| Year |
Citation |
Score |
| 2020 |
Soliman C, Guy AJ, Chua JX, Vankemmelbeke M, McIntosh RS, Eastwood S, Truong VK, Elbourne A, Spendlove I, Durrant LG, Ramsland PA. Molecular and structural basis for Lewis glycan recognition by a cancer-targeting antibody. The Biochemical Journal. PMID 32789497 DOI: 10.1042/BCJ20200454 |
0.417 |
|
| 2020 |
Coff L, Chan J, Ramsland PA, Guy AJ. Identifying glycan motifs using a novel subtree mining approach. Bmc Bioinformatics. 21: 42. PMID 32019496 DOI: 10.1186/s12859-020-3374-4 |
0.431 |
|
| 2019 |
Soliman C, Pier GB, Ramsland PA. Antibody recognition of bacterial surfaces and extracellular polysaccharides. Current Opinion in Structural Biology. 62: 48-55. PMID 31874385 DOI: 10.1016/J.Sbi.2019.12.001 |
0.377 |
|
| 2019 |
Soliman C, Chua JX, Vankemmelbeke M, McIntosh RS, Guy AJ, Spendlove I, Durrant LG, Ramsland PA. The terminal sialic acid of stage-specific embryonic antigen-4 has a crucial role in binding to a cancer-targeting antibody. The Journal of Biological Chemistry. PMID 31831622 DOI: 10.1074/jbc.RA119.011518 |
0.38 |
|
| 2018 |
Burvenich IJG, Farrugia W, Liu Z, Makris D, King D, Gloria B, Perani A, Allan LC, Scott AM, Ramsland PA. Global conformational changes in IgG-Fc upon mutation of the FcRn binding site are not associated with altered antibody-dependent effector functions. The Biochemical Journal. PMID 29794155 DOI: 10.1042/BCJ20180139 |
0.423 |
|
| 2018 |
Guy AJ, Irani V, Beeson JG, Webb B, Sali A, Richards JS, Ramsland PA. Proteome-wide mapping of immune features onto Plasmodium protein three-dimensional structures. Scientific Reports. 8: 4355. PMID 29531293 DOI: 10.1038/S41598-018-22592-3 |
0.382 |
|
| 2018 |
Soliman C, Walduck AK, Yuriev E, Richards JS, Cywes-Bentley C, Pier GB, Ramsland PA. Structural basis for antibody targeting of the broadly expressed microbial polysaccharide poly--acetyl glucosamine. The Journal of Biological Chemistry. PMID 29449370 DOI: 10.1074/Jbc.Ra117.001170 |
0.356 |
|
| 2017 |
Dingjan T, Imberty A, Pérez S, Yuriev E, Ramsland PA. Molecular Simulations of Carbohydrates with a Fucose-Binding Burkholderia ambifaria Lectin Suggest Modulation by Surface Residues Outside the Fucose-Binding Pocket. Frontiers in Pharmacology. 8: 393. PMID 28680402 DOI: 10.3389/Fphar.2017.00393 |
0.333 |
|
| 2016 |
Soliman C, Yuriev E, Ramsland PA. Antibody recognition of aberrant glycosylation on the surface of cancer cells. Current Opinion in Structural Biology. 44: 1-8. PMID 27821276 DOI: 10.1016/j.sbi.2016.10.009 |
0.394 |
|
| 2016 |
Agostino M, Mancera RL, Ramsland PA, Fernández-Recio J. Optimization of protein-protein docking for predicting Fc-protein interactions. Journal of Molecular Recognition : Jmr. PMID 27445195 DOI: 10.1002/jmr.2555 |
0.739 |
|
| 2016 |
Dingjan T, Agostino M, Ramsland PA, Yuriev E. Antibody-Carbohydrate Recognition from Docked Ensembles Using the AutoMap Procedure. Methods in Molecular Biology (Clifton, N.J.). 1331: 41-55. PMID 26169734 DOI: 10.1007/978-1-4939-2874-3_4 |
0.73 |
|
| 2015 |
Guy AJ, Irani V, MacRaild CA, Anders RF, Norton RS, Beeson JG, Richards JS, Ramsland PA. Insights into the Immunological Properties of Intrinsically Disordered Malaria Proteins Using Proteome Scale Predictions. Plos One. 10: e0141729. PMID 26513658 DOI: 10.1371/journal.pone.0141729 |
0.315 |
|
| 2015 |
Irani V, Ramsland PA, Guy AJ, Siba PM, Mueller I, Richards JS, Beeson JG. Acquisition of functional antibodies that block the binding of erythrocyte binding antigen 175 and protection against Plasmodium falciparum malaria in children. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 26136391 DOI: 10.1093/cid/civ525 |
0.404 |
|
| 2015 |
Irani V, Guy AJ, Andrew D, Beeson JG, Ramsland PA, Richards JS. Molecular properties of human IgG subclasses and their implications for designing therapeutic monoclonal antibodies against infectious diseases. Molecular Immunology. PMID 25900877 DOI: 10.1016/j.molimm.2015.03.255 |
0.338 |
|
| 2015 |
Dingjan T, Spendlove I, Durrant LG, Scott AM, Yuriev E, Ramsland PA. Structural biology of antibody recognition of carbohydrate epitopes and potential uses for targeted cancer immunotherapies. Molecular Immunology. 67: 75-88. PMID 25757815 DOI: 10.1016/j.molimm.2015.02.028 |
0.395 |
|
| 2015 |
Agostino M, Velkov T, Dingjan T, Williams SJ, Yuriev E, Ramsland PA. The carbohydrate-binding promiscuity of Euonymus europaeus lectin is predicted to involve a single binding site. Glycobiology. 25: 101-14. PMID 25209582 DOI: 10.1093/Glycob/Cwu095 |
0.708 |
|
| 2014 |
Trist HM, Tan PS, Wines BD, Ramsland PA, Orlowski E, Stubbs J, Gardiner EE, Pietersz GA, Kent SJ, Stratov I, Burton DR, Hogarth PM. Polymorphisms and interspecies differences of the activating and inhibitory FcγRII of Macaca nemestrina influence the binding of human IgG subclasses. Journal of Immunology (Baltimore, Md. : 1950). 192: 792-803. PMID 24342805 DOI: 10.4049/Jimmunol.1301554 |
0.375 |
|
| 2013 |
Hutchinson AT, Malik A, Berkahn MB, Agostino M, To J, Tacchi JL, Djordjevic SP, Turnbull L, Whitchurch CB, Edmundson AB, Jones DR, Raison RL, Ramsland PA. Formation of assemblies on cell membranes by secreted proteins: molecular studies of free λ light chain aggregates found on the surface of myeloma cells. The Biochemical Journal. 454: 479-89. PMID 23822104 DOI: 10.1042/BJ20130575 |
0.657 |
|
| 2013 |
Agostino M, Mancera RL, Ramsland PA, Yuriev E. AutoMap: a tool for analyzing protein-ligand recognition using multiple ligand binding modes. Journal of Molecular Graphics & Modelling. 40: 80-90. PMID 23376613 DOI: 10.1016/j.jmgm.2013.01.001 |
0.723 |
|
| 2012 |
Christiansen D, Mouhtouris E, Ramsland PA, Sandrin MS. Studies on carbohydrate xenoantigens Methods in Molecular Biology. 885: 47-56. PMID 22565989 DOI: 10.1007/978-1-61779-845-0_4 |
0.371 |
|
| 2012 |
Agostino M, Yuriev E, Ramsland PA. Antibody recognition of cancer-related gangliosides and their mimics investigated using in silico site mapping. Plos One. 7: e35457. PMID 22536387 DOI: 10.1371/journal.pone.0035457 |
0.737 |
|
| 2012 |
Wines BD, Trist HM, Farrugia W, Ngo C, Trowsdale J, Areschoug T, Lindahl G, Fraser JD, Ramsland PA. A conserved host and pathogen recognition site on immunoglobulins: structural and functional aspects. Advances in Experimental Medicine and Biology. 946: 87-112. PMID 21948364 DOI: 10.1007/978-1-4614-0106-3_6 |
0.322 |
|
| 2011 |
Agostino M, Yuriev E, Ramsland PA. A computational approach for exploring carbohydrate recognition by lectins in innate immunity. Frontiers in Immunology. 2: 23. PMID 22566813 DOI: 10.3389/fimmu.2011.00023 |
0.722 |
|
| 2011 |
Ramsland PA, Farrugia W, Bradford TM, Sardjono CT, Esparon S, Trist HM, Powell MS, Tan PS, Cendron AC, Wines BD, Scott AM, Hogarth PM. Structural basis for Fc gammaRIIa recognition of human IgG and formation of inflammatory signaling complexes. Journal of Immunology (Baltimore, Md. : 1950). 187: 3208-17. PMID 21856937 DOI: 10.4049/Jimmunol.1101467 |
0.374 |
|
| 2011 |
Wines BD, Ramsland PA, Trist HM, Gardam S, Brink R, Fraser JD, Hogarth PM. Interaction of human, rat, and mouse immunoglobulin A (IgA) with Staphylococcal superantigen-like 7 (SSL7) decoy protein and leukocyte IgA receptor. The Journal of Biological Chemistry. 286: 33118-24. PMID 21784854 DOI: 10.1074/jbc.M111.272252 |
0.333 |
|
| 2011 |
Agostino M, Sandrin MS, Thompson PE, Farrugia W, Ramsland PA, Yuriev E. Carbohydrate-mimetic peptides: structural aspects of mimicry and therapeutic implications. Expert Opinion On Biological Therapy. 11: 211-24. PMID 21219238 DOI: 10.1517/14712598.2011.542140 |
0.669 |
|
| 2011 |
Agostino M, Sandrin MS, Thompson PE, Ramsland PA, Yuriev E. Peptide inhibitors of xenoreactive antibodies mimic the interaction profile of the native carbohydrate antigens. Biopolymers. 96: 193-206. PMID 20564023 DOI: 10.1002/bip.21427 |
0.731 |
|
| 2010 |
Yuriev E, Agostino M, Ramsland PA. Challenges and advances in computational docking: 2009 in review. Journal of Molecular Recognition : Jmr. 24: 149-64. PMID 21360606 DOI: 10.1002/jmr.1077 |
0.675 |
|
| 2010 |
Hutchinson AT, Ramsland PA, Jones DR, Agostino M, Lund ME, Jennings CV, Bockhorni V, Yuriev E, Edmundson AB, Raison RL. Free Ig light chains interact with sphingomyelin and are found on the surface of myeloma plasma cells in an aggregated form. Journal of Immunology (Baltimore, Md. : 1950). 185: 4179-88. PMID 20817866 DOI: 10.4049/jimmunol.1001956 |
0.636 |
|
| 2010 |
Agostino M, Sandrin MS, Thompson PE, Yuriev E, Ramsland PA. Identification of preferred carbohydrate binding modes in xenoreactive antibodies by combining conformational filters and binding site maps. Glycobiology. 20: 724-35. PMID 20176856 DOI: 10.1093/glycob/cwq022 |
0.755 |
|
| 2010 |
Koti M, Farrugia W, Nagy E, Ramsland PA, Kaushik AK. Construction of single-chain Fv with two possible CDR3H conformations but similar inter-molecular forces that neutralize bovine herpesvirus 1. Molecular Immunology. 47: 953-60. PMID 20006385 DOI: 10.1016/j.molimm.2009.11.011 |
0.444 |
|
| 2010 |
Agostino M, Jene C, Boyle T, Ramsland PA, Yuriev E. Molecular docking of carbohydrate ligands to antibodies: structural validation against crystal structures. Journal of Chemical Information and Modeling. 49: 2749-60. PMID 19994843 DOI: 10.1021/ci900388a |
0.75 |
|
| 2009 |
Agostino M, Sandrin MS, Thompson PE, Yuriev E, Ramsland PA. In silico analysis of antibody-carbohydrate interactions and its application to xenoreactive antibodies. Molecular Immunology. 47: 233-46. PMID 19828202 DOI: 10.1016/j.molimm.2009.09.031 |
0.728 |
|
| 2009 |
Yuriev E, Agostino M, Farrugia W, Christiansen D, Sandrin MS, Ramsland PA. Structural biology of carbohydrate xenoantigens. Expert Opinion On Biological Therapy. 9: 1017-29. PMID 19591628 DOI: 10.1517/14712590903066703 |
0.722 |
|
| 2008 |
Cendron AC, Wines BD, Brownlee RT, Ramsland PA, Pietersz GA, Hogarth PM. An FcgammaRIIa-binding peptide that mimics the interaction between FcgammaRIIa and IgG. Molecular Immunology. 45: 307-19. PMID 17673295 DOI: 10.1016/J.Molimm.2007.06.152 |
0.356 |
|
| 2007 |
Ramsland PA, Willoughby N, Trist HM, Farrugia W, Hogarth PM, Fraser JD, Wines BD. Structural basis for evasion of IgA immunity by Staphylococcus aureus revealed in the complex of SSL7 with Fc of human IgA1. Proceedings of the National Academy of Sciences of the United States of America. 104: 15051-6. PMID 17848512 DOI: 10.1073/pnas.0706028104 |
0.305 |
|
| 2007 |
Milland J, Yuriev E, Xing PX, McKenzie IF, Ramsland PA, Sandrin MS. Carbohydrate residues downstream of the terminal Galalpha(1,3)Gal epitope modulate the specificity of xenoreactive antibodies. Immunology and Cell Biology. 85: 623-32. PMID 17724458 DOI: 10.1038/Sj.Icb.7100111 |
0.466 |
|
| 2006 |
Ramsland PA, Terzyan SS, Cloud G, Bourne CR, Farrugia W, Tribbick G, Geysen HM, Moomaw CR, Slaughter CA, Edmundson AB. Crystal structure of a glycosylated Fab from an IgM cryoglobulin with properties of a natural proteolytic antibody. The Biochemical Journal. 395: 473-81. PMID 16422668 DOI: 10.1042/Bj20051739 |
0.346 |
|
| 2005 |
Yuriev E, Farrugia W, Scott AM, Ramsland PA. Three-dimensional structures of carbohydrate determinants of Lewis system antigens: implications for effective antibody targeting of cancer. Immunology and Cell Biology. 83: 709-17. PMID 16266323 DOI: 10.1111/j.1440-1711.2005.01374.x |
0.359 |
|
| 2005 |
Schluter SF, Jensen I, Ramsland PA, Marchalonis JJ. Recombinant shark natural antibodies to thyroglobulin. Journal of Molecular Recognition : Jmr. 18: 404-12. PMID 15954089 DOI: 10.1002/Jmr.742 |
0.382 |
|
| 2004 |
Ramsland PA, Farrugia W, Bradford TM, Hogarth PM, Scott AM. Structural convergence of antibody binding of carbohydrate determinants in Lewis Y tumor antigens. Journal of Molecular Biology. 340: 809-818. PMID 15223322 DOI: 10.1016/J.Jmb.2004.05.037 |
0.388 |
|
| 2004 |
Terzyan S, Ramsland PA, Voss EW, Herron JN, Edmundson AB. Three-dimensional structures of idiotypically related Fabs with intermediate and high affinity for fluorescein. Journal of Molecular Biology. 339: 1141-51. PMID 15178254 DOI: 10.1016/J.Jmb.2004.03.080 |
0.416 |
|
| 2004 |
Xu Y, Ramsland PA, Davies JM, Scealy M, Nandakumar KS, Holmdahl R, Rowley MJ. Two monoclonal antibodies to precisely the same epitope of type II collagen select non-crossreactive phage clones by phage display: implications for autoimmunity and molecular mimicry. Molecular Immunology. 41: 411-9. PMID 15163538 DOI: 10.1016/j.molimm.2004.03.025 |
0.375 |
|
| 2003 |
Gonzalez ML, Frank MB, Ramsland PA, Hanas JS, Waxman FJ. Structural analysis of IgG2A monoclonal antibodies in relation to complement deposition and renal immune complex deposition. Molecular Immunology. 40: 307-17. PMID 14522012 DOI: 10.1016/S0161-5890(03)00167-6 |
0.34 |
|
| 2003 |
Ramsland PA, Farrugia W. Crystal structures of human antibodies: a detailed and unfinished tapestry of immunoglobulin gene products. Journal of Molecular Recognition : Jmr. 15: 248-59. PMID 12447901 DOI: 10.1002/jmr.585 |
0.31 |
|
| Show low-probability matches. |