John R. Erb-Downward, Ph.D.

Affiliations: 
2005 University of Michigan, Ann Arbor, Ann Arbor, MI 
Area:
Biochemistry, Microbiology Biology
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"John Erb-Downward"

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Gary B. Huffnagle grad student 2005 University of Michigan
 (Characterization of prostaglandin formation pathways and long -chain fatty acid utilization in the pathogenic fungus Cryptococcus neoformans.)
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Publications

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Zeise KD, Erb-Downward JR, Huffnagle GB. (2025) Transcriptomic insights into adaptation to an anaerobic environment. Microbiology Spectrum. e0302424
Spurgeon K, Erb-Downward JR, Huffnagle GB, et al. (2025) Complete genome sequence of T05-04. Microbiology Resource Announcements. e0014425
Combs MP, Luth JE, Falkowski NR, et al. (2024) The Lung Microbiome Predicts Mortality and Response to Azithromycin in Lung Transplant Patients with Chronic Rejection. American Journal of Respiratory and Critical Care Medicine
Opron K, Begley LA, Erb-Downward JR, et al. (2024) Loss of Airway Phylogenetic Diversity Is Associated with Clinical and Pathobiological Markers of Disease Development in COPD. American Journal of Respiratory and Critical Care Medicine
Madapoosi SS, Cruickshank-Quinn C, Opron K, et al. (2022) Lung Microbiota and Metabolites Collectively Associate with Clinical Outcomes in Milder Stage COPD. American Journal of Respiratory and Critical Care Medicine
Lipinski JH, Erb-Downward JR, Huffnagle GB, et al. (2022) Toll-Interacting Protein and Altered Lung Microbiota in Idiopathic Pulmonary Fibrosis. American Journal of Respiratory and Critical Care Medicine
Ravi K, Erb-Downward JR, Gammon NK, et al. (2021) Complete Genome Sequences of Pseudomonas lundensis Strains M101 and M105, Isolated from 1% Pasteurized Milk. Microbiology Resource Announcements. 10: e0071121
Lipinski JH, Falkowski NR, Huffnagle GB, et al. (2021) Toll-like receptors, environmental caging and lung dysbiosis. American Journal of Physiology. Lung Cellular and Molecular Physiology
Garg S, Ranjan P, Erb-Downward JR, et al. (2021) High-Quality Genome Reconstruction of Candida albicans CHN1 Using Nanopore and Illumina Sequencing and Hybrid Assembly. Microbiology Resource Announcements. 10: e0029921
Opron K, Begley LA, Erb-Downward JR, et al. (2021) Lung microbiota associations with clinical features of COPD in the SPIROMICS cohort. Npj Biofilms and Microbiomes. 7: 14
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