. 135: 13914-26. PMID 23931685 DOI: 10.1021/Ja4067404 |
0.434 |
|
2013 |
Perez-Aguilar JM, Xi J, Matsunaga F, Cui X, Selling B, Saven JG, Liu R. A computationally designed water-soluble variant of a G-protein-coupled receptor: the human mu opioid receptor. Plos One. 8: e66009. PMID 23799068 DOI: 10.1371/Journal.Pone.0066009 |
0.372 |
|
2012 |
Lanci CJ, MacDermaid CM, Kang SG, Acharya R, North B, Yang X, Qiu XJ, DeGrado WF, Saven JG. Computational design of a protein crystal. Proceedings of the National Academy of Sciences of the United States of America. 109: 7304-9. PMID 22538812 DOI: 10.1073/Pnas.1112595109 |
0.772 |
|
2012 |
Lanci CJ, MacDermaid CM, Kang SG, Acharya R, North B, Yang X, Qiu XJ, DeGrado WF, Saven JG. Computational design of a protein crystal. Proceedings of the National Academy of Sciences of the United States of America. 109: 7304-9. PMID 22538812 DOI: 10.1073/Pnas.1112595109 |
0.772 |
|
2012 |
Liu R, Perez-Aguilar JM, Liang D, Saven JG. Binding site and affinity prediction of general anesthetics to protein targets using docking. Anesthesia and Analgesia. 114: 947-55. PMID 22392968 DOI: 10.1213/Ane.0B013E31824C4Def |
0.319 |
|
2012 |
Cui T, Mowrey D, Bondarenko V, Tillman T, Ma D, Landrum E, Perez-Aguilar JM, He J, Wang W, Saven JG, Eckenhoff RG, Tang P, Xu Y. NMR structure and dynamics of a designed water-soluble transmembrane domain of nicotinic acetylcholine receptor. Biochimica Et Biophysica Acta. 1818: 617-26. PMID 22155685 DOI: 10.1016/J.Bbamem.2011.11.021 |
0.445 |
|
2011 |
Hiesinger W, Perez-Aguilar JM, Atluri P, Marotta NA, Frederick JR, Fitzpatrick JR, McCormick RC, Muenzer JR, Yang EC, Levit RD, Yuan LJ, Macarthur JW, Saven JG, Woo YJ. Computational protein design to reengineer stromal cell-derived factor-1α generates an effective and translatable angiogenic polypeptide analog. Circulation. 124: S18-26. PMID 21911811 DOI: 10.1161/Circulationaha.110.009431 |
0.356 |
|
2011 |
Diaz JE, Lin CS, Kunishiro K, Feld BK, Avrantinis SK, Bronson J, Greaves J, Saven JG, Weiss GA. Computational design and selections for an engineered, thermostable terpene synthase. Protein Science : a Publication of the Protein Society. 20: 1597-606. PMID 21739507 DOI: 10.1002/Pro.691 |
0.313 |
|
2011 |
Petty TJ, Emamzadah S, Costantino L, Petkova I, Stavridi ES, Saven JG, Vauthey E, Halazonetis TD. An induced fit mechanism regulates p53 DNA binding kinetics to confer sequence specificity. The Embo Journal. 30: 2167-76. PMID 21522129 DOI: 10.1038/Emboj.2011.127 |
0.702 |
|
2011 |
Saven JG. Computational protein design: engineering molecular diversity, nonnatural enzymes, nonbiological cofactor complexes, and membrane proteins. Current Opinion in Chemical Biology. 15: 452-7. PMID 21493122 DOI: 10.1016/J.Cbpa.2011.03.014 |
0.446 |
|
2011 |
Samish I, MacDermaid CM, Perez-Aguilar JM, Saven JG. Theoretical and computational protein design. Annual Review of Physical Chemistry. 62: 129-49. PMID 21128762 DOI: 10.1146/Annurev-Physchem-032210-103509 |
0.788 |
|
2011 |
Samish I, MacDermaid CM, Perez-Aguilar JM, Saven JG. Theoretical and computational protein design. Annual Review of Physical Chemistry. 62: 129-49. PMID 21128762 DOI: 10.1146/Annurev-Physchem-032210-103509 |
0.788 |
|
2010 |
Saven JG. Computational protein design: Advances in the design and redesign of biomolecular nanostructures. Current Opinion in Colloid & Interface Science. 15: 13-17. PMID 21544231 DOI: 10.1016/J.Cocis.2009.06.002 |
0.465 |
|
2010 |
Fry HC, Lehmann A, Saven JG, DeGrado WF, Therien MJ. Computational design and elaboration of a de novo heterotetrameric alpha-helical protein that selectively binds an emissive abiological (porphinato)zinc chromophore. Journal of the American Chemical Society. 132: 3997-4005. PMID 20192195 DOI: 10.1021/Ja907407M |
0.377 |
|
2009 |
Griffon N, Jin W, Petty TJ, Millar J, Badellino KO, Saven JG, Marchadier DH, Kempner ES, Billheimer J, Glick JM, Rader DJ. Identification of the active form of endothelial lipase, a homodimer in a head-to-tail conformation. The Journal of Biological Chemistry. 284: 23322-30. PMID 19567873 DOI: 10.1074/Jbc.M109.037002 |
0.695 |
|
2009 |
Peterson ME, Chen F, Saven JG, Roos DS, Babbitt PC, Sali A. Evolutionary constraints on structural similarity in orthologs and paralogs. Protein Science : a Publication of the Protein Society. 18: 1306-15. PMID 19472362 DOI: 10.1002/Pro.143 |
0.437 |
|
2009 |
Tang J, Kang SG, Saven JG, Gai F. Characterization of the cofactor-induced folding mechanism of a zinc-binding peptide using computationally designed mutants. Journal of Molecular Biology. 389: 90-102. PMID 19361525 DOI: 10.1016/J.Jmb.2009.03.074 |
0.366 |
|
2009 |
Szep S, Park S, Boder ET, Van Duyne GD, Saven JG. Structural coupling between FKBP12 and buried water. Proteins. 74: 603-11. PMID 18704951 DOI: 10.1002/Prot.22176 |
0.396 |
|
2009 |
Cui T, Tang P, Saven JG, Eckenhoff RG, Xu Y. NMR Structure of Water-Solubilized Transmembrane Domain of Nicotinic Acetylcholine Receptor Biophysical Journal. 96: 429a. DOI: 10.1016/J.Bpj.2008.12.2197 |
0.324 |
|
2008 |
Butts CA, Swift J, Kang SG, Di Costanzo L, Christianson DW, Saven JG, Dmochowski IJ. Directing noble metal ion chemistry within a designed ferritin protein. Biochemistry. 47: 12729-39. PMID 18991401 DOI: 10.1021/Bi8016735 |
0.351 |
|
2008 |
McAllister KA, Zou H, Cochran FV, Bender GM, Senes A, Fry HC, Nanda V, Keenan PA, Lear JD, Saven JG, Therien MJ, Blasie JK, DeGrado WF. Using alpha-helical coiled-coils to design nanostructured metalloporphyrin arrays. Journal of the American Chemical Society. 130: 11921-7. PMID 18710226 DOI: 10.1021/Ja800697G |
0.389 |
|
2008 |
Lehmann A, Saven JG. Computational design of four-helix bundle proteins that bind nonbiological cofactors. Biotechnology Progress. 24: 74-9. PMID 18197672 DOI: 10.1021/Bp070178Q |
0.321 |
|
2008 |
Lehmann A, Saven JG. Computational design of four-helix bundle proteins that bind nonbiological cofactors. Biotechnology Progress. 24: 74-9. PMID 18197672 DOI: 10.1021/Bp070178Q |
0.321 |
|
2007 |
Philibert P, Stoessel A, Wang W, Sibler AP, Bec N, Larroque C, Saven JG, Courtête J, Weiss E, Martineau P. A focused antibody library for selecting scFvs expressed at high levels in the cytoplasm. Bmc Biotechnology. 7: 81. PMID 18034894 DOI: 10.1186/1472-6750-7-81 |
0.332 |
|
2007 |
Bender GM, Lehmann A, Zou H, Cheng H, Fry HC, Engel D, Therien MJ, Blasie JK, Roder H, Saven JG, DeGrado WF. De novo design of a single-chain diphenylporphyrin metalloprotein. Journal of the American Chemical Society. 129: 10732-40. PMID 17691729 DOI: 10.1021/Ja071199J |
0.367 |
|
2007 |
Kang SG, Saven JG. Computational protein design: structure, function and combinatorial diversity. Current Opinion in Chemical Biology. 11: 329-34. PMID 17524729 DOI: 10.1016/J.Cbpa.2007.05.006 |
0.46 |
|
2007 |
Kono H, Wang W, Saven JG. Combinatorial protein design strategies using computational methods. Methods in Molecular Biology (Clifton, N.J.). 352: 3-22. PMID 17041256 DOI: 10.1385/1-59745-187-8:3 |
0.455 |
|
2006 |
Swift J, Wehbi WA, Kelly BD, Stowell XF, Saven JG, Dmochowski IJ. Design of functional ferritin-like proteins with hydrophobic cavities. Journal of the American Chemical Society. 128: 6611-9. PMID 16704261 DOI: 10.1021/Ja057069X |
0.404 |
|
2006 |
Park S, Xu Y, Stowell XF, Gai F, Saven JG, Boder ET. Limitations of yeast surface display in engineering proteins of high thermostability. Protein Engineering, Design & Selection : Peds. 19: 211-7. PMID 16537642 DOI: 10.1093/Protein/Gzl003 |
0.382 |
|
2006 |
Bunagan MR, Yang X, Saven JG, Gai F. Ultrafast folding of a computationally designed Trp-cage mutant: Trp2-cage. The Journal of Physical Chemistry. B. 110: 3759-63. PMID 16494434 DOI: 10.1021/Jp055288Z |
0.496 |
|
2006 |
Park S, Saven JG. Simulation of pH-dependent edge strand rearrangement in human beta-2 microglobulin. Protein Science : a Publication of the Protein Society. 15: 200-7. PMID 16322574 DOI: 10.1110/Ps.051814306 |
0.322 |
|
2006 |
Cochran FV, Wu SP, Wang W, Nanda V, Saven JG, Therien aMJ, DeGrado WF. Computational De Novo Design and Characterization of a Four-Helix Bundle Protein that Selectively Binds a Nonbiological Cofactor [J. Am. Chem. Soc. 2005, 127, 1346−1347]. Journal of the American Chemical Society. 128: 663-663. DOI: 10.1021/Ja059923Q |
0.41 |
|
2005 |
Biswas P, Zou J, Saven JG. Statistical theory for protein ensembles with designed energy landscapes. The Journal of Chemical Physics. 123: 154908. PMID 16252973 DOI: 10.1063/1.2062047 |
0.414 |
|
2005 |
Nanda V, Rosenblatt MM, Osyczka A, Kono H, Getahun Z, Dutton PL, Saven JG, Degrado WF. De novo design of a redox-active minimal rubredoxin mimic. Journal of the American Chemical Society. 127: 5804-5. PMID 15839675 DOI: 10.1021/Ja050553F |
0.347 |
|
2005 |
Park S, Boder ET, Saven JG. Modulating the DNA affinity of Elk-1 with computationally selected mutations. Journal of Molecular Biology. 348: 75-83. PMID 15808854 DOI: 10.1016/J.Jmb.2004.12.062 |
0.347 |
|
2005 |
Cochran FV, Wu SP, Wang W, Nanda V, Saven JG, Therien MJ, DeGrado WF. Computational de novo design and characterization of a four-helix bundle protein that selectively binds a nonbiological cofactor. Journal of the American Chemical Society. 127: 1346-7. PMID 15686346 DOI: 10.1021/Ja044129A |
0.449 |
|
2005 |
Park S, Saven JG. Chapter 18 Computationally Assisted Protein Design Annual Reports in Computational Chemistry. 1: 245-253. DOI: 10.1016/S1574-1400(05)01018-2 |
0.469 |
|
2005 |
Yang X, Saven JG. Computational methods for protein design and protein sequence variability: Biased Monte Carlo and replica exchange Chemical Physics Letters. 401: 205-210. DOI: 10.1016/J.Cplett.2004.10.153 |
0.49 |
|
2005 |
Park S, Kono H, Wang W, Boder ET, Saven JG. Progress in the development and application of computational methods for probabilistic protein design Computers and Chemical Engineering. 29: 407-421. DOI: 10.1016/J.Compchemeng.2004.07.037 |
0.482 |
|
2004 |
Park S, Yang X, Saven JG. Advances in computational protein design. Current Opinion in Structural Biology. 14: 487-94. PMID 15313244 DOI: 10.1016/J.Sbi.2004.06.002 |
0.478 |
|
2004 |
Park S, Yang X, Saven JG. Advances in computational protein design. Current Opinion in Structural Biology. 14: 487-94. PMID 15313244 DOI: 10.1016/J.Sbi.2004.06.002 |
0.478 |
|
2004 |
Slovic AM, Kono H, Lear JD, Saven JG, DeGrado WF. Computational design of water-soluble analogues of the potassium channel KcsA. Proceedings of the National Academy of Sciences of the United States of America. 101: 1828-33. PMID 14766985 DOI: 10.1073/Pnas.0306417101 |
0.374 |
|
2004 |
Park S, Stowell XF, Wang W, Yang X, Saven JG. Computational protein design and discovery Annual Reports On the Progress of Chemistry - Section C. 100: 195-236. DOI: 10.1039/B313669H |
0.562 |
|
2004 |
Lee OS, Saven JG. Simulation studies of a helical m-phenylene ethynylene foldamer Journal of Physical Chemistry B. 108: 11988-11994. DOI: 10.1021/Jp048642M |
0.336 |
|
2004 |
Zhu Y, Fu X, Wang T, Tamura A, Takada S, Saven JG, Gai F. Guiding the search for a protein's maximum rate of folding Chemical Physics. 307: 99-109. DOI: 10.1016/J.Chemphys.2004.05.008 |
0.592 |
|
2003 |
Fu X, Kono H, Saven JG. Probabilistic approach to the design of symmetric protein quaternary structures. Protein Engineering. 16: 971-7. PMID 14983077 DOI: 10.1093/Protein/Gzg132 |
0.571 |
|
2003 |
Fu X, Kono H, Saven JG. Probabilistic approach to the design of symmetric protein quaternary structures. Protein Engineering. 16: 971-7. PMID 14983077 DOI: 10.1093/Protein/Gzg132 |
0.571 |
|
2003 |
Calhoun JR, Kono H, Lahr S, Wang W, DeGrado WF, Saven JG. Computational design and characterization of a monomeric helical dinuclear metalloprotein. Journal of Molecular Biology. 334: 1101-15. PMID 14643669 DOI: 10.1016/J.Jmb.2003.10.004 |
0.489 |
|
2003 |
Saven JG. Connecting statistical and optimized potentials in protein folding via a generalized foldability criterion Journal of Chemical Physics. 118: 6133-6136. DOI: 10.1063/1.1565995 |
0.346 |
|
2003 |
Zou J, Saven JG. Using self-consistent fields to bias Monte Carlo methods with applications to designing and sampling protein sequences Journal of Chemical Physics. 118: 3843-3854. DOI: 10.1063/1.1539845 |
0.378 |
|
2002 |
Saven JG. Combinatorial protein design. Current Opinion in Structural Biology. 12: 453-8. PMID 12163067 DOI: 10.2142/Biophys.43.186 |
0.438 |
|
2001 |
Saven JG. Designing protein energy landscapes. Chemical Reviews. 101: 3113-30. PMID 11710064 DOI: 10.1021/Cr000058W |
0.388 |
|
2001 |
Kono H, Saven JG. Statistical theory for protein combinatorial libraries. Packing interactions, backbone flexibility, and the sequence variability of a main-chain structure. Journal of Molecular Biology. 306: 607-28. PMID 11178917 DOI: 10.1006/Jmbi.2000.4422 |
0.44 |
|
2000 |
Zou J, Saven JG. Statistical theory of combinatorial libraries of folding proteins: energetic discrimination of a target structure. Journal of Molecular Biology. 296: 281-94. PMID 10656832 DOI: 10.1006/Jmbi.1999.3426 |
0.368 |
|
1999 |
Prince RB, Saven JG, Wolynes PG, Moore JS. Cooperative conformational transitions in phenylene ethynylene oligomers: Chain-length dependence Journal of the American Chemical Society. 121: 3114-3121. DOI: 10.1021/Ja983995I |
0.596 |
|
1997 |
Nelson JC, Saven JG, Moore JS, Wolynes PG. Solvophobically driven folding of nonbiological oligomers. Science (New York, N.Y.). 277: 1793-6. PMID 9295264 DOI: 10.1126/Science.277.5333.1793 |
0.616 |
|
1997 |
Stephens MD, Saven JG, Skinner JL. Molecular theory of electronic spectroscopy in nonpolar fluids: Ultrafast solvation dynamics and absorption and emission line shapes Journal of Chemical Physics. 106: 2129-2144. DOI: 10.1063/1.473144 |
0.61 |
|
1997 |
Saven JG, Wolynes PG. Statistical mechanics of the combinatorial synthesis and analysis of folding macromolecules Journal of Physical Chemistry B. 101: 8375-8389. DOI: 10.1021/Jp971707J |
0.646 |
|
1996 |
Saven JG, Wolynes PG. Local conformational signals and the statistical thermodynamics of collapsed helical proteins. Journal of Molecular Biology. 257: 199-216. PMID 8632455 DOI: 10.1006/Jmbi.1996.0156 |
0.606 |
|
1996 |
Wang J, Saven JG, Wolynes PG. Kinetics In A Globally Connected, Correlated Random Energy Model Journal of Chemical Physics. 105: 11276-11284. DOI: 10.1063/1.472869 |
0.589 |
|
1996 |
Wang J, Saven JG, Wolynes PG. Kinetics in a globally connected, correlated random energy model Journal of Chemical Physics. 105: 11276-11284. |
0.518 |
|
1994 |
Saven JG, Wang J, Wolynes PG. Kinetics of protein folding: The dynamics of globally connected rough energy landscapes with biases Journal of Chemical Physics. 101: 11037-11043. DOI: 10.1063/1.467855 |
0.626 |
|
1994 |
Saven JG, Wang J, Wolynes PG. Kinetics of protein folding: The dynamics of globally connected rough energy landscapes with biases The Journal of Chemical Physics. 101: 11037-11043. |
0.584 |
|
1993 |
Saven JG, Skinner JL. A molecular theory of the line shape: Inhomogeneous and homogeneous electronic spectra of dilute chromophores in nonpolar fluids The Journal of Chemical Physics. 99: 4391-4402. DOI: 10.1063/1.466092 |
0.605 |
|
1991 |
Saven JG, Skinner JL, Wright JR. Classical and quantum continuum percolation with hard core interactions Journal of Chemical Physics. 94: 6153-6159. DOI: 10.1063/1.460401 |
0.588 |
|
Low-probability matches (unlikely to be authored by this person) |
2013 |
Deria P, Von Bargen CD, Olivier JH, Kumbhar AS, Saven JG, Therien MJ. Single-handed helical wrapping of single-walled carbon nanotubes by chiral, ionic, semiconducting polymers. Journal of the American Chemical Society. 135: 16220-34. PMID 24070370 DOI: 10.1021/Ja408430V |
0.297 |
|
2009 |
Williams F, Chen GF, Mattar SM, Scudder PH, Trieber DA, Saven JG, Whritenour DC, Cimino P, Barone V. Magneto-structural relationships for radical cation and neutral pyridinophane structures with intrabridgehead nitrogen atoms. An integrated experimental and quantum mechanical study. The Journal of Physical Chemistry. B. 113: 9026-34. PMID 19507811 DOI: 10.1021/Jp902493E |
0.297 |
|
2006 |
Bronson J, Lee OS, Saven JG. Molecular Dynamics Simulation of WSK-3, a Computationally Designed, Water-Soluble Variant of the Integral Membrane Protein KcsA. Biophysical Journal. 90: 1156-63. PMID 16299086 DOI: 10.1529/Biophysj.105.068965 |
0.296 |
|
2006 |
Bronson J, Lee OS, Saven JG. Molecular Dynamics Simulation of WSK-3, a Computationally Designed, Water-Soluble Variant of the Integral Membrane Protein KcsA. Biophysical Journal. 90: 1156-63. PMID 16299086 DOI: 10.1529/Biophysj.105.068965 |
0.296 |
|
2002 |
Wang W, Saven JG. Designing gene libraries from protein profiles for combinatorial protein experiments. Nucleic Acids Research. 30: e120. PMID 12409479 DOI: 10.1093/Nar/Gnf119 |
0.294 |
|
2002 |
Wang W, Saven JG. Designing gene libraries from protein profiles for combinatorial protein experiments. Nucleic Acids Research. 30: e120. PMID 12409479 DOI: 10.1093/Nar/Gnf119 |
0.294 |
|
2011 |
Khan NS, Perez-Aguilar JM, Kaufmann T, Hill PA, Taratula O, Lee OS, Carroll PJ, Saven JG, Dmochowski IJ. Multiple hindered rotators in a gyroscope-inspired tribenzylamine hemicryptophane. The Journal of Organic Chemistry. 76: 1418-24. PMID 21271707 DOI: 10.1021/Jo102480S |
0.29 |
|
2022 |
Guo R, Sinha NJ, Misra R, Tang Y, Langenstein M, Kim K, Fagan JA, Kloxin CJ, Jensen G, Pochan DJ, Saven JG. Computational Design of Homotetrameric Peptide Bundle Variants Spanning a Wide Range of Charge States. Biomacromolecules. PMID 35312288 DOI: 10.1021/acs.biomac.1c01539 |
0.282 |
|
2012 |
Perez-Aguilar JM, Saven JG. Computational design of membrane proteins. Structure (London, England : 1993). 20: 5-14. PMID 22244752 DOI: 10.1016/J.Str.2011.12.003 |
0.28 |
|
2012 |
Perez-Aguilar JM, Saven JG. Computational design of membrane proteins. Structure (London, England : 1993). 20: 5-14. PMID 22244752 DOI: 10.1016/J.Str.2011.12.003 |
0.28 |
|
2012 |
Schramm CA, Hannigan BT, Donald JE, Keasar C, Saven JG, Degrado WF, Samish I. Knowledge-based potential for positioning membrane-associated structures and assessing residue-specific energetic contributions. Structure (London, England : 1993). 20: 924-35. PMID 22579257 DOI: 10.1016/J.Str.2012.03.016 |
0.279 |
|
2012 |
Schramm CA, Hannigan BT, Donald JE, Keasar C, Saven JG, Degrado WF, Samish I. Knowledge-based potential for positioning membrane-associated structures and assessing residue-specific energetic contributions. Structure (London, England : 1993). 20: 924-35. PMID 22579257 DOI: 10.1016/J.Str.2012.03.016 |
0.279 |
|
2006 |
North B, Cristian L, Fu Stowell X, Lear JD, Saven JG, Degrado WF. Characterization of a membrane protein folding motif, the Ser zipper, using designed peptides. Journal of Molecular Biology. 359: 930-9. PMID 16697010 DOI: 10.1016/J.Jmb.2006.04.001 |
0.277 |
|
2022 |
Sinha NJ, Guo R, Misra R, Fagan J, Faraone A, Kloxin CJ, Saven JG, Jensen GV, Pochan DJ. Colloid-like solution behavior of computationally designed coiled coil bundlemers. Journal of Colloid and Interface Science. 606: 1974-1982. PMID 34749446 DOI: 10.1016/j.jcis.2021.09.184 |
0.276 |
|
2004 |
Kono H, Solvic AM, Lear JD, Saven JG, DeGrado WF. 2SD06 Computational design of water-soluble analogues of the potassium channel KcsA Seibutsu Butsuri. 44. DOI: 10.2142/Biophys.44.S18_3 |
0.272 |
|
2007 |
Chowdhury P, Wang W, Lavender S, Bunagan MR, Klemke JW, Tang J, Saven JG, Cooperman BS, Gai F. Fluorescence correlation spectroscopic study of serpin depolymerization by computationally designed peptides. Journal of Molecular Biology. 369: 462-73. PMID 17442346 DOI: 10.1016/J.Jmb.2007.03.042 |
0.265 |
|
2015 |
Ping J, Xi J, Saven JG, Liu R, Johnson AT. Quantifying the effect of ionic screening with protein-decorated graphene transistors. Biosensors & Bioelectronics. PMID 26626969 DOI: 10.1016/J.Bios.2015.11.052 |
0.262 |
|
2024 |
Patkar SS, Tang Y, Zhang T, Bisram AM, Saven JG, Pochan DJ, Kiick KL. Genetically Fused Resilin-like Polypeptide-Coiled Coil Bundlemer Conjugates Exhibit Tunable Multistimuli-Responsiveness and Undergo Nanofibrillar Assembly. Biomacromolecules. 25: 2449-2461. PMID 38484154 DOI: 10.1021/acs.biomac.3c01402 |
0.26 |
|
2005 |
Koh SK, Ananthasuresh GK, Yang X, Saven J. Continuous optimization method for the sequence design of protein models consisting of multiple monomer types 2005 Nsti Nanotechnology Conference and Trade Show - Nsti Nanotech 2005 Technical Proceedings. 520-523. |
0.256 |
|
2018 |
Ping J, Vishnubhotla R, Xi J, Ducos P, Saven JG, Liu R, Johnson ATC. All-Electronic Quantification of Neuropeptide-Receptor Interaction Using a Bias-Free Functionalized Graphene Microelectrode. Acs Nano. PMID 29634231 DOI: 10.1021/Acsnano.7B07474 |
0.245 |
|
2021 |
Sinha NJ, Langenstein MG, Pochan DJ, Kloxin CJ, Saven JG. Peptide Design and Self-assembly into Targeted Nanostructure and Functional Materials. Chemical Reviews. PMID 34709798 DOI: 10.1021/acs.chemrev.1c00712 |
0.235 |
|
2017 |
Ping J, Blum JE, Vishnubhotla R, Vrudhula A, Naylor CH, Gao Z, Saven JG, Johnson ATC. pH Sensing Properties of Flexible, Bias-Free Graphene Microelectrodes in Complex Fluids: From Phosphate Buffer Solution to Human Serum. Small (Weinheim An Der Bergstrasse, Germany). PMID 28612484 DOI: 10.1002/Smll.201700564 |
0.235 |
|
2012 |
Zhou R, Perez-Aguilar JM, Meng Q, Saven JG, Liu R. Opioid binding sites in human serum albumin. Anesthesia and Analgesia. 114: 122-8. PMID 22025496 DOI: 10.1213/Ane.0B013E318232E922 |
0.227 |
|
2021 |
Bulos JA, Guo R, Wang Z, DeLessio MA, Saven JG, Dmochowski IJ. Design of a Superpositively Charged Enzyme: Human Carbonic Anhydrase II Variant with Ferritin Encapsulation and Immobilization. Biochemistry. PMID 34757723 DOI: 10.1021/acs.biochem.1c00515 |
0.222 |
|
2021 |
Kim K, Kloxin CJ, Saven JG, Pochan DJ. Nanofibers Produced by Electrospinning of Ultrarigid Polymer Rods Made from Designed Peptide Bundlemers. Acs Applied Materials & Interfaces. PMID 34029045 DOI: 10.1021/acsami.1c04027 |
0.214 |
|
2023 |
Patkar SS, Tang Y, Bisram AM, Zhang T, Saven JG, Pochan DJ, Kiick KL. Genetic Fusion of Thermoresponsive Polypeptides with UCST-type Behavior Mediates 1D Assembly of Coiled-Coil Bundlemers. Angewandte Chemie (International Ed. in English). e202301331. PMID 36988077 DOI: 10.1002/anie.202301331 |
0.2 |
|
2021 |
Xi J, Yang N, Perez-Aguilar JM, Selling B, Grothusen JR, Lamichhane R, Saven JG, Liu R. Novel variants of engineered water soluble mu opioid receptors with extensive mutations and removal of cysteines. Proteins. PMID 34152652 DOI: 10.1002/prot.26160 |
0.199 |
|
2021 |
Sinha NJ, Kloxin CJ, Saven JG, Jensen GV, Kelman Z, Pochan DJ. Recombinant expression of computationally designed peptide-bundlemers in Escherichia coli. Journal of Biotechnology. PMID 33689866 DOI: 10.1016/j.jbiotec.2021.03.004 |
0.193 |
|
2001 |
Kono H, Zou J, Saven JG. Statistical theory of protein combinatorial libraries 2001 International Conference On Computational Nanoscience - Iccn 2001. 33-36. |
0.191 |
|
1997 |
Saven JG, Wolynes PG. Local signals in the energy landscape of collapsed helical proteins Physica D: Nonlinear Phenomena. 107: 330-337. |
0.19 |
|
2021 |
Wen C, Selling B, Yeliseev A, Xi J, Perez-Aguilar JM, Gao Z, Saven JG, Johnson ATC, Liu R. The C-terminus of the mu opioid receptor is critical in G-protein interaction as demonstrated by a novel graphene biosensor. Ieee Sensors Journal. 21: 5758-5762. PMID 33679256 DOI: 10.1109/jsen.2020.3043149 |
0.189 |
|
2024 |
Ning Y, Yang S, Yang DB, Cai YY, Xu J, Li R, Zhang Y, Kagan CR, Saven JG, Murray CB. Dynamic Nanocrystal Superlattices with Thermally Triggerable Lubricating Ligands. Journal of the American Chemical Society. PMID 38295018 DOI: 10.1021/jacs.3c10706 |
0.184 |
|
2009 |
Kang YK, Lee OS, Deria P, Kim SH, Park TH, Bonnell DA, Saven JG, Therien MJ. Helical wrapping of single-walled carbon nanotubes by water soluble poly(p-phenyleneethynylene). Nano Letters. 9: 1414-8. PMID 19281229 DOI: 10.1021/Nl8032334 |
0.18 |
|
2009 |
Kang YK, Lee OS, Deria P, Kim SH, Park TH, Bonnell DA, Saven JG, Therien MJ. Helical wrapping of single-walled carbon nanotubes by water soluble poly(p-phenyleneethynylene). Nano Letters. 9: 1414-8. PMID 19281229 DOI: 10.1021/Nl8032334 |
0.18 |
|
2014 |
Zhao X, Perez-Aguilar JM, Matsunaga F, Lerner M, Xi J, Selling B, Johnson AT, Saven JG, Liu R. Characterization of a computationally designed water-soluble human μ-opioid receptor variant using available structural information. Anesthesiology. 121: 866-75. PMID 24835677 DOI: 10.1097/Aln.0000000000000308 |
0.171 |
|
2014 |
Zhao X, Perez-Aguilar JM, Matsunaga F, Lerner M, Xi J, Selling B, Johnson AT, Saven JG, Liu R. Characterization of a computationally designed water-soluble human μ-opioid receptor variant using available structural information. Anesthesiology. 121: 866-75. PMID 24835677 DOI: 10.1097/Aln.0000000000000308 |
0.171 |
|
2005 |
Park S, Saven JG. Statistical and molecular dynamics studies of buried waters in globular proteins. Proteins. 60: 450-63. PMID 15937899 DOI: 10.1002/Prot.20511 |
0.169 |
|
2005 |
Park S, Saven JG. Statistical and molecular dynamics studies of buried waters in globular proteins. Proteins. 60: 450-63. PMID 15937899 DOI: 10.1002/Prot.20511 |
0.169 |
|
2023 |
Halaszynski NI, Saven JG, Pochan DJ, Kloxin CJ. Thermoresponsive Coiled-Coil Peptide-Polymer Grafts. Bioconjugate Chemistry. 34: 2001-2006. PMID 37874177 DOI: 10.1021/acs.bioconjchem.3c00367 |
0.167 |
|
2002 |
Kono H, Saven J. 3K1100 Comparison of Evolutionary and Computational Profiles of Proteins Seibutsu Butsuri. 42: S181. DOI: 10.2142/biophys.42.S181_1 |
0.165 |
|
2015 |
Ho J, Perez-Aguilar JM, Gao L, Saven JG, Matsunami H, Eckenhoff RG. Molecular recognition of ketamine by a subset of olfactory G protein-coupled receptors. Science Signaling. 8: ra33. PMID 25829447 DOI: 10.1126/Scisignal.2005912 |
0.156 |
|
2015 |
Ho J, Perez-Aguilar JM, Gao L, Saven JG, Matsunami H, Eckenhoff RG. Molecular recognition of ketamine by a subset of olfactory G protein-coupled receptors. Science Signaling. 8: ra33. PMID 25829447 DOI: 10.1126/Scisignal.2005912 |
0.156 |
|
2010 |
Park SJ, Kang SG, Fryd M, Saven JG, Park SJ. Highly tunable photoluminescent properties of amphiphilic conjugated block copolymers. Journal of the American Chemical Society. 132: 9931-3. PMID 20608674 DOI: 10.1021/Ja1004569 |
0.155 |
|
2010 |
Park SJ, Kang SG, Fryd M, Saven JG, Park SJ. Highly tunable photoluminescent properties of amphiphilic conjugated block copolymers. Journal of the American Chemical Society. 132: 9931-3. PMID 20608674 DOI: 10.1021/Ja1004569 |
0.155 |
|
2012 |
Perez-Aguilar JM, Saven JG, Liu R. Human μ Opioid Receptor Models with Evaluation of the Accuracy Using the Crystal Structure of the Murine μ Opioid Receptor. Journal of Anesthesia & Clinical Research. 3: 218. PMID 24527268 DOI: 10.4172/2155-6148.1000218 |
0.154 |
|
2012 |
Perez-Aguilar JM, Saven JG, Liu R. Human μ Opioid Receptor Models with Evaluation of the Accuracy Using the Crystal Structure of the Murine μ Opioid Receptor. Journal of Anesthesia & Clinical Research. 3: 218. PMID 24527268 DOI: 10.4172/2155-6148.1000218 |
0.154 |
|
2014 |
Lerner MB, Matsunaga F, Han GH, Hong SJ, Xi J, Crook A, Perez-Aguilar JM, Park YW, Saven JG, Liu R, Johnson AT. Scalable production of highly sensitive nanosensors based on graphene functionalized with a designed G protein-coupled receptor. Nano Letters. 14: 2709-14. PMID 24742304 DOI: 10.1021/Nl5006349 |
0.146 |
|
2014 |
Lerner MB, Matsunaga F, Han GH, Hong SJ, Xi J, Crook A, Perez-Aguilar JM, Park YW, Saven JG, Liu R, Johnson AT. Scalable production of highly sensitive nanosensors based on graphene functionalized with a designed G protein-coupled receptor. Nano Letters. 14: 2709-14. PMID 24742304 DOI: 10.1021/Nl5006349 |
0.146 |
|
2019 |
Liu R, Johnson ATC, Saven JG. Water Soluble G-protein Coupled Receptor Enabled Biosensors. Translational Perioperative and Pain Medicine. 6: 98-103. PMID 31828182 DOI: 10.31480/2330-4871/095 |
0.139 |
|
1996 |
Nelson JC, Schneider SD, Moore JS, Saven JG, Wolynes PG. Self-assembling helical phenylacetylene oligomers: Solid-phase synthesis and molecular mechanics calculations American Chemical Society, Polymer Preprints, Division of Polymer Chemistry. 37: 491-492. |
0.131 |
|
2006 |
Park S, Szep S, Boder ET, Van Duyne GD, Saven JG. An interior water is essential for maintaining the structure of FKBP12 Aiche Annual Meeting, Conference Proceedings. |
0.124 |
|
2015 |
Matsunaga F, Gao L, Huang XP, Saven JG, Roth BL, Liu R. Molecular interactions between general anesthetics and the 5HT2B receptor. Journal of Biomolecular Structure & Dynamics. 33: 211-8. PMID 24365264 DOI: 10.1080/07391102.2013.869483 |
0.097 |
|
2015 |
Matsunaga F, Gao L, Huang XP, Saven JG, Roth BL, Liu R. Molecular interactions between general anesthetics and the 5HT2B receptor. Journal of Biomolecular Structure & Dynamics. 33: 211-8. PMID 24365264 DOI: 10.1080/07391102.2013.869483 |
0.097 |
|
2015 |
Ouyang W, Saven JG, Subotnik JE. A Surface Hopping View of Electrochemistry: Non-Equilibrium Electronic Transport through an Ionic Solution with a Classical Master Equation Journal of Physical Chemistry C. 119: 20833-20844. DOI: 10.1021/Acs.Jpcc.5B06655 |
0.096 |
|
2011 |
Deria P, Glesner MG, Kang YK, Lee OS, Sinks L, Kim SH, Park TH, Bonnell DA, Saven JG, Therien MJ. Single-chain, helical wrapping of individualized, single-walled carbon nanotubes by ionic poly(aryleneethynylene)s: New compositions for photoinduced charge transfer reactions and photovoltaic applications Acs National Meeting Book of Abstracts. |
0.081 |
|
2006 |
Park S, Saven JG. Simulation of pH-dependent edge strand rearrangement in human β-2 microglobulin Aiche Annual Meeting, Conference Proceedings. |
0.07 |
|
1991 |
Saven JG, Skinner JL, Wright JR. Classical and quantum continuum percolation with hard core interactions The Journal of Chemical Physics. 94: 6153-6159. |
0.051 |
|
2015 |
Gao L, Liu W, Lee OS, Dmochowski IJ, Saven JG. Xe affinities of water-soluble cryptophanes and the role of confined water Chemical Science. 6: 7238-7248. DOI: 10.1039/c5sc02401c |
0.038 |
|
Hide low-probability matches. |