Joseph E. Wedekind, Ph. D.
Affiliations: | Biochemistry | University of Rochester, Rochester, NY |
Area:
x-ray crystallography, ncRNA structure, APOBEC3GWebsite:
http://www.urmc.rochester.edu/people/23504899-joseph-e-wedekindGoogle:
"Joseph Wedekind"Mean distance: 8.86
Cross-listing: Crystallography Tree
Parents
Sign in to add mentor| Ivan Rayment | grad student | 1995 | UW Madison |
| David Bruce McKay | post-doc | 1995-1999 | Stanford University Medical Center |
Children
Sign in to add trainee| Kefang Xie | grad student | 2005 | Rochester |
| Franz Gruswitz | grad student | 2006 | Rochester |
| Celeste MacElrevey | grad student | 2002-2007 | University of Rochester Medical Center |
| Geoffrey M. Lippa | grad student | 2007-2013 | University of Rochester Medical Center |
| Sai Shashank Chavali | grad student | 2016-2021 | Rochester |
BETA: Related publications
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Publications
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| Iannuzzelli JA, Bonn R, Hong AS, et al. (2024) Cyclic peptides targeting the SARS-CoV-2 programmed ribosomal frameshifting RNA from a multiplexed phage display library. Chemical Science |
| Kiliushik D, Goenner C, Law M, et al. (2024) Knotty is nice: Metabolite binding and RNA-mediated gene regulation by the preQ riboswitch family. The Journal of Biological Chemistry. 300: 107951 |
| Schroeder GM, Kiliushik D, Jenkins JL, et al. (2023) Structure and function analysis of a type III preQ-I riboswitch from E. coli reveals direct metabolite-sensing by the Shine-Dalgarno sequence. The Journal of Biological Chemistry. 105208 |
| Kretsch RC, Andersen ES, Bujnicki JM, et al. (2023) RNA target highlights in CASP15: Evaluation of predicted models by structure providers. Proteins |
| Schroeder GM, Akinyemi O, Malik J, et al. (2023) A riboswitch separated from its ribosome-binding site still regulates translation. Nucleic Acids Research |
| Schroeder GM, Cavender CE, Blau ME, et al. (2022) A small RNA that cooperatively senses two stacked metabolites in one pocket for gene control. Nature Communications. 13: 199 |
| Chavali SS, Mali SM, Bonn R, et al. (2021) Cyclic peptides with a distinct arginine-fork motif recognize the HIV trans-activation response RNA in vitro and in cells. The Journal of Biological Chemistry. 101390 |
| Srivastava Y, Bonn-Breach R, Chavali SS, et al. (2021) Affinity and Structural Analysis of the U1A RNA Recognition Motif with Engineered Methionines to Improve Experimental Phasing. Crystals. 11 |
| Chavali SS, Mali SM, Jenkins JL, et al. (2020) Co-crystal structures of HIV TAR RNA bound to lab-evolved proteins show key roles for arginine relevant to the design of cyclic peptide TAR inhibitors. The Journal of Biological Chemistry. 295: 16470-16486 |
| Chavali SS, Cavender CE, Mathews DH, et al. (2020) Arginine Forks Are a Widespread Motif to Recognize Phosphate Backbones and Guanine Nucleobases in the RNA Major Groove. Journal of the American Chemical Society |