Stephen R Baker, Ph. D - Publications

Affiliations: 
2015 Physics Wake Forest University, Winston-Salem, NC, United States 
Area:
Fibrin, Fibrinogen, Blood Clots, Coagulation, Atomic Force Microscopy

14/500 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Hur WS, Kawano T, Mwiza JMN, Paul DS, Lee RH, Clark EG, Bouck EG, Dutta A, Cai C, Baker SR, Guthold M, Mackman N, Mangin PH, Wolberg AS, Bergmeier W, et al. Mice expressing nonpolymerizable fibrinogen have reduced arterial and venous thrombosis with preserved hemostasis. Blood. PMID 37832029 DOI: 10.1182/blood.2023020805  0.515
2022 Asquith N, Duval C, Zhmurov A, Baker SR, McPherson HR, Domingues M, Connell SD, Barsegov V, Ariëns RAS. Fibrin protofibril packing and clot stability are enhanced by extended knob-hole interactions and catch-slip bonds. Blood Advances. PMID 35561308 DOI: 10.1182/bloodadvances.2022006977  0.308
2021 Daraei A, Pieters M, Baker SR, de Lange-Loots Z, Siniarski A, Litvinov RI, Veen CSB, de Maat MPM, Weisel JW, Ariëns RAS, Guthold M. Automated Fiber Diameter and Porosity Measurements of Plasma Clots in Scanning Electron Microscopy Images. Biomolecules. 11. PMID 34680169 DOI: 10.3390/biom11101536  0.638
2017 Li W, Sigley J, Baker SR, Helms CC, Kinney MT, Pieters M, Brubaker PH, Cubcciotti R, Guthold M. Nonuniform Internal Structure of Fibrin Fibers: Protein Density and Bond Density Strongly Decrease with Increasing Diameter. Biomed Research International. 2017: 6385628. PMID 29130043 DOI: 10.1155/2017/6385628  0.775
2017 Ward JW, Smith H, Zeidell A, Diemer P, Baker S, Lee H, Payne MM, Anthony JE, Guthold M, Jurchescu OD. Solution-Processed Organic and Halide Perovskite Transistors on Hydrophobic Surfaces. Acs Applied Materials & Interfaces. PMID 28485580 DOI: 10.1021/Acsami.7B03232  0.551
2016 Baker SR, Banerjee S, Bonin K, Guthold M. Determining the mechanical properties of electrospun poly-ε-caprolactone (PCL) nanofibers using AFM and a novel fiber anchoring technique. Materials Science & Engineering. C, Materials For Biological Applications. 59: 203-212. PMID 26652365 DOI: 10.1016/J.Msec.2015.09.102  0.68
2015 Brown AC, Baker SR, Douglas AM, Keating M, Alvarez-Elizondo MB, Botvinick EL, Guthold M, Barker TH. Molecular interference of fibrin's divalent polymerization mechanism enables modulation of multiscale material properties. Biomaterials. 49: 27-36. PMID 25725552 DOI: 10.1016/J.Biomaterials.2015.01.010  0.697
2014 Baker S, Carson-Brown A, Guthold M, Barker T. Fibrin Fibers: Blocking the B:B Knob-Pocket Interaction Biophysical Journal. 106. DOI: 10.1016/J.Bpj.2013.11.3399  0.733
2014 Li W, Sigley J, Baker S, Brubaker P, Pieters M, Helms C, Guthold M. The Effect of Disease and Exercise on Single Fibrin Fiber Mechanical Properties Biophysical Journal. 106: 390a. DOI: 10.1016/J.Bpj.2013.11.2204  0.788
2013 Li W, Sigley J, Baker S, Guthold M, Brubaker P, Pieters M. Effect of Disease and Acute Exercise on Single Fibrin Fiber Properties Biophysical Journal. 104. DOI: 10.1016/J.Bpj.2012.11.2836  0.784
2013 Baker S, Carson Brown A, Barker T, Guthold M. The Mechanical Properties of Modified Fibrin Fibers: Blocking the B-b Knob-Pocket Interaction Biophysical Journal. 104: 512a-513a. DOI: 10.1016/J.Bpj.2012.11.2831  0.751
2012 Baker S, Sigley J, Carlisle CR, Stitzel J, Berry J, Bonin K, Guthold M. The Mechanical Properties of Dry, Electrospun Fibrinogen Fibers. Materials Science & Engineering. C, Materials For Biological Applications. 32: 215-221. PMID 22563143 DOI: 10.1016/J.Msec.2011.10.021  0.71
2012 Baker S, Sigley J, Helms CC, Stitzel JD, Berry J, Bonin K, Guthold M. Corrigendum to “The mechanical properties of dry, electrospun fibrinogen fibers” [Mater. Sci. Eng. C 32/2 (2012) 215–221] Materials Science and Engineering: C. 32: 1016. DOI: 10.1016/J.Msec.2012.02.008  0.702
2011 Baker S. The Mechanical Properties of Electrospun Collagen/PCL Single Fibers and Fibrous Scaffolds Biophysical Journal. 100. DOI: 10.1016/J.Bpj.2010.12.1110  0.601
Low-probability matches (unlikely to be authored by this person)
2020 Macrae FL, Peacock-Young B, Bowman P, Baker SR, Quested S, Linton E, Hillmen P, Griffin M, Munir T, Payne D, McKinley C, Clarke D, Newton DJ, Hill A, Ariens RAS. Patients with paroxysmal nocturnal hemoglobinuria demonstrate a prothrombotic clotting phenotype which is improved by complement inhibition with eculizumab. American Journal of Hematology. PMID 32311169 DOI: 10.1002/Ajh.25841  0.257
2019 Baker SR, Zabczyk M, Macrae FL, Duval C, Undas A, Ariëns RAS. Recurrent venous thromboembolism patients form clots with lower elastic modulus than those with non-recurrent disease. Journal of Thrombosis and Haemostasis : Jth. PMID 30725502 DOI: 10.1111/Jth.14402  0.231
2018 Macrae FL, Duval C, Papareddy P, Baker SR, Yuldasheva N, Kearney KJ, McPherson HR, Asquith N, Konings J, Casini A, Degen JL, Connell SD, Philippou H, Wolberg AS, Herwald H, et al. A fibrin biofilm covers the blood clot and protects from microbial invasion. The Journal of Clinical Investigation. PMID 29723163 DOI: 10.1172/Jci98734  0.218
2021 Siniarski A, Baker SR, Duval C, Malinowski KP, Gajos G, Nessler J, Ariëns RAS. Quantitative analysis of clot density, fibrin fiber radius, and protofibril packing in acute phase myocardial infarction. Thrombosis Research. 205: 110-119. PMID 34298252 DOI: 10.1016/j.thromres.2021.06.024  0.194
2021 Xu RG, Gauer JS, Baker SR, Slater A, Martin EM, McPherson HR, Duval C, Manfield IW, Bonna AM, Watson S, Ariëns RAS. GPVI (Glycoprotein VI) Interaction With Fibrinogen Is Mediated by Avidity and the Fibrinogen αC-Region. Arteriosclerosis, Thrombosis, and Vascular Biology. ATVBAHA120315030. PMID 33472402 DOI: 10.1161/ATVBAHA.120.315030  0.122
2024 Nguyen Q, Nguyen YTP, Ha TT, Tran DTN, Voong PV, Chau V, Nguyen PLN, Le NTQ, Nguyen LPH, Nguyen TTN, Trinh TV, Carrique-Mas JJ, Baker S, Thwaites G, Rabaa MA, et al. Genomic insights unveil the plasmid transfer mechanism and epidemiology of hypervirulent Klebsiella pneumoniae in Vietnam. Nature Communications. 15: 4187. PMID 38760381 DOI: 10.1038/s41467-024-48206-3  0.12
2004 Baker SR. Call back or else. Emergency Radiology. 10: 233-4. PMID 15290465 DOI: 10.1007/s10140-003-0311-6  0.12
2021 McPherson HR, Duval C, Baker SR, Hindle MS, Cheah LT, Asquith NL, Domingues MM, Ridger VC, Connell SD, Naseem KM, Philippou H, Ajjan RA, Ariëns RA. Fibrinogen αC-subregions critically contribute blood clot fibre growth, mechanical stability, and resistance to fibrinolysis. Elife. 10. PMID 34633287 DOI: 10.7554/eLife.68761  0.119
2021 Duval C, Baranauskas A, Feller T, Ali M, Cheah LT, Yuldasheva NY, Baker SR, McPherson HR, Raslan Z, Bailey MA, Cubbon RM, Connell SD, Ajjan RA, Philippou H, Naseem KM, et al. Elimination of fibrin γ-chain cross-linking by FXIIIa increases pulmonary embolism arising from murine inferior vena cava thrombi. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34183396 DOI: 10.1073/pnas.2103226118  0.116
2005 Baker SR, Merkulov A. Grating on the curve. Emergency Radiology. 11: 129-31. PMID 16028315 DOI: 10.1007/s10140-004-0386-8  0.101
2021 Sridhar S, Forrest S, Warne B, Maes M, Baker S, Dougan G, Bartholdson Scott J. High-Content Imaging to Phenotype Antimicrobial Effects on Individual Bacteria at Scale. Msystems. 6. PMID 34006623 DOI: 10.1128/mSystems.00028-21  0.099
2021 Nguyen Q, Nguyen TTN, Pham P, Chau V, Nguyen LPH, Nguyen TD, Ha TT, Le NTQ, Vu DT, Baker S, Thwaites GE, Rabaa MA, Pham DT. Genomic insights into the circulation of pandemic fluoroquinolone-resistant extra-intestinal pathogenic ST1193 in Vietnam. Microbial Genomics. 7. PMID 34904942 DOI: 10.1099/mgen.0.000733  0.094
2015 Schreiber F, Kay S, Frankel G, Clare S, Goulding D, van de Vosse E, van Dissel JT, Strugnell R, Thwaites G, Kingsley RA, Dougan G, Baker S. The Hd, Hj, and Hz66 flagella variants of Salmonella enterica serovar Typhi modify host responses and cellular interactions. Scientific Reports. 5: 7947. PMID 25609312 DOI: 10.1038/srep07947  0.093
2011 Baker S, Holt KE, Clements AC, Karkey A, Arjyal A, Boni MF, Dongol S, Hammond N, Koirala S, Duy PT, Nga TV, Campbell JI, Dolecek C, Basnyat B, Dougan G, et al. Combined high-resolution genotyping and geospatial analysis reveals modes of endemic urban typhoid fever transmission. Open Biology. 1: 110008. PMID 22645647 DOI: 10.1098/Rsob.110008  0.092
2012 Dongol S, Thompson CN, Clare S, Nga TV, Duy PT, Karkey A, Arjyal A, Koirala S, Khatri NS, Maskey P, Poudel S, Jaiswal VK, Vaidya S, Dougan G, Farrar JJ, ... ... Baker S, et al. The microbiological and clinical characteristics of invasive salmonella in gallbladders from cholecystectomy patients in kathmandu, Nepal. Plos One. 7: e47342. PMID 23077595 DOI: 10.1371/journal.pone.0047342  0.092
2003 Pickard D, Wain J, Baker S, Line A, Chohan S, Fookes M, Barron A, Gaora PO, Chabalgoity JA, Thanky N, Scholes C, Thomson N, Quail M, Parkhill J, Dougan G. Composition, acquisition, and distribution of the Vi exopolysaccharide-encoding Salmonella enterica pathogenicity island SPI-7. Journal of Bacteriology. 185: 5055-65. PMID 12923078 DOI: 10.1128/JB.185.17.5055-5065.2003  0.089
2014 Dougan G, Baker S. Salmonella enterica serovar Typhi and the pathogenesis of typhoid fever. Annual Review of Microbiology. 68: 317-36. PMID 25208300 DOI: 10.1146/annurev-micro-091313-103739  0.085
2019 Crellen T, Turner P, Pol S, Baker S, Nguyen Thi Nguyen T, Stoesser N, Day NP, Turner C, Cooper BS. Transmission dynamics and control of multidrug-resistant in neonates in a developing country. Elife. 8. PMID 31793878 DOI: 10.7554/eLife.50468  0.082
2020 Diaz-Guevara P, Montaño LA, Duarte C, Zabaleta G, Maes M, Martinez Angarita JC, Thanh DP, León-Quevedo W, Castañeda-Orjuela C, Alvarez Alvarez CJ, Guerrero J, Moroni M, Campos J, Pérez E, Baker S. Surveillance of Salmonella enterica serovar  Typhi in Colombia, 2012-2015. Plos Neglected Tropical Diseases. 14: e0008040. PMID 32155148 DOI: 10.1371/journal.pntd.0008040  0.082
2003 Chan K, Baker S, Kim CC, Detweiler CS, Dougan G, Falkow S. Genomic comparison of Salmonella enterica serovars and Salmonella bongori by use of an S. enterica serovar typhimurium DNA microarray. Journal of Bacteriology. 185: 553-63. PMID 12511502 DOI: 10.1128/Jb.185.2.553-563.2003  0.082
2021 Will RC, Ramamurthy T, Sharma NC, Veeraraghavan B, Sangal L, Haldar P, Pragasam AK, Vasudevan K, Kumar D, Das B, Heinz E, Melnikov V, Baker S, Sangal V, Dougan G, et al. Spatiotemporal persistence of multiple, diverse clades and toxins of Corynebacterium diphtheriae. Nature Communications. 12: 1500. PMID 33686077 DOI: 10.1038/s41467-021-21870-5  0.081
2015 Carrique-Mas JJ, Tue NT, Bryant JE, Saylors K, Cuong NV, Hoa NT, An NN, Hien VB, Lao PV, Tu NC, Chuyen NK, Chuc NT, Tan DV, Duong HV, Toan TK, ... ... Baker S, et al. The baseline characteristics and interim analyses of the high-risk sentinel cohort of the Vietnam Initiative on Zoonotic InfectiONS (VIZIONS). Scientific Reports. 5: 17965. PMID 26659094 DOI: 10.1038/Srep17965  0.08
2022 Bloomfield S, Duong VT, Tuyen HT, Campbell JI, Thomson NR, Parkhill J, Le Phuc H, Chau TTH, Maskell DJ, Perron GG, Ngoc NM, Vi LL, Adriaenssens EM, Baker S, Mather AE. Mobility of antimicrobial resistance across serovars and disease presentations in non-typhoidal from animals and humans in Vietnam. Microbial Genomics. 8. PMID 35511231 DOI: 10.1099/mgen.0.000798  0.08
2008 Karkey A, Aryjal A, Basnyat B, Baker S. Kathmandu, Nepal: still an enteric fever capital of the world. Journal of Infection in Developing Countries. 2: 461-5. PMID 19745524 DOI: 10.3855/jidc.162  0.079
2005 Baker S, Sarwar Y, Aziz H, Haque A, Ali A, Dougan G, Wain J, Haque A. Detection of Vi-negative Salmonella enterica serovar typhi in the peripheral blood of patients with typhoid fever in the Faisalabad region of Pakistan. Journal of Clinical Microbiology. 43: 4418-25. PMID 16145086 DOI: 10.1128/JCM.43.9.4418-4425.2005  0.078
2023 Walker J, Chaguza C, Grubaugh ND, Carey M, Baker S, Khan K, Bogoch II, Pitzer VE. Assessing the global risk of typhoid outbreaks caused by extensively drug resistant Salmonella Typhi. Nature Communications. 14: 6502. PMID 37845201 DOI: 10.1038/s41467-023-42353-9  0.078
2014 Nhu NT, Lan NP, Campbell JI, Parry CM, Thompson C, Tuyen HT, Hoang NV, Tam PT, Le VM, Nga TV, Nhu Tdo H, Van Minh P, Nga NT, Thuy CT, Dung le T, ... ... Baker S, et al. Emergence of carbapenem-resistant Acinetobacter baumannii as the major cause of ventilator-associated pneumonia in intensive care unit patients at an infectious disease hospital in southern Vietnam. Journal of Medical Microbiology. 63: 1386-94. PMID 25038137 DOI: 10.1099/jmm.0.076646-0  0.078
2016 Van Voorhis WC, Adams JH, Adelfio R, Ahyong V, Akabas MH, Alano P, Alday A, Alemán Resto Y, Alsibaee A, Alzualde A, Andrews KT, Avery SV, Avery VM, Ayong L, Baker M, ... Baker S, et al. Open Source Drug Discovery with the Malaria Box Compound Collection for Neglected Diseases and Beyond. Plos Pathogens. 12: e1005763. PMID 27467575 DOI: 10.1371/Journal.Ppat.1005763  0.078
2018 Balasubramanian R, Im J, Lee JS, Jeon HJ, Mogeni OD, Kim JH, Rakotozandrindrainy R, Baker S, Marks F. The global burden and epidemiology of invasive non-typhoidal Salmonella infections. Human Vaccines & Immunotherapeutics. PMID 30081708 DOI: 10.1080/21645515.2018.1504717  0.077
2018 Chung The H, Baker S. Out of Asia: the independent rise and global spread of fluoroquinolone-resistant Shigella. Microbial Genomics. 4. PMID 29595412 DOI: 10.1099/mgen.0.000171  0.077
2023 Feng Y, Pan H, Zheng B, Li F, Teng L, Jiang Z, Feng M, Zhou X, Peng X, Xu X, Wang H, Wu B, Xiao Y, Baker S, Zhao G, et al. An integrated nationwide genomics study reveals transmission modes of typhoid fever in China. Mbio. e0133323. PMID 37800953 DOI: 10.1128/mbio.01333-23  0.077
2023 Chung The H, Pham P, Ha Thanh T, Phuong LVK, Yen NP, Le SH, Vu Thuy D, Chau TTH, Le Phuc H, Ngoc NM, Vi LL, Mather AE, Thwaites GE, Thomson NR, Baker S, et al. Multidrug resistance plasmids underlie clonal expansions and international spread of Salmonella enterica serotype 1,4,[5],12:i:- ST34 in Southeast Asia. Communications Biology. 6: 1007. PMID 37789208 DOI: 10.1038/s42003-023-05365-1  0.077
2019 Boinett CJ, Cain AK, Hawkey J, Do Hoang NT, Khanh NNT, Thanh DP, Dordel J, Campbell JI, Lan NPH, Mayho M, Langridge GC, Hadfield J, Chau NVV, Thwaites GE, Parkhill J, ... ... Baker S, et al. Clinical and laboratory-induced colistin-resistance mechanisms in Acinetobacter baumannii. Microbial Genomics. PMID 30720421 DOI: 10.1099/mgen.0.000246  0.077
2017 Munshi SU, Tran TTT, Vo TNT, Tabassum S, Sultana N, Nguyen TH, Jahan M, Le CN, Baker S, Rahman M. Molecular characterization of hepatitis B virus in Bangladesh reveals a highly recombinant population. Plos One. 12: e0188944. PMID 29216251 DOI: 10.1371/journal.pone.0188944  0.076
2016 Makendi C, Page AJ, Wren BW, Le Thi Phuong T, Clare S, Hale C, Goulding D, Klemm EJ, Pickard D, Okoro C, Hunt M, Thompson CN, Phu Huong Lan N, Tran Do Hoang N, Thwaites GE, ... ... Baker S, et al. A Phylogenetic and Phenotypic Analysis of Salmonella enterica Serovar Weltevreden, an Emerging Agent of Diarrheal Disease in Tropical Regions. Plos Neglected Tropical Diseases. 10: e0004446. PMID 26867150 DOI: 10.1371/journal.pntd.0004446  0.076
2020 Gallagher P, Baker S. Developing new therapeutic approaches for treating infections caused by multi-drug resistant Acinetobacter baumannii: Acinetobacter baumannii therapeutics. The Journal of Infection. PMID 33115656 DOI: 10.1016/j.jinf.2020.10.016  0.076
2013 Hoa NT, Chieu TT, Do Dung S, Long NT, Hieu TQ, Luc NT, Nhuong PT, Huong VT, Trinh DT, Wertheim HF, Van Kinh N, Campbell JI, Farrar J, Chau NV, Baker S, et al. Streptococcus suis and porcine reproductive and respiratory syndrome, Vietnam. Emerging Infectious Diseases. 19: 331-3. PMID 23343623 DOI: 10.3201/Eid1902.120470  0.076
2020 Baker S, Blohmke CJ, Maes M, Johnston PI, Darton TC. The Current Status of Enteric Fever Diagnostics and Implications for Disease Control. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 71: S64-S70. PMID 32725220 DOI: 10.1093/cid/ciaa503  0.076
2017 Saad NJ, Bowles CC, Grenfell BT, Basnyat B, Arjyal A, Dongol S, Karkey A, Baker S, Pitzer VE. The impact of migration and antimicrobial resistance on the transmission dynamics of typhoid fever in Kathmandu, Nepal: A mathematical modelling study. Plos Neglected Tropical Diseases. 11: e0005547. PMID 28475605 DOI: 10.1371/journal.pntd.0005547  0.075
2021 Chung The H, Bodhidatta L, Pham DT, Mason CJ, Ha Thanh T, Voong Vinh P, Turner P, Hem S, Dance DAB, Newton PN, Phetsouvanh R, Davong V, Thwaites GE, Thomson NR, Baker S, et al. Evolutionary histories and antimicrobial resistance in Shigella flexneri and Shigella sonnei in Southeast Asia. Communications Biology. 4: 353. PMID 33742111 DOI: 10.1038/s42003-021-01905-9  0.075
2014 Gunn JS, Marshall JM, Baker S, Dongol S, Charles RC, Ryan ET. Salmonella chronic carriage: epidemiology, diagnosis, and gallbladder persistence. Trends in Microbiology. 22: 648-55. PMID 25065707 DOI: 10.1016/j.tim.2014.06.007  0.075
2020 Thanh Duy P, Thieu NTV, Nguyen Thi Nguyen T, Ngoc Dan Thanh H, Dongol S, Karkey A, Carey M, Basnyat B, Dougan G, Rabaa MA, Baker S. Gallbladder carriage generates genetic variation and genome degradation in Salmonella Typhi. Plos Pathogens. 16: e1008998. PMID 33085725 DOI: 10.1371/journal.ppat.1008998  0.075
2015 Chung The H, Rabaa MA, Thanh DP, Ruekit S, Wangchuk S, Dorji T, Tshering KP, Nguyen TN, Vinh PV, Thanh TH, Minh CN, Turner P, Sar P, Thwaites G, Holt KE, ... ... Baker S, et al. Introduction and establishment of fluoroquinolone-resistant Shigella sonnei into Bhutan. Microbial Genomics. 1: e000042. PMID 28348825 DOI: 10.1099/mgen.0.000042  0.075
2011 Holt KE, Phan MD, Baker S, Duy PT, Nga TV, Nair S, Turner AK, Walsh C, Fanning S, Farrell-Ward S, Dutta S, Kariuki S, Weill FX, Parkhill J, Dougan G, et al. Emergence of a globally dominant IncHI1 plasmid type associated with multiple drug resistant typhoid. Plos Neglected Tropical Diseases. 5: e1245. PMID 21811646 DOI: 10.1371/journal.pntd.0001245  0.074
2008 Baker S, Holt K, van de Vosse E, Roumagnac P, Whitehead S, King E, Ewels P, Keniry A, Weill FX, Lightfoot D, van Dissel JT, Sanderson KE, Farrar J, Achtman M, Deloukas P, et al. High-throughput genotyping of Salmonella enterica serovar Typhi allowing geographical assignment of haplotypes and pathotypes within an urban District of Jakarta, Indonesia. Journal of Clinical Microbiology. 46: 1741-6. PMID 18322069 DOI: 10.1128/JCM.02249-07  0.074
2023 Baker SR, Halliday G, Ząbczyk M, Alkarithi G, Macrae FL, Undas A, Hunt BJ, Ariëns RAS. Plasma from patients with pulmonary embolism show aggregates that reduce after anticoagulation. Communications Medicine. 3: 12. PMID 36709220 DOI: 10.1038/s43856-023-00242-8  0.074
2019 Napolitani G, Kurupati P, Teng KWW, Gibani MM, Rei M, Aulicino A, Preciado-Llanes L, Wong MT, Becht E, Howson L, de Haas P, Salio M, Blohmke CJ, Olsen LR, Pinto DMS, ... ... Baker S, et al. Publisher Correction: Clonal analysis of Salmonella-specific effector T cells reveals serovar-specific and cross-reactive T cell responses. Nature Immunology. PMID 30862955 DOI: 10.1038/S41590-019-0357-6  0.074
2016 Hassan KA, Cain AK, Huang T, Liu Q, Elbourne LD, Boinett CJ, Brzoska AJ, Li L, Ostrowski M, Nhu NT, Nhu Tdo H, Baker S, Parkhill J, Paulsen IT. Fluorescence-Based Flow Sorting in Parallel with Transposon Insertion Site Sequencing Identifies Multidrug Efflux Systems in Acinetobacter baumannii. Mbio. 7. PMID 27601573 DOI: 10.1128/mBio.01200-16  0.072
2017 Darton TC, Jones C, Dongol S, Voysey M, Blohmke CJ, Shrestha R, Karkey A, Shakya M, Arjyal A, Waddington CS, Gibani M, Carter MJ, Basnyat B, Baker S, Pollard AJ. Assessment and Translation of the Antibody-in-Lymphocyte Supernatant (ALS) Assay to Improve the Diagnosis of Enteric Fever in Two Controlled Human Infection Models and an Endemic Area of Nepal. Frontiers in Microbiology. 8: 2031. PMID 29109704 DOI: 10.3389/fmicb.2017.02031  0.072
2013 Shanmugam VK, Tassi E, Schmidt MO, McNish S, Baker S, Attinger C, Wang H, Shara N, Wellstein A. Utility of a human-mouse xenograft model and in vivo near-infrared fluorescent imaging for studying wound healing. International Wound Journal. PMID 24373153 DOI: 10.1111/Iwj.12205  0.072
2016 Pham Thanh D, Thompson CN, Rabaa MA, Sona S, Sopheary S, Kumar V, Moore C, Tran Vu Thieu N, Wijedoru L, Holt KE, Wong V, Pickard D, Thwaites GE, Day N, Dougan G, ... ... Baker S, et al. The Molecular and Spatial Epidemiology of Typhoid Fever in Rural Cambodia. Plos Neglected Tropical Diseases. 10: e0004785. PMID 27331909 DOI: 10.1371/journal.pntd.0004785  0.071
2021 Tu NTK, Deng X, Hong NTT, Ny NTH, Phuc TM, Tam PTT, Han DA, Ha LTT, Thwaites G, Doorn HRV, Virtala AK, Delwart E, Baker S, Vapalahti O, Tan LV, et al. : High Prevalence and Possibly Chronic Shedding in Human Respiratory Tract, But No Zoonotic Transmission. Viruses. 13. PMID 33804837 DOI: 10.3390/v13040533  0.071
2014 Thompson CN, Anders KL, Nhi le TQ, Tuyen HT, Van Minh P, Tu le TP, Nhu Tdo H, Nhan NT, Ly TT, Duong VT, Vi LL, Van Thuy NT, Hieu NT, Van Chau NV, Campbell JI, ... ... Baker S, et al. A cohort study to define the age-specific incidence and risk factors of Shigella diarrhoeal infections in Vietnamese children: a study protocol. Bmc Public Health. 14: 1289. PMID 25514820 DOI: 10.1186/1471-2458-14-1289  0.07
2020 Jones NK, Rivett L, Sparkes D, Forrest S, Sridhar S, Young J, Pereira-Dias J, Cormie C, Gill H, Reynolds N, Wantoch M, Routledge M, Warne B, Levy J, Córdova Jiménez WD, ... ... Baker S, et al. Effective control of SARS-CoV-2 transmission between healthcare workers during a period of diminished community prevalence of COVID-19. Elife. 9. PMID 32558644 DOI: 10.7554/Elife.59391  0.07
2020 Dumont E, Oliver A, Ioannou C, Billiard J, Dennison J, Van Den Berg F, Yang S, Chandrasekaran V, Young G, Lahiry A, Starbuck D, Harrell A, Georgiou A, Hopchet N, Gillies A, ... Baker S, et al. A novel inhaled dry-powder formulation of ribavirin allows for efficient lung delivery in healthy participants and those with COPD in a Phase 1 study. Antimicrobial Agents and Chemotherapy. PMID 32071044 DOI: 10.1128/AAC.02267-19  0.07
2016 Duong VT, Vinh Phat V, Thanh Tuyen H, Dung TT, Trung PD, Minh PV, Thi Phuong Tu L, Campbell JI, Phuc HL, Ha TT, Ngoc NM, Huong NT, Thi Thanh Tam P, Huong DT, Xang NV, ... ... Baker S, et al. An evaluation of the Luminex xTAG Gastrointestinal Pathogen Panel assay for the detection of multiple diarrheal pathogens in fecal samples in Vietnam. Journal of Clinical Microbiology. PMID 26865681 DOI: 10.1128/JCM.03321-15  0.07
2008 Pickard D, Thomson NR, Baker S, Wain J, Pardo M, Goulding D, Hamlin N, Choudhary J, Threfall J, Dougan G. Molecular characterization of the Salmonella enterica serovar Typhi Vi-typing bacteriophage E1. Journal of Bacteriology. 190: 2580-7. PMID 18192390 DOI: 10.1128/JB.01654-07  0.07
2013 Baker S, Duy PT, Nga TV, Dung TT, Phat VV, Chau TT, Turner AK, Farrar J, Boni MF. Fitness benefits in fluoroquinolone-resistant Salmonella Typhi in the absence of antimicrobial pressure. Elife. 2: e01229. PMID 24327559 DOI: 10.7554/Elife.01229  0.069
2012 Vien le TM, Minh NN, Thuong TC, Khuong HD, Nga TV, Thompson C, Campbell JI, de Jong M, Farrar JJ, Schultsz C, van Doorn HR, Baker S. The co-selection of fluoroquinolone resistance genes in the gut flora of Vietnamese children. Plos One. 7: e42919. PMID 22937000 DOI: 10.1371/journal.pone.0042919  0.069
2015 Weinert LA, Chaudhuri RR, Wang J, Peters SE, Corander J, Jombart T, Baig A, Howell KJ, Vehkala M, Välimäki N, Harris D, Chieu TT, Van Vinh Chau N, Campbell J, Schultsz C, ... ... Baker S, et al. Genomic signatures of human and animal disease in the zoonotic pathogen Streptococcus suis. Nature Communications. 6: 6740. PMID 25824154 DOI: 10.1038/Ncomms7740  0.069
2016 Phan MVT, Anh PH, Cuong NV, Munnink BBO, van der Hoek L, My PT, Tri TN, Bryant JE, Baker S, Thwaites G, Woolhouse M, Kellam P, Rabaa MA, Cotten M. Unbiased whole-genome deep sequencing of human and porcine stool samples reveals circulation of multiple groups of rotaviruses and a putative zoonotic infection. Virus Evolution. 2: vew027. PMID 28748110 DOI: 10.1093/Ve/Vew027  0.069
2017 Day JN, Qihui S, Thanh LT, Trieu PH, Van AD, Thu NH, Chau TTH, Lan NPH, Chau NVV, Ashton PM, Thwaites GE, Boni MF, Wolbers M, Nagarajan N, Tan PBO, ... Baker S, et al. Comparative genomics of Cryptococcus neoformans var. grubii associated with meningitis in HIV infected and uninfected patients in Vietnam. Plos Neglected Tropical Diseases. 11: e0005628. PMID 28614360 DOI: 10.1371/Journal.Pntd.0005628  0.069
2014 Charles RC, Liang L, Khanam F, Sayeed MA, Hung C, Leung DT, Baker S, Ludwig A, Harris JB, Larocque RC, Calderwood SB, Qadri F, Felgner PL, Ryan ET. Immunoproteomic analysis of antibody in lymphocyte supernatant in patients with typhoid fever in Bangladesh. Clinical and Vaccine Immunology : Cvi. 21: 280-5. PMID 24371257 DOI: 10.1128/Cvi.00661-13  0.069
2020 Nguyen NT, Phuong Yen NT, Ky Thien NV, Van Cuong N, Kiet BT, Campbell J, Thwaites G, Baker S, Geskus RB, Carrique-Mas J. A novel method for measuring phenotypic colistin resistance in populations from chicken flocks. Applied and Environmental Microbiology. PMID 33355096 DOI: 10.1128/AEM.02597-20  0.068
2020 Thi Kha Tu N, Thi Thu Hong N, Thi Han Ny N, My Phuc T, Thi Thanh Tam P, Doorn HRV, Dang Trung Nghia H, Thao Huong D, An Han D, Thi Thu Ha L, Deng X, Thwaites G, Delwart E, Virtala AK, Vapalahti O, ... Baker S, et al. The Virome of Acute Respiratory Diseases in Individuals at Risk of Zoonotic Infections. Viruses. 12. PMID 32872469 DOI: 10.3390/v12090960  0.068
2015 Rabaa MA, Tue NT, Phuc TM, Carrique-Mas J, Saylors K, Cotten M, Bryant JE, Nghia HD, Cuong NV, Pham HA, Berto A, Phat VV, Dung TT, Bao LH, Hoa NT, ... ... Baker S, et al. The Vietnam Initiative on Zoonotic Infections (VIZIONS): A Strategic Approach to Studying Emerging Zoonotic Infectious Diseases. Ecohealth. PMID 26403795 DOI: 10.1007/S10393-015-1061-0  0.068
2015 Wyres KL, Gorrie C, Edwards DJ, Wertheim HF, Hsu LY, Van Kinh N, Zadoks R, Baker S, Holt KE. Extensive Capsule Locus Variation and Large-Scale Genomic Recombination within the Klebsiella pneumoniae Clonal Group 258. Genome Biology and Evolution. 7: 1267-79. PMID 25861820 DOI: 10.1093/Gbe/Evv062  0.068
2020 da Silva KE, Thi Nguyen TN, Boinett CJ, Baker S, Simionatto S. Molecular and epidemiological surveillance of polymyxin-resistant Klebsiella pneumoniae strains isolated from Brazil with multiple mgrB gene mutations. International Journal of Medical Microbiology : Ijmm. 310: 151448. PMID 33092694 DOI: 10.1016/j.ijmm.2020.151448  0.068
2021 Guevara PD, Maes M, Thanh DP, Duarte C, Rodriguez EC, Montaño LA, Dan THN, Nguyen TNT, Carey ME, Campos J, Chinen I, Perez E, Baker S. A genomic snapshot of Salmonella enterica serovar Typhi in Colombia. Plos Neglected Tropical Diseases. 15: e0009755. PMID 34529660 DOI: 10.1371/journal.pntd.0009755  0.068
2018 Darton TC, Thanh Tuyen H, Chung The H, Newton PN, Dance DAB, Phetsouvanh R, Davong V, Campbell JI, Minh Hoang NV, Thwaites GE, Parry CM, Pham Thanh D, Baker S. Azithromycin resistance in Shigella spp. in Southeast Asia. Antimicrobial Agents and Chemotherapy. PMID 29378707 DOI: 10.1128/AAC.01748-17  0.067
2018 Mather AE, Phuong TLT, Gao Y, Clare S, Mukhopadhyay S, Goulding DA, Hoang NTD, Tuyen HT, Lan NPH, Thompson CN, Trang NHT, Carrique-Mas J, Tue NT, Campbell JI, Rabaa MA, ... ... Baker S, et al. New Variant of Multidrug-Resistant Serovar Typhimurium Associated with Invasive Disease in Immunocompromised Patients in Vietnam. Mbio. 9. PMID 30181247 DOI: 10.1128/Mbio.01056-18  0.067
2010 Karkey A, Arjyal A, Anders KL, Boni MF, Dongol S, Koirala S, My PV, Nga TV, Clements AC, Holt KE, Duy PT, Day JN, Campbell JI, Dougan G, Dolecek C, ... ... Baker S, et al. The burden and characteristics of enteric fever at a healthcare facility in a densely populated area of Kathmandu. Plos One. 5: e13988. PMID 21085575 DOI: 10.1371/Journal.Pone.0013988  0.067
2017 Zellweger RM, Carrique-Mas J, Limmathurotsakul D, Day NPJ, Thwaites GE, Baker S. A current perspective on antimicrobial resistance in Southeast Asia. The Journal of Antimicrobial Chemotherapy. PMID 28961709 DOI: 10.1093/jac/dkx260  0.067
2021 Chung The H, Nguyen Ngoc Minh C, Tran Thi Hong C, Nguyen Thi Nguyen T, Pike LJ, Zellmer C, Pham Duc T, Tran TA, Ha Thanh T, Van MP, Thwaites GE, Rabaa MA, Hall LJ, Baker S. Exploring the Genomic Diversity and Antimicrobial Susceptibility of Bifidobacterium pseudocatenulatum in a Vietnamese Population. Microbiology Spectrum. e0052621. PMID 34523984 DOI: 10.1128/Spectrum.00526-21  0.067
2022 Duong VT, Tu LTP, Tuyen HT, Nhi LTQ, Campbell JI, Van Minh P, Le Phuc H, Chau TTH, Ngoc NM, Vi LL, Jenkins C, Okeke I, Higginson E, Baker S. Correction: Novel multiplex real-time PCR assays reveal a high prevalence of diarrhoeagenic Escherichia coli pathotypes in healthy and diarrhoeal children in the south of Vietnam. Bmc Microbiology. 22: 178. PMID 35836117 DOI: 10.1186/s12866-022-02567-1  0.067
2020 Wyres KL, Nguyen TNT, Lam MMC, Judd LM, van Vinh Chau N, Dance DAB, Ip M, Karkey A, Ling CL, Miliya T, Newton PN, Lan NPH, Sengduangphachanh A, Turner P, Veeraraghavan B, ... ... Baker S, et al. Genomic surveillance for hypervirulence and multi-drug resistance in invasive Klebsiella pneumoniae from South and Southeast Asia. Genome Medicine. 12: 11. PMID 31948471 DOI: 10.1186/s13073-019-0706-y  0.067
2022 Pfavayi LT, Burchmore R, Sibanda EN, Baker S, Woolhouse M, Mduluza T, Mutapi F. The Identification and Characterization of Immunoreactive Fungal Proteins Recognized by Sera from Zimbabweans Sensitized to Fungi. International Archives of Allergy and Immunology. 1-10. PMID 35584611 DOI: 10.1159/000524771  0.066
2020 Duong VT, Tu LTP, Tuyen HT, Nhi LTQ, Campbell JI, Van Minh P, Le Phuc H, Chau TTH, Ngoc NM, Vi LL, Jenkins C, Okeke I, Higginson E, Baker S. Novel multiplex real-time PCR assays reveal a high prevalence of diarrhoeagenic Escherichia coli pathotypes in healthy and diarrhoeal children in the south of Vietnam. Bmc Microbiology. 20: 192. PMID 32620076 DOI: 10.1186/s12866-020-01878-5  0.066
2006 Anjum MF, Marooney C, Fookes M, Baker S, Dougan G, Ivens A, Woodward MJ. Identification of core and variable components of the Salmonella enterica subspecies I genome by microarray. Infection and Immunity. 73: 7894-905. PMID 16299280 DOI: 10.1128/IAI.73.12.7894-7905.2005  0.066
2020 Nhung NT, Yen NTP, Cuong N, Kiet BT, Hien VB, Campbell J, Thwaites G, Baker S, Geskus R, Ashton P, Carrique-Mas J. Carriage of the zoonotic organism Streptococcus suis in chicken flocks in Vietnam. Zoonoses and Public Health. PMID 32342661 DOI: 10.1111/zph.12711  0.065
2006 Irwin RS, Ownbey R, Cagle PT, Baker S, Fraire AE. Interpreting the histopathology of chronic cough: a prospective, controlled, comparative study. Chest. 130: 362-70. PMID 16899833 DOI: 10.1378/chest.130.2.362  0.065
2023 Hamilton WL, Coscione S, Maes M, Warne B, Pike LJ, Khokhar FA, Blane B, Brown NM, Gouliouris T, Dougan G, Török ME, Baker S. The clinical, genomic, and microbiological profile of invasive multi-drug resistant in a major teaching hospital in the United Kingdom. Microbial Genomics. 9. PMID 37902454 DOI: 10.1099/mgen.0.001122  0.065
2019 Chung The H, Boinett C, Pham Thanh D, Jenkins C, Weill FX, Howden BP, Valcanis M, De Lappe N, Cormican M, Wangchuk S, Bodhidatta L, Mason CJ, Nguyen TNT, Ha Thanh T, Voong VP, ... ... Baker S, et al. Dissecting the molecular evolution of fluoroquinolone-resistant Shigella sonnei. Nature Communications. 10: 4828. PMID 31645551 DOI: 10.1038/s41467-019-12823-0  0.065
2016 Schultz MB, Pham Thanh D, Tran Do Hoan N, Wick RR, Ingle DJ, Hawkey J, Edwards DJ, Kenyon JJ, Phu Huong Lan N, Campbell JI, Thwaites G, Thi Khanh Nhu N, Hall RM, Fournier-Level A, Baker S, et al. Repeated local emergence of carbapenem-resistant Acinetobacter baumannii in a single hospital ward. Microbial Genomics. 2: e000050. PMID 28348846 DOI: 10.1099/mgen.0.000050  0.064
2012 Baker SR, Partyka L. Relative importance of metaphor in radiology versus other medical specialties. Radiographics : a Review Publication of the Radiological Society of North America, Inc. 32: 235-40. PMID 22236904 DOI: 10.1148/rg.321115721  0.064
2004 Liu M, Gingery M, Doulatov SR, Liu Y, Hodes A, Baker S, Davis P, Simmonds M, Churcher C, Mungall K, Quail MA, Preston A, Harvill ET, Maskell DJ, Eiserling FA, et al. Genomic and genetic analysis of Bordetella bacteriophages encoding reverse transcriptase-mediated tropism-switching cassettes. Journal of Bacteriology. 186: 1503-17. PMID 14973019 DOI: 10.1128/Jb.186.5.1503-1517.2004  0.064
2020 Rivett L, Sridhar S, Sparkes D, Routledge M, Jones NK, Forrest S, Young J, Pereira-Dias J, Hamilton WL, Ferris M, Torok ME, Meredith L, Curran MD, Fuller S, ... ... Baker S, et al. Screening of healthcare workers for SARS-CoV-2 highlights the role of asymptomatic carriage in COVID-19 transmission. Elife. 9. PMID 32392129 DOI: 10.7554/Elife.58728  0.064
2021 Dongol S, Kayastha G, Maharjan N, Pyatha S, K C R, Thwaites L, Basnyat B, Baker S, Karkey A. Epidemiology, etiology, and diagnosis of health care acquired pneumonia including ventilator-associated pneumonia in Nepal. Plos One. 16: e0259634. PMID 34788314 DOI: 10.1371/journal.pone.0259634  0.064
2018 Baker S, Thomson N, Weill FX, Holt KE. Genomic insights into the emergence and spread of antimicrobial-resistant bacterial pathogens. Science (New York, N.Y.). 360: 733-738. PMID 29773743 DOI: 10.1126/science.aar3777  0.064
2017 Watson CH, Coriakula J, Ngoc DTT, Flasche S, Kucharski AJ, Lau CL, Thieu NTV, le Polain de Waroux O, Rawalai K, Van TT, Taufa M, Baker S, Nilles EJ, Kama M, Edmunds WJ. Social mixing in Fiji: Who-eats-with-whom contact patterns and the implications of age and ethnic heterogeneity for disease dynamics in the Pacific Islands. Plos One. 12: e0186911. PMID 29211731 DOI: 10.1371/journal.pone.0186911  0.063
2020 Andrews JR, Yu AT, Saha S, Shakya J, Aiemjoy K, Horng L, Qamar F, Garrett D, Baker S, Saha S, Luby SP. Environmental Surveillance as a Tool for Identifying High-risk Settings for Typhoid Transmission. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 71: S71-S78. PMID 32725227 DOI: 10.1093/cid/ciaa513  0.063
2022 Pereira-Dias J, Nguyen Ngoc Minh C, Tran Thi Hong C, Nguyen Thi Nguyen T, Ha Thanh T, Zellmer C, Chung The H, Pike L, Higginson EE, Baker S. The Gut Microbiome of Healthy Vietnamese Adults and Children Is a Major Reservoir for Resistance Genes Against Critical Antimicrobials. The Journal of Infectious Diseases. 224: S840-S847. PMID 34374428 DOI: 10.1093/infdis/jiab398  0.063
2012 Holt KE, Baker S, Weill FX, Holmes EC, Kitchen A, Yu J, Sangal V, Brown DJ, Coia JE, Kim DW, Choi SY, Kim SH, da Silveira WD, Pickard DJ, Farrar JJ, et al. Shigella sonnei genome sequencing and phylogenetic analysis indicate recent global dissemination from Europe. Nature Genetics. 44: 1056-9. PMID 22863732 DOI: 10.1038/Ng.2369  0.063
2015 Connor TR, Barker CR, Baker KS, Weill FX, Talukder KA, Smith AM, Baker S, Gouali M, Pham Thanh D, Jahan Azmi I, Dias da Silveira W, Semmler T, Wieler LH, Jenkins C, Cravioto A, et al. Species-wide whole genome sequencing reveals historical global spread and recent local persistence in Shigella flexneri. Elife. 4. PMID 26238191 DOI: 10.7554/eLife.07335  0.063
2017 Watson CH, Baker S, Lau CL, Rawalai K, Taufa M, Coriakula J, Thieu NTV, Van TT, Ngoc DTT, Hens N, Lowry J, de Alwis R, Cano J, Jenkins K, Mulholland EK, et al. A cross-sectional seroepidemiological survey of typhoid fever in Fiji. Plos Neglected Tropical Diseases. 11: e0005786. PMID 28727726 DOI: 10.1371/Journal.Pntd.0005786  0.063
2020 Thuy Duong V, Chung The H, Do Hoang Nhu T, Thanh Tuyen H, Campbell JI, Van Minh P, Le Phuc H, Thi Hong Chau T, Minh Ngoc N, Lan Vi L, Mather AE, Baker S. Genomic serotyping, clinical manifestations, and antimicrobial resistance of non-typhoidal gastroenteritis in hospitalized children in Ho Chi Minh City, Vietnam. Journal of Clinical Microbiology. PMID 32907994 DOI: 10.1128/JCM.01465-20  0.063
2013 Dung TT, Phat VV, Nga TV, My PV, Duy PT, Campbell JI, Thuy CT, Hoang NV, Van Minh P, Le Phuc H, Tuyet PT, Vinh H, Kien DT, Huy Hle A, Vinh NT, ... ... Baker S, et al. The validation and utility of a quantitative one-step multiplex RT real-time PCR targeting rotavirus A and norovirus. Journal of Virological Methods. 187: 138-43. PMID 23046990 DOI: 10.1016/j.jviromet.2012.09.021  0.063
2021 Sridhar S, Forrest S, Pickard D, Cormie C, Lees EA, Thomson NR, Dougan G, Baker S. Inhibitory Concentrations of Ciprofloxacin Induce an Adaptive Response Promoting the Intracellular Survival of Salmonella enterica Serovar Typhimurium. Mbio. e0109321. PMID 34154399 DOI: 10.1128/mBio.01093-21  0.063
2016 Al-Emran HM, Eibach D, Krumkamp R, Ali M, Baker S, Biggs HM, Bjerregaard-Andersen M, Breiman RF, Clemens JD, Crump JA, Cruz Espinoza LM, Deerin J, Dekker DM, Gassama Sow A, Hertz JT, et al. A Multicountry Molecular Analysis of Salmonella enterica Serovar Typhi With Reduced Susceptibility to Ciprofloxacin in Sub-Saharan Africa. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 62: S42-6. PMID 26933020 DOI: 10.1093/cid/civ788  0.063
2019 Tu NTK, Tue NT, Vapalahti O, Virtala AK, Van Tan L, Rabaa MA, Carrique-Mas J, Thwaites GE, Baker S. Occupational Animal Contact in Southern and Central Vietnam. Ecohealth. PMID 31720941 DOI: 10.1007/s10393-019-01444-0  0.063
2016 Lu L, Van Dung N, Bryant JE, Carrique-Mas J, Van Cuong N, Anh PH, Rabaa MA, Baker S, Simmonds P, Woolhouse ME. Evolution and phylogeographic dissemination of endemic porcine picornaviruses in Vietnam. Virus Evolution. 2: vew001. PMID 27774295 DOI: 10.1093/Ve/Vew001  0.063
2019 Robertson G, Perry M, Vinh PV, Ngoc DTT, Thanh TPT, My PT, Thao HD, Rabaa M, Baker S, Woolhouse M. Pig Exposure and Health Outcomes in Hospitalized Infectious Disease Patients in Vietnam. Ecohealth. PMID 31845120 DOI: 10.1007/s10393-019-01460-0  0.063
2022 Qiu S, Liu K, Yang C, Xiang Y, Min K, Zhu K, Liu H, Du X, Yang M, Wang L, Sun Y, Zhou H, Mahe M, Zhao J, Li S, ... ... Baker S, et al. A Shigella sonnei clone with extensive drug resistance associated with waterborne outbreaks in China. Nature Communications. 13: 7365. PMID 36450777 DOI: 10.1038/s41467-022-35136-1  0.063
2021 Devaraj A, González JF, Eichar B, Thilliez G, Kingsley RA, Baker S, Allard MW, Bakaletz LO, Gunn JS, Goodman SD. Enhanced biofilm and extracellular matrix production by chronic carriage versus acute isolates of Salmonella Typhi. Plos Pathogens. 17: e1009209. PMID 33465146 DOI: 10.1371/journal.ppat.1009209  0.062
2020 Thanh Duy P, Thi Nguyen TN, Vu Thuy D, Chung The H, Alcock F, Boinett C, Dan Thanh HN, Thanh Tuyen H, Thwaites GE, Rabaa MA, Baker S. Commensal Escherichia coli are a reservoir for the transfer of XDR plasmids into epidemic fluoroquinolone-resistant Shigella sonnei. Nature Microbiology. PMID 31959970 DOI: 10.1038/s41564-019-0645-9  0.062
2017 Thompsom CN, Karkey A, Dongol S, Ariyal A, Wolbers M, Darton T, Farrar JJ, Thwaites GE, Dolecek C, Basnyat B, Baker S. Treatment response in enteric fever in an era of increasing antimicrobial resistance: an individual patient data analysis of 2,092 participants enrolled into four randomised controlled trials in Nepal. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 28329181 DOI: 10.1093/cid/cix185  0.062
2020 Tuan-Anh T, Tuyen HT, Minh Chau NN, Toan ND, Triet TH, Triet LM, Trang NHT, To NTN, Bartholdson Scott J, The HC, Thanh DP, Clapham H, Baker S. Pathogenic Possess Elevated Growth Rates under Exposure to Sub-Inhibitory Concentrations of Azithromycin. Antibiotics (Basel, Switzerland). 9. PMID 33114588 DOI: 10.3390/antibiotics9110735  0.062
2020 Carey ME, MacWright WR, Im J, Meiring JE, Gibani MM, Park SE, Longley A, Jeon HJ, Hemlock C, Yu AT, Soura A, Aiemjoy K, Owusu-Dabo E, Terferi M, Islam S, ... ... Baker S, et al. The Surveillance for Enteric Fever in Asia Project (SEAP), Severe Typhoid Fever Surveillance in Africa (SETA), Surveillance of Enteric Fever in India (SEFI), and Strategic Typhoid Alliance Across Africa and Asia (STRATAA) Population-based Enteric Fever Studies: A Review of Methodological Similarities and Differences. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 71: S102-S110. PMID 32725221 DOI: 10.1093/cid/ciaa367  0.062
2015 Thompson CN, Duy PT, Baker S. The Rising Dominance of Shigella sonnei: An Intercontinental Shift in the Etiology of Bacillary Dysentery. Plos Neglected Tropical Diseases. 9: e0003708. PMID 26068698 DOI: 10.1371/journal.pntd.0003708  0.062
2022 Nguyen Thi Nguyen T, Parry CM, Campbell JI, Vinh PV, Kneen R, Baker S. Endemic erythromycin resistant in Vietnam in the 1990s. Microbial Genomics. 8. PMID 36259695 DOI: 10.1099/mgen.0.000861  0.062
2011 Holt KE, Dolecek C, Chau TT, Duy PT, La TT, Hoang NV, Nga TV, Campbell JI, Manh BH, Vinh Chau NV, Hien TT, Farrar J, Dougan G, Baker S. Temporal fluctuation of multidrug resistant salmonella typhi haplotypes in the mekong river delta region of Vietnam. Plos Neglected Tropical Diseases. 5: e929. PMID 21245916 DOI: 10.1371/journal.pntd.0000929  0.062
2014 My PV, Rabaa MA, Donato C, Cowley D, Phat VV, Dung TT, Anh PH, Vinh H, Bryant JE, Kellam P, Thwaites G, Woolhouse ME, Kirkwood CD, Baker S. Novel porcine-like human G26P[19] rotavirus identified in hospitalized paediatric diarrhoea patients in Ho Chi Minh City, Vietnam. The Journal of General Virology. 95: 2727-33. PMID 25121549 DOI: 10.1099/Vir.0.068403-0  0.061
2013 Repasy T, Lee J, Marino S, Martinez N, Kirschner DE, Hendricks G, Baker S, Wilson AA, Kotton DN, Kornfeld H. Intracellular bacillary burden reflects a burst size for Mycobacterium tuberculosis in vivo. Plos Pathogens. 9: e1003190. PMID 23436998 DOI: 10.1371/Journal.Ppat.1003190  0.061
2018 Van Nguyen D, Van Nguyen C, Bonsall D, Ngo TT, Carrique-Mas J, Pham AH, Bryant JE, Thwaites G, Baker S, Woolhouse M, Simmonds P. Detection and Characterization of Homologues of Human Hepatitis Viruses and Pegiviruses in Rodents and Bats in Vietnam. Viruses. 10. PMID 29495551 DOI: 10.3390/V10030102  0.061
2006 Sebaihia M, Wren BW, Mullany P, Fairweather NF, Minton N, Stabler R, Thomson NR, Roberts AP, Cerdeño-Tárraga AM, Wang H, Holden MT, Wright A, Churcher C, Quail MA, Baker S, et al. The multidrug-resistant human pathogen Clostridium difficile has a highly mobile, mosaic genome. Nature Genetics. 38: 779-86. PMID 16804543 DOI: 10.1038/Ng1830  0.061
2016 Nguyen NT, Nguyen HM, Nguyen CV, Nguyen TV, Nguyen MT, Thai HQ, Ho MH, Thwaites G, Ngo HT, Baker S, Carrique-Mas J. The use of colistin and other critical antimicrobials on pig and chicken farms in southern Vietnam and their association with resistance in commensal Escherichia coli. Applied and Environmental Microbiology. PMID 27084016 DOI: 10.1128/AEM.00337-16  0.06
2021 Carey ME, Jain R, Yousuf M, Maes M, Dyson ZA, Thu TNH, Nguyen Thi Nguyen T, Ho Ngoc Dan T, Nhu Pham Nguyen Q, Mahindroo J, Thanh Pham D, Sandha KS, Baker S, Taneja N. Spontaneous Emergence of Azithromycin Resistance in Independent Lineages of Salmonella Typhi in Northern India. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 33515460 DOI: 10.1093/cid/ciaa1773  0.06
2015 Wong VK, Baker S, Pickard DJ, Parkhill J, Page AJ, Feasey NA, Kingsley RA, Thomson NR, Keane JA, Weill FX, Edwards DJ, Hawkey J, Harris SR, Mather AE, Cain AK, et al. Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter- and intracontinental transmission events. Nature Genetics. 47: 632-9. PMID 25961941 DOI: 10.1038/ng.3281  0.06
2015 Nhung NT, Thuy CT, Trung NV, Campbell J, Baker S, Thwaites G, Hoa NT, Carrique-Mas J. Induction of Antimicrobial Resistance in Escherichia coli and Non-Typhoidal Salmonella Strains after Adaptation to Disinfectant Commonly Used on Farms in Vietnam. Antibiotics (Basel, Switzerland). 4: 480-94. PMID 27025637 DOI: 10.3390/antibiotics4040480  0.06
2016 Pham Thanh D, Karkey A, Dongol S, Ho Thi N, Thompson CN, Rabaa MA, Arjyal A, Holt KE, Wong V, Tran Vu Thieu N, Voong Vinh P, Ha Thanh T, Pradhan A, Shrestha SK, Gajurel D, ... ... Baker S, et al. A novel ciprofloxacin-resistant subclade of H58 Salmonella Typhi is associated with fluoroquinolone treatment failure. Elife. 5. PMID 26974227 DOI: 10.7554/eLife.14003  0.06
2022 Waddington C, Carey ME, Boinett CJ, Higginson E, Veeraraghavan B, Baker S. Exploiting genomics to mitigate the public health impact of antimicrobial resistance. Genome Medicine. 14: 15. PMID 35172877 DOI: 10.1186/s13073-022-01020-2  0.06
2018 Zellweger RM, Basnyat B, Shrestha P, Prajapati KG, Dongol S, Sharma PK, Koirala S, Darton TC, Boinett C, Thompson CN, Thwaites GE, Baker S, Karkey A. Changing Antimicrobial Resistance Trends in Kathmandu, Nepal: A 23-Year Retrospective Analysis of Bacteraemia. Frontiers in Medicine. 5: 262. PMID 30283784 DOI: 10.3389/fmed.2018.00262  0.06
2021 Mai ST, Bodhidatta L, Turner P, Wangchuk S, Ha Thanh T, Voong Vinh P, Pham DT, Rabaa MA, Thwaites GE, Thomson NR, Baker S, Chung The H. The evolutionary history of serotype 6 in Asia. Microbial Genomics. 7. PMID 34904947 DOI: 10.1099/mgen.0.000736  0.059
2017 Pokharel S, Basnyat B, Arjyal A, Mahat SP, Kc RK, Bhuju A, Poudyal B, Kestelyn E, Shrestha R, Phuong DNT, Thapa R, Karki M, Dongol S, Karkey A, Wolbers M, ... Baker S, et al. Co-trimoxazole versus azithromycin for the treatment of undifferentiated febrile illness in Nepal: study protocol for a randomized controlled trial. Trials. 18: 450. PMID 28969659 DOI: 10.1186/s13063-017-2199-6  0.059
2018 Klemm EJ, Shakoor S, Page AJ, Qamar FN, Judge K, Saeed DK, Wong VK, Dallman TJ, Nair S, Baker S, Shaheen G, Qureshi S, Yousafzai MT, Saleem MK, Hasan Z, et al. Emergence of an Extensively Drug-ResistantSerovar Typhi Clone Harboring a Promiscuous Plasmid Encoding Resistance to Fluoroquinolones and Third-Generation Cephalosporins. Mbio. 9. PMID 29463654 DOI: 10.1128/mBio.00105-18  0.059
2018 Näsström E, Jonsson P, Johansson A, Dongol S, Karkey A, Basnyat B, Tran Vu Thieu N, Trinh Van T, Thwaites GE, Antti H, Baker S. Diagnostic metabolite biomarkers of chronic typhoid carriage. Plos Neglected Tropical Diseases. 12: e0006215. PMID 29373578 DOI: 10.1371/journal.pntd.0006215  0.058
2005 Bishop AL, Baker S, Jenks S, Fookes M, Gaora PO, Pickard D, Anjum M, Farrar J, Hien TT, Ivens A, Dougan G. Analysis of the hypervariable region of the Salmonella enterica genome associated with tRNA(leuX). Journal of Bacteriology. 187: 2469-82. PMID 15774890 DOI: 10.1128/JB.187.7.2469-2482.2005  0.058
2020 Browne AJ, Kashef Hamadani BH, Kumaran EAP, Rao P, Longbottom J, Harriss E, Moore CE, Dunachie S, Basnyat B, Baker S, Lopez AD, Day NPJ, Hay SI, Dolecek C. Drug-resistant enteric fever worldwide, 1990 to 2018: a systematic review and meta-analysis. Bmc Medicine. 18: 1. PMID 31898501 DOI: 10.1186/s12916-019-1443-1  0.058
2021 Pfavayi LT, Sibanda EN, Baker S, Woolhouse M, Mduluza T, Mutapi F. Fungal allergic sensitisation in young rural Zimbabwean children: Gut mycobiome and seroreactivity characteristics. Current Research in Microbial Sciences. 2: 100082. PMID 35028627 DOI: 10.1016/j.crmicr.2021.100082  0.058
2017 Tuan Anh N, Nga TV, Tuan HM, Tuan NS, Y DM, Vinh Chau NV, Baker S, Duong HH. Molecular epidemiology and antimicrobial resistance phenotypes of Acinetobacter baumannii isolated from patients in three hospitals in southern Vietnam. Journal of Medical Microbiology. 66: 46-53. PMID 28198682 DOI: 10.1099/jmm.0.000418  0.057
2020 Maes M, Dyson ZA, Smith SE, Goulding DA, Ludden C, Baker S, Kellam P, Reece ST, Dougan G, Scott JB. A novel therapeutic antibody screening method using bacterial high-content imaging reveals functional antibody binding phenotypes of Escherichia coli ST131. Scientific Reports. 10: 12414. PMID 32709982 DOI: 10.1038/S41598-020-69300-8  0.057
2021 Pfavayi LT, Denning DW, Baker S, Sibanda EN, Mutapi F. Determining the burden of fungal infections in Zimbabwe. Scientific Reports. 11: 13240. PMID 34168204 DOI: 10.1038/s41598-021-92605-1  0.057
2022 da Silva KE, Tanmoy AM, Pragasam AK, Iqbal J, Sajib MSI, Mutreja A, Veeraraghavan B, Tamrakar D, Qamar FN, Dougan G, Bogoch I, Seidman JC, Shakya J, Vaidya K, Carey ME, ... ... Baker S, et al. The international and intercontinental spread and expansion of antimicrobial-resistant Salmonella Typhi: a genomic epidemiology study. The Lancet. Microbe. PMID 35750070 DOI: 10.1016/S2666-5247(22)00093-3  0.057
2020 Xiong X, Qu K, Ciazynska KA, Hosmillo M, Carter AP, Ebrahimi S, Ke Z, Scheres SHW, Bergamaschi L, Grice GL, Zhang Y, Nathan JA, Baker S, James LC, et al. A thermostable, closed SARS-CoV-2 spike protein trimer. Nature Structural & Molecular Biology. PMID 32737467 DOI: 10.1038/s41594-020-0478-5  0.057
2021 Cowley LA, Afrad MH, Rahman SIA, Mamun MMA, Chin T, Mahmud A, Rahman MZ, Billah MM, Khan MH, Sultana S, Khondaker T, Baker S, Banik N, Alam AN, Mannoor K, et al. Genomics, social media and mobile phone data enable mapping of SARS-CoV-2 lineages to inform health policy in Bangladesh. Nature Microbiology. PMID 34497354 DOI: 10.1038/s41564-021-00955-3  0.057
2022 Kean IRL, Wagner J, Wijeyesekera A, De Goffau M, Thurston S, Clark JA, White DK, Ridout J, Agrawal S, Kayani R, O'Donnell R, Ramnarayan P, Peters MJ, Klein N, Holmes E, ... ... Baker S, et al. Profiling gut microbiota and bile acid metabolism in critically ill children. Scientific Reports. 12: 10432. PMID 35729169 DOI: 10.1038/s41598-022-13640-0  0.057
2017 Thi Ty Hang V, Thi Han Ny N, My Phuc T, Thi Thanh Tam P, Thao Huong D, Dang Trung Nghia H, Tran Anh Vu N, Thi Hong Phuong P, Van Xang N, Dong N, Nhu Hiep P, Van Hung N, Tinh Hien T, Rabaa M, Thwaites GE, ... Baker S, et al. Evaluation of the Luminex xTAG Respiratory Viral Panel FAST v2 assay for detection of multiple respiratory viral pathogens in nasal and throat swabs in Vietnam. Wellcome Open Research. 2: 80. PMID 29503874 DOI: 10.12688/wellcomeopenres.12429.1  0.057
2021 Hawkey J, Paranagama K, Baker KS, Bengtsson RJ, Weill FX, Thomson NR, Baker S, Cerdeira L, Iqbal Z, Hunt M, Ingle DJ, Dallman TJ, Jenkins C, Williamson DA, Holt KE. Global population structure and genotyping framework for genomic surveillance of the major dysentery pathogen, Shigella sonnei. Nature Communications. 12: 2684. PMID 33976138 DOI: 10.1038/s41467-021-22700-4  0.057
2009 Vinh H, Nhu NT, Nga TV, Duy PT, Campbell JI, Hoang NV, Boni MF, My PV, Parry C, Nga TT, Van Minh P, Thuy CT, Diep TS, Phuong le T, Chinh MT, ... ... Baker S, et al. A changing picture of shigellosis in southern Vietnam: shifting species dominance, antimicrobial susceptibility and clinical presentation. Bmc Infectious Diseases. 9: 204. PMID 20003464 DOI: 10.1186/1471-2334-9-204  0.057
2016 Wong VK, Baker S, Connor TR, Pickard D, Page AJ, Dave J, Murphy N, Holliman R, Sefton A, Millar M, Dyson ZA, Dougan G, Holt KE. An extended genotyping framework for Salmonella enterica serovar Typhi, the cause of human typhoid. Nature Communications. 7: 12827. PMID 27703135 DOI: 10.1038/ncomms12827  0.057
2014 Dunstan SJ, Hue NT, Han B, Li Z, Tram TT, Sim KS, Parry CM, Chinh NT, Vinh H, Lan NP, Thieu NT, Vinh PV, Koirala S, Dongol S, Arjyal A, ... ... Baker S, et al. Variation at HLA-DRB1 is associated with resistance to enteric fever. Nature Genetics. 46: 1333-6. PMID 25383971 DOI: 10.1038/Ng.3143  0.057
2013 Charles RC, Sultana T, Alam MM, Yu Y, Wu-Freeman Y, Bufano MK, Rollins SM, Tsai L, Harris JB, LaRocque RC, Leung DT, Brooks WA, Nga TV, Dongol S, Basnyat B, ... ... Baker S, et al. Identification of immunogenic Salmonella enterica serotype Typhi antigens expressed in chronic biliary carriers of S. Typhi in Kathmandu, Nepal. Plos Neglected Tropical Diseases. 7: e2335. PMID 23936575 DOI: 10.1371/Journal.Pntd.0002335  0.057
2016 Thi Khanh Nhu N, Riordan DW, Do Hoang Nhu T, Thanh DP, Thwaites G, Huong Lan NP, Wren BW, Baker S, Stabler RA. The induction and identification of novel Colistin resistance mutations in Acinetobacter baumannii and their implications. Scientific Reports. 6: 28291. PMID 27329501 DOI: 10.1038/srep28291  0.057
2015 Anders KL, Thompson CN, Thuy NT, Nguyet NM, Tu le TP, Dung TT, Phat VV, Van NT, Hieu NT, Tham NT, Ha PT, Lien le B, Chau NV, Baker S, Simmons CP. The epidemiology and aetiology of diarrhoeal disease in infancy in southern Vietnam: a birth cohort study. International Journal of Infectious Diseases : Ijid : Official Publication of the International Society For Infectious Diseases. 35: 3-10. PMID 25813553 DOI: 10.1016/j.ijid.2015.03.013  0.056
2024 Schmitz KH, Chongaway A, Saeed A, Fontana T, Wood K, Gibson S, Trilk J, Adsul P, Baker S. An initiative to implement a triage and referral system to make exercise and rehabilitation referrals standard of care in oncology. Supportive Care in Cancer : Official Journal of the Multinational Association of Supportive Care in Cancer. 32: 259. PMID 38561546 DOI: 10.1007/s00520-024-08457-8  0.056
2024 Madhav A, Bousfield R, Pereira-Dias J, Cormie C, Forrest S, Keane J, Kermack L, Higginson E, Dougan G, Spiers H, Massey D, Sharkey L, Rutter C, Woodward J, Russell N, ... ... Baker S, et al. A metagenomic prospective cohort study on gut microbiome composition and clinical infection in small bowel transplantation. Gut Microbes. 16: 2323232. PMID 38439546 DOI: 10.1080/19490976.2024.2323232  0.056
2018 Toan ND, Darton TC, Boinett CJ, Campbell JI, Karkey A, Kestelyn E, Thinh LQ, Mau NK, Thanh Tam PT, Nhan LNT, Quang Minh NN, Phuong CN, Hung NT, Xuan NM, Thuong TC, ... Baker S, et al. Clinical features, antimicrobial susceptibility patterns and genomics of bacteria causing neonatal sepsis in a children's hospital in Vietnam: protocol for a prospective observational study. Bmj Open. 8: e019611. PMID 29371283 DOI: 10.1136/bmjopen-2017-019611  0.056
2022 Manandhar S, Nguyen Q, Nguyen Thi Nguyen T, Pham DT, Rabaa MA, Dongol S, Basnyat B, Dixit SM, Baker S, Karkey A. Genomic epidemiology, antimicrobial resistance and virulence factors of complex causing potential community-onset bloodstream infections in a tertiary care hospital of Nepal. Jac-Antimicrobial Resistance. 4: dlac050. PMID 35663828 DOI: 10.1093/jacamr/dlac050  0.056
2015 Parry CM, Thieu NT, Dolecek C, Karkey A, Gupta R, Turner P, Dance D, Maude RR, Ha V, Tran CN, Thi PL, Be BP, Phi LT, Ngoc RN, Ghose A, ... ... Baker S, et al. Clinically and microbiologically derived azithromycin susceptibility breakpoints for Salmonella enterica serovars Typhi and Paratyphi A. Antimicrobial Agents and Chemotherapy. 59: 2756-64. PMID 25733500 DOI: 10.1128/AAC.04729-14  0.056
2015 Basnyat B, Baker S. Typhoid carriage in the gallbladder. Lancet. PMID 25892678 DOI: 10.1016/S0140-6736(15)60029-0  0.056
2020 Yen NTP, Nhung NT, Van NTB, Cuong NV, Tien Chau LT, Trinh HN, Tuat CV, Tu ND, Phu Huong Lan N, Campbell J, Thwaites G, Baker S, Carrique-Mas J. Antimicrobial residues, non-typhoidal , spp. and associated microbiological hazards in retail shrimps purchased in Ho Chi Minh city (Vietnam). Food Control. 107: 106756. PMID 31902975 DOI: 10.1016/j.foodcont.2019.106756  0.056
2006 Roumagnac P, Weill FX, Dolecek C, Baker S, Brisse S, Chinh NT, Le TA, Acosta CJ, Farrar J, Dougan G, Achtman M. Evolutionary history of Salmonella typhi. Science (New York, N.Y.). 314: 1301-4. PMID 17124322 DOI: 10.1126/science.1134933  0.056
2015 Le V, Nhu NT, Cerdeno-Tarraga A, Campbell JI, Tuyen HT, Nhu Tdo H, Tam PT, Schultsz C, Thwaites G, Thomson NR, Baker S. Genetic characterization of three qnrS1-harbouring multidrug-resistance plasmids and qnrS1-containing transposons circulating in Ho Chi Minh City, Vietnam. Journal of Medical Microbiology. 64: 869-78. PMID 26272054 DOI: 10.1099/jmm.0.000100  0.056
2020 Sridhar S, Forrest S, Kean I, Young J, Bartholdson Scott J, Maes M, Pereira-Dias J, Parmar S, Routledge M, Sparkes D, Rivett L, Dougan G, Weekes M, Curran M, Goodfellow I, ... Baker S, et al. A blueprint for the implementation of a validated approach for the detection of SARS-Cov2 in clinical samples in academic facilities. Wellcome Open Research. 5: 110. PMID 33134554 DOI: 10.12688/wellcomeopenres.15937.1  0.055
2007 Baker S, Hardy J, Sanderson KE, Quail M, Goodhead I, Kingsley RA, Parkhill J, Stocker B, Dougan G. A novel linear plasmid mediates flagellar variation in Salmonella Typhi. Plos Pathogens. 3: e59. PMID 17500588 DOI: 10.1371/journal.ppat.0030059  0.055
2015 Le Minh V, Thi Khanh Nhu N, Vinh Phat V, Thompson C, Huong Lan NP, Thieu Nga TV, Thanh Tam PT, Tuyen HT, Hoang Nhu TD, Van Hao N, Thi Loan H, Minh Yen L, Parry CM, Trung Nghia HD, Campbell JI, ... ... Baker S, et al. In vitro activity of colistin in antimicrobial combination against carbapenem-resistant Acinetobacter baumannii isolated from patients with ventilator-associated pneumonia in Vietnam. Journal of Medical Microbiology. 64: 1162-9. PMID 26297024 DOI: 10.1099/jmm.0.000137  0.055
2023 Parry CM, Qamar FN, Rijal S, McCann N, Baker S, Basnyat B. What Should We Be Recommending for the Treatment of Enteric Fever? Open Forum Infectious Diseases. 10: S26-S31. PMID 37274536 DOI: 10.1093/ofid/ofad179  0.055
2014 Baker S, Karkey A, Parry C. Are we adequately prepared for the emergence of Salmonella enterica serovar Paratyphi A? The Lancet. Global Health. 2: e195-6. PMID 25103052 DOI: 10.1016/S2214-109X(14)70009-9  0.055
2014 Harrison JW, Dung TT, Siddiqui F, Korbrisate S, Bukhari H, Tra MP, Hoang NV, Carrique-Mas J, Bryant J, Campbell JI, Studholme DJ, Wren BW, Baker S, Titball RW, Champion OL. Identification of possible virulence marker from Campylobacter jejuni isolates. Emerging Infectious Diseases. 20: 1026-9. PMID 24856088 DOI: 10.3201/Eid2006.130635  0.055
2020 Lu L, Robertson G, Ashworth J, Pham Hong A, Shi T, Ivens A, Thwaites G, Baker S, Woolhouse M. Epidemiology and Phylogenetic Analysis of Viral Respiratory Infections in Vietnam. Frontiers in Microbiology. 11: 833. PMID 32499763 DOI: 10.3389/fmicb.2020.00833  0.055
2016 Karki M, Pandit S, Baker S, Basnyat B. Cotrimoxazole treats fluoroquinolone-resistant Salmonella typhi H58 infection. Bmj Case Reports. 2016. PMID 27797841 DOI: 10.1136/bcr-2016-217223  0.055
2013 Tra My PV, Lam HM, Thompson CN, Phuc HL, Tuyet PT, Vinh H, Hoang NV, Minh P, Vinh NT, Thuy CT, Nga TT, Hau NT, Chinh NT, Thuong TC, Tuan HM, ... ... Baker S, et al. The dynamics of GII.4 Norovirus in Ho Chi Minh City, Vietnam. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. 18: 335-43. PMID 23612321 DOI: 10.1016/J.Meegid.2013.04.014  0.055
2007 Yu C, Baker S, Morse LJ, Gardiner J, Meehan M, Esposito A, Roberto R, Ellison RT. Clinical and laboratory findings in individuals with acute norovirus disease. Archives of Internal Medicine. 167: 1903-5. PMID 17893314 DOI: 10.1001/archinte.167.17.1903  0.055
2014 Näsström E, Vu Thieu NT, Dongol S, Karkey A, Voong Vinh P, Ha Thanh T, Johansson A, Arjyal A, Thwaites G, Dolecek C, Basnyat B, Baker S, Antti H. Salmonella Typhi and Salmonella Paratyphi A elaborate distinct systemic metabolite signatures during enteric fever. Elife. 3. PMID 24902583 DOI: 10.7554/eLife.03100  0.054
2014 Baker SR, Patel RH, Lelkes V, Castro A, Sarmast U, Whang J. Non-spinal musculoskeletal malpractice suits against radiologists in the USA--rates, anatomic locations, and payments in a survey of 8,265 radiologists. Emergency Radiology. 21: 29-34. PMID 23996223 DOI: 10.1007/s10140-013-1154-4  0.054
2023 Bošković F, Zhu J, Tivony R, Ohmann A, Chen K, Alawami MF, Đorđević M, Ermann N, Pereira-Dias J, Fairhead M, Howarth M, Baker S, Keyser UF. Simultaneous identification of viruses and viral variants with programmable DNA nanobait. Nature Nanotechnology. PMID 36646828 DOI: 10.1038/s41565-022-01287-x  0.054
2019 Pitzer VE, Meiring J, Martineau FP, Watson CH, Kang G, Basnyat B, Baker S. The Invisible Burden: Diagnosing and Combatting Typhoid Fever in Asia and Africa. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 69: S395-S401. PMID 31612938 DOI: 10.1093/cid/ciz611  0.054
2023 Baker S, Scott TA. Antimicrobial-resistant Shigella: where do we go next? Nature Reviews. Microbiology. 1-2. PMID 37188805 DOI: 10.1038/s41579-023-00906-1  0.054
2015 Baker S. Infectious disease. A return to the pre-antimicrobial era? Science (New York, N.Y.). 347: 1064-6. PMID 25745145 DOI: 10.1126/science.aaa2868  0.054
2022 Nhung NT, Yen NTP, Dung NTT, Nhan NTM, Phu DH, Kiet BT, Thwaites G, Geskus RB, Baker S, Carrique-Mas J, Choisy M. Antimicrobial resistance in commensal from humans and chickens in the Mekong Delta of Vietnam is driven by antimicrobial usage and potential cross-species transmission. Jac-Antimicrobial Resistance. 4: dlac054. PMID 35663829 DOI: 10.1093/jacamr/dlac054  0.054
2021 Illingworth CJ, Hamilton WL, Warne B, Routledge M, Popay A, Jackson C, Fieldman T, Meredith LW, Houldcroft CJ, Hosmillo M, Jahun AS, Caller LG, Caddy SL, Yakovleva A, Hall G, ... ... Baker S, et al. Superspreaders drive the largest outbreaks of hospital onset COVID-19 infections. Elife. 10. PMID 34425938 DOI: 10.7554/eLife.67308  0.054
2021 Clark JA, Kean IRL, Curran MD, Khokhar F, White D, Daubney E, Conway Morris A, Navapurkar V, Bartholdson Scott J, Maes M, Bousfield R, Gouliouris T, Agrawal S, Inwald D, Zhang Z, ... ... Baker S, et al. Rapid Assay for Sick Children with Acute Lung infection Study (RASCALS): diagnostic cohort study protocol. Bmj Open. 11: e056197. PMID 34845080 DOI: 10.1136/bmjopen-2021-056197  0.054
2019 Mahindroo J, Thanh DP, Nguyen TNT, Mohan B, Thakur S, Baker S, Taneja N. Endemic fluoroquinolone-resistant Salmonellaenterica serovar Kentucky ST198 in northern India. Microbial Genomics. PMID 31166889 DOI: 10.1099/mgen.0.000275  0.054
2018 Thuy DB, Campbell J, Nhat LTH, Hoang NVM, Hao NV, Baker S, Geskus RB, Thwaites GE, Chau NVV, Thwaites CL. Hospital-acquired colonization and infections in a Vietnamese intensive care unit. Plos One. 13: e0203600. PMID 30192894 DOI: 10.1371/journal.pone.0203600  0.054
2016 Wong VK, Holt KE, Okoro C, Baker S, Pickard DJ, Marks F, Page AJ, Olanipekun G, Munir H, Alter R, Fey PD, Feasey NA, Weill FX, Le Hello S, et al. Molecular Surveillance Identifies Multiple Transmissions of Typhoid in West Africa. Plos Neglected Tropical Diseases. 10: e0004781. PMID 27657909 DOI: 10.1371/journal.pntd.0004781  0.054
2008 Baker SR, Tilak GS, Geannette C, Romero MJ, Patel A, Pan L. The value of the internship year for radiologists: a retrospective analysis as assessed by current residents and fellows. Academic Radiology. 15: 1205-10. PMID 18692762 DOI: 10.1016/j.acra.2008.04.015  0.053
2017 Thuy DB, Campbell J, Hoang NVM, Trinh TTT, Duong HTH, Hieu NC, Duy NHA, Hao NV, Baker S, Thwaites GE, Chau NVV, Thwaites CL. A one-year prospective study of colonization with antimicrobial-resistant organisms on admission to a Vietnamese intensive care unit. Plos One. 12: e0184847. PMID 28910379 DOI: 10.1371/journal.pone.0184847  0.053
2023 Li L, Short FL, Hassan KA, Naidu V, Pokhrel A, Nagy SS, Prity FT, Shah BS, Afrin N, Baker S, Parkhill J, Cain AK, Paulsen IT. Systematic analyses identify modes of action of ten clinically relevant biocides and antibiotic antagonism in Acinetobacter baumannii. Nature Microbiology. PMID 37814070 DOI: 10.1038/s41564-023-01474-z  0.053
2021 Le NTH, Ho NT, Grenfell B, Baker S, Geskus RB. Biphasic pattern in the effect of severe measles infection; the difference between additive and multiplicative scale. Bmc Infectious Diseases. 21: 1249. PMID 34906096 DOI: 10.1186/s12879-021-06930-x  0.053
2016 Van Vinh Chau N, Buu Chau L, Desquesnes M, Herder S, Phu Huong Lan N, Campbell JI, Van Cuong N, Yimming B, Chalermwong P, Jittapalapong S, Ramon Franco J, Tri Tue N, Rabaa MA, Carrique-Mas J, Pham Thi Thanh T, ... ... Baker S, et al. A Clinical and Epidemiological Investigation of the First Reported Human Infection With the Zoonotic Parasite Trypanosoma evansi in Southeast Asia. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 62: 1002-1008. PMID 26908809 DOI: 10.1093/cid/ciw052  0.053
2017 Darton TC, Meiring JE, Tonks S, Khan MA, Khanam F, Shakya M, Thindwa D, Baker S, Basnyat B, Clemens JD, Dougan G, Dolecek C, Dunstan SJ, Gordon MA, Heyderman RS, et al. The STRATAA study protocol: a programme to assess the burden of enteric fever in Bangladesh, Malawi and Nepal using prospective population census, passive surveillance, serological studies and healthcare utilisation surveys. Bmj Open. 7: e016283. PMID 28674145 DOI: 10.1136/bmjopen-2017-016283  0.053
2020 da Silva KE, Baker S, Croda J, Nguyen TNT, Boinett CJ, Barbosa LS, Tetila A, Simionatto S. Risk factors for polymyxin-resistant carbapenemase-producing Enterobacteriaceae in critically patients: An epidemiological and clinical study. International Journal of Antimicrobial Agents. 105882. PMID 31923570 DOI: 10.1016/j.ijantimicag.2020.105882  0.053
2022 Du P, Liu C, Fan S, Baker S, Guo J. The Role of Plasmid and Resistance Gene Acquisition in the Emergence of ST23 Multi-Drug Resistant, Hypervirulent Klebsiella pneumoniae. Microbiology Spectrum. e0192921. PMID 35297657 DOI: 10.1128/spectrum.01929-21  0.053
2020 Mäklin T, Kallonen T, David S, Boinett CJ, Pascoe B, Méric G, Aanensen DM, Feil EJ, Baker S, Parkhill J, Sheppard SK, Corander J, Honkela A. High-resolution sweep metagenomics using fast probabilistic inference. Wellcome Open Research. 5: 14. PMID 34746439 DOI: 10.12688/wellcomeopenres.15639.2  0.053
2019 Msefula CL, Olgemoeller F, Jambo N, Segula D, Van Tan T, Nyirenda TS, Nedi W, Kennedy N, Graham M, Henrion MYR, Baker S, Feasey N, Gordon M, Heyderman RS. Ascertaining the burden of invasive Salmonella disease in hospitalised febrile children aged under four years in Blantyre, Malawi. Plos Neglected Tropical Diseases. 13: e0007539. PMID 31314752 DOI: 10.1371/journal.pntd.0007539  0.053
2008 Bishop A, House D, Perkins T, Baker S, Kingsley RA, Dougan G. Interaction of Salmonella enterica serovar Typhi with cultured epithelial cells: roles of surface structures in adhesion and invasion. Microbiology (Reading, England). 154: 1914-1926. PMID 18599820 DOI: 10.1099/mic.0.2008/016998-0  0.053
2004 Sofocleous CT, Klein KM, Hubbi B, Brown KT, Weiss SH, Kannarkat G, Hinrichs CR, Contractor D, Bahramipour P, Barone A, Baker SR. Histopathologic evaluation of tissue extracted on the radiofrequency probe after ablation of liver tumors: Preliminary findings American Journal of Roentgenology. 183: 209-213. PMID 15208140  0.052
2018 Baker S, The HC. Recent insights into Shigella. Current Opinion in Infectious Diseases. PMID 30048255 DOI: 10.1097/QCO.0000000000000475  0.052
2011 My PVT, Rabaa MA, Vinh H, Holmes EC, Hoang NVM, Vinh NT, Phuong LT, Tham NT, Bay PVB, Campbell JI, Farrar J, Baker S. The emergence of rotavirus G12 and the prevalence of enteric viruses in hospitalized pediatric diarrheal patients in Southern Vietnam American Journal of Tropical Medicine and Hygiene. 85: 768-775. PMID 21976585 DOI: 10.4269/Ajtmh.2011.11-0364  0.052
2022 Illingworth CJR, Hamilton WL, Jackson C, Warne B, Popay A, Meredith L, Hosmillo M, Jahun A, Fieldman T, Routledge M, Houldcroft CJ, Caller L, Caddy S, Yakovleva A, Hall G, ... ... Baker S, et al. A2B-COVID: A tool for rapidly evaluating potential SARS-CoV-2 transmission events. Molecular Biology and Evolution. PMID 35106603 DOI: 10.1093/molbev/msac025  0.052
2010 Aquilina NJ, Delgado-Saborit JM, Meddings C, Baker S, Harrison RM, Jacob P, Wilson M, Yu L, Duan M, Benowitz NL. Environmental and biological monitoring of exposures to PAHs and ETS in the general population. Environment International. 36: 763-71. PMID 20591483 DOI: 10.1016/j.envint.2010.05.015  0.052
2011 Vien le TM, Abuoun M, Morrison V, Thomson N, Campbell JI, Woodward MJ, Van Vinh Chau N, Farrar J, Schultsz C, Baker S. Differential phenotypic and genotypic characteristics of qnrS1-harboring plasmids carried by hospital and community commensal enterobacteria. Antimicrobial Agents and Chemotherapy. 55: 1798-802. PMID 21282449 DOI: 10.1128/AAC.01200-10  0.052
2015 Holt KE, Wertheim H, Zadoks RN, Baker S, Whitehouse CA, Dance D, Jenney A, Connor TR, Hsu LY, Severin J, Brisse S, Cao H, Wilksch J, Gorrie C, Schultz MB, et al. Genomic analysis of diversity, population structure, virulence, and antimicrobial resistance in Klebsiella pneumoniae, an urgent threat to public health. Proceedings of the National Academy of Sciences of the United States of America. PMID 26100894 DOI: 10.1073/Pnas.1501049112  0.052
2019 Kestelyn E, Le Phuong C, Ilo Van Nuil J, Dong Thi HT, Minh Nguyen N, Dinh The T, Chambers M, Simmons CP, Nguyen Trong T, Nguyen The D, Phuong LT, Do Van D, Duc Anh D, Nguyen Van VC, Baker S, et al. Expert voices and equal partnerships: establishing Controlled Human Infection Models (CHIMs) in Vietnam. Wellcome Open Research. 4: 143. PMID 31681857 DOI: 10.12688/wellcomeopenres.15337.1  0.052
2019 Barkham T, Zadoks RN, Azmai MNA, Baker S, Bich VTN, Chalker V, Chau ML, Dance D, Deepak RN, van Doorn HR, Gutierrez RA, Holmes MA, Huong LNP, Koh TH, Martins E, et al. One hypervirulent clone, sequence type 283, accounts for a large proportion of invasive Streptococcus agalactiae isolated from humans and diseased tilapia in Southeast Asia. Plos Neglected Tropical Diseases. 13: e0007421. PMID 31246981 DOI: 10.1371/Journal.Pntd.0007421  0.052
2015 Thompson CN, Zelner JL, Nhu Tdo H, Phan MV, Hoang Le P, Nguyen Thanh H, Vu Thuy D, Minh Nguyen N, Ha Manh T, Van Hoang Minh T, Lu Lan V, Nguyen Van Vinh C, Tran Tinh H, von Clemm E, Storch H, ... ... Baker S, et al. The impact of environmental and climatic variation on the spatiotemporal trends of hospitalized pediatric diarrhea in Ho Chi Minh City, Vietnam. Health & Place. 35: 147-54. PMID 26402922 DOI: 10.1016/J.Healthplace.2015.08.001  0.052
2015 Thompson CN, Phan MV, Hoang NV, Minh PV, Vinh NT, Thuy CT, Nga TT, Rabaa MA, Duy PT, Dung TT, Phat VV, Nga TV, Tu le TP, Tuyen HT, Yoshihara K, ... ... Baker S, et al. A prospective multi-center observational study of children hospitalized with diarrhea in Ho Chi Minh City, Vietnam. The American Journal of Tropical Medicine and Hygiene. 92: 1045-52. PMID 25802437 DOI: 10.4269/ajtmh.14-0655  0.052
2002 Hirschorn D, Eber C, Samuels P, Gujrathi S, Baker SR. Filmless in New Jersey: the New Jersey Medical School PACS Project Journal of Digital Imaging : the Official Journal of the Society For Computer Applications in Radiology. 15: 7-12. PMID 12105690  0.051
2015 Anh PH, Van Cuong N, Son NT, Tue NT, Kosoy M, Woolhouse ME, Baker S, Bryant JE, Thwaites G, Carrique-Mas JJ, Rabaa MA. Diversity of Bartonella spp. in Bats, Southern Vietnam. Emerging Infectious Diseases. 21: 1266-7. PMID 26079810 DOI: 10.3201/Eid2107.141760  0.051
2011 Parry CM, Wijedoru L, Arjyal A, Baker S. The utility of diagnostic tests for enteric fever in endemic locations. Expert Review of Anti-Infective Therapy. 9: 711-25. PMID 21692675 DOI: 10.1586/eri.11.47  0.051
2010 Baker S, Favorov M, Dougan G. Searching for the elusive typhoid diagnostic. Bmc Infectious Diseases. 10: 45. PMID 20205702 DOI: 10.1186/1471-2334-10-45  0.051
2013 Baker SR, Lelkes V, Patel RH, Castro A, Sarmast U, Whang J. Spinal-related malpractice suits against radiologists in the USA-rates, anatomic location, percent of adverse judgments, and average payments. Emergency Radiology. 20: 513-6. PMID 23990265 DOI: 10.1007/s10140-013-1150-8  0.051
2018 Saha S, Tanmoy AM, Andrews JR, Sajib MSI, Yu AT, Baker S, Luby SP, Saha SK. Evaluating PCR-Based Detection of Typhi and Paratyphi A in the Environment as an Enteric Fever Surveillance Tool. The American Journal of Tropical Medicine and Hygiene. PMID 30426919 DOI: 10.4269/ajtmh.18-0428  0.051
2007 Baker S, Holt K, Whitehead S, Goodhead I, Perkins T, Stocker B, Hardy J, Dougan G. A linear plasmid truncation induces unidirectional flagellar phase change in H:z66 positive Salmonella Typhi. Molecular Microbiology. 66: 1207-18. PMID 17976161 DOI: 10.1111/j.1365-2958.2007.05995.x  0.05
2021 Hoa TN, Munshi SU, Ngoc KN, Ngoc CL, Thanh TTT, Akther T, Tabassum S, Parvin N, Baker S, Rahman M. A tightly clustered hepatitis E virus genotype 1a is associated with endemic and outbreak infections in Bangladesh. Plos One. 16: e0255054. PMID 34293039 DOI: 10.1371/journal.pone.0255054  0.05
2011 Croucher NJ, Harris SR, Fraser C, Quail MA, Burton J, van der Linden M, McGee L, von Gottberg A, Song JH, Ko KS, Pichon B, Baker S, Parry CM, Lambertsen LM, Shahinas D, et al. Rapid pneumococcal evolution in response to clinical interventions. Science (New York, N.Y.). 331: 430-4. PMID 21273480 DOI: 10.1126/Science.1198545  0.05
2013 Karkey A, Thompson CN, Tran Vu Thieu N, Dongol S, Le Thi Phuong T, Voong Vinh P, Arjyal A, Martin LB, Rondini S, Farrar JJ, Dolecek C, Basnyat B, Baker S. Differential epidemiology of Salmonella Typhi and Paratyphi A in Kathmandu, Nepal: a matched case control investigation in a highly endemic enteric fever setting. Plos Neglected Tropical Diseases. 7: e2391. PMID 23991240 DOI: 10.1371/journal.pntd.0002391  0.05
2018 Thi Quynh Nhi L, de Alwis R, Khanh Lam P, Nhon Hoa N, Minh Nhan N, Thi Tu Oanh L, Thanh Nam D, Nguyen Ngoc Han B, Thi Thuy Huyen H, Thi Tuyen D, Thuy Duong V, Lan Vi L, Thi Thuy Tien B, Thi Diem Tuyet H, Hoang Nha L, ... ... Baker S, et al. Quantifying antimicrobial access and usage for paediatric diarrhoeal disease in an urban community setting in Asia. The Journal of Antimicrobial Chemotherapy. PMID 29982636 DOI: 10.1093/jac/dky231  0.05
2017 Kintz E, Heiss C, Black I, Donohue N, Brown N, Davies MR, Azadi P, Baker S, Kaye PM, van der Woude M. Salmonella Typhi Lipopolysaccharide O-antigen Modifications Impact on Serum Resistance and Antibody Recognition. Infection and Immunity. PMID 28167670 DOI: 10.1128/Iai.01021-16  0.05
2012 Castonguay-Vanier J, Davong V, Bouthasavong L, Sengdetka D, Simmalavong M, Seupsavith A, Dance DA, Baker S, Le Thi Phuong T, Vongsouvath M, Newton PN. Evaluation of a simple blood culture amplification and antigen detection method for diagnosis of Salmonella enterica serovar typhi bacteremia. Journal of Clinical Microbiology. 51: 142-8. PMID 23100346 DOI: 10.1128/JCM.02360-12  0.05
2022 Clark J, White D, Daubney E, Curran M, Bousfield R, Gouliouris T, Powell E, Palmer A, Agrawal S, Inwald D, Kean I, Török ME, Baker S, Pathan N. Low diagnostic yield and time to diagnostic confirmation results in prolonged use of antimicrobials in critically ill children. Wellcome Open Research. 6: 119. PMID 35299710 DOI: 10.12688/wellcomeopenres.16848.2  0.05
2008 Baker S, Pickard D, Whitehead S, Farrar J, Dougan G. Mobilization of the incQ plasmid R300B with a chromosomal conjugation system in Salmonella enterica serovar typhi. Journal of Bacteriology. 190: 4084-7. PMID 18390666 DOI: 10.1128/JB.00065-08  0.05
2023 Clark JA, Curran MD, Gouliouris T, Conway Morris A, Bousfield R, Navapurkar V, Kean IRL, Daubney E, White D, Baker S, Pathan N. Rapid Detection of Antimicrobial Resistance Genes in Critically Ill Children Using a Custom TaqMan Array Card. Antibiotics (Basel, Switzerland). 12. PMID 38136735 DOI: 10.3390/antibiotics12121701  0.05
2022 Brevini T, Maes M, Webb GJ, John BV, Fuchs CD, Buescher G, Wang L, Griffiths C, Brown ML, Scott WE, Pereyra-Gerber P, Gelson WTH, Brown S, Dillon S, Muraro D, ... ... Baker S, et al. FXR inhibition may protect from SARS-CoV-2 infection by reducing ACE2. Nature. PMID 36470304 DOI: 10.1038/s41586-022-05594-0  0.05
2005 Wain J, House D, Zafar A, Baker S, Nair S, Kidgell C, Bhutta Z, Dougan G, Hasan R. Vi antigen expression in Salmonella enterica serovar Typhi clinical isolates from Pakistan. Journal of Clinical Microbiology. 43: 1158-65. PMID 15750077 DOI: 10.1128/JCM.43.3.1158-1165.2005  0.05
2018 Antillon M, Saad NJ, Baker S, Pollard AJ, Pitzer VE. The Relationship Between Blood Sample Volume and Diagnostic Sensitivity of Blood Culture for Typhoid and Paratyphoid Fever: A Systematic Review and Meta-Analysis. The Journal of Infectious Diseases. PMID 30307563 DOI: 10.1093/infdis/jiy471  0.05
2017 Berto A, Day J, Van Vinh Chau N, Thwaites GE, My NN, Baker S, Darton TC. Current challenges and possible solutions to improve access to care and treatment for hepatitis C infection in Vietnam: a systematic review. Bmc Infectious Diseases. 17: 260. PMID 28399806 DOI: 10.1186/s12879-017-2360-6  0.05
2015 Chung The H, Karkey A, Pham Thanh D, Boinett CJ, Cain AK, Ellington M, Baker KS, Dongol S, Thompson C, Harris SR, Jombart T, Le Thi Phuong T, Tran Do Hoang N, Ha Thanh T, Shretha S, ... ... Baker S, et al. A high-resolution genomic analysis of multidrug-resistant hospital outbreaks of Klebsiella pneumoniae. Embo Molecular Medicine. 7: 227-39. PMID 25712531 DOI: 10.15252/emmm.201404767  0.05
2016 Chung The H, Rabaa MA, Pham Thanh D, De Lappe N, Cormican M, Valcanis M, Howden BP, Wangchuk S, Bodhidatta L, Mason CJ, Nguyen Thi Nguyen T, Vu Thuy D, Thompson CN, Phu Huong Lan N, Voong Vinh P, ... ... Baker S, et al. South Asia as a Reservoir for the Global Spread of Ciprofloxacin-Resistant Shigella sonnei: A Cross-Sectional Study. Plos Medicine. 13: e1002055. PMID 27483136 DOI: 10.1371/journal.pmed.1002055  0.05
2020 Iqbal J, Dehraj IF, Carey ME, Dyson ZA, Garrett D, Seidman JC, Kabir F, Saha S, Baker S, Qamar FN. A Race against Time: Reduced Azithromycin Susceptibility in Serovar Typhi in Pakistan. Msphere. 5. PMID 32699118 DOI: 10.1128/mSphere.00215-20  0.05
2014 Thompson CN, Kama M, Acharya S, Bera U, Clemens J, Crump JA, Dawainavesi A, Dougan G, Edmunds WJ, Fox K, Jenkins K, Khan MI, Koroivueta J, Levine MM, Martin LB, ... ... Baker S, et al. Typhoid fever in Fiji: a reversible plague? Tropical Medicine & International Health : Tm & Ih. 19: 1284-92. PMID 25066005 DOI: 10.1111/tmi.12367  0.05
2007 Baker S, Dougan G. The genome of Salmonella enterica serovar Typhi. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. S29-33. PMID 17582565 DOI: 10.1086/518143  0.05
2020 Mylona E, Sanchez-Garrido J, Hguyen Hoang Thu T, Dongol S, Karkey A, Baker S, Shenoy AR, Frankel G. Very long O-antigen chains of Salmonella Paratyphi A inhibit inflammasome activation and pyroptotic cell death. Cellular Microbiology. PMID 33355403 DOI: 10.1111/cmi.13306  0.049
2020 Parisi A, Phuong TLT, Mather AE, Jombart T, Tuyen HT, Lan NPH, Trang NHT, Carrique-Mas J, Campbell JI, Trung NV, Glass K, Kirk MD, Baker S. The role of animals as a source of antimicrobial resistant nontyphoidal Salmonella causing invasive and non-invasive human disease in Vietnam. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. 104534. PMID 32920195 DOI: 10.1016/j.meegid.2020.104534  0.049
2010 Klodnicki M, Earley M, Baker SR, Klodnicki W. A grisly event in the Kenai Peninsula. Emergency Radiology. 17: 423-5. PMID 20422241 DOI: 10.1007/s10140-010-0871-1  0.049
2021 Bergamaschi L, Mescia F, Turner L, Hanson AL, Kotagiri P, Dunmore BJ, Ruffieux H, De Sa A, Huhn O, Morgan MD, Gerber PP, Wills MR, Baker S, Calero-Nieto FJ, Doffinger R, et al. Longitudinal analysis reveals that delayed bystander CD8+ T cell activation and early immune pathology distinguish severe COVID-19 from mild disease. Immunity. PMID 34051148 DOI: 10.1016/j.immuni.2021.05.010  0.049
2020 Im J, Balasubramanian R, Ouedraogo M, Wandji Nana LR, Mogeni OD, Jeon HJ, van Pomeren T, Haselbeck A, Lim JK, Prifti K, Baker S, Meyer CG, Kim JH, Clemens JD, Marks F, et al. The epidemiology of dengue outbreaks in 2016 and 2017 in Ouagadougou, Burkina Faso. Heliyon. 6: e04389. PMID 32695907 DOI: 10.1016/j.heliyon.2020.e04389  0.049
2013 Holt KE, Thieu Nga TV, Thanh DP, Vinh H, Kim DW, Vu Tra MP, Campbell JI, Hoang NV, Vinh NT, Minh PV, Thuy CT, Nga TT, Thompson C, Dung TT, Nhu NT, ... ... Baker S, et al. Tracking the establishment of local endemic populations of an emergent enteric pathogen. Proceedings of the National Academy of Sciences of the United States of America. 110: 17522-7. PMID 24082120 DOI: 10.1073/pnas.1308632110  0.049
2023 Torraca V, Brokatzky D, Miles SL, Chong CE, De Silva PM, Baker S, Jenkins C, Holt KE, Baker KS, Mostowy S. Shigella serotypes associated with carriage in humans establish persistent infection in zebrafish. The Journal of Infectious Diseases. PMID 37556724 DOI: 10.1093/infdis/jiad326  0.049
2014 Baker SR. The dictated report and the radiologist's ethos. An inextricable relationship: pitfalls to avoid. European Journal of Radiology. 83: 236-8. PMID 24262977 DOI: 10.1016/j.ejrad.2013.10.019  0.048
2017 The HC, Florez de Sessions P, Jie S, Pham Thanh D, Thompson CN, Nguyen Ngoc Minh C, Chu CW, Tran TA, Thomson NR, Thwaites GE, Rabaa MA, Hibberd M, Baker S. Assessing gut microbiota perturbations during the early phase of infectious diarrhea in Vietnamese children. Gut Microbes. 0. PMID 28767339 DOI: 10.1080/19490976.2017.1361093  0.048
2018 Nga TVT, Duy PT, Lan NPH, Chau NVV, Baker S. The Control of Typhoid Fever in Vietnam. The American Journal of Tropical Medicine and Hygiene. PMID 30047368 DOI: 10.4269/ajtmh.18-0035  0.048
2021 Argimón S, Nagaraj G, Shamanna V, Darmavaram S, Vasanth AK, Prasanna A, Poojary A, Bari AK, Underwood A, Kekre M, Baker S, Aanensen DM, Lingegowda RK. Circulation of third-generation cephalosporin resistant Salmonella Typhi in Mumbai, India. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 34626469 DOI: 10.1093/cid/ciab897  0.048
2017 Hansberry DR, Agarwal N, John ES, John AM, Agarwal P, Reynolds JC, Baker SR. Evaluation of internet-based patient education materials from internal medicine subspecialty organizations: will patients understand them? Internal and Emergency Medicine. PMID 28138915 DOI: 10.1007/S11739-017-1611-2  0.048
2016 Im J, Nichols C, Bjerregaard-Andersen M, Sow AG, Løfberg S, Tall A, Pak GD, Aaby P, Baker S, Clemens JD, Espinoza LM, Konings F, May J, Monteiro M, Niang A, et al. Prevalence of Salmonella Excretion in Stool: A Community Survey in 2 Sites, Guinea-Bissau and Senegal. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 62: S50-5. PMID 26933022 DOI: 10.1093/cid/civ789  0.048
2017 Ny NTH, Anh NT, Hang VTT, Nguyet LA, Thanh TT, Ha DQ, Minh NNQ, Ha DLA, McBride A, Tuan HM, Baker S, Tam PTT, Phuc TM, Huong DT, Loi TQ, et al. Enterovirus D68 in Viet Nam (2009-2015). Wellcome Open Research. 2: 41. PMID 28852711 DOI: 10.12688/wellcomeopenres.11558.1  0.048
2023 Clark JA, Conway Morris A, Curran MD, White D, Daubney E, Kean IRL, Navapurkar V, Bartholdson Scott J, Maes M, Bousfield R, Török ME, Inwald D, Zhang Z, Agrawal S, Kanaris C, ... ... Baker S, et al. The rapid detection of respiratory pathogens in critically ill children. Critical Care (London, England). 27: 11. PMID 36627688 DOI: 10.1186/s13054-023-04303-1  0.048
2015 Hansberry DR, Agarwal N, Baker SR. Health literacy and online educational resources: an opportunity to educate patients. Ajr. American Journal of Roentgenology. 204: 111-6. PMID 25539245 DOI: 10.2214/Ajr.14.13086  0.048
2017 Juel HB, Thomaides-Brears HB, Darton TC, Jones C, Jones E, Shrestha S, Sie R, Eustace A, Galal U, Kurupati P, Van TT, Thieu NTV, Baker S, Blohmke CJ, Pollard AJ. Salmonella Typhi Bactericidal Antibodies Reduce Disease Severity but Do Not Protect against Typhoid Fever in a Controlled Human Infection Model. Frontiers in Immunology. 8: 1916. PMID 29387052 DOI: 10.3389/fimmu.2017.01916  0.047
2017 Duong VT, Tuyen HT, Minh PV, Campbell JI, Phuc HL, Nhu TDH, Tu LTP, Chau TTH, Nhi LTQ, Hung NT, Ngoc NM, Huong NTT, Vi LL, Thompson CN, Thwaites GE, ... ... Baker S, et al. No clinical benefit of empirical antimicrobial therapy for pediatric diarrhea in a high usage, high resistance setting. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 29029149 DOI: 10.1093/cid/cix844  0.047
2015 Baker KS, Dallman TJ, Ashton PM, Day M, Hughes G, Crook PD, Gilbart VL, Zittermann S, Allen VG, Howden BP, Tomita T, Valcanis M, Harris SR, Connor TR, Sintchenko V, ... ... Baker S, et al. Intercontinental dissemination of azithromycin-resistant shigellosis through sexual transmission: a cross-sectional study. The Lancet. Infectious Diseases. PMID 25936611 DOI: 10.1016/S1473-3099(15)00002-X  0.047
2017 Näsström E, Parry CM, Vu Thieu NT, Maude RR, de Jong HK, Fukushima M, Rzhepishevska O, Marks F, Panzner U, Im J, Jeon H, Park S, Chaudhury Z, Ghose A, Samad R, ... ... Baker S, et al. Reproducible diagnostic metabolites in plasma from typhoid fever patients in Asia and Africa. Elife. 6. PMID 28483042 DOI: 10.7554/eLife.15651  0.047
2014 Hansberry DR, Kraus C, Agarwal N, Baker SR, Gonzales SF. Health literacy in vascular and interventional radiology: a comparative analysis of online patient education resources. Cardiovascular and Interventional Radiology. 37: 1034-40. PMID 24482028 DOI: 10.1007/S00270-013-0752-6  0.047
2017 Lan NPH, Hien NH, Le Thi Phuong T, Thanh DP, Thieu NTV, Ngoc DTT, Tuyen HT, Vinh PV, Ellington MJ, Thwaites GE, Van Vinh Chau N, Baker S, Boinett CJ. Phenotypic and genotypic characteristics of ESBL and AmpC producing organisms associated with bacteraemia in Ho Chi Minh City, Vietnam. Antimicrobial Resistance and Infection Control. 6: 105. PMID 29046783 DOI: 10.1186/s13756-017-0265-1  0.047
2015 Parry CM, Thieu NT, Dolecek C, Karkey A, Gupta R, Turner P, Dance D, Maude RR, Ha V, Tran CN, Thi PL, Be BP, Phi LT, Ngoc RN, Ghose A, ... ... Baker S, et al. Erratum for Parry et al., Clinically and Microbiologically Derived Azithromycin Susceptibility Breakpoints for Salmonella enterica Serovars Typhi and Paratyphi A. Antimicrobial Agents and Chemotherapy. 59: 4364. PMID 26071570 DOI: 10.1128/AAC.01014-15  0.047
2014 Malla S, Dumre SP, Shakya G, Kansakar P, Rai B, Hossain A, Nair GB, Albert MJ, Sack D, Baker S, Rahman M. The challenges and successes of implementing a sustainable antimicrobial resistance surveillance programme in Nepal. Bmc Public Health. 14: 269. PMID 24650008 DOI: 10.1186/1471-2458-14-269  0.047
2020 Maes M, Dyson ZA, Higginson EE, Fernandez A, Araya P, Tennant SM, Baker S, Lagos R, Levine MM, Hormazabal JC, Dougan G. Multiple Introductions of Salmonella enterica Serovar Typhi H58 with Reduced Fluoroquinolone Susceptibility into Chile. Emerging Infectious Diseases. 26: 2736-2740. PMID 33079054 DOI: 10.3201/eid2611.201676  0.047
2014 Shah MA, Mutreja A, Thomson N, Baker S, Parkhill J, Dougan G, Bokhari H, Wren BW. Genomic epidemiology of Vibrio cholerae O1 associated with floods, Pakistan, 2010. Emerging Infectious Diseases. 20: 13-20. PMID 24378019 DOI: 10.3201/.eid2001.130428  0.046
2018 de Alwis R, Watson C, Nikolay B, Lowry JH, Thieu NTV, Van TT, Ngoc DTT, Rawalai K, Taufa M, Coriakula J, Lau CL, Nilles EJ, Edmunds WJ, Kama M, Baker S, et al. Role of Environmental Factors in Shaping Spatial Distribution of Salmonella enterica Serovar Typhi, Fiji. Emerging Infectious Diseases. 24: 284-293. PMID 29350150 DOI: 10.3201/eid2402.170704  0.046
2016 The HC, Thanh DP, Holt KE, Thomson NR, Baker S. The genomic signatures of Shigella evolution, adaptation and geographical spread. Nature Reviews. Microbiology. PMID 26923111 DOI: 10.1038/nrmicro.2016.10  0.046
2013 Pham Thanh D, Tran Vu Thieu N, Tran Thuy C, Lodén M, Tuin K, Campbell JI, Van Minh Hoang N, Voong Vinh P, Farrar JJ, Holt KE, Dougan G, Baker S. Identification of Salmonella enterica serovar Typhi genotypes by use of rapid multiplex ligation-dependent probe amplification. Journal of Clinical Microbiology. 51: 2950-8. PMID 23824765 DOI: 10.1128/JCM.01010-13  0.046
2013 Seth-Smith HM, Harris SR, Skilton RJ, Radebe FM, Golparian D, Shipitsyna E, Duy PT, Scott P, Cutcliffe LT, O'Neill C, Parmar S, Pitt R, Baker S, Ison CA, Marsh P, et al. Whole-genome sequences of Chlamydia trachomatis directly from clinical samples without culture. Genome Research. 23: 855-66. PMID 23525359 DOI: 10.1101/gr.150037.112  0.046
2022 Brindle HE, Nadjm B, Choisy M, Christley R, Griffiths M, Baker S, Bryant JE, Campbell JI, Nguyen VVC, Nguyen TND, Vu TTH, Nguyen VH, Hoang BL, Le XL, Pham HM, et al. Aetiology and Potential Animal Exposure in Central Nervous System Infections in Vietnam. Ecohealth. PMID 36227390 DOI: 10.1007/s10393-022-01611-w  0.046
2023 Kaza P, Britto XB, Mahindroo J, Singh N, Baker S, Nguyen TNT, Mavuduru RS, Mohan B, Taneja N. Extensively-drug resistant (XDR) Klebsiella pneumoniae associated with complicated urinary tract infection in Northern India. Japanese Journal of Infectious Diseases. PMID 37648492 DOI: 10.7883/yoken.JJID.2023.009  0.046
2021 Rahman SIA, Nguyen TNT, Khanam F, Thomson NR, Dyson ZA, Taylor-Brown A, Chowdhury EK, Dougan G, Baker S, Qadri F. Genetic diversity of Salmonella Paratyphi A isolated from enteric fever patients in Bangladesh from 2008 to 2018. Plos Neglected Tropical Diseases. 15: e0009748. PMID 34648506 DOI: 10.1371/journal.pntd.0009748  0.046
2023 Carey ME, Dyson ZA, Argimón S, Cerdeira L, Yeats C, Aanensen D, Mboowa G, Baker S, Tessema SK, Smith AM, Okeke IN, Holt KE. Unlocking the Potential of Genomic Data to Inform Typhoid Fever Control Policy: Supportive Resources for Genomic Data Generation, Analysis, and Visualization. Open Forum Infectious Diseases. 10: S38-S46. PMID 37274533 DOI: 10.1093/ofid/ofad044  0.046
2023 Zhu J, Tivony R, Bošković F, Pereira-Dias J, Sandler SE, Baker S, Keyser UF. Multiplexed Nanopore-Based Nucleic Acid Sensing and Bacterial Identification Using DNA Dumbbell Nanoswitches. Journal of the American Chemical Society. PMID 37220424 DOI: 10.1021/jacs.3c01649  0.046
2018 Karkey A, Joshi N, Chalise S, Joshi S, Shrestha S, Thi Nguyen TN, Dongol S, Basnyat B, Baker S, Boinett CJ. Outbreaks of Serratia marcescens and Serratia rubidaea bacteremia in a central Kathmandu hospital following the 2015 earthquakes. Transactions of the Royal Society of Tropical Medicine and Hygiene. PMID 30107587 DOI: 10.1093/trstmh/try077  0.045
2010 Holt KE, Baker S, Dongol S, Basnyat B, Adhikari N, Thorson S, Pulickal AS, Song Y, Parkhill J, Farrar JJ, Murdoch DR, Kelly DF, Pollard AJ, Dougan G. High-throughput bacterial SNP typing identifies distinct clusters of Salmonella Typhi causing typhoid in Nepalese children. Bmc Infectious Diseases. 10: 144. PMID 20509974 DOI: 10.1186/1471-2334-10-144  0.045
2004 Thomson N, Baker S, Pickard D, Fookes M, Anjum M, Hamlin N, Wain J, House D, Bhutta Z, Chan K, Falkow S, Parkhill J, Woodward M, Ivens A, Dougan G. The role of prophage-like elements in the diversity of Salmonella enterica serovars. Journal of Molecular Biology. 339: 279-300. PMID 15136033 DOI: 10.1016/J.Jmb.2004.03.058  0.045
2011 Parry CM, Vinh H, Chinh NT, Wain J, Campbell JI, Hien TT, Farrar JJ, Baker S. The influence of reduced susceptibility to fluoroquinolones in Salmonella enterica serovar Typhi on the clinical response to ofloxacin therapy. Plos Neglected Tropical Diseases. 5: e1163. PMID 21713025 DOI: 10.1371/journal.pntd.0001163  0.045
2009 Le TM, Baker S, Le TP, Le TP, Cao TT, Tran TT, Nguyen VM, Campbell JI, Lam MY, Nguyen TH, Nguyen VV, Farrar J, Schultsz C. High prevalence of plasmid-mediated quinolone resistance determinants in commensal members of the Enterobacteriaceae in Ho Chi Minh City, Vietnam. Journal of Medical Microbiology. 58: 1585-92. PMID 19696153 DOI: 10.1099/jmm.0.010033-0  0.045
2018 Park SE, Pham DT, Boinett C, Wong VK, Pak GD, Panzner U, Espinoza LMC, von Kalckreuth V, Im J, Schütt-Gerowitt H, Crump JA, Breiman RF, Adu-Sarkodie Y, Owusu-Dabo E, Rakotozandrindrainy R, ... ... Baker S, et al. The phylogeography and incidence of multi-drug resistant typhoid fever in sub-Saharan Africa. Nature Communications. 9: 5094. PMID 30504848 DOI: 10.1038/s41467-018-07370-z  0.045
2022 Shankar C, Vasudevan K, Jacob JJ, Baker S, Isaac BJ, Neeravi AR, Sethuvel DPM, George B, Veeraraghavan B. Hybrid Plasmids Encoding Antimicrobial Resistance and Virulence Traits Among Hypervirulent ST2096 in India. Frontiers in Cellular and Infection Microbiology. 12: 875116. PMID 35573787 DOI: 10.3389/fcimb.2022.875116  0.045
2015 Thompson CN, Blacksell SD, Paris DH, Arjyal A, Karkey A, Dongol S, Giri A, Dolecek C, Day N, Baker S, Thwaites G, Farrar J, Basnyat B. Undifferentiated febrile illness in Kathmandu, Nepal. The American Journal of Tropical Medicine and Hygiene. 92: 875-8. PMID 25667056 DOI: 10.4269/ajtmh.14-0709  0.045
2018 Lu L, Van Dung N, Ivens A, Bogaardt C, O'Toole A, Bryant JE, Carrique-Mas J, Van Cuong N, Anh PH, Rabaa MA, Tue NT, Thwaites GE, Baker S, Simmonds P, Woolhouse ME, et al. Genetic diversity and cross-species transmission of kobuviruses in Vietnam. Virus Evolution. 4: vey002. PMID 29449965 DOI: 10.1093/Ve/Vey002  0.045
2010 Pollen DA, Baker S, Hinerfeld D, Swearer J, Evans BA, Evans JE, Caselli R, Rogaeva E, St George-Hyslop P, Moonis M. Prevention of Alzheimer's disease in high risk groups: statin therapy in subjects with PSEN1 mutations or heterozygosity for apolipoprotein E epsilon 4. Alzheimer's Research & Therapy. 2: 31. PMID 21062519 DOI: 10.1186/Alzrt55  0.045
2014 Parry CM, Thompson C, Vinh H, Chinh NT, Phuong le T, Ho VA, Hien TT, Wain J, Farrar JJ, Baker S. Risk factors for the development of severe typhoid fever in Vietnam. Bmc Infectious Diseases. 14: 73. PMID 24512443 DOI: 10.1186/1471-2334-14-73  0.045
2013 Trang NH, Nga TV, Campbell JI, Hiep NT, Farrar J, Baker S, Duy PT. The characterization of ESBL genes in Escherichia coli and Klebsiella pneumoniae causing nosocomial infections in Vietnam. Journal of Infection in Developing Countries. 7: 922-8. PMID 24334938  0.044
2014 Pham HA, Carrique-Mas JJ, Nguyen VC, Ngo TH, Nguyet LA, Do TD, Vo BH, Phan VT, Rabaa MA, Farrar J, Baker S, Bryant JE. The prevalence and genetic diversity of group A rotaviruses on pig farms in the Mekong Delta region of Vietnam. Veterinary Microbiology. 170: 258-65. PMID 24679960 DOI: 10.1016/J.Vetmic.2014.02.030  0.044
2014 Van Dung N, Anh PH, Van Cuong N, Hoa NT, Carrique-Mas J, Hien VB, Campbell J, Baker S, Farrar J, Woolhouse ME, Bryant JE, Simmonds P. Prevalence, genetic diversity and recombination of species G enteroviruses infecting pigs in Vietnam. The Journal of General Virology. 95: 549-56. PMID 24323635 DOI: 10.1099/Vir.0.061978-0  0.044
2013 Kolader ME, Vinh H, Ngoc Tuyet PT, Thompson C, Wolbers M, Merson L, Campbell JI, Ngoc Dung TT, Manh Tuan H, Vinh Chau NV, Farrar J, van Doorn HR, Baker S. An oral preparation of Lactobacillus acidophilus for the treatment of uncomplicated acute watery diarrhoea in Vietnamese children: study protocol for a multicentre, randomised, placebo-controlled trial. Trials. 14: 27. PMID 23356823 DOI: 10.1186/1745-6215-14-27  0.044
2019 Nguyen-Hoang TP, Nguyen Hoa T, Nguyen TH, Baker S, Rahman M, Nguyen TV. Complete Genome Sequence of Helicobacter pylori Strain GD63, Isolated from a Vietnamese Patient with a Gastric Ulcer. Microbiology Resource Announcements. 8. PMID 30834368 DOI: 10.1128/MRA.01412-18  0.044
2019 Popoola O, Kehinde A, Ogunleye V, Adewusi OJ, Toy T, Mogeni OD, Aroyewun EO, Agbi S, Adekanmbi O, Adepoju A, Muyibi S, Adebiyi I, Elaturoti OO, Nwimo C, Adeoti H, ... ... Baker S, et al. Bacteremia Among Febrile Patients Attending Selected Healthcare Facilities in Ibadan, Nigeria. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 69: S466-S473. PMID 31665773 DOI: 10.1093/cid/ciz516  0.044
2017 Dung TTN, Duy PT, Sessions OM, Sangumathi UK, Phat VV, Tam PTT, To NTN, Phuc TM, Hong Chau TT, Chau NNM, Minh NN, Thwaites GE, Rabaa MA, Baker S. A universal genome sequencing method for rotavirus A from human fecal samples which identifies segment reassortment and multi-genotype mixed infection. Bmc Genomics. 18: 324. PMID 28438140 DOI: 10.1186/S12864-017-3714-6  0.044
2012 Emary K, Moore CE, Chanpheaktra N, An KP, Chheng K, Sona S, Duy PT, Nga TV, Wuthiekanun V, Amornchai P, Kumar V, Wijedoru L, Stoesser NE, Carter MJ, Baker S, et al. Enteric fever in Cambodian children is dominated by multidrug-resistant H58 Salmonella enterica serovar Typhi with intermediate susceptibility to ciprofloxacin. Transactions of the Royal Society of Tropical Medicine and Hygiene. 106: 718-24. PMID 23122884 DOI: 10.1016/j.trstmh.2012.08.007  0.044
2021 Argimón S, Yeats CA, Goater RJ, Abudahab K, Taylor B, Underwood A, Sánchez-Busó L, Wong VK, Dyson ZA, Nair S, Park SE, Marks F, Page AJ, Keane JA, Baker S, et al. A global resource for genomic predictions of antimicrobial resistance and surveillance of Salmonella Typhi at pathogenwatch. Nature Communications. 12: 2879. PMID 34001879 DOI: 10.1038/s41467-021-23091-2  0.044
2018 Thi Quynh Nhi L, Thanh Tuyen H, Duc Trung P, Do Hoang Nhu T, Duy PT, Hao CT, Thi Thanh Nhan N, Vi LL, Thi Diem Tuyet H, Thi Thuy Tien T, Van Vinh Chau N, Khanh Lam P, Thwaites G, Baker S. Excess body weight and age associated with the carriage of fluoroquinolone and third-generation cephalosporin resistance genes in commensal Escherichia coli from a cohort of urban Vietnamese children. Journal of Medical Microbiology. PMID 30113307 DOI: 10.1099/jmm.0.000820  0.043
2014 Pitzer VE, Bowles CC, Baker S, Kang G, Balaji V, Farrar JJ, Grenfell BT. Predicting the impact of vaccination on the transmission dynamics of typhoid in South Asia: a mathematical modeling study. Plos Neglected Tropical Diseases. 8: e2642. PMID 24416466 DOI: 10.1371/journal.pntd.0002642  0.043
2012 Koirala KD, Thanh DP, Thapa SD, Arjyal A, Karkey A, Dongol S, Shrestha UM, Farrar JJ, Basnyat B, Baker S. Highly resistant Salmonella enterica serovar Typhi with a novel gyrA mutation raises questions about the long-term efficacy of older fluoroquinolones for treating typhoid fever. Antimicrobial Agents and Chemotherapy. 56: 2761-2. PMID 22371897 DOI: 10.1128/AAC.06414-11  0.043
2021 Hefele L, Black AP, Van Tan T, Tri Minh N, Duc Hoang N, Virachith S, Muller CP, Hübschen JM, Russell P, Bartholdson Scott J, Ngoc Minh CN, Thieu Nga TV, Baker S. An age-stratified serosurvey against purified Salmonella enterica serovar Typhi antigens in the Lao People´s Democratic Republic. Plos Neglected Tropical Diseases. 15: e0010017. PMID 34898620 DOI: 10.1371/journal.pntd.0010017  0.043
2018 Hao WM, Baker S, Lincoln E, Hudson S, Lee SD, Lemieux P. Cesium emissions from laboratory fires. Journal of the Air & Waste Management Association (1995). PMID 29953328 DOI: 10.1080/10962247.2018.1493001  0.043
2014 Geppert C, Candilis P, Baker S, Lidz C, Appelbaum P, Fletcher K. Motivations of Patients with Diabetes to Participate in Research. Ajob Empirical Bioethics. 5: 14-21. PMID 25419533 DOI: 10.1080/23294515.2014.910282  0.043
2010 Nga TV, Karkey A, Dongol S, Thuy HN, Dunstan S, Holt K, Tu le TP, Campbell JI, Chau TT, Chau NV, Arjyal A, Koirala S, Basnyat B, Dolecek C, Farrar J, ... Baker S, et al. The sensitivity of real-time PCR amplification targeting invasive Salmonella serovars in biological specimens. Bmc Infectious Diseases. 10: 125. PMID 20492644 DOI: 10.1186/1471-2334-10-125  0.043
2024 Kean IRL, Clark JA, Zhang Z, Daubney E, White D, Ferrando-Vivas P, Milla G, Cuthbertson B, Pappachan J, Klein N, Mouncey P, Rowan K, Myburgh J, Gouliouris T, Baker S, et al. Short-duration selective decontamination of the digestive tract infection control does not contribute to increased antimicrobial resistance burden in a pilot cluster randomised trial (the ARCTIC Study). Gut. PMID 38253478 DOI: 10.1136/gutjnl-2023-330851  0.042
2011 Karavolos MH, Bulmer DM, Spencer H, Rampioni G, Schmalen I, Baker S, Pickard D, Gray J, Fookes M, Winzer K, Ivens A, Dougan G, Williams P, Khan CM. Salmonella Typhi sense host neuroendocrine stress hormones and release the toxin haemolysin E. Embo Reports. 12: 252-8. PMID 21331094 DOI: 10.1038/embor.2011.4  0.042
2021 Anh NT, Nhu LNT, Hong NTT, Phuc TM, Tam PTT, Huong DT, Anh TT, Deng X, Nghia HDT, Nguyen TT, Van Hung N, Thuan ND, Phuong PTH, Chau NVV, Baker S, et al. Viral Metagenomic Analysis of Cerebrospinal Fluid from Patients with Acute Central Nervous System Infections of Unknown Origin, Vietnam. Emerging Infectious Diseases. 27: 205-213. PMID 33350920 DOI: 10.3201/eid2701.202723  0.042
2009 Baker S, Lauro C, Sintim-Damoa A. Malpractice allegations and apology laws: benefits and risks for radiologists. Journal of the American College of Radiology : Jacr. 5: 1186-90. PMID 19027681 DOI: 10.1016/j.jacr.2008.08.003  0.042
2009 Vinh H, Baker S, Campbell J, Hoang NV, Loan HT, Chinh MT, Anh VT, Diep TS, Phuong le T, Schultsz C, Farrar J. Rapid emergence of third generation cephalosporin resistant Shigella spp. in Southern Vietnam. Journal of Medical Microbiology. 58: 281-3. PMID 19141753 DOI: 10.1099/jmm.0.002949-0  0.042
2023 Siniarski A, Baker SR, Stępień K, Woźniak A, Ariëns R, Gajos G. Left atrial size and volume are associated with fibrin clot ultrastructure in patients with acute myocardial infarction. Polish Archives of Internal Medicine. 133. PMID 38088818 DOI: 10.20452/pamw.16625  0.042
2009 Saborit JM, Aquilina NJ, Meddings C, Baker S, Vardoulakis S, Harrison RM. Measurement of personal exposure to volatile organic compounds and particle associated PAH in three UK regions. Environmental Science & Technology. 43: 4582-8. PMID 19603680 DOI: 10.1021/ES9005042  0.042
2019 Weinert LA, Chaudhuri RR, Wang J, Peters SE, Corander J, Jombart T, Baig A, Howell KJ, Vehkala M, Välimäki N, Harris D, Chieu TTB, Van Vinh Chau N, Campbell J, Schultsz C, ... ... Baker S, et al. Publisher Correction: Genomic signatures of human and animal disease in the zoonotic pathogen Streptococcus suis. Nature Communications. 10: 5326. PMID 31757940 DOI: 10.1038/S41467-019-13138-W  0.042
2014 Moore CE, Pan-Ngum W, Wijedoru LP, Sona S, Nga TV, Duy PT, Vinh PV, Chheng K, Kumar V, Emary K, Carter M, White L, Baker S, Day NP, Parry CM. Evaluation of the diagnostic accuracy of a typhoid IgM flow assay for the diagnosis of typhoid fever in Cambodian children using a Bayesian latent class model assuming an imperfect gold standard. The American Journal of Tropical Medicine and Hygiene. 90: 114-20. PMID 24218407 DOI: 10.4269/ajtmh.13-0384  0.042
2021 Mylona E, Voong Vinh P, Qureshi S, Karkey A, Dongol S, Ha Thanh T, Walson J, Ballell L, Fernández Álvaro E, Qamar F, Baker S. Tebipenem as an oral alternative for the treatment of typhoid caused by XDR Salmonella Typhi. The Journal of Antimicrobial Chemotherapy. 76: 3197-3200. PMID 34534310 DOI: 10.1093/jac/dkab326  0.042
2003 Baker SR. The emergency suite and the end of geography. Emergency Radiology. 10: 1-2. PMID 15290521 DOI: 10.1007/s10140-002-0267-y  0.042
2016 Park SE, Pak GD, Aaby P, Adu-Sarkodie Y, Ali M, Aseffa A, Biggs HM, Bjerregaard-Andersen M, Breiman RF, Crump JA, Cruz Espinoza LM, Eltayeb MA, Gasmelseed N, Hertz JT, Im J, ... ... Baker S, et al. The Relationship Between Invasive Nontyphoidal Salmonella Disease, Other Bacterial Bloodstream Infections, and Malaria in Sub-Saharan Africa. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 62: S23-31. PMID 26933016 DOI: 10.1093/cid/civ893  0.042
2021 Maes M, Higginson E, Pereira-Dias J, Curran MD, Parmar S, Khokhar F, Cuchet-Lourenço D, Lux J, Sharma-Hajela S, Ravenhill B, Hamed I, Heales L, Mahroof R, Solderholm A, Forrest S, ... ... Baker S, et al. Ventilator-associated pneumonia in critically ill patients with COVID-19. Critical Care (London, England). 25: 25. PMID 33430915 DOI: 10.1186/s13054-021-03460-5  0.041
2008 Baker S, Campbell JI, Stabler R, Nguyen HV, To DS, Nguyen DV, Farrar J. Fatal wound infection caused by Chromobacterium violaceum in Ho Chi Minh City, Vietnam. Journal of Clinical Microbiology. 46: 3853-5. PMID 18799697 DOI: 10.1128/JCM.01068-08  0.041
2012 Seth-Smith HMB, Fookes MC, Okoro CK, Baker S, Harris SR, Scott P, Pickard D, Quail MA, Churcher C, Sanders M, Harmse J, Dougan G, Parkhill J, Thomson NR. Structure, diversity, and mobility of the salmonella pathogenicity island 7 family of integrative and conjugative elements within enterobacteriaceae Journal of Bacteriology. 194: 1494-1504. PMID 22247511 DOI: 10.1128/JB.06403-11  0.041
2012 Nga TV, Parry CM, Le T, Lan NP, Diep TS, Campbell JI, Hoang NV, Dung le T, Wain J, Dolecek C, Farrar JJ, Chau NV, Hien TT, Day JN, Baker S. The decline of typhoid and the rise of non-typhoid salmonellae and fungal infections in a changing HIV landscape: bloodstream infection trends over 15 years in southern Vietnam. Transactions of the Royal Society of Tropical Medicine and Hygiene. 106: 26-34. PMID 22137537 DOI: 10.1016/j.trstmh.2011.10.004  0.041
2023 Pereira-Dias J, Taneja N, Mahindroo J, Maheshwari G, Patel PJ, Thu TNH, Keane J, Dyson ZA, Baker S, Mylona E. The genomic characterization of Paratyphi A from an outbreak of enteric fever in Vadodara, India. Microbial Genomics. 9. PMID 36748526 DOI: 10.1099/mgen.0.000914  0.041
2013 Luk L, Baker SR. After-hours coverage of various radiologic subspecialties and its impact on the fourth-year radiology residency curriculum. Academic Radiology. 20: 122-7. PMID 22929648 DOI: 10.1016/j.acra.2012.05.021  0.041
2010 Baker S, Hanage WP, Holt KE. Navigating the future of bacterial molecular epidemiology. Current Opinion in Microbiology. 13: 640-5. PMID 20846899 DOI: 10.1016/j.mib.2010.08.002  0.041
2021 Maes M, Dyson ZA, Smith SE, Goulding DA, Ludden C, Baker S, Kellam P, Reece ST, Dougan G, Bartholdson Scott J. Publisher Correction: A novel therapeutic antibody screening method using bacterial high-content imaging reveals functional antibody binding phenotypes of Escherichia coli ST131. Scientific Reports. 11: 7366. PMID 33772104 DOI: 10.1038/s41598-021-86902-y  0.041
2019 Baker S, Ali M, Deerin JF, Eltayeb MA, Cruz Espinoza LM, Gasmelseed N, Im J, Panzner U, Kalckreuth VV, Keddy KH, Pak GD, Park JK, Park SE, Sooka A, Sow AG, et al. The Typhoid Fever Surveillance in Africa Program: Geospatial Sampling Frames for Household-based Studies: Lessons Learned From a Multicountry Surveillance Network in Senegal, South Africa, and Sudan. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 69: S474-S482. PMID 31665783 DOI: 10.1093/cid/ciz755  0.041
2015 Weinert LA, Chaudhuri RR, Wang J, Peters SE, Corander J, Jombart T, Baig A, Howell KJ, Vehkala M, Välimäki N, Harris D, Chieu TT, Van Vinh Chau N, Campbell J, Schultsz C, ... ... Baker S, et al. Erratum: Genomic signatures of human and animal disease in the zoonotic pathogen Streptococcus suis. Nature Communications. 6: 7272. PMID 25966020 DOI: 10.1038/ncomms8272  0.041
2009 Campbell JI, Lam TM, Huynh TL, To SD, Tran TT, Nguyen VM, Le TS, Nguyen vV, Parry C, Farrar JJ, Tran TH, Baker S. Microbiologic characterization and antimicrobial susceptibility of Clostridium tetani isolated from wounds of patients with clinically diagnosed tetanus. The American Journal of Tropical Medicine and Hygiene. 80: 827-31. PMID 19407132  0.041
2017 Darton TC, Zhou L, Blohmke CJ, Jones C, Waddington CS, Baker S, Pollard AJ. Blood culture-PCR to optimise typhoid fever diagnosis after controlled human infection identifies frequent asymptomatic cases and evidence of primary bacteraemia. The Journal of Infection. PMID 28130144 DOI: 10.1016/j.jinf.2017.01.006  0.041
2018 Napolitani G, Kurupati P, Teng KWW, Gibani MM, Rei M, Aulicino A, Preciado-Llanes L, Wong MT, Becht E, Howson L, de Haas P, Salio M, Blohmke CJ, Olsen LR, Pinto DMS, ... ... Baker S, et al. Clonal analysis of Salmonella-specific effector T cells reveals serovar-specific and cross-reactive T cell responses. Nature Immunology. PMID 29925993 DOI: 10.1038/S41590-018-0133-Z  0.041
2013 Andrews JR, Prajapati KG, Eypper E, Shrestha P, Shakya M, Pathak KR, Joshi N, Tiwari P, Risal M, Koirala S, Karkey A, Dongol S, Wen S, Smith AB, Maru D, ... ... Baker S, et al. Evaluation of an electricity-free, culture-based approach for detecting typhoidal Salmonella bacteremia during enteric fever in a high burden, resource-limited setting. Plos Neglected Tropical Diseases. 7: e2292. PMID 23853696 DOI: 10.1371/Journal.Pntd.0002292  0.041
2011 Vinh H, Anh VT, Anh ND, Campbell JI, Hoang NV, Nga TV, Nhu NT, Minh PV, Thuy CT, Duy PT, Phuong le T, Loan HT, Chinh MT, Thao NT, Tham NT, ... ... Baker S, et al. A multi-center randomized trial to assess the efficacy of gatifloxacin versus ciprofloxacin for the treatment of shigellosis in Vietnamese children. Plos Neglected Tropical Diseases. 5: e1264. PMID 21829747 DOI: 10.1371/journal.pntd.0001264  0.041
2014 Hansberry DR, John A, John E, Agarwal N, Gonzales SF, Baker SR. A critical review of the readability of online patient education resources from RadiologyInfo.Org. Ajr. American Journal of Roentgenology. 202: 566-75. PMID 24555593 DOI: 10.2214/Ajr.13.11223  0.04
2016 Karkey A, Jombart T, Walker AW, Thompson CN, Torres A, Dongol S, Tran Vu Thieu N, Pham Thanh D, Tran Thi Ngoc D, Voong Vinh P, Singer AC, Parkhill J, Thwaites G, Basnyat B, Ferguson N, ... Baker S, et al. The Ecological Dynamics of Fecal Contamination and Salmonella Typhi and Salmonella Paratyphi A in Municipal Kathmandu Drinking Water. Plos Neglected Tropical Diseases. 10: e0004346. PMID 26735696 DOI: 10.1371/journal.pntd.0004346  0.04
2017 Karkey A, Thwaites GE, Baker S. The evolution of antimicrobial resistance in Salmonella Typhi. Current Opinion in Gastroenterology. PMID 29059070 DOI: 10.1097/MOG.0000000000000406  0.04
2010 Chau TT, Mai NH, Phu NH, Nghia HD, Chuong LV, Sinh DX, Duong VA, Diep PT, Campbell JI, Baker S, Hien TT, Lalloo DG, Farrar JJ, Day JN. A prospective descriptive study of cryptococcal meningitis in HIV uninfected patients in Vietnam - high prevalence of Cryptococcus neoformans var grubii in the absence of underlying disease. Bmc Infectious Diseases. 10: 199. PMID 20618932 DOI: 10.1186/1471-2334-10-199  0.04
2022 Fernández Alvaro E, Voong Vinh P, de Cozar C, Wille D, Urones B, Cortés A, Price A, Tran Do Hoang N, Ha Thanh T, McCloskey M, Shaheen S, Dayao D, de Mercado J, Castañeda P, García-Perez A, ... ... Baker S, et al. The repurposing of Tebipenem pivoxil as alternative therapy for severe gastrointestinal infections caused by extensively drug resistant spp. Elife. 11. PMID 35289746 DOI: 10.7554/eLife.69798  0.04
2023 Johnston PI, Bogue P, Chirambo AC, Mbewe M, Prakash R, Kandoole-Kabwere V, Lester R, Darton T, Baker S, Gordon MA, Meiring JE. Bacterial shedding and serologic responses following an outbreak of Salmonella Typhi in an endemic cohort. Bmc Infectious Diseases. 23: 416. PMID 37340341 DOI: 10.1186/s12879-023-08385-8  0.04
2015 Thompson CN, Thieu NT, Vinh PV, Duc AN, Wolbers M, Vinh H, Campbell JI, Ngoc DT, Hoang NV, Thanh TH, The HC, Nguyen TN, Lan NP, Parry CM, Chau NV, ... ... Baker S, et al. Clinical implications of reduced susceptibility to fluoroquinolones in paediatric Shigella sonnei and Shigella flexneri infections. The Journal of Antimicrobial Chemotherapy. PMID 26679253 DOI: 10.1093/jac/dkv400  0.04
2011 Day JN, Hoang TN, Duong AV, Hong CT, Diep PT, Campbell JI, Sieu TP, Hien TT, Bui T, Boni MF, Lalloo DG, Carter D, Baker S, Farrar JJ. Most cases of cryptococcal meningitis in HIV-uninfected patients in Vietnam are due to a distinct amplified fragment length polymorphism-defined cluster of Cryptococcus neoformans var. grubii VN1. Journal of Clinical Microbiology. 49: 658-64. PMID 21159929 DOI: 10.1128/Jcm.01985-10  0.04
2016 Leung JM, Hong CT, Trung NH, Thi HN, Minh CN, Thi TV, Hong DT, Man DN, Knowles SC, Wolbers M, Hoang NL, Thwaites G, Graham AL, Baker S. The impact of albendazole treatment on the incidence of viral- and bacterial-induced diarrhea in school children in southern Vietnam: study protocol for a randomized controlled trial. Trials. 17: 279. PMID 27266697 DOI: 10.1186/S13063-016-1406-1  0.04
2023 Sapkota J, Roberts T, Basnyat B, Baker S, Hampton LM, Dittrich S. Diagnostics for Typhoid Fever: Current Perspectives and Future Outlooks for Product Development and Access. Open Forum Infectious Diseases. 10: S17-S20. PMID 37274534 DOI: 10.1093/ofid/ofad120  0.04
2018 Andrews JR, Baker S, Marks F, Alsan M, Garrett D, Gellin BG, Saha SK, Qamar FN, Yousafzai MT, Bogoch II, Antillon M, Pitzer VE, Kim JH, John J, Gauld J, et al. Typhoid conjugate vaccines: a new tool in the fight against antimicrobial resistance. The Lancet. Infectious Diseases. PMID 30170987 DOI: 10.1016/S1473-3099(18)30350-5  0.04
2017 Nhat NTD, Todd S, de Bruin E, Thao TTN, Vy NHT, Quan TM, Vinh DN, van Beek J, Anh PH, Lam HM, Hung NT, Thanh NTL, Huy HLA, Ha VTH, Baker S, et al. Structure of general-population antibody titer distributions to influenza A virus. Scientific Reports. 7: 6060. PMID 28729702 DOI: 10.1038/S41598-017-06177-0  0.039
2009 Baker SR, Hsieh YH, Maldjian PD, Scanlan MT. Inadvertent thyroid irradiation in protocol-driven trauma CT: a survey of hospital ERs. Emergency Radiology. 16: 203-7. PMID 19132426 DOI: 10.1007/s10140-008-0784-4  0.039
2013 Campbell JI, Lan NP, Qui PT, Dung le T, Farrar JJ, Baker S. A successful antimicrobial regime for Chromobacterium violaceum induced bacteremia. Bmc Infectious Diseases. 13: 4. PMID 23286235 DOI: 10.1186/1471-2334-13-4  0.039
2013 Baker SR, Noorelahi YM, Ghosh S, Yang LC, Kasper DJ. History of metaphoric signs in radiology. European Journal of Radiology. 82: 1584-7. PMID 23684947 DOI: 10.1016/j.ejrad.2013.04.005  0.039
2015 Van Cuong N, Carrique-Mas J, Vo Be H, An NN, Tue NT, Anh NL, Anh PH, Phuc NT, Baker S, Voutilainen L, Jääskeläinen A, Huhtamo E, Utriainen M, Sironen T, Vaheri A, et al. Rodents and risk in the Mekong Delta of Vietnam: seroprevalence of selected zoonotic viruses in rodents and humans. Vector Borne and Zoonotic Diseases (Larchmont, N.Y.). 15: 65-72. PMID 25629782 DOI: 10.1089/Vbz.2014.1603  0.039
2018 Jeon HJ, Pak GD, Im J, Owusu-Dabo E, Adu-Sarkodie Y, Gassama Sow A, Bassiahi AS, Gasmelseed N, Keddy KH, Bjerregaard-Andersen M, Konings F, Aseffa A, Crump JA, Chon Y, Breiman RF, ... ... Baker S, et al. What is the best immunization strategy for protecting African children against invasive Salmonella disease? Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 29746615 DOI: 10.1093/cid/ciy386  0.039
2019 Le Ngoc C, Tran Thi Thanh T, Tran Thi Lan P, Nguyen Mai T, Nguyen Hoa T, Nghiem My N, Le Van T, Le Manh H, Le Thanh P, Nguyen Van Vinh C, Thwaites G, Cooke G, Heilek GM, Shikuma C, Le T, ... Baker S, et al. Differential prevalence and geographic distribution of hepatitis C virus genotypes in acute and chronic hepatitis C patients in Vietnam. Plos One. 14: e0212734. PMID 30865664 DOI: 10.1371/journal.pone.0212734  0.039
2021 Shakya M, Voysey M, Theiss-Nyland K, Colin-Jones R, Pant D, Adhikari A, Tonks S, Mujadidi YF, O'Reilly P, Mazur O, Kelly S, Liu X, Maharjan A, Dahal A, Haque N, ... ... Baker S, et al. Efficacy of typhoid conjugate vaccine in Nepal: final results of a phase 3, randomised, controlled trial. The Lancet. Global Health. 9: e1561-e1568. PMID 34678198 DOI: 10.1016/S2214-109X(21)00346-6  0.039
2022 Fernández Álvaro E, Voong Vinh P, de Cozar C, Willé DR, Urones B, Cortés A, Price A, Tran Do Hoang N, Ha Thanh T, McCloskey M, Shaheen S, Dayao D, Martinot A, de Mercado J, Castañeda P, ... ... Baker S, et al. Correction: The repurposing of Tebipenem pivoxil as alternative therapy for severe gastrointestinal infections caused by extensively drug-resistant spp. Elife. 11. PMID 36063387 DOI: 10.7554/eLife.83117  0.039
2020 Manandhar S, Zellweger RM, Maharjan N, Dongol S, Prajapati KG, Thwaites G, Basnyat B, Dixit SM, Baker S, Karkey A. A high prevalence of multi-drug resistant Gram-negative bacilli in a Nepali tertiary care hospital and associated widespread distribution of Extended-Spectrum Beta-Lactamase (ESBL) and carbapenemase-encoding genes. Annals of Clinical Microbiology and Antimicrobials. 19: 48. PMID 33087115 DOI: 10.1186/s12941-020-00390-y  0.039
2023 Clark JA, Conway Morris A, Kanaris C, Inwald D, Butt W, Osowicki J, Schlapbach LJ, Curran MD, White D, Daubney E, Agrawal S, Navapurkar V, Török ME, Baker S, Pathan N. A qualitative investigation of paediatric intensive care staff attitudes towards the diagnosis of lower respiratory tract infection in the molecular diagnostics era. Intensive Care Medicine. Paediatric and Neonatal. 1: 10. PMID 37425493 DOI: 10.1007/s44253-023-00008-z  0.039
2019 Yeung A, Hale C, Clare S, Palmer S, Bartholdson Scott J, Baker S, Dougan G. Using a Systems Biology Approach To Study Host-Pathogen Interactions. Microbiology Spectrum. 7. PMID 30953425 DOI: 10.1128/microbiolspec.BAI-0021-2019  0.038
2013 My PV, Thompson C, Phuc HL, Tuyet PT, Vinh H, Hoang NV, Minh PV, Vinh NT, Thuy CT, Nga TT, Hau NT, Campbell J, Chinh NT, Thuong TC, Tuan HM, ... ... Baker S, et al. Endemic norovirus infections in children, Ho Chi Minh City, Vietnam, 2009-2010. Emerging Infectious Diseases. 19: 977-80. PMID 23735160 DOI: 10.3201/eid1906.111862  0.038
2016 Phu Huong Lan N, Le Thi Phuong T, Nguyen Huu H, Thuy L, Mather AE, Park SE, Marks F, Thwaites GE, Van Vinh Chau N, Thompson CN, Baker S. Invasive Non-typhoidal Salmonella Infections in Asia: Clinical Observations, Disease Outcome and Dominant Serovars from an Infectious Disease Hospital in Vietnam. Plos Neglected Tropical Diseases. 10: e0004857. PMID 27513951 DOI: 10.1371/journal.pntd.0004857  0.038
2011 Kurian EM, Caporelli ML, Baker S, Woda B, Cosar EF, Hutchinson L. Cervista HR and HPV 16/18 assays vs hybrid capture 2 assay: outcome comparison in women with negative cervical cytology. American Journal of Clinical Pathology. 136: 808-16. PMID 22031321 DOI: 10.1309/AJCPCQD7B7DPVHLH  0.038
2023 Higham SL, Baker S, Flight KE, Krishna A, Kellam P, Reece ST, Tregoning JS. Intranasal immunisation with Outer Membrane Vesicles (OMV) protects against airway colonisation and systemic infection with Acinetobacter baumannii. The Journal of Infection. PMID 36858180 DOI: 10.1016/j.jinf.2023.02.035  0.038
2014 Hansberry DR, Ramchand T, Patel S, Kraus C, Jung J, Agarwal N, Gonzales SF, Baker SR. Are we failing to communicate? Internet-based patient education materials and radiation safety. European Journal of Radiology. 83: 1698-702. PMID 24968965 DOI: 10.1016/J.Ejrad.2014.04.013  0.037
2023 Shrestha N, Manandhar S, Maharjan N, Twati D, Dongol S, Basnyat B, Baker S, Karkey A. Perspectives of pharmacy employees on an inappropriate use of antimicrobials in Kathmandu, Nepal. Plos One. 18: e0285287. PMID 37134062 DOI: 10.1371/journal.pone.0285287  0.037
2021 Giri A, Karkey A, Dongol S, Arjyal A, Maharjan A, Veeraraghavan B, Paudyal B, Dolecek C, Gajurel D, Phuong DNT, Thanh DP, Qamar F, Kang G, Hien HV, John J, ... ... Baker S, et al. Azithromycin and cefixime combination versus azithromycin alone for the out-patient treatment of clinically suspected or confirmed uncomplicated typhoid fever in South Asia: a randomised controlled trial protocol. Wellcome Open Research. 6: 207. PMID 35097222 DOI: 10.12688/wellcomeopenres.16801.1  0.037
2019 Shakya M, Colin-Jones R, Theiss-Nyland K, Voysey M, Pant D, Smith N, Liu X, Tonks S, Mazur O, Farooq YG, Clarke J, Hill J, Adhikari A, Dongol S, Karkey A, ... ... Baker S, et al. Phase 3 Efficacy Analysis of a Typhoid Conjugate Vaccine Trial in Nepal. The New England Journal of Medicine. 381: 2209-2218. PMID 31800986 DOI: 10.1056/NEJMoa1905047  0.037
2023 Maes M, Khokhar F, Wilkinson SAJ, Smith AD, Kovalenko G, Dougan G, Quick J, Loman NJ, Baker S, Curran MD, Skittrall JP, Houldcroft CJ. Multiplex MinION sequencing suggests enteric adenovirus F41 genetic diversity comparable to pre-COVID-19 era. Microbial Genomics. 9. PMID 36748435 DOI: 10.1099/mgen.0.000920  0.037
2005 Baker SR, Merkulov A. The radiology assistant: a contrarian's view. Emergency Radiology. 11: 187-92. PMID 16133603 DOI: 10.1007/s10140-005-0400-9  0.037
2013 Tan le V, van Doorn HR, Nghia HD, Chau TT, Tu le TP, de Vries M, Canuti M, Deijs M, Jebbink MF, Baker S, Bryant JE, Tham NT, BKrong NT, Boni MF, Loi TQ, et al. Identification of a new cyclovirus in cerebrospinal fluid of patients with acute central nervous system infections. Mbio. 4: e00231-13. PMID 23781068 DOI: 10.1128/Mbio.00231-13  0.037
2023 Nhung NT, Dutta A, Higginson E, Kermack L, Yen NTP, Phu DH, Kiet BT, Choisy M, Geskus RB, Baker S, Carrique-Mas J. Impact of antimicrobial use on abundance of antimicrobial resistance genes in chicken flocks in Vietnam. Jac-Antimicrobial Resistance. 5: dlad090. PMID 37484028 DOI: 10.1093/jacamr/dlad090  0.037
2010 Parry CM, Thuy CT, Dongol S, Karkey A, Vinh H, Chinh NT, Duy PT, Thieu Nga TV, Campbell JI, Van Minh Hoang N, Arjyal A, Bhutta ZA, Bhattacharya SK, Agtini MD, Dong B, ... ... Baker S, et al. Suitable disk antimicrobial susceptibility breakpoints defining Salmonella enterica serovar Typhi isolates with reduced susceptibility to fluoroquinolones. Antimicrobial Agents and Chemotherapy. 54: 5201-8. PMID 20837759 DOI: 10.1128/AAC.00963-10  0.037
2008 Li JM, Eslami MH, Rohrer MJ, Dargon P, Joris I, Hendricks G, Baker S, Cutler BS. Interleukin 18 binding protein (IL18-BP) inhibits neointimal hyperplasia after balloon injury in an atherosclerotic rabbit model Journal of Vascular Surgery. 47: 1048-1057. PMID 18455646 DOI: 10.1016/j.jvs.2007.12.005  0.036
2022 Bonin K, Prasad S, Caulkins W, Holzwarth G, Baker SR, Vidi PA. Three-dimensional tracking using a single-spot rotating point spread function created by a multiring spiral phase plate. Journal of Biomedical Optics. 27: 126501. PMID 36590978 DOI: 10.1117/1.JBO.27.12.126501  0.036
2022 Maes M, Sikorski MJ, Carey ME, Higginson EE, Dyson ZA, Fernandez A, Araya P, Tennant SM, Baker S, Lagos R, Hormazábal JC, Levine MM, Dougan G. Whole genome sequence analysis of Salmonella Typhi provides evidence of phylogenetic linkage between cases of typhoid fever in Santiago, Chile in the 1980s and 2010-2016. Plos Neglected Tropical Diseases. 16: e0010178. PMID 35767580 DOI: 10.1371/journal.pntd.0010178  0.036
2016 von Kalckreuth V, Konings F, Aaby P, Adu-Sarkodie Y, Ali M, Aseffa A, Baker S, Breiman RF, Bjerregaard-Andersen M, Clemens JD, Crump JA, Cruz Espinoza LM, Deerin JF, Gasmelseed N, Sow AG, et al. The Typhoid Fever Surveillance in Africa Program (TSAP): Clinical, Diagnostic, and Epidemiological Methodologies. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 62: S9-S16. PMID 26933028 DOI: 10.1093/cid/civ693  0.036
2003 Lee HJ, Jilani M, Frohman L, Baker S. CT of orbital trauma. Emergency Radiology. 10: 168-72. PMID 15290482 DOI: 10.1007/s10140-003-0282-7  0.036
2019 Blohmke CJ, Muller J, Gibani MM, Dobinson H, Shrestha S, Perinparajah S, Jin C, Hughes H, Blackwell L, Dongol S, Karkey A, Schreiber F, Pickard D, Basnyat B, Dougan G, ... Baker S, et al. Diagnostic host gene signature for distinguishing enteric fever from other febrile diseases. Embo Molecular Medicine. e10431. PMID 31468702 DOI: 10.15252/emmm.201910431  0.036
2018 Phan MVT, Ngo Tri T, Hong Anh P, Baker S, Kellam P, Cotten M. Identification and characterization of Coronaviridae genomes from Vietnamese bats and rats based on conserved protein domains. Virus Evolution. 4: vey035. PMID 30568804 DOI: 10.1093/Ve/Vey035  0.036
2021 Maes M, Higginson E, Pereira-Dias J, Curran MD, Parmar S, Khokhar F, Cuchet-Lourenço D, Lux J, Sharma-Hajela S, Ravenhill B, Hamed I, Heales L, Mahroof R, Soderholm A, Forrest S, ... ... Baker S, et al. Correction to: Ventilator-associated pneumonia in critically ill patients with COVID-19. Critical Care (London, England). 25: 130. PMID 33823901 DOI: 10.1186/s13054-021-03560-2  0.036
2010 Liu G, Dou S, Baker S, Akalin A, Cheng D, Chen L, Rusckowski M, Hnatowich DJ. A preclinical 188Re tumor therapeutic investigation using MORF/cMORF pretargeting and an antiTAG-72 antibody CC49. Cancer Biology & Therapy. 10: 767-74. PMID 21099368 DOI: 10.4161/cbt.10.8.12879  0.035
2009 Delgado-Saborit JM, Aquilina NJ, Meddings C, Baker S, Harrison RM. Model development and validation of personal exposure to volatile organic compound concentrations. Environmental Health Perspectives. 117: 1571-9. PMID 20019908 DOI: 10.1289/ehp.0900561  0.035
2022 Tanmoy AM, Hooda Y, Sajib MSI, da Silva KE, Iqbal J, Qamar FN, Luby SP, Dougan G, Dyson ZA, Baker S, Garrett DO, Andrews JR, Saha SK, Saha S. Paratype: a genotyping tool for Salmonella Paratyphi A reveals its global genomic diversity. Nature Communications. 13: 7912. PMID 36564386 DOI: 10.1038/s41467-022-35587-6  0.035
2023 Carey ME, Dyson ZA, Ingle DJ, Amir A, Aworh MK, Chattaway MA, Chew KL, Crump JA, Feasey NA, Howden BP, Keddy KH, Maes M, Parry CM, Van Puyvelde S, Webb HE, ... ... Baker S, et al. Global diversity and antimicrobial resistance of typhoid fever pathogens: Insights from a meta-analysis of 13,000 Typhi genomes. Elife. 12. PMID 37697804 DOI: 10.7554/eLife.85867  0.035
2014 Cotten M, Petrova V, Phan MV, Rabaa MA, Watson SJ, Ong SH, Kellam P, Baker S. Deep sequencing of norovirus genomes defines evolutionary patterns in an urban tropical setting. Journal of Virology. 88: 11056-69. PMID 25056894 DOI: 10.1128/Jvi.01333-14  0.035
2016 Baker S, Hombach J, Marks F. What Have We Learned From the Typhoid Fever Surveillance in Africa Program? Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. S1-3. PMID 26933014 DOI: 10.1093/cid/civ675  0.035
2010 Baker SR, Tholany JJ, Hsieh YH. Demographic changes in radiology residency positions 1980-2007: the divergence between California and the rest of the United States. Ajr. American Journal of Roentgenology. 194: 178-84. PMID 20028921 DOI: 10.2214/AJR.09.3012  0.035
2009 Baker SR, Romero MJ, Patel A, Maaty M. Internal and external moonlighting by radiology trainees: a survey of the extent of participation by current residents and fellows. Academic Radiology. 16: 1029-33. PMID 19446476 DOI: 10.1016/j.acra.2009.02.022  0.035
2021 Meiring JE, Shakya M, Khanam F, Voysey M, Phillips MT, Tonks S, Thindwa D, Darton TC, Dongol S, Karkey A, Zaman K, Baker S, Dolecek C, Dunstan SJ, Dougan G, et al. Burden of enteric fever at three urban sites in Africa and Asia: a multicentre population-based study. The Lancet. Global Health. 9: e1688-e1696. PMID 34798028 DOI: 10.1016/S2214-109X(21)00370-3  0.035
2002 Morse AN, Hammer RA, Walter AJ, Baker S, Magtibay PM. Does hysterectomy without adnexectomy in patients with prior tubal interruption increase the risk of subsequent hydrosalpinx? American Journal of Obstetrics and Gynecology. 187: 1483-5; discussion 1. PMID 12501050  0.035
2018 Bate J, Baker S, Breuer J, Chisholm JC, Gray J, Hambleton S, Houlton A, Jit M, Lowis S, Makin G, O'Sullivan C, Patel SR, Phillips R, Ransinghe N, Ramsay ME, et al. PEPtalk2: results of a pilot randomised controlled trial to compare VZIG and aciclovir as postexposure prophylaxis (PEP) against chickenpox in children with cancer. Archives of Disease in Childhood. PMID 29730641 DOI: 10.1136/archdischild-2017-314212  0.035
2020 Duy PT, Dongol S, Giri A, Nguyen To NT, Dan Thanh HN, Nhu Quynh NP, Duc Trung P, Thwaites GE, Basnyat B, Baker S, Rabaa MA, Karkey A. The emergence of azithromycin-resistant Typhi in Nepal. Jac-Antimicrobial Resistance. 2: dlaa109. PMID 34223059 DOI: 10.1093/jacamr/dlaa109  0.034
2021 Phillips MT, Meiring JE, Voysey M, Warren JL, Baker S, Basnyat B, Clemens JD, Dolecek C, Dunstan SJ, Dougan G, Gordon MA, Thindwa D, Heyderman RS, Holt KE, Qadri F, et al. A Bayesian approach for estimating typhoid fever incidence from large-scale facility-based passive surveillance data. Statistics in Medicine. PMID 34428309 DOI: 10.1002/sim.9159  0.034
2021 Wain J, Simpson JA, Luong TDN, To SD, Pham TD, Baker S, Day NPJ, White NJ, Parry CM. Bactericidal activities and post-antibiotic effects of ofloxacin and ceftriaxone against drug-resistant Salmonella enterica serovar Typhi. The Journal of Antimicrobial Chemotherapy. PMID 34179968 DOI: 10.1093/jac/dkab215  0.034
2020 Carrique-Mas JJ, Choisy M, Van Cuong N, Thwaites G, Baker S. An estimation of total antimicrobial usage in humans and animals in Vietnam. Antimicrobial Resistance and Infection Control. 9: 16. PMID 31956405 DOI: 10.1186/s13756-019-0671-7  0.034
2008 Baker SR, Tilak GS, Thakur U. Critique of the transitional year internship and its relationship to radiology residency. Academic Radiology. 15: 662-8. PMID 18423324 DOI: 10.1016/j.acra.2007.12.006  0.034
2017 Dyson ZA, Thanh DP, Bodhidatta L, Mason CJ, Srijan A, Rabaa MA, Vinh PV, Thanh TH, Thwaites GE, Baker S, Holt KE. Whole Genome Sequence Analysis of Salmonella Typhi Isolated in Thailand before and after the Introduction of a National Immunization Program. Plos Neglected Tropical Diseases. 11: e0005274. PMID 28060810 DOI: 10.1371/journal.pntd.0005274  0.034
2013 Whang JS, Baker SR, Patel R, Luk L, Castro A. The causes of medical malpractice suits against radiologists in the United States. Radiology. 266: 548-54. PMID 23204547 DOI: 10.1148/radiol.12111119  0.034
2022 Cooper DJ, Lear S, Sithole N, Shaw A, Stark H, Ferris M, Bradley J, Maxwell P, Goodfellow I, Weekes MP, Seaman S, Baker S. Demographic, behavioural and occupational risk factors associated with SARS-CoV-2 infection in UK healthcare workers: a retrospective observational study. Bmj Open. 12: e063159. PMID 36343994 DOI: 10.1136/bmjopen-2022-063159  0.034
2015 De Jong HK, Achouiti A, Koh GC, Parry CM, Baker S, Faiz MA, van Dissel JT, Vollaard AM, van Leeuwen EM, Roelofs JJ, de Vos AF, Roth J, van der Poll T, Vogl T, Wiersinga WJ. Expression and function of S100A8/A9 (calprotectin) in human typhoid fever and the murine Salmonella model. Plos Neglected Tropical Diseases. 9: e0003663. PMID 25860480 DOI: 10.1371/journal.pntd.0003663  0.034
2015 Baker SR, Shah S, Ghosh S, Castro A. Radiology medical malpractice suits in gastrointestinal radiology: prevalence, causes, and outcomes. Emergency Radiology. 22: 141-5. PMID 25193045 DOI: 10.1007/s10140-014-1268-3  0.034
2009 Lisovsky M, Dresser K, Baker S, Fisher A, Woda B, Banner B, Lauwers GY. Cell polarity protein Lgl2 is lost or aberrantly localized in gastric dysplasia and adenocarcinoma: an immunohistochemical study. Modern Pathology : An Official Journal of the United States and Canadian Academy of Pathology, Inc. 22: 977-84. PMID 19407852 DOI: 10.1038/modpathol.2009.68  0.033
2016 Arjyal A, Basnyat B, Nhan HT, Koirala S, Giri A, Joshi N, Shakya M, Pathak KR, Mahat SP, Prajapati SP, Adhikari N, Thapa R, Merson L, Gajurel D, Lamsal K, ... ... Baker S, et al. Gatifloxacin versus ceftriaxone for uncomplicated enteric fever in Nepal: an open-label, two-centre, randomised controlled trial. The Lancet. Infectious Diseases. PMID 26809813 DOI: 10.1016/S1473-3099(15)00530-7  0.033
2019 Toy T, Pak GD, Duc TP, Campbell JI, El Tayeb MA, Von Kalckreuth V, Im J, Panzner U, Cruz Espinoza LM, Eibach D, Dekker DM, Park SE, Jeon HJ, Konings F, Mogeni OD, ... ... Baker S, et al. Multicountry Distribution and Characterization of Extended-spectrum β-Lactamase-associated Gram-negative Bacteria From Bloodstream Infections in Sub-Saharan Africa. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 69: S449-S458. PMID 31665776 DOI: 10.1093/cid/ciz450  0.033
2004 Baker SR. Sickle crisis. Emergency Radiology. 10: 167. PMID 15290481 DOI: 10.1007/s10140-003-0312-5  0.033
2023 Mylona E, Hefele L, Tran Vu Thieu N, Trinh Van T, Nguyen Ngoc Minh C, Tran Tuan A, Karkey A, Dongol S, Basnyat B, Voong Vinh P, Ho Ngoc Dan T, Russell P, Charles RC, Parry CM, Baker S. The identification of enteric fever-specific antigens for population based serosurveillance. The Journal of Infectious Diseases. PMID 37403670 DOI: 10.1093/infdis/jiad242  0.033
2017 Marks F, von Kalckreuth V, Aaby P, Adu-Sarkodie Y, El Tayeb MA, Ali M, Aseffa A, Baker S, Biggs HM, Bjerregaard-Andersen M, Breiman RF, Campbell JI, Cosmas L, Crump JA, Espinoza LM, et al. Incidence of invasive salmonella disease in sub-Saharan Africa: a multicentre population-based surveillance study. The Lancet. Global Health. 5: e310-e323. PMID 28193398 DOI: 10.1016/S2214-109X(17)30022-0  0.033
2017 Tran Vu Thieu N, Trinh Van T, Tran Tuan A, Klemm EJ, Nguyen Ngoc Minh C, Voong Vinh P, Pham Thanh D, Ho Ngoc Dan T, Pham Duc T, Langat P, Martin LB, Galan J, Liang L, Felgner PL, Davies DH, ... ... Baker S, et al. An evaluation of purified Salmonella Typhi protein antigens for the serological diagnosis of acute typhoid fever. The Journal of Infection. PMID 28551371 DOI: 10.1016/J.Jinf.2017.05.007  0.032
2016 Hood SM, Baker S, Sala A. Fortifying the forest: thinning and burning increase resistance to a bark beetle outbreak and promote forest resilience. Ecological Applications : a Publication of the Ecological Society of America. 26: 1984-2000. PMID 27755724 DOI: 10.1002/eap.1363  0.032
2016 Cruz Espinoza LM, Nichols C, Adu-Sarkodie Y, Al-Emran HM, Baker S, Clemens JD, Dekker DM, Eibach D, Krumkamp R, Boahen K, Im J, Jaeger A, von Kalckreuth V, Pak GD, Panzner U, et al. Variations of Invasive Salmonella Infections by Population Size in Asante Akim North Municipal, Ghana. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 62: S17-22. PMID 26933015 DOI: 10.1093/cid/civ787  0.032
2010 Aquilina NJ, Delgado-Saborit JM, Gauci AP, Baker S, Meddings C, Harrison RM. Comparative modeling approaches for personal exposure to particle-associated PAH. Environmental Science & Technology. 44: 9370-6. PMID 21090571 DOI: 10.1021/es102529k  0.032
2017 Haselbeck AH, Panzner U, Im J, Baker S, Meyer CG, Marks F. Current perspectives on invasive nontyphoidal Salmonella disease. Current Opinion in Infectious Diseases. PMID 28731899 DOI: 10.1097/QCO.0000000000000398  0.032
2008 Holt KE, Parkhill J, Mazzoni CJ, Roumagnac P, Weill FX, Goodhead I, Rance R, Baker S, Maskell DJ, Wain J, Dolecek C, Achtman M, Dougan G. High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi. Nature Genetics. 40: 987-93. PMID 18660809 DOI: 10.1038/ng.195  0.032
2017 Dobinson HC, Gibani MM, Jones C, Thomaides-Brears HB, Voysey M, Darton TC, Waddington CS, Campbell D, Milligan I, Zhou L, Shrestha S, Kerridge SA, Peters A, Stevens Z, Podda A, ... ... Baker S, et al. Evaluation of the clinical and microbiological response to Salmonella Paratyphi A infection in the first paratyphoid human challenge model. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 28158395 DOI: 10.1093/cid/cix042  0.032
2024 Jones NK, Tom B, Simillis C, Bennet J, Gourgiotis S, Griffin J, Blaza H, Nasser S, Baker S, Gouliouris T. Impact of penicillin allergy labels on surgical site infections in a large UK cohort of gastrointestinal surgery patients. Jac-Antimicrobial Resistance. 6: dlae022. PMID 38372001 DOI: 10.1093/jacamr/dlae022  0.032
2008 Yue G, Hao S, Fadare O, Baker S, Pozdnyakova O, Galili N, Woda BA, Raza A, Wang SA. Hypocellularity in myelodysplastic syndrome is an independent factor which predicts a favorable outcome. Leukemia Research. 32: 553-8. PMID 17888511 DOI: 10.1016/j.leukres.2007.08.006  0.032
2005 Abujudeh H, Vuong B, Baker SR. Quality and operations of portable X-ray examination procedures in the emergency room: Queuing theory at work Emergency Radiology. 11: 262-266. PMID 16133619 DOI: 10.1007/s10140-005-0405-4  0.032
2011 Masden D, Baker S. A novel approach for correcting mandibular asymmetry with a combination of autologous fat and alloplastic implants. Aesthetic Surgery Journal. 30: 513-5. PMID 20829247 DOI: 10.1177/1090820X10380704  0.032
2021 Baker KR, Lee SD, Lemieux P, Hudson S, Murphy BN, Bash JO, Koplitz SN, Nguyen TKV, Hao WM, Baker S, Lincoln E. Predicting wildfire particulate matter and hypothetical re-emission of radiological Cs-137 contamination incidents. The Science of the Total Environment. 795: 148872. PMID 34328919 DOI: 10.1016/j.scitotenv.2021.148872  0.031
2019 Parry CM, Ribeiro I, Walia K, Rupali P, Baker S, Basnyat B. Multidrug resistant enteric fever in South Asia: unmet medical needs and opportunities. Bmj (Clinical Research Ed.). 364: k5322. PMID 30670452 DOI: 10.1136/bmj.k5322  0.031
2013 Liang L, Juarez S, Nga TVT, Dunstan S, Nakajima-Sasaki R, Huw Davies D, McSorley S, Baker S, Felgner PL. Immune profiling with a Salmonella Typhi antigen microarray identifies new diagnostic biomarkers of human typhoid Scientific Reports. 3. PMID 23304434 DOI: 10.1038/Srep01043  0.031
2022 Tran HNH, Thu TNH, Nguyen PH, Vo CN, Doan KV, Nguyen Ngoc Minh C, Nguyen NT, Ta VND, Vu KA, Hua TD, Nguyen TNT, Van TT, Pham Duc T, Duong BL, Nguyen PM, ... ... Baker S, et al. Tumour microbiomes and Fusobacterium genomics in Vietnamese colorectal cancer patients. Npj Biofilms and Microbiomes. 8: 87. PMID 36307484 DOI: 10.1038/s41522-022-00351-7  0.031
2015 Nguyen DV, Anh PH, Cuong NV, Hoa NT, Carrique-Mas J, Hien VB, Sharp C, Rabaa M, Berto A, Campbell J, Baker S, Farrar J, Woolhouse ME, Bryant JE, Simmonds P. Large-scale screening and characterization of enteroviruses and kobuviruses infecting pigs in Vietnam. The Journal of General Virology. PMID 26653281 DOI: 10.1099/Jgv.0.000366  0.031
2022 Cooper DJ, Lear S, Watson L, Shaw A, Ferris M, Doffinger R, Bousfield R, Sharrocks K, Weekes MP, Warne B, Sparkes D, Jones NK, Rivett L, Routledge M, Chaudhry A, ... ... Baker S, et al. A prospective study of risk factors associated with seroprevalence of SARS-CoV-2 antibodies in healthcare workers at a large UK teaching hospital. The Journal of Infection. PMID 36058413 DOI: 10.1016/j.jinf.2022.08.030  0.031
2023 Fachrul M, Karkey A, Shakya M, Judd LM, Harshegyi T, Sim KS, Tonks S, Dongol S, Shrestha R, Salim A, Baker S, Pollard AJ, Khor CC, Dolecek C, Basnyat B, et al. Direct inference and control of genetic population structure from RNA sequencing data. Communications Biology. 6: 804. PMID 37532769 DOI: 10.1038/s42003-023-05171-9  0.031
2020 Baker S, Kellam P, Krishna A, Reece S. Protecting intubated patients from the threat of antimicrobial resistant infections with monoclonal antibodies. The Lancet. Microbe. 1: e191-e192. PMID 33521719 DOI: 10.1016/S2666-5247(20)30126-9  0.03
2007 Perugini RA, Quarfordt SH, Baker S, Czerniach DR, Litwin DE, Kelly JJ. Metabolic characterization of nondiabetic severely obese patients undergoing Roux-en-Y gastric bypass: preoperative classification predicts the effects of gastric bypass on insulin-glucose homeostasis. Journal of Gastrointestinal Surgery : Official Journal of the Society For Surgery of the Alimentary Tract. 11: 1083-90. PMID 17588192 DOI: 10.1007/s11605-007-0158-3  0.03
2022 Toan ND, Darton TC, Huong NHT, Nhat LTH, Nguyen TNT, Tuyen HT, Thinh LQ, Mau NK, Tam PTT, Phuong CN, Nhan LNT, Minh NNQ, Xuan NM, Thuong TC, Hung NT, ... ... Baker S, et al. Clinical and laboratory factors associated with neonatal sepsis mortality at a major Vietnamese children's hospital. Plos Global Public Health. 2: e0000875. PMID 36962870 DOI: 10.1371/journal.pgph.0000875  0.03
2018 Le Thi Phuong T, Rattanavong S, Vongsouvath M, Davong V, Phu Huong Lan N, Campbell JI, Darton TC, Thwaites GE, Newton PN, Dance DAB, Baker S. Non-typhoidal Salmonella serovars associated with invasive and non-invasive disease in the Lao People's Democratic Republic. Transactions of the Royal Society of Tropical Medicine and Hygiene. PMID 29342283 DOI: 10.1093/trstmh/trx076  0.03
2024 Le SH, Nguyen Ngoc Minh C, de Sessions PF, Jie S, Tran Thi Hong C, Thwaites GE, Baker S, Pham DT, Chung The H. The impact of antibiotics on the gut microbiota of children recovering from watery diarrhoea. Npj Antimicrobials and Resistance. 2: 12. PMID 38686335 DOI: 10.1038/s44259-024-00030-x  0.03
2020 Minh NNQ, Toi PV, Qui LM, Tinh LBB, Ngoc NT, Kim LTN, Uyen NH, Hang VTT, Chinh B'Krong NTT, Tham NT, Khoa TD, Khuong HD, Vi PQ, Phuc NNH, Vien LTM, ... ... Baker S, et al. Antibiotic use and prescription and its effects on Enterobacteriaceae in the gut in children with mild respiratory infections in Ho Chi Minh City, Vietnam. A prospective observational outpatient study. Plos One. 15: e0241760. PMID 33147269 DOI: 10.1371/journal.pone.0241760  0.03
2020 Meredith LW, Hamilton WL, Warne B, Houldcroft CJ, Hosmillo M, Jahun AS, Curran MD, Parmar S, Caller LG, Caddy SL, Khokhar FA, Yakovleva A, Hall G, Feltwell T, Forrest S, ... ... Baker S, et al. Rapid implementation of SARS-CoV-2 sequencing to investigate cases of health-care associated COVID-19: a prospective genomic surveillance study. The Lancet. Infectious Diseases. PMID 32679081 DOI: 10.1016/S1473-3099(20)30562-4  0.03
2019 Nguyen TKT, Ngo TT, Tran MP, Pham TTT, Vu TTH, Nguyen THN, Thwaites G, Virtala AK, Vapalahti O, Baker S, Le VT. Respiratory viruses in individuals with high frequency of animal exposure in southern and highland Vietnam. Journal of Medical Virology. PMID 31769525 DOI: 10.1002/jmv.25640  0.03
2011 Delgado-Saborit JM, Aquilina NJ, Meddings C, Baker S, Harrison RM. Relationship of personal exposure to volatile organic compounds to home, work and fixed site outdoor concentrations. The Science of the Total Environment. 409: 478-88. PMID 21112612 DOI: 10.1016/j.scitotenv.2010.10.014  0.03
2016 Pham Thanh D, Thanh Tuyen H, Nguyen Thi Nguyen T, Chung The H, Wick RR, Thwaites GE, Baker S, Holt KE. Inducible colistin resistance via a disrupted plasmid-borne mcr-1 gene in a 2008 Vietnamese Shigella sonnei isolate. The Journal of Antimicrobial Chemotherapy. PMID 27246235 DOI: 10.1093/jac/dkw173  0.029
2016 Pach A, Warren M, Chang I, Im J, Nichols C, Meyer CG, Pak GD, Panzner U, Park SE, von Kalckreuth V, Baker S, Rabezanahary H, Rakotondrainiarivelo JP, Raminosoa TM, Rakotozandrindrainy R, et al. A Qualitative Study Investigating Experiences, Perceptions, and Healthcare System Performance in Relation to the Surveillance of Typhoid Fever in Madagascar. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 62: S69-75. PMID 26933024 DOI: 10.1093/cid/civ892  0.029
2013 Baker SR, Whang JS, Luk L, Clarkin KS, Castro A, Patel R. The demography of medical malpractice suits against radiologists. Radiology. 266: 539-47. PMID 23192777 DOI: 10.1148/radiol.12110971  0.029
2024 Clark JA, Gouliouris T, Conway Morris A, Curran MD, White D, Daubney E, Navapurkar V, Baker S, Pathan N. Enhanced diagnosis of severe bacterial and fungal respiratory infection in children using a rapid syndromic array-case report. Translational Pediatrics. 13: 697-703. PMID 38715674 DOI: 10.21037/tp-23-525  0.029
2006 Brison D, Lamba S, Jafary A, Bhalla R, Baker SR. Case report: urinary retention secondary to a foreign body in the male urethra. Emergency Radiology. 13: 143-5. PMID 17039341 DOI: 10.1007/s10140-006-0523-7  0.028
2017 Ware JB, Jha S, Hoang JK, Baker S, Wruble J. Effective Radiology Reporting. Journal of the American College of Radiology : Jacr. PMID 28434849 DOI: 10.1016/j.jacr.2017.01.045  0.028
2016 Marks F, Rabehanta N, Baker S, Panzner U, Park SE, Fobil JN, Meyer CG, Rakotozandrindrainy R. A Way Forward for Healthcare in Madagascar? Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 62: S76-9. PMID 26933025 DOI: 10.1093/cid/civ758  0.028
2011 Arjyal A, Basnyat B, Koirala S, Karkey A, Dongol S, Agrawaal KK, Shakya N, Shrestha K, Sharma M, Lama S, Shrestha K, Khatri NS, Shrestha U, Campbell JI, Baker S, et al. Gatifloxacin versus chloramphenicol for uncomplicated enteric fever: an open-label, randomised, controlled trial. The Lancet. Infectious Diseases. 11: 445-54. PMID 21531174 DOI: 10.1016/S1473-3099(11)70089-5  0.028
2003 Lai KK, Fontecchio SA, Kelley AL, Baker S, Melvin ZS. The changing epidemiology of vancomycin-resistant enterococci. Infection Control and Hospital Epidemiology. 24: 264-8. PMID 12725355 DOI: 10.1086/502203  0.028
2021 Conway Morris A, Sharrocks K, Bousfield R, Kermack L, Maes M, Higginson E, Forrest S, Pereira-Dias J, Cormie C, Old T, Brooks S, Hamed I, Koenig A, Turner A, White P, ... ... Baker S, et al. The removal of airborne SARS-CoV-2 and other microbial bioaerosols by air filtration on COVID-19 surge units. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 34718446 DOI: 10.1093/cid/ciab933  0.028
2013 Koirala S, Basnyat B, Arjyal A, Shilpakar O, Shrestha K, Shrestha R, Shrestha UM, Agrawal K, Koirala KD, Thapa SD, Karkey A, Dongol S, Giri A, Shakya M, Pathak KR, ... ... Baker S, et al. Gatifloxacin versus ofloxacin for the treatment of uncomplicated enteric fever in Nepal: an open-label, randomized, controlled trial. Plos Neglected Tropical Diseases. 7: e2523. PMID 24282626 DOI: 10.1371/journal.pntd.0002523  0.028
2008 Baker S, Weinzweig J. Bioentrepreneurialism for the plastic surgeon. Plastic and Reconstructive Surgery. 122: 295-301. PMID 18594420 DOI: 10.1097/PRS.0b013e3181774205  0.028
2021 Baker S. Challenges and opportunities in antimicrobial resistance research. Microbiology (Reading, England). PMID 33493105 DOI: 10.1099/mic.0.000999  0.028
2016 Maude RR, Ghose A, Samad R, de Jong HK, Fukushima M, Wijedoru L, Hassan MU, Hossain MA, Karim MR, Sayeed AA, van den Ende S, Pal S, Zahed AS, Rahman W, Karnain R, ... ... Baker S, et al. A prospective study of the importance of enteric fever as a cause of non-malarial febrile illness in patients admitted to Chittagong Medical College Hospital, Bangladesh. Bmc Infectious Diseases. 16: 567. PMID 27737634 DOI: 10.1186/s12879-016-1886-3  0.027
2020 Emmanuel A, Goosey RW, Wiseman G, Baker S, Törnblom H. Impact of symptom severity in patients with diarrhoea-predominant irritable bowel syndrome (IBS-D): results from two separate surveys of HCPs and patients with IBS-D. Bmc Gastroenterology. 20: 127. PMID 32336287 DOI: 10.1186/s12876-020-01252-9  0.027
2003 Perugini RA, Mason R, Czerniach DR, Novitsky YW, Baker S, Litwin DE, Kelly JJ. Predictors of complication and suboptimal weight loss after laparoscopic Roux-en-Y gastric bypass: a series of 188 patients. Archives of Surgery (Chicago, Ill. : 1960). 138: 541-5; discussion 54. PMID 12742960 DOI: 10.1001/ARCHSURG.138.5.541  0.027
2019 Nadjm B, Dat VQ, Campbell JI, Dung VTV, Torre A, Tu NTC, Van NTT, Trinh DT, Lan NPH, Trung NV, Hang NTT, Hoi LT, Baker S, Wolbers M, Chau NVV, et al. A randomised controlled trial of matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDITOF-MS) versus conventional microbiological methods for identifying pathogens: impact on optimal antimicrobial therapy of invasive bacterial and fungal infections in Vietnam. The Journal of Infection. PMID 30914268 DOI: 10.1016/j.jinf.2019.03.010  0.027
2019 Mogeni OD, Cruz Espinoza LM, Im J, Panzner U, Toy T, Pak GD, Haselbeck A, Ramani E, Schütt-Gerowitt H, Jacobs J, Metila OL, Adewusi OJ, Okeke IN, Ogunleye VI, Owusu-Dabo E, ... ... Baker S, et al. The Monitoring and Evaluation of a Multicountry Surveillance Study, the Severe Typhoid Fever in Africa Program. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 69: S510-S518. PMID 31665780 DOI: 10.1093/cid/ciz597  0.027
2018 Ho NT, Thompson C, Nhan LNT, Van HMT, Dung NT, Tran My P, Quang VM, Minh NNQ, Tuan TA, Hung NT, Tuan HM, Vinh Chau NV, Wolbers M, Thwaites GE, Choisy M, ... Baker S, et al. Retrospective analysis assessing the spatial and temporal distribution of paediatric acute respiratory tract infections in Ho Chi Minh City, Vietnam. Bmj Open. 8: e016349. PMID 29358416 DOI: 10.1136/bmjopen-2017-016349  0.027
2006 Baker SR, Bhatti WA. The thyroid cancer epidemic: Is it the dark side of the CT revolution? European Journal of Radiology. 60: 67-69. PMID 16787731 DOI: 10.1016/j.ejrad.2006.04.022  0.027
2019 Teferi M, Desta M, Yeshitela B, Beyene T, Cruz Espinoza LM, Im J, Jeon HJ, Kim JH, Konings F, Kwon SY, Pak GD, Park JK, Park SE, Yedenekachew M, Kim J, ... Baker S, et al. Acute Febrile Illness Among Children in Butajira, South-Central Ethiopia During the Typhoid Fever Surveillance in Africa Program. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 69: S483-S491. PMID 31665778 DOI: 10.1093/cid/ciz620  0.027
2023 Martin LB, Khanam F, Qadri F, Khalil I, Sikorski MJ, Baker S. Vaccine value profile for Salmonella enterica serovar Paratyphi A. Vaccine. S114-S133. PMID 37951691 DOI: 10.1016/j.vaccine.2023.01.054  0.027
2021 Park SE, Pham DT, Pak GD, Panzner U, Maria Cruz Espinoza L, von Kalckreuth V, Im J, Mogeni OD, Schütt-Gerowitt H, Crump JA, Breiman RF, Adu-Sarkodie Y, Owusu-Dabo E, Rakotozandrindrainy R, Bassiahi Soura A, ... ... Baker S, et al. The genomic epidemiology of multi-drug resistant invasive non-typhoidal in selected sub-Saharan African countries. Bmj Global Health. 6. PMID 34341020 DOI: 10.1136/bmjgh-2021-005659  0.026
2017 Darton TC, Baker S, Randall A, Dongol S, Karkey A, Voysey M, Carter MJ, Jones C, Trappl K, Pablo J, Hung C, Teng A, Shandling A, Le T, Walker C, et al. Identification of Novel Serodiagnostic Signatures of Typhoid Fever Using a Salmonella Proteome Array. Frontiers in Microbiology. 8: 1794. PMID 28970824 DOI: 10.3389/Fmicb.2017.01794  0.025
2010 Nguyen NT, Ha V, Tran NV, Stabler R, Pham DT, Le TM, van Doorn HR, Cerdeño-Tárraga A, Thomson N, Campbell J, Nguyen VM, Tran TT, Pham MV, Cao TT, Wren B, ... ... Baker S, et al. The sudden dominance of blaCTX-M harbouring plasmids in Shigella spp. Circulating in Southern Vietnam. Plos Neglected Tropical Diseases. 4: e702. PMID 20544028 DOI: 10.1371/journal.pntd.0000702  0.025
2007 Halak M, McDonnell CO, Muhlmann MD, Baker SR. Open surgical treatment of aneurysmal sac expansion following endovascular abdominal aneurysm repair: solution for an unresolved clinical dilemma. Vascular. 15: 201-4. PMID 17714635 DOI: 10.2310/6670.2007.00008  0.025
2008 Amis ES, Baker SR, Becker GJ, Colletti PM, Dunnick NR, Davis LP, Forman HP, Koss SA, Resnik CS, Berquist TH. Panel discussions in radiology: Changes in radiology training and new examination format. Ajr. American Journal of Roentgenology. 191: W217-30. PMID 19020208 DOI: 10.2214/AJR.08.1936  0.025
2015 Nichols C, Cruz Espinoza LM, von Kalckreuth V, Aaby P, Ahmed El Tayeb M, Ali M, Aseffa A, Bjerregaard-Andersen M, Breiman RF, Cosmas L, Crump JA, Dekker DM, Gassama Sow A, Gasmelseed N, Hertz JT, ... ... Baker S, et al. Bloodstream Infections and Frequency of Pretreatment Associated With Age and Hospitalization Status in Sub-Saharan Africa. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 61: S372-9. PMID 26449954 DOI: 10.1093/cid/civ730  0.025
2018 de Alwis R, Tu LTP, Quynh NLT, Thompson CN, Anders KL, Van Thuy NT, Hieu NT, Vi LL, Chau NVV, Duong VT, Chau TTH, Tuyen HT, Nga TVT, Minh PV, Tan TV, ... ... Baker S, et al. The Role of Maternally Acquired Antibody in Providing Protective Immunity Against Nontyphoidal Salmonella in Urban Vietnamese Infants: A Birth Cohort Study. The Journal of Infectious Diseases. PMID 30321351 DOI: 10.1093/infdis/jiy501  0.025
2009 Khatri NS, Maskey P, Poudel S, Jaiswal VK, Karkey A, Koirala S, Shakya N, Agrawal K, Arjyal A, Basnyat B, Day J, Farrar J, Dolecek C, Baker S. Gallbladder carriage of Salmonella paratyphi A may be an important factor in the increasing incidence of this infection in South Asia. Annals of Internal Medicine. 150: 567-8. PMID 19380862 DOI: 10.7326/0003-4819-150-8-200904210-00017  0.025
2018 Le QT, Phung KL, Nguyen VT, Anders KL, Nguyen MN, Hoang DT, Bui TT, Nguyen VV, Thwaites GE, Simmons C, Baker S. Factors associated with a low prevalence of exclusive breastfeeding during hospital stay in urban and semi-rural areas of southern Vietnam. International Breastfeeding Journal. 13: 46. PMID 30364288 DOI: 10.1186/s13006-018-0188-3  0.024
2013 Phu NH, Hoang Mai NT, Nghia HD, Chau TT, Loc PP, Thai le H, Phuong TM, Thai CQ, Man DN, Van Vinh Chau N, Nga TV, Campbell J, Baker S, Whitehorn J. Fatal consequences of freshwater pearl diving. Lancet (London, England). 381: 176. PMID 23312755 DOI: 10.1016/S0140-6736(12)61730-9  0.024
2010 Petscavage J, Baker SR, Clarkin K, Luk L. Overuse of concomitant foot radiographic series in patients sustaining minor ankle injuries. Emergency Radiology. 17: 261-5. PMID 19834751 DOI: 10.1007/s10140-009-0846-2  0.024
2020 Qumar S, Nguyen TH, Nahar S, Sarker N, Baker S, Bulach D, Ahmed N, Rahman M. A comparative whole genome analysis of Helicobacter pylori from a human dense South Asian setting. Helicobacter. e12766. PMID 33073485 DOI: 10.1111/hel.12766  0.023
2015 Thompson CN, Tu LT, Anders KL, Hieu NT, Vi LL, Chau NV, Duong VT, Chau NN, Chau TT, Tuyen HT, Nga TV, Van Minh P, Nhu TD, Nhi LT, Saul A, ... ... Baker S, et al. The transfer and decay of maternal antibody against Shigella sonnei in a longitudinal cohort of Vietnamese infants. Vaccine. PMID 26742945 DOI: 10.1016/j.vaccine.2015.12.047  0.023
2010 Baker SR, Susman PH, Sheen L, Pan L. A comparison of test-ordering choices of college physicians and emergency physicians for young adults with abdominal pain: influences and preferences for CT use. Emergency Radiology. 17: 455-9. PMID 20532939 DOI: 10.1007/s10140-010-0881-z  0.023
2016 Panzner U, Pak GD, Aaby P, Adu-Sarkodie Y, Ali M, Aseffa A, Baker S, Bjerregaard-Andersen M, Crump JA, Deerin J, Cruz Espinoza LM, Gasmelseed N, Heriniaina JN, Hertz JT, Im J, et al. Utilization of Healthcare in the Typhoid Fever Surveillance in Africa Program. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 62: S56-68. PMID 26933023 DOI: 10.1093/cid/civ891  0.023
2007 Baker SR, Chaudhry H, Tilak GS. Indian radiologists in the United States: hierarchical distribution and representation. Journal of the American College of Radiology : Jacr. 4: 234-9. PMID 17412275 DOI: 10.1016/j.jacr.2006.09.019  0.023
2022 Smith RM, Cooper DJ, Doffinger R, Stacey H, Al-Mohammad A, Goodfellow I, Baker S, Lear S, Hosmilo M, Pritchard N, Torpey N, Jayne D, Yiu V, Chalisey A, Lee J, et al. SARS-COV-2 vaccine responses in renal patient populations. Bmc Nephrology. 23: 199. PMID 35641961 DOI: 10.1186/s12882-022-02792-w  0.023
2014 Khauv P, Turner P, Soeng C, Soeng S, Moore CE, Bousfield R, Stoesser N, Emary K, Thanh DP, Baker S, Hang VT, van Doorn HR, Day NP, Parry CM. Ophthalmic infections in children presenting to Angkor Hospital for Children, Siem Reap, Cambodia. Bmc Research Notes. 7: 784. PMID 25369774 DOI: 10.1186/1756-0500-7-784  0.023
2005 Baker SR. Electronic publishing-a boon or a bugbear. Emergency Radiology. 12: 1-2. PMID 16344979 DOI: 10.1007/s10140-005-0443-y  0.023
2020 Giri A, Karkey A, Dangol S, Arjyal A, Pokharel S, Rijal S, Gajurel D, Sharma R, Lamsal K, Shrestha P, Prajapati G, Pathak S, Shrestha SR, K C RK, Pandey S, ... ... Baker S, et al. Trimethoprim-sulfamethoxazole (SXT) versus azithromycin for the treatment of undifferentiated febrile illness in Nepal: a double-blind, randomized, placebo-controlled trial. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 32991678 DOI: 10.1093/cid/ciaa1489  0.022
2021 Manandhar S, Amatya P, Ansari I, Joshi N, Maharjan N, Dongol S, Basnyat B, Dixit SM, Baker S, Karkey A. Risk factors for the development of neonatal sepsis in a neonatal intensive care unit of a tertiary care hospital of Nepal. Bmc Infectious Diseases. 21: 546. PMID 34107906 DOI: 10.1186/s12879-021-06261-x  0.022
2012 Baker S, Daginawala N. Leadership training for radiologists: a survey of opportunities and participants in MBA and MPH programs by medical students, residents, and current chairpersons. Journal of the American College of Radiology : Jacr. 8: 563-7. PMID 21807350 DOI: 10.1016/j.jacr.2011.02.013  0.022
2023 Jones NK, Thu TNH, de Alwis R, Thompson C, Tuyen HT, Nhu TDH, Phat VV, Trung PD, Lam PK, Tien BTT, Tuyet HTD, Vi LL, Van Vinh Chau N, Le Thi Quynh N, Baker S. The seroincidence of childhood Shigella sonnei infection in Ho Chi Minh City, Vietnam. Plos Neglected Tropical Diseases. 17: e0011728. PMID 37903147 DOI: 10.1371/journal.pntd.0011728  0.022
2011 Prestwich A, Hurling R, Baker S. Implicit shopping: attitudinal determinants of the purchasing of healthy and unhealthy foods. Psychology & Health. 26: 875-85. PMID 21432730 DOI: 10.1080/08870446.2010.509797  0.022
2011 Hoa NT, Chieu TT, Nghia HD, Mai NT, Anh PH, Wolbers M, Baker S, Campbell JI, Chau NV, Hien TT, Farrar J, Schultsz C. The antimicrobial resistance patterns and associated determinants in Streptococcus suis isolated from humans in southern Vietnam, 1997-2008. Bmc Infectious Diseases. 11: 6. PMID 21208459 DOI: 10.1186/1471-2334-11-6  0.021
2021 de Alwis R, Liang L, Taghavian O, Werner E, The HC, Thu TNH, Duong VT, Davies DH, Felgner PL, Baker S. The identification of novel immunogenic antigens as potential Shigella vaccine components. Genome Medicine. 13: 8. PMID 33451348 DOI: 10.1186/s13073-020-00824-4  0.021
2020 Parisi A, Le Thi Phuong T, Mather AE, Jombart T, Tuyen HT, Phu Huong Lan N, Hoang Thu Trang N, Carrique-Mas J, Campbell JI, Glass K, Kirk MD, Baker S. Differential antimicrobial susceptibility profiles between symptomatic and asymptomatic non-typhoidal infections in Vietnamese children. Epidemiology and Infection. 1-9. PMID 32450932 DOI: 10.1017/S0950268820001168  0.021
2015 Baker SR. Emergency Radiology in the United States - a stepchild finding its way. The British Journal of Radiology. 20150867. PMID 26607651 DOI: 10.1259/bjr.20150867  0.021
2009 Baker SR, Romero MJ, Geannette C, Patel A. The value of the internship for radiation oncology training: results of a survey of current and recent trainees. International Journal of Radiation Oncology, Biology, Physics. 74: 1203-6. PMID 19135313 DOI: 10.1016/j.ijrobp.2008.09.024  0.021
2022 Panzner U, Mogeni OD, Adu-Sarkodie Y, Toy T, Jeon HJ, Pak GD, Park SE, Enuameh Y, Owusu-Dabo E, Van Tan T, Aseffa A, Teferi M, Yeshitela B, Baker S, Rakotozandrindrainy R, et al. Detection of Salmonella Typhi nucleic acid by RT-PCR and anti-HlyE, -CdtB, -PilL, and -Vi IgM by ELISA at sites in Ghana, Madagascar and Ethiopia. Bmc Infectious Diseases. 22: 766. PMID 36184614 DOI: 10.1186/s12879-022-07726-3  0.02
2017 Taddio A, Riddell RP, Ipp M, Moss S, Baker S, Tolkin J, Dave M, Feerasta S, Govan P, Fletcher E, Wong H, McNair C, Mithal P, Stephens D. A longitudinal randomized trial of the impact of consistent pain management for infant vaccinations on future vaccination distress. The Journal of Pain : Official Journal of the American Pain Society. PMID 28455250 DOI: 10.1016/J.Jpain.2017.04.002  0.02
2013 Baker SR, Patel RH, Yang L, Lelkes VM, Castro A. Malpractice suits in chest radiology: an evaluation of the histories of 8265 radiologists. Journal of Thoracic Imaging. 28: 388-91. PMID 24149862 DOI: 10.1097/RTI.0b013e3182a21be2  0.02
2019 Nguyen LV, Ta QV, Dang TB, Nguyen PH, Nguyen T, Pham TVH, Nguyen TH, Baker S, Le Tran T, Yang DJ, Kim KW, Doan KV. Carvedilol improves glucose tolerance and insulin sensitivity in treatment of adrenergic overdrive in high fat diet-induced obesity in mice. Plos One. 14: e0224674. PMID 31682617 DOI: 10.1371/journal.pone.0224674  0.02
2008 Baker SR. First-year radiology residents not taking call. Emergency Radiology. 15: 79-80; author reply . PMID 18030506 DOI: 10.1007/s10140-007-0657-2  0.02
2006 Baker SR, Barry M, Chaudhry H, Hubbi B. Women as radiologists: are there barriers to entry and advancement? Journal of the American College of Radiology : Jacr. 3: 131-4. PMID 17412023 DOI: 10.1016/j.jacr.2005.10.001  0.02
2010 Jackson I, Bobbin M, Jordan M, Baker S. A survey of women urology residents regarding career choice and practice challenges. Journal of Women's Health (2002). 18: 1867-72. PMID 19951224 DOI: 10.1089/jwh.2008.1236  0.02
2017 Baker SR, Pentakota SR, Hubbi B. Breast radiology malpractice suits: Characteristics of frequency and outcomes- national and statewide distinctions. The Breast Journal. PMID 29139581 DOI: 10.1111/tbj.12953  0.02
2015 Chen L, Baker S, De Petris G, Yang B. HPV testing results and histologic follow-up in women with ASC-H cytology in different age groups. Journal of the American Society of Cytopathology. 4: 225-231. PMID 31051758 DOI: 10.1016/j.jasc.2015.01.005  0.019
2017 Hong Chau TT, Chau NNM, Hoang Le NT, The HC, Voong Vinh P, To NTN, Ngoc NM, Tuan HM, Ngoc TLC, Kolader ME, Farrar JJ, Wolbers M, Thwaites GE, Baker S. A Double Blind, Randomized, Placebo-Controlled Trial of Lactobacillus acidophilus for the Treatment of Acute Watery Diarrhea in Vietnamese Children. The Pediatric Infectious Disease Journal. PMID 28787388 DOI: 10.1097/INF.0000000000001712  0.019
2006 Baker SR. Controversy concerning E.R. physician performance of procedures. Emergency Radiology. 13: 1-2. PMID 16807716 DOI: 10.1007/s10140-006-0494-8  0.019
2010 Baker SR. Transmission of nonemergent critical findings: communication versus consultation. Radiology. 257: 609-11. PMID 21084411 DOI: 10.1148/radiol.10101679  0.019
2019 Park SE, Toy T, Cruz Espinoza LM, Panzner U, Mogeni OD, Im J, Poudyal N, Pak GD, Seo H, Chon Y, Schütt-Gerowitt H, Mogasale V, Ramani E, Dey A, Park JY, ... ... Baker S, et al. The Severe Typhoid Fever in Africa Program: Study Design and Methodology to Assess Disease Severity, Host Immunity, and Carriage Associated With Invasive Salmonellosis. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 69: S422-S434. PMID 31665779 DOI: 10.1093/cid/ciz715  0.019
2006 Baker SR. Emergency radiology and the press: an often immiscible interface. Emergency Radiology. 12: 147-9. PMID 16738929 DOI: 10.1007/s10140-006-0478-8  0.018
2013 Shieh M, Thompson C, Phan VT, Van TT, Tediosi F, Merson L, Farrar JJ, Ha MT, Ho LV, Pham TN, Baker S. The policy of free healthcare for children under the age of 6 years in Vietnam: assessment of the uptake for children hospitalised with acute diarrhoea in Ho Chi Minh City. Tropical Medicine & International Health : Tm & Ih. 18: 1444-51. PMID 24134427 DOI: 10.1111/tmi.12208  0.018
2021 Thuy DB, Campbell J, Thuy CT, Hoang NVM, Voong Vinh P, Nguyen TNT, Nguyen Ngoc Minh C, Pham DT, Rabaa MA, Lan NPH, Hao NV, Thwaites GE, Thwaites CL, Baker S, Chau NVV, et al. Colonization with and causes infections in a Vietnamese intensive care unit. Microbial Genomics. PMID 33502303 DOI: 10.1099/mgen.0.000514  0.017
2018 Törnblom H, Goosey R, Wiseman G, Baker S, Emmanuel A. Understanding symptom burden and attitudes to irritable bowel syndrome with diarrhoea: Results from patient and healthcare professional surveys. United European Gastroenterology Journal. 6: 1417-1427. PMID 30386615 DOI: 10.1177/2050640618787648  0.017
2017 Margolies PJ, Humensky JL, Chiang IC, Covell NH, Broadway-Wilson K, Gregory R, Jewell TC, Scannevin G, Baker S, Dixon LB. Is There a Role for Fidelity Self-Assessment in the Individual Placement and Support Model of Supported Employment? Psychiatric Services (Washington, D.C.). appips201600264. PMID 28412892 DOI: 10.1176/Appi.Ps.201600264  0.017
2010 Baker SR, Oif E, Roy R, Meehan TM. A survey of radiology chairpersons' perceptions of the relative importance of education of medical students, residents, and fellows. Ajr. American Journal of Roentgenology. 195: 974-8. PMID 20858827 DOI: 10.2214/AJR.10.4376  0.017
2012 Wijedoru LP, Kumar V, Chanpheaktra N, Chheng K, Smits HL, Pastoor R, Nga TV, Baker S, Wuthiekanun V, Peacock SJ, Putchhat H, Parry CM. Typhoid fever among hospitalized febrile children in Siem Reap, Cambodia. Journal of Tropical Pediatrics. 58: 68-70. PMID 21508082 DOI: 10.1093/tropej/fmr032  0.016
2019 Carrique-Mas J, Van Cuong N, Bao TD, Phu DH, Phuc TM, Turner H, Thwaites G, Baker S. The affordability of antimicrobials for animals and humans at retail in Vietnam: A call for revising pricing policies. International Journal of Antimicrobial Agents. PMID 31085299 DOI: 10.1016/j.ijantimicag.2019.05.009  0.016
2014 Pieters RS, Wagner H, Baker S, Morano K, Ulin K, Cicchetti MG, Bishop-Jodoin M, FitzGerald TJ. The impact of protocol assignment for older adolescents with hodgkin lymphoma. Frontiers in Oncology. 4: 317. PMID 25506581 DOI: 10.3389/fonc.2014.00317  0.016
2022 Manandhar S, Nguyen Q, Pham DT, Amatya P, Rabaa M, Dongol S, Basnyat B, Dixit SM, Baker S, Karkey A. A fatal outbreak of neonatal sepsis caused by mcr-10 carrying Enterobacter kobei in a tertiary care hospital in Nepal. The Journal of Hospital Infection. PMID 35460799 DOI: 10.1016/j.jhin.2022.03.015  0.016
2010 Baker SR, Luk L, Clarkin K. The trouble with fellowships. Journal of the American College of Radiology : Jacr. 7: 446-51. PMID 20522398 DOI: 10.1016/j.jacr.2010.01.020  0.015
2019 Jeon HJ, Im J, Haselbeck A, Holm M, Rakotozandrindrainy R, Bassiahi AS, Panzner U, Mogeni OD, Seo HJ, Lunguya O, Jacobs J, Okeke IN, Terferi M, Owusu-Dabo E, Dougan G, ... ... Baker S, et al. How Can the Typhoid Fever Surveillance in Africa and the Severe Typhoid Fever in Africa Programs Contribute to the Introduction of Typhoid Conjugate Vaccines? Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 69: S417-S421. PMID 31665772 DOI: 10.1093/cid/ciz629  0.014
2017 McNair C, Fung M, Taddio A, Ipp M, Moss S, Baker S, Tolkin J, Dave M, Feerasta S, Govan P, Riddell RP. Parent-led interventions in reducing infant vaccination pain after participation in a longitudinal randomized control trial. Paediatrics & Child Health. 22: 217-219. PMID 29479218 DOI: 10.1093/Pch/Pxx040  0.014
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