William T. Barry, Ph.D. - Publications

Affiliations: 
2006 University of North Carolina, Chapel Hill, Chapel Hill, NC 
Area:
Biostatistics Biology, Bioinformatics Biology

57 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any innacuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Horton JK, Blitzblau RC, Yoo S, Geradts J, Chang Z, Baker JA, Georgiade GS, Chen W, Siamakpour-Reihani S, Wang C, Broadwater G, Groth J, Palta M, Dewhirst M, Barry WT, et al. Preoperative Single-Fraction Partial Breast Radiation Therapy: A Novel Phase 1, Dose-Escalation Protocol With Radiation Response Biomarkers. International Journal of Radiation Oncology, Biology, Physics. 92: 846-55. PMID 26104938 DOI: 10.1016/j.ijrobp.2015.03.007  0.4
2015 Greaney ML, Sprunck-Harrild K, Ruddy KJ, Ligibel J, Barry WT, Baker E, Meyer M, Emmons KM, Partridge AH. Study protocol for Young & Strong: a cluster randomized design to increase attention to unique issues faced by young women with newly diagnosed breast cancer. Bmc Public Health. 15: 37. PMID 25636332 DOI: 10.1186/s12889-015-1346-9  0.4
2014 Myers A, Barry WT, Hirsch MS, Matulonis U, Lee L. β-Catenin mutations in recurrent FIGO IA grade I endometrioid endometrial cancers. Gynecologic Oncology. 134: 426-7. PMID 24952365 DOI: 10.1016/j.ygyno.2014.06.010  0.4
2014 Sheppard VB, Faul LA, Luta G, Clapp JD, Yung RL, Wang JH, Kimmick G, Isaacs C, Tallarico M, Barry WT, Pitcher BN, Hudis C, Winer EP, Cohen HJ, Muss HB, et al. Frailty and adherence to adjuvant hormonal therapy in older women with breast cancer: CALGB protocol 369901. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 32: 2318-27. PMID 24934786 DOI: 10.1200/JCO.2013.51.7367  0.4
2014 Faul LA, Luta G, Sheppard V, Isaacs C, Cohen HJ, Muss HB, Yung R, Clapp JD, Winer E, Hudis C, Tallarico M, Wang J, Barry WT, Mandelblatt JS. Associations among survivorship care plans, experiences of survivorship care, and functioning in older breast cancer survivors: CALGB/Alliance 369901. Journal of Cancer Survivorship : Research and Practice. 8: 627-37. PMID 24917307 DOI: 10.1007/s11764-014-0371-5  0.4
2014 Stevenson M, Christensen J, Shoemaker D, Foster T, Barry WT, Tong BC, Wahidi M, Shofer S, Datto M, Ginsburg G, Crawford J, D'Amico T, Ready N. Tumor acquisition for biomarker research in lung cancer. Cancer Investigation. 32: 291-8. PMID 24810245 DOI: 10.3109/07357907.2014.911880  0.4
2014 Freedman RA, Vaz-Luis I, Barry WT, Lii H, Lin NU, Winer EP, Keating NL. Patterns of chemotherapy, toxicity, and short-term outcomes for older women receiving adjuvant trastuzumab-based therapy. Breast Cancer Research and Treatment. 145: 491-501. PMID 24756187 DOI: 10.1007/s10549-014-2968-9  0.4
2014 Haga SB, Barry WT, Mills R, Svetkey L, Suchindran S, Willard HF, Ginsburg GS. Impact of delivery models on understanding genomic risk for type 2 diabetes Public Health Genomics. 17: 95-104. PMID 24577154 DOI: 10.1159/000358413  0.4
2013 Mandelblatt JS, Makgoeng SB, Luta G, Hurria A, Kimmick G, Isaacs C, Tallarico M, Barry WT, Pitcher B, Winer EP, Hudis C, Cohen HJ, Muss HB. A planned, prospective comparison of short-term quality of life outcomes among older patients with breast cancer treated with standard chemotherapy in a randomized clinical trial vs. an observational study: CALGB #49907 and #369901. Journal of Geriatric Oncology. 4: 353-61. PMID 24472479 DOI: 10.1016/j.jgo.2013.05.004  0.4
2013 Liu JF, Kindelberger D, Doyle C, Lowe A, Barry WT, Matulonis UA. Predictive value of circulating tumor cells (CTCs) in newly-diagnosed and recurrent ovarian cancer patients. Gynecologic Oncology. 131: 352-6. PMID 23954902 DOI: 10.1016/j.ygyno.2013.08.006  0.4
2013 Brown JQ, Bydlon TM, Kennedy SA, Caldwell ML, Gallagher JE, Junker M, Wilke LG, Barry WT, Geradts J, Ramanujam N. Optical spectral surveillance of breast tissue landscapes for detection of residual disease in breast tumor margins. Plos One. 8: e69906. PMID 23922850 DOI: 10.1371/journal.pone.0069906  0.4
2013 Jones LW, Fels DR, West M, Allen JD, Broadwater G, Barry WT, Wilke LG, Masko E, Douglas PS, Dash RC, Povsic TJ, Peppercorn J, Marcom PK, Blackwell KL, Kimmick G, et al. Modulation of circulating angiogenic factors and tumor biology by aerobic training in breast cancer patients receiving neoadjuvant chemotherapy. Cancer Prevention Research (Philadelphia, Pa.). 6: 925-37. PMID 23842792 DOI: 10.1158/1940-6207.CAPR-12-0416  0.4
2013 Zhou YH, Barry WT, Wright FA. Empirical pathway analysis, without permutation. Biostatistics (Oxford, England). 14: 573-85. PMID 23428933 DOI: 10.1093/biostatistics/kxt004  0.4
2013 Haga SB, Barry WT, Mills R, Ginsburg GS, Svetkey L, Sullivan J, Willard HF. Public knowledge of and attitudes toward genetics and genetic testing Genetic Testing and Molecular Biomarkers. 17: 327-335. PMID 23406207 DOI: 10.1089/gtmb.2012.0350  0.4
2012 Bydlon TM, Barry WT, Kennedy SA, Brown JQ, Gallagher JE, Wilke LG, Geradts J, Ramanujam N. Advancing optical imaging for breast margin assessment: an analysis of excisional time, cautery, and patent blue dye on underlying sources of contrast. Plos One. 7: e51418. PMID 23251526 DOI: 10.1371/journal.pone.0051418  0.4
2012 Liao S, Desouki MM, Gaile DP, Shepherd L, Nowak NJ, Conroy J, Barry WT, Geradts J. Differential copy number aberrations in novel candidate genes associated with progression from in situ to invasive ductal carcinoma of the breast. Genes, Chromosomes & Cancer. 51: 1067-78. PMID 22887771 DOI: 10.1002/gcc.21991  0.4
2012 Secord AA, Teoh DK, Barry WT, Yu M, Broadwater G, Havrilesky LJ, Lee PS, Berchuck A, Lancaster J, Wenham RM. A phase I trial of dasatinib, an SRC-family kinase inhibitor, in combination with paclitaxel and carboplatin in patients with advanced or recurrent ovarian cancer. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 18: 5489-98. PMID 22837181 DOI: 10.1158/1078-0432.CCR-12-0507  0.4
2012 Mandelblatt JS, Faul LA, Luta G, Makgoeng SB, Isaacs C, Taylor K, Sheppard VB, Tallarico M, Barry WT, Cohen HJ. Patient and physician decision styles and breast cancer chemotherapy use in older women: Cancer and Leukemia Group B protocol 369901. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 30: 2609-14. PMID 22614985 DOI: 10.1200/JCO.2011.40.2909  0.4
2012 Albisinni S, De Nunzio C, Tubaro A, Barry WT, Banez LL, Freedland SJ. Greater percent-free testosterone is associated with high-grade prostate cancer in men undergoing prostate biopsy. Urology. 80: 162-7. PMID 22608797 DOI: 10.1016/j.urology.2012.01.068  0.4
2012 Kim MK, Osada T, Barry WT, Yang XY, Freedman JA, Tsamis KA, Datto M, Clary BM, Clay T, Morse MA, Febbo PG, Lyerly HK, Hsu DS. Characterization of an oxaliplatin sensitivity predictor in a preclinical murine model of colorectal cancer. Molecular Cancer Therapeutics. 11: 1500-9. PMID 22351745 DOI: 10.1158/1535-7163.MCT-11-0937  0.4
2012 Acharya CR, Hsu DS, Anders CK, Anguiano A, Salter KH, Walters KS, Redman RC, Tuchman SA, Moylan CA, Mukherjee S, Barry WT, Dressman HK, Ginsburg GS, Marcom KP, Garman KS, et al. Retraction: Acharya CR, et al. Gene expression signatures, clinicopathological features, and individualized therapy in breast cancer. JAMA. 2008;299(13):1574-1587. Jama. 307: 453. PMID 22228686 DOI: 10.1001/jama.2012.2  0.4
2012 Ibarra-Drendall C, Troch MM, Barry WT, Broadwater G, Petricoin EF, Wulfkuhle J, Liotta LA, Lem S, Baker JC, Ford AC, Wilke LG, Zalles C, Kuderer NM, Hoffman AW, Shivraj M, et al. Pilot and feasibility study: prospective proteomic profiling of mammary epithelial cells from high-risk women provides evidence of activation of pro-survival pathways. Breast Cancer Research and Treatment. 132: 487-98. PMID 21647677 DOI: 10.1007/s10549-011-1609-9  0.4
2012 Bydlon TM, Quincy Brown J, Kennedy SA, Gallagher JE, Caldwell M, Junker M, Wilke LG, Barry WT, Geradts J, Ramanujam N. Optical spectral imaging for breast margin assessment: A comprehensive assessment of sources of contrast Biomedical Optics, Biomed 2012. BW2B.4.  0.4
2011 Owzar K, Barry WT, Jung SH. Statistical considerations for analysis of microarray experiments. Clinical and Translational Science. 4: 466-77. PMID 22212230 DOI: 10.1111/j.1752-8062.2011.00309.x  0.4
2011 Chang JT, Gatza ML, Lucas JE, Barry WT, Vaughn P, Nevins JR. SIGNATURE: a workbench for gene expression signature analysis. Bmc Bioinformatics. 12: 443. PMID 22078435 DOI: 10.1186/1471-2105-12-443  0.4
2011 Meltzer EB, Barry WT, D'Amico TA, Davis RD, Lin SS, Onaitis MW, Morrison LD, Sporn TA, Steele MP, Noble PW. Bayesian probit regression model for the diagnosis of pulmonary fibrosis: proof-of-principle. Bmc Medical Genomics. 4: 70. PMID 21974901 DOI: 10.1186/1755-8794-4-70  0.4
2011 Freedman JA, Augustine CK, Selim AM, Holshausen KC, Wei Z, Tsamis KA, Hsu DS, Dressman HK, Barry WT, Tyler DS, Nevins JR. A methodology for utilization of predictive genomic signatures in FFPE samples. Bmc Medical Genomics. 4: 58. PMID 21745407 DOI: 10.1186/1755-8794-4-58  0.4
2011 Pilie PG, Ibarra-Drendall C, Troch MM, Broadwater G, Barry WT, Petricoin EF, Wulfkuhle JD, Liotta LA, Lem S, Baker JC, Stouder A, Ford AC, Wilke LG, Zalles CM, Mehta P, et al. Protein microarray analysis of mammary epithelial cells from obese and nonobese women at high risk for breast cancer: feasibility data. Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association For Cancer Research, Cosponsored by the American Society of Preventive Oncology. 20: 476-82. PMID 21242333 DOI: 10.1158/1055-9965.EPI-10-0847  0.4
2011 Teoh D, Ayeni TA, Rubatt JM, Adams DJ, Grace L, Starr MD, Barry WT, Berchuck A, Murphy SK, Secord AA. Dasatinib (BMS-35482) has synergistic activity with paclitaxel and carboplatin in ovarian cancer cells. Gynecologic Oncology. 121: 187-92. PMID 21208651 DOI: 10.1016/j.ygyno.2010.11.017  0.4
2010 Gatti DM, Barry WT, Nobel AB, Rusyn I, Wright FA. Heading down the wrong pathway: on the influence of correlation within gene sets. Bmc Genomics. 11: 574. PMID 20955544 DOI: 10.1186/1471-2164-11-574  0.4
2010 Geradts J, Bean SM, Bentley RC, Barry WT. The oncotype DX recurrence score is correlated with a composite index including routinely reported pathobiologic features. Cancer Investigation. 28: 969-77. PMID 20873988 DOI: 10.3109/07357907.2010.512600  0.4
2010 Wang X, Osada T, Wang Y, Yu L, Sakakura K, Katayama A, McCarthy JB, Brufsky A, Chivukula M, Khoury T, Hsu DS, Barry WT, Lyerly HK, Clay TM, Ferrone S. CSPG4 protein as a new target for the antibody-based immunotherapy of triple-negative breast cancer. Journal of the National Cancer Institute. 102: 1496-512. PMID 20852124 DOI: 10.1093/jnci/djq343  0.4
2010 Mandelblatt JS, Sheppard VB, Hurria A, Kimmick G, Isaacs C, Taylor KL, Kornblith AB, Noone AM, Luta G, Tallarico M, Barry WT, Hunegs L, Zon R, Naughton M, Winer E, et al. Breast cancer adjuvant chemotherapy decisions in older women: the role of patient preference and interactions with physicians. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 28: 3146-53. PMID 20516438 DOI: 10.1200/JCO.2009.24.3295  0.4
2010 Barry WT, Kernagis DN, Dressman HK, Griffis RJ, Hunter JD, Olson JA, Marks JR, Ginsburg GS, Marcom PK, Nevins JR, Geradts J, Datto MB. Intratumor heterogeneity and precision of microarray-based predictors of breast cancer biology and clinical outcome. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 28: 2198-206. PMID 20368555 DOI: 10.1200/JCO.2009.26.7245  0.4
2010 Gatza ML, Lucas JE, Barry WT, Kim JW, Wang Q, Crawford MD, Datto MB, Kelley M, Mathey-Prevot B, Potti A, Nevins JR. A pathway-based classification of human breast cancer. Proceedings of the National Academy of Sciences of the United States of America. 107: 6994-9. PMID 20335537 DOI: 10.1073/pnas.0912708107  0.4
2010 Shea PR, Virtaneva K, Kupko JJ, Porcella SF, Barry WT, Wright FA, Kobayashi SD, Carmody A, Ireland RM, Sturdevant DE, Ricklefs SM, Babar I, Johnson CA, Graham MR, Gardner DJ, et al. Interactome analysis of longitudinal pharyngeal infection of cynomolgus macaques by group A Streptococcus. Proceedings of the National Academy of Sciences of the United States of America. 107: 4693-8. PMID 20179180 DOI: 10.1073/pnas.0906384107  0.4
2010 Morse MA, Wei J, Hartman Z, Xia W, Ren XR, Lei G, Barry WT, Osada T, Hobeika AC, Peplinski S, Jiang H, Devi GR, Chen W, Spector N, Amalfitano A, et al. Synergism from combined immunologic and pharmacologic inhibition of HER2 in vivo. International Journal of Cancer. 126: 2893-903. PMID 19856307 DOI: 10.1002/ijc.24995  0.4
2010 Brown JQ, Bydlon TM, Richards LM, Yu B, Kennedy SA, Geradts J, Wilke LG, Junker MK, Gallagher J, Barry WT, Ramanujam N. Optical assesssment of tumor resection margins in the breast Ieee Journal On Selected Topics in Quantum Electronics. 16: 530-544. DOI: 10.1109/JSTQE.2009.2033257  0.4
2009 Ramanujam N, Brown J, Bydlon TM, Kennedy SA, Richards LM, Junker MK, Gallagher J, Barry WT, Wilke LG, Geradts J. Quantitative spectral reflectance imaging device for intraoperative breast tumor margin assessment. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2009: 6554-6. PMID 19964903 DOI: 10.1109/IEMBS.2009.5334501  0.4
2009 Friedman DR, Weinberg JB, Barry WT, Goodman BK, Volkheimer AD, Bond KM, Chen Y, Jiang N, Moore JO, Gockerman JP, Diehl LF, Decastro CM, Potti A, Nevins JR. A genomic approach to improve prognosis and predict therapeutic response in chronic lymphocytic leukemia. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 15: 6947-55. PMID 19861443 DOI: 10.1158/1078-0432.CCR-09-1132  0.4
2009 Wilke LG, Brown JQ, Bydlon TM, Kennedy SA, Richards LM, Junker MK, Gallagher J, Barry WT, Geradts J, Ramanujam N. Rapid noninvasive optical imaging of tissue composition in breast tumor margins. American Journal of Surgery. 198: 566-74. PMID 19800470 DOI: 10.1016/j.amjsurg.2009.06.018  0.4
2009 Vishwanath K, Yuan H, Barry WT, Dewhirst MW, Ramanujam N. Using optical spectroscopy to longitudinally monitor physiological changes within solid tumors. Neoplasia (New York, N.Y.). 11: 889-900. PMID 19724683 DOI: 10.1593/neo.09580  0.4
2009 Bottone FG, Barry WT. Postmarketing surveillance of serious adverse events associated with the use of rofecoxib from 1999-2002. Current Medical Research and Opinion. 25: 1535-50. PMID 19453292 DOI: 10.1185/03007990902953286  0.4
2009 Mendiratta P, Mostaghel E, Guinney J, Tewari AK, Porrello A, Barry WT, Nelson PS, Febbo PG. Genomic strategy for targeting therapy in castration-resistant prostate cancer. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 27: 2022-9. PMID 19289629 DOI: 10.1200/JCO.2008.17.2882  0.4
2009 Vasilatos SN, Broadwater G, Barry WT, Baker JC, Lem S, Dietze EC, Bean GR, Bryson AD, Pilie PG, Goldenberg V, Skaar D, Paisie C, Torres-Hernandez A, Grant TL, Wilke LG, et al. CpG island tumor suppressor promoter methylation in non-BRCA-associated early mammary carcinogenesis. Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association For Cancer Research, Cosponsored by the American Society of Preventive Oncology. 18: 901-14. PMID 19258476 DOI: 10.1158/1055-9965.EPI-08-0875  0.4
2009 Gatti DM, Sypa M, Rusyn I, Wright FA, Barry WT. SAFEGUI: resampling-based tests of categorical significance in gene expression data made easy. Bioinformatics (Oxford, England). 25: 541-2. PMID 19098030 DOI: 10.1093/bioinformatics/btn655  0.4
2008 Owzar K, Barry WT, Jung SH, Sohn I, George SL. Statistical challenges in preprocessing in microarray experiments in cancer. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 14: 5959-66. PMID 18829474 DOI: 10.1158/1078-0432.CCR-07-4532  0.4
2008 Acharya CR, Hsu DS, Anders CK, Anguiano A, Salter KH, Walters KS, Redman RC, Tuchman SA, Moylan CA, Mukherjee S, Barry WT, Dressman HK, Ginsburg GS, Marcom KP, Garman KS, et al. Gene expression signatures, clinicopathological features, and individualized therapy in breast cancer. Jama. 299: 1574-87. PMID 18387932 DOI: 10.1001/jama.299.13.1574  0.4
2008 Salter KH, Acharya CR, Walters KS, Redman R, Anguiano A, Garman KS, Anders CK, Mukherjee S, Dressman HK, Barry WT, Marcom KP, Olson J, Nevins JR, Potti A. An integrated approach to the prediction of chemotherapeutic response in patients with breast cancer. Plos One. 3: e1908. PMID 18382681 DOI: 10.1371/journal.pone.0001908  0.4
2008 Barry WT, Nobel AB, Wright FA. A statistical framework for testing functional categories in microarray data Annals of Applied Statistics. 2: 286-315. DOI: 10.1214/07-AOAS146  0.4
2007 Wright FA, Huang H, Guan X, Gamiel K, Jeffries C, Barry WT, de Villena FP, Sullivan PF, Wilhelmsen KC, Zou F. Simulating association studies: a data-based resampling method for candidate regions or whole genome scans. Bioinformatics (Oxford, England). 23: 2581-8. PMID 17785348 DOI: 10.1093/bioinformatics/btm386  0.4
2006 Graham MR, Virtaneva K, Porcella SF, Gardner DJ, Long RD, Welty DM, Barry WT, Johnson CA, Parkins LD, Wright FA, Musser JM. Analysis of the transcriptome of group A Streptococcus in mouse soft tissue infection. The American Journal of Pathology. 169: 927-42. PMID 16936267 DOI: 10.2353/ajpath.2006.060112  0.4
2005 Hester SD, Barry WT, Zou F, Wolf DC. Transcriptomic analysis of F344 rat nasal epithelium suggests that the lack of carcinogenic response to glutaraldehyde is due to its greater toxicity compared to formaldehyde. Toxicologic Pathology. 33: 415-24. PMID 16036858 DOI: 10.1080/01926230590953105  0.4
2005 Graham MR, Virtaneva K, Porcella SF, Barry WT, Gowen BB, Johnson CR, Wright FA, Musser JM. Group A Streptococcus transcriptome dynamics during growth in human blood reveals bacterial adaptive and survival strategies. The American Journal of Pathology. 166: 455-65. PMID 15681829 DOI: 10.1016/S0002-9440(10)62268-7  0.4
2005 Barry WT, Nobel AB, Wright FA. Significance analysis of functional categories in gene expression studies: a structured permutation approach. Bioinformatics (Oxford, England). 21: 1943-9. PMID 15647293 DOI: 10.1093/bioinformatics/bti260  0.4
2002 Warabi K, Richardson MD, Barry WT, Yamaguchi K, Roush ED, Nishimura K, Kwatra MM. Human substance P receptor undergoes agonist-dependent phosphorylation by G protein-coupled receptor kinase 5 in vitro. Febs Letters. 521: 140-4. PMID 12067742 DOI: 10.1016/S0014-5793(02)02858-2  0.4
2002 Barry WT, Boudignon-Proudhon C, Shock DD, McFadden A, Weiss JM, Sondek J, Parise LV. Molecular basis of CIB binding to the integrin alpha IIb cytoplasmic domain. The Journal of Biological Chemistry. 277: 28877-83. PMID 12023286 DOI: 10.1074/jbc.M202983200  0.4
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