Raja Mazumder, Ph.D.
Affiliations: | 2000 | Virginia Polytechnic Institute and State University, Blacksburg, VA, United States |
Area:
Microbiology BiologyGoogle:
"Raja Mazumder"Parents
Sign in to add mentor| Robert E. Benoit | grad student | 2000 | Virginia Tech | |
| (Substrate regulated microaerophily and chemotaxis by Pseudomonas jessenii strain VT10.) | ||||
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Publications
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| King CH, Desai H, Sylvetsky AC, et al. (2019) Baseline human gut microbiota profile in healthy people and standard reporting template. Plos One. 14: e0206484 |
| Kim B, Ali T, Dong C, et al. (2019) miCloud: A Plug-n-Play, Extensible, On-Premises Bioinformatics Cloud for Seamless Execution of Complex Next-Generation Sequencing Data Analysis Pipelines. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology |
| Torcivia-Rodriguez J, Dingerdissen H, Chang TC, et al. (2019) A Primer for Access to Repositories of Cancer-Related Genomic Big Data. Methods in Molecular Biology (Clifton, N.J.). 1878: 1-37 |
| Alterovitz G, Dean D, Goble C, et al. (2018) Enabling precision medicine via standard communication of HTS provenance, analysis, and results. Plos Biology. 16: e3000099 |
| Dingerdissen HM, Torcivia-Rodriguez J, Hu Y, et al. (2018) BioMuta and BioXpress: mutation and expression knowledgebases for cancer biomarker discovery. Nucleic Acids Research. 46: D1128-D1136 |
| Fan Y, Hu Y, Yan C, et al. (2018) Loss and gain of N-linked glycosylation sequons due to single-nucleotide variation in cancer. Scientific Reports. 8: 4322 |
| Karagiannis K, Simonyan V, Chumakov K, et al. (2017) Separation and assembly of deep sequencing data into discrete sub-population genomes. Nucleic Acids Research |
| Pan Y, Yan C, Hu Y, et al. (2017) Distribution bias analysis of germline and somatic single-nucleotide variations that impact protein functional site and neighboring amino acids. Scientific Reports. 7: 42169 |
| Gulzar N, Dingerdissen H, Yan C, et al. (2017) Impact of Nonsynonymous Single-Nucleotide Variations on Post-Translational Modification Sites in Human Proteins. Methods in Molecular Biology (Clifton, N.J.). 1558: 159-190 |
| Chen C, Huang H, Mazumder R, et al. (2016) Computational clustering for viral reference proteomes. Bioinformatics (Oxford, England) |