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Jian Ma, Ph.D. - Publications

Affiliations: 
2006 Pennsylvania State University, State College, PA, United States 
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Year Citation  Score
2023 Kumar P, Gholamalamdari O, Zhang Y, Zhang L, Vertii A, van Schaik T, Peric-Hupkes D, Sasaki T, Gilbert DM, van Steensel B, Ma J, Kaufman PD, Belmont AS. Nucleolus and centromere TSA-Seq reveals variable localization of heterochromatin in different cell types. Biorxiv : the Preprint Server For Biology. PMID 37961445 DOI: 10.1101/2023.10.29.564613  0.312
2023 Calandrelli R, Wen X, Charles Richard JL, Luo Z, Nguyen TC, Chen CJ, Qi Z, Xue S, Chen W, Yan Z, Wu W, Zaleta-Rivera K, Hu R, Yu M, Wang Y, ... ... Ma J, et al. Genome-wide analysis of the interplay between chromatin-associated RNA and 3D genome organization in human cells. Nature Communications. 14: 6519. PMID 37845234 DOI: 10.1038/s41467-023-42274-7  0.331
2023 Zhang Y, Boninsegna L, Yang M, Misteli T, Alber F, Ma J. Computational methods for analysing multiscale 3D genome organization. Nature Reviews. Genetics. PMID 37673975 DOI: 10.1038/s41576-023-00638-1  0.408
2023 Zhou T, Zhang R, Jia D, Doty RT, Munday AD, Gao D, Xin L, Abkowitz JL, Duan Z, Ma J. Concurrent profiling of multiscale 3D genome organization and gene expression in single mammalian cells. Biorxiv : the Preprint Server For Biology. PMID 37546900 DOI: 10.1101/2023.07.20.549578  0.362
2023 Dekker J, Alber F, Aufmkolk S, Beliveau BJ, Bruneau BG, Belmont AS, Bintu L, Boettiger A, Calandrelli R, Disteche CM, Gilbert DM, Gregor T, Hansen AS, Huang B, Huangfu D, ... ... Ma J, et al. Spatial and temporal organization of the genome: Current state and future aims of the 4D nucleome project. Molecular Cell. PMID 37419111 DOI: 10.1016/j.molcel.2023.06.018  0.35
2023 Yang M, Ma J. UNADON: transformer-based model to predict genome-wide chromosome spatial position. Bioinformatics (Oxford, England). 39: i553-i562. PMID 37387176 DOI: 10.1093/bioinformatics/btad246  0.355
2023 Yang M, Ma J. UNADON: Transformer-based model to predict genome-wide chromosome spatial position. Arxiv. PMID 37163136  0.319
2023 Kamat K, Lao Z, Qi Y, Wang Y, Ma J, Zhang B. Compartmentalization with nuclear landmarks yields random, yet precise, genome organization. Biophysical Journal. PMID 36871158 DOI: 10.1016/j.bpj.2023.03.003  0.336
2022 Locke DP, Hillier LW, Warren WC, Worley KC, Nazareth LV, Muzny DM, Yang SP, Wang Z, Chinwalla AT, Minx P, Mitreva M, Cook L, Delehaunty KD, Fronick C, Schmidt H, ... ... Ma J, et al. Author Correction: Comparative and demographic analysis of orang-utan genomes. Nature. PMID 35962045 DOI: 10.1038/s41586-022-04799-7  0.691
2022 Kuang W, Zhang L, Ye L, Ma J, Shi X, Lin Y, Sun X, Cui R. Genome and Transcriptome Sequencing Analysis of Fusarium Provides Insights into the Pathogenic Mechanisms of the Lotus Rhizome Rot. Microbiology Spectrum. e0017522. PMID 35867414 DOI: 10.1128/spectrum.00175-22  0.425
2022 Peng Y, Yan H, Guo L, Deng C, Wang C, Wang Y, Kang L, Zhou P, Yu K, Dong X, Liu X, Sun Z, Peng Y, Zhao J, Deng D, ... ... Ma J, et al. Reference genome assemblies reveal the origin and evolution of allohexaploid oat. Nature Genetics. PMID 35851189 DOI: 10.1038/s41588-022-01127-7  0.467
2022 Yang M, Ma J. Machine learning methods for exploring sequence determinants of 3D genome organization. Journal of Molecular Biology. 167666. PMID 35659533 DOI: 10.1016/j.jmb.2022.167666  0.389
2021 Li C, Wang G, Li H, Wang G, Ma J, Zhao X, Huo L, Zhang L, Jiang Y, Zhang J, Liu G, Liu G, Cheng R, Wei J, Yao L. High-depth resequencing of 312 accessions reveals the local adaptation of foxtail millet. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 33566123 DOI: 10.1007/s00122-020-03760-4  0.33
2020 Tao Y, Lei H, Lee AV, Ma J, Schwartz R. Neural Network Deconvolution Method for Resolving Pathway-Level Progression of Tumor Clonal Expression Programs With Application to Breast Cancer Brain Metastases. Frontiers in Physiology. 11: 1055. PMID 33013452 DOI: 10.3389/Fphys.2020.01055  0.359
2020 Tao Y, Lei H, Fu X, Lee AV, Ma J, Schwartz R. Robust and accurate deconvolution of tumor populations uncovers evolutionary mechanisms of breast cancer metastasis. Bioinformatics (Oxford, England). 36: i407-i416. PMID 32657393 DOI: 10.1093/Bioinformatics/Btaa396  0.358
2020 Zhang R, Ma J. MATCHA: Probing multi-way chromatin interaction with hypergraph representation learning. Cell Systems. 10: 397-407.e5. PMID 32550271 DOI: 10.1016/J.Cels.2020.04.004  0.363
2020 Lazzarotto CR, Malinin NL, Li Y, Zhang R, Yang Y, Lee G, Cowley E, He Y, Lan X, Jividen K, Katta V, Kolmakova NG, Petersen CT, Qi Q, Strelcov E, ... ... Ma J, et al. CHANGE-seq reveals genetic and epigenetic effects on CRISPR-Cas9 genome-wide activity. Nature Biotechnology. PMID 32541958 DOI: 10.1038/S41587-020-0555-7  0.421
2020 Tian D, Zhang R, Zhang Y, Zhu X, Ma J. MOCHI enables discovery of heterogeneous interactome modules in 3D nucleome. Genome Research. PMID 31907193 DOI: 10.1101/Gr.250316.119  0.344
2019 Singh S, Yang Y, Póczos B, Ma J. Predicting enhancer-promoter interaction from genomic sequence with deep neural networks. Quantitative Biology (Beijing, China). 7: 122-137. PMID 34113473 DOI: 10.1007/s40484-019-0154-0  0.336
2019 Xiong K, Ma J. Revealing Hi-C subcompartments by imputing inter-chromosomal chromatin interactions. Nature Communications. 10: 5069. PMID 31699985 DOI: 10.1038/S41467-019-12954-4  0.413
2019 Farré M, Li Q, Darolti I, Zhou Y, Damas J, Proskuryakova AA, Kulemzina AI, Chemnick LG, Kim J, Ryder OA, Ma J, Graphodatsky AS, Zhang G, Larkin DM, Lewin HA. An integrated chromosome-scale genome assembly of the Masai giraffe (Giraffa camelopardalis tippelskirchi). Gigascience. 8. PMID 31367745 DOI: 10.1093/Gigascience/Giz090  0.447
2019 Yang Y, Zhang Y, Ren B, Dixon JR, Ma J. Comparing 3D Genome Organization in Multiple Species Using Phylo-HMRF. Cell Systems. PMID 31229558 DOI: 10.1016/J.Cels.2019.05.011  0.439
2019 Farré M, Kim J, Proskuryakova AA, Zhang Y, Kulemzina AI, Li Q, Zhou Y, Xiong Y, Johnson JL, Perelman P, Johnson WE, Warren WC, Kukekova AV, Zhang G, O'Brien SJ, ... ... Ma J, et al. Evolution of gene regulation in ruminants differs between evolutionary breakpoint regions and homologous synteny blocks. Genome Research. PMID 30760546 DOI: 10.1101/Gr.239863.118  0.366
2019 Ma J, Duan Z. Replication Timing Becomes Intertwined with 3D Genome Organization. Cell. 176: 681-684. PMID 30735630 DOI: 10.1016/J.Cell.2019.01.027  0.388
2019 Farré M, Li Q, Zhou Y, Damas J, Chemnick LG, Kim J, Ryder OA, Ma J, Zhang G, Larkin DM, Lewin HA. A Near-Chromosome-Scale genome assembly of the gemsbok (Oryx gazella): an iconic antelope of the Kalahari Desert. Gigascience. PMID 30649288 DOI: 10.1093/Gigascience/Giy162  0.414
2018 Jadaliha M, Gholamalamdari O, Tang W, Zhang Y, Petracovici A, Hao Q, Tariq A, Kim TG, Holton SE, Singh DK, Li XL, Freier SM, Ambs S, Bhargava R, Lal A, ... ... Ma J, et al. A natural antisense lncRNA controls breast cancer progression by promoting tumor suppressor gene mRNA stability. Plos Genetics. 14: e1007802. PMID 30496290 DOI: 10.1371/Journal.Pgen.1007802  0.325
2018 Chen Y, Zhang Y, Wang Y, Zhang L, Brinkman EK, Adam SA, Goldman R, van Steensel B, Ma J, Belmont AS. Mapping 3D genome organization relative to nuclear compartments using TSA-Seq as a cytological ruler. The Journal of Cell Biology. PMID 30154186 DOI: 10.1083/Jcb.201807108  0.416
2018 Yang Y, Gu Q, Zhang Y, Sasaki T, Crivello J, O'Neill RJ, Gilbert DM, Ma J. Continuous-Trait Probabilistic Model for Comparing Multi-species Functional Genomic Data. Cell Systems. PMID 29936186 DOI: 10.1016/J.Cels.2018.05.022  0.444
2018 Tasan I, Sustackova G, Zhang L, Kim J, Sivaguru M, HamediRad M, Wang Y, Genova J, Ma J, Belmont AS, Zhao H. CRISPR/Cas9-mediated knock-in of an optimized TetO repeat for live cell imaging of endogenous loci. Nucleic Acids Research. PMID 29912475 DOI: 10.1093/Nar/Gky501  0.39
2018 Rajaraman A, Ma J. Toward Recovering Allele-specific Cancer Genome Graphs. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. PMID 29658776 DOI: 10.1089/cmb.2018.0022  0.334
2017 Shen H, Ma J. Privacy Challenges of Genomic Big Data. Advances in Experimental Medicine and Biology. 1028: 139-148. PMID 29058220 DOI: 10.1007/978-981-10-6041-0_8  0.426
2017 Yang Y, Zhang R, Singh S, Ma J. Exploiting sequence-based features for predicting enhancer-promoter interactions. Bioinformatics (Oxford, England). 33: i252-i260. PMID 28881991 DOI: 10.1093/Bioinformatics/Btx257  0.396
2017 Kim J, Farré M, Auvil L, Capitanu B, Larkin DM, Ma J, Lewin HA. Reconstruction and evolutionary history of eutherian chromosomes. Proceedings of the National Academy of Sciences of the United States of America. PMID 28630326 DOI: 10.1073/Pnas.1702012114  0.411
2016 Rajaraman A, Ma J. Reconstructing ancestral gene orders with duplications guided by synteny level genome reconstruction. Bmc Bioinformatics. 17: 414. PMID 28185565 DOI: 10.1186/S12859-016-1262-8  0.4
2016 Bryan C, Guterman G, Ma KL, Lewin H, Larkin D, Kim J, Ma J, Farre M. Synteny Explorer: An Interactive Visualization Application for Teaching Genome Evolution. Ieee Transactions On Visualization and Computer Graphics. PMID 27845661 DOI: 10.1109/Tvcg.2016.2598789  0.378
2016 Hou JP, Emad A, Puleo GJ, Ma J, Milenkovic O. A new correlation clustering method for cancer mutation analysis. Bioinformatics (Oxford, England). PMID 27540270 DOI: 10.1093/Bioinformatics/Btw546  0.325
2016 Bryan C, Guterman G, Ma KL, Lewin H, Larkin D, Kim J, Ma J, Farre M. Synteny Explorer: An Interactive Visualization Application for Teaching Genome Evolution. Ieee Transactions On Visualization and Computer Graphics. PMID 27514049 DOI: 10.1109/TVCG.2016.2598460  0.321
2016 Li Y, Zhou S, Schwartz DC, Ma J. Allele-Specific Quantification of Structural Variations in Cancer Genomes. Cell Systems. PMID 27453446 DOI: 10.1016/J.Cels.2016.05.007  0.518
2016 Ma J, Köster J, Qin Q, Hu S, Li W, Chen C, Cao Q, Wang J, Mei S, Liu Q, Xu H, Liu XS. CRISPR-DO for genome-wide CRISPR design and optimization. Bioinformatics (Oxford, England). PMID 27402906 DOI: 10.1093/Bioinformatics/Btw476  0.339
2016 Zhang XW, Li SY, Zhang LL, Yang Q, Jiang QT, Ma J, Qi PF, Li W, Chen GY, Lan XJ, Deng M, Lu ZX, Liu C, Wei YM, Zheng YL. Structure and expression analysis of genes encoding ADP-glucose pyrophosphorylase large subunit in wheat and its relatives. Genome / National Research Council Canada = Genome / Conseil National De Recherches Canada. 1-7. PMID 27299732 DOI: 10.1139/gen-2016-0007  0.304
2016 Heo Y, Ramachandran A, Hwu WM, Ma J, Chen D. BLESS 2: Accurate, memory-efficient, and fast error correction method. Bioinformatics (Oxford, England). PMID 27153708 DOI: 10.1093/Bioinformatics/Btw146  0.318
2016 He F, Li Y, Tang YH, Ma J, Zhu H. Identifying micro-inversions using high-throughput sequencing reads. Bmc Genomics. 17: 4. PMID 26818118 DOI: 10.1186/S12864-015-2305-7  0.45
2015 Qiao L, Zhang X, Han X, Zhang L, Li X, Zhan H, Ma J, Luo P, Zhang W, Cui L, Li X, Chang Z. A genome-wide analysis of the auxin/indole-3-acetic acid gene family in hexaploid bread wheat (Triticum aestivum L.). Frontiers in Plant Science. 6: 770. PMID 26483801 DOI: 10.3389/fpls.2015.00770  0.311
2015 Fang X, Nevo E, Han L, Levanon EY, Zhao J, Avivi A, Larkin D, Jiang X, Feranchuk S, Zhu Y, Fishman A, Feng Y, Sher N, Xiong Z, Hankeln T, ... ... Ma J, et al. Corrigendum: Genome-wide adaptive complexes to underground stresses in blind mole rats Spalax. Nature Communications. 6: 8051. PMID 26264976 DOI: 10.1038/Ncomms9051  0.357
2015 Silva GO, He X, Parker JS, Gatza ML, Carey LA, Hou JP, Moulder SL, Marcom PK, Ma J, Rosen JM, Perou CM. Cross-species DNA copy number analyses identifies multiple 1q21-q23 subtype-specific driver genes for breast cancer. Breast Cancer Research and Treatment. PMID 26109346 DOI: 10.1007/S10549-015-3476-2  0.324
2015 Gupta A, Place M, Goldstein S, Sarkar D, Zhou S, Potamousis K, Kim J, Flanagan C, Li Y, Newton MA, Callander NS, Hematti P, Bresnick EH, Ma J, Asimakopoulos F, et al. Single-molecule analysis reveals widespread structural variation in multiple myeloma. Proceedings of the National Academy of Sciences of the United States of America. 112: 7689-94. PMID 26056298 DOI: 10.1073/Pnas.1418577112  0.447
2014 Rittschof CC, Bukhari SA, Sloofman LG, Troy JM, Caetano-Anollés D, Cash-Ahmed A, Kent M, Lu X, Sanogo YO, Weisner PA, Zhang H, Bell AM, Ma J, Sinha S, Robinson GE, et al. Neuromolecular responses to social challenge: common mechanisms across mouse, stickleback fish, and honey bee. Proceedings of the National Academy of Sciences of the United States of America. 111: 17929-34. PMID 25453090 DOI: 10.1073/Pnas.1420369111  0.334
2014 Earl D, Nguyen N, Hickey G, Harris RS, Fitzgerald S, Beal K, Seledtsov I, Molodtsov V, Raney BJ, Clawson H, Kim J, Kemena C, Chang JM, Erb I, Poliakov A, ... ... Ma J, et al. Alignathon: a competitive assessment of whole-genome alignment methods. Genome Research. 24: 2077-89. PMID 25273068 DOI: 10.1101/Gr.174920.114  0.374
2014 Fang X, Nevo E, Han L, Levanon EY, Zhao J, Avivi A, Larkin D, Jiang X, Feranchuk S, Zhu Y, Fishman A, Feng Y, Sher N, Xiong Z, Hankeln T, ... ... Ma J, et al. Genome-wide adaptive complexes to underground stresses in blind mole rats Spalax. Nature Communications. 5: 3966. PMID 24892994 DOI: 10.1038/Ncomms4966  0.416
2014 Shen B, Ma J, Wang J, Wang J. Biomedical informatics and computational biology for high-throughput data analysis. Thescientificworldjournal. 2014: 398181. PMID 24688384 DOI: 10.1155/2014/398181  0.324
2014 Elsik CG, Worley KC, Bennett AK, Beye M, Camara F, Childers CP, de Graaf DC, Debyser G, Deng J, Devreese B, Elhaik E, Evans JD, Foster LJ, Graur D, Guigo R, ... ... Ma J, et al. Finding the missing honey bee genes: lessons learned from a genome upgrade. Bmc Genomics. 15: 86. PMID 24479613 DOI: 10.1186/1471-2164-15-86  0.48
2014 Heo Y, Wu XL, Chen D, Ma J, Hwu WM. BLESS: bloom filter-based error correction solution for high-throughput sequencing reads. Bioinformatics (Oxford, England). 30: 1354-62. PMID 24451628 DOI: 10.1093/Bioinformatics/Btu030  0.376
2014 Burns PD, Li Y, Ma J, Borodovsky M. UnSplicer: Mapping spliced RNA-seq reads in compact genomes and filtering noisy splicing Nucleic Acids Research. 42: e25. PMID 24259430 DOI: 10.1093/Nar/Gkt1141  0.397
2014 Kim J, Ma J. PSAR-Align: Improving multiple sequence alignment using probabilistic sampling Bioinformatics. 30: 1010-1012. PMID 24222208 DOI: 10.1093/Bioinformatics/Btt636  0.301
2014 Hou JP, Ma J. DawnRank: Discovering personalized driver genes in cancer Genome Medicine. 6. DOI: 10.1186/S13073-014-0056-8  0.373
2013 Li-Byarlay H, Li Y, Stroud H, Feng S, Newman TC, Kaneda M, Hou KK, Worley KC, Elsik CG, Wickline SA, Jacobsen SE, Ma J, Robinson GE. RNA interference knockdown of DNA methyl-transferase 3 affects gene alternative splicing in the honey bee. Proceedings of the National Academy of Sciences of the United States of America. 110: 12750-5. PMID 23852726 DOI: 10.1073/Pnas.1310735110  0.306
2013 Cui Y, Lindo J, Hughes CE, Johnson JW, Hernandez AG, Kemp BM, Ma J, Cunningham R, Petzelt B, Mitchell J, Archer D, Cybulski JS, Malhi RS. Ancient DNA analysis of mid-holocene individuals from the Northwest Coast of North America reveals different evolutionary paths for mitogenomes. Plos One. 8: e66948. PMID 23843972 DOI: 10.1371/Journal.Pone.0066948  0.351
2013 Ge RL, Cai Q, Shen YY, San A, Ma L, Zhang Y, Yi X, Chen Y, Yang L, Huang Y, He R, Hui Y, Hao M, Li Y, Wang B, ... ... Ma J, et al. Draft genome sequence of the Tibetan antelope. Nature Communications. 4: 1858. PMID 23673643 DOI: 10.1038/Ncomms2860  0.404
2013 Kim J, Larkin DM, Cai Q, Asan, Zhang Y, Ge RL, Auvil L, Capitanu B, Zhang G, Lewin HA, Ma J. Reference-assisted chromosome assembly. Proceedings of the National Academy of Sciences of the United States of America. 110: 1785-90. PMID 23307812 DOI: 10.1073/Pnas.1220349110  0.425
2013 Li Y, Li-Byarlay H, Burns P, Borodovsky M, Robinson GE, Ma J. TrueSight: a new algorithm for splice junction detection using RNA-seq. Nucleic Acids Research. 41: e51. PMID 23254332 DOI: 10.1093/Nar/Gks1311  0.33
2012 Wu XL, Heo Y, El Hajj I, Hwu WM, Chen D, Ma J. TIGER: tiled iterative genome assembler. Bmc Bioinformatics. 13: S18. PMID 23281792 DOI: 10.1186/1471-2105-13-S19-S18  0.438
2012 Groenen MA, Archibald AL, Uenishi H, Tuggle CK, Takeuchi Y, Rothschild MF, Rogel-Gaillard C, Park C, Milan D, Megens HJ, Li S, Larkin DM, Kim H, Frantz LA, Caccamo M, ... ... Ma J, et al. Analyses of pig genomes provide insight into porcine demography and evolution. Nature. 491: 393-8. PMID 23151582 DOI: 10.1038/Nature11622  0.473
2012 Qiu Q, Zhang G, Ma T, Qian W, Wang J, Ye Z, Cao C, Hu Q, Kim J, Larkin DM, Auvil L, Capitanu B, Ma J, Lewin HA, Qian X, et al. The yak genome and adaptation to life at high altitude. Nature Genetics. 44: 946-9. PMID 22751099 DOI: 10.1038/Ng.2343  0.409
2012 Wang VW, Laborde RR, Asmann YW, Li Y, Ma J, Eckloff BW, Tombers NM, Olsen SM, Moore EJ, Olsen KD, Smith DI. Abstract 3100: Identifying novel chromosomal fusions out of RNAseq data from oropharyngeal cancers Cancer Research. 72: 3100-3100. DOI: 10.1158/1538-7445.Am2012-3100  0.356
2011 Kim J, Ma J. PSAR: Measuring multiple sequence alignment reliability by probabilistic sampling Nucleic Acids Research. 39: 6359-6368. PMID 21576232 DOI: 10.1093/Nar/Gkr334  0.352
2011 Ma J. Reconstructing the history of large-scale genomic changes: Biological questions and computational challenges Journal of Computational Biology. 18: 879-893. PMID 21563973 DOI: 10.1089/Cmb.2010.0189  0.455
2011 Li Y, Chien J, Smith DI, Ma J. FusionHunter: Identifying fusion transcripts in cancer using paired-end RNA-seq Bioinformatics. 27: 1708-1710. PMID 21546395 DOI: 10.1093/Bioinformatics/Btr265  0.395
2011 Paten B, Diekhans M, Earl D, John JS, Ma J, Suh B, Haussler D. Cactus graphs for genome comparisons Journal of Computational Biology. 18: 469-481. PMID 21385048 DOI: 10.1089/Cmb.2010.0252  0.357
2011 Locke DP, Hillier LW, Warren WC, Worley KC, Nazareth LV, Muzny DM, Yang SP, Wang Z, Chinwalla AT, Minx P, Mitreva M, Cook L, Delehaunty KD, Fronick C, Schmidt H, ... ... Ma J, et al. Comparative and demographic analysis of orang-utan genomes. Nature. 469: 529-33. PMID 21270892 DOI: 10.1038/Nature09687  0.719
2010 Li G, Ma J, Zhang L. Greedy selection of species for ancestral state reconstruction on phylogenies: Elimination is better than insertion Plos One. 5. PMID 20140213 DOI: 10.1371/Journal.Pone.0008985  0.381
2008 Ma J, Ratan A, Raney BJ, Suh BB, Miller W, Haussler D. The infinite sites model of genome evolution. Proceedings of the National Academy of Sciences of the United States of America. 105: 14254-61. PMID 18787111 DOI: 10.1073/Pnas.0805217105  0.704
2008 Ma J, Ratan A, Raney BJ, Suh BB, Zhang L, Miller W, Haussler D. DUPCAR: reconstructing contiguous ancestral regions with duplications. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 15: 1007-27. PMID 18774902 DOI: 10.1089/Cmb.2008.0069  0.69
2007 Gibbs RA, Rogers J, Katze MG, Bumgarner R, Weinstock GM, Mardis ER, Remington KA, Strausberg RL, Venter JC, Wilson RK, Batzer MA, Bustamante CD, Eichler EE, Hahn MW, ... ... Ma J, et al. Evolutionary and biomedical insights from the rhesus macaque genome. Science (New York, N.Y.). 316: 222-34. PMID 17431167 DOI: 10.1126/Science.1139247  0.705
2006 Ma J, Zhang L, Suh BB, Raney BJ, Burhans RC, Kent WJ, Blanchette M, Haussler D, Miller W. Reconstructing contiguous regions of an ancestral genome. Genome Research. 16: 1557-65. PMID 16983148 DOI: 10.1101/Gr.5383506  0.65
2005 Ovcharenko I, Loots GG, Giardine BM, Hou M, Ma J, Hardison RC, Stubbs L, Miller W. Mulan: multiple-sequence local alignment and visualization for studying function and evolution. Genome Research. 15: 184-94. PMID 15590941 DOI: 10.1101/Gr.3007205  0.602
Low-probability matches (unlikely to be authored by this person)
2022 Zhang R, Zhou T, Ma J. Ultrafast and interpretable single-cell 3D genome analysis with Fast-Higashi. Cell Systems. 13: 798-807.e6. PMID 36265466 DOI: 10.1016/j.cels.2022.09.004  0.299
2015 Ma J, Stiller J, Zheng Z, Liu YX, Wei Y, Zheng YL, Liu C. A high-throughput pipeline for detecting locus-specific polymorphism in hexaploid wheat (Triticum aestivum L.). Plant Methods. 11: 39. PMID 26244051 DOI: 10.1186/s13007-015-0082-6  0.291
2018 Ma S, Hsieh YP, Ma J, Lu C. Low-input and multiplexed microfluidic assay reveals epigenomic variation across cerebellum and prefrontal cortex. Science Advances. 4: eaar8187. PMID 29675472 DOI: 10.1126/Sciadv.Aar8187  0.291
2016 Siegel M, He X, Chen M, Hou J, Garrett A, Dye J, Silva G, Usary J, Moylan V, Brady C, Ma J, Thorne L, Hoadley K, Parker J, Anders C, et al. Abstract S4-01: Identification of early versus late drivers of breast tumors and metastasis Cancer Research. 76. DOI: 10.1158/1538-7445.Sabcs15-S4-01  0.29
2019 Kannan K, Shook M, Li Y, Robinson GE, Ma J. Comparative Analysis of Brain and Fat Body Gene Splicing Patterns in the Honey Bee, . G3 (Bethesda, Md.). PMID 30792192 DOI: 10.1534/G3.118.200857  0.288
2021 Zhou T, Zhang R, Ma J. The 3D Genome Structure of Single Cells. Annual Review of Biomedical Data Science. 4: 21-41. PMID 34465168 DOI: 10.1146/annurev-biodatasci-020121-084709  0.287
2013 Wang VW, Laborde RR, Asmann YW, Li Y, Ma J, Eckloff BW, Tombers NM, Olsen SM, Moore EJ, Olsen KD, Smith DI. Search for chromosome rearrangements: new approaches toward discovery of novel translocations in head and neck squamous cell carcinoma. Head & Neck. 35: 831-5. PMID 22807096 DOI: 10.1002/Hed.23037  0.286
2013 Ma J, Stiller J, Berkman PJ, Wei Y, Rogers J, Feuillet C, Dolezel J, Mayer KF, Eversole K, Zheng YL, Liu C. Sequence-based analysis of translocations and inversions in bread wheat (Triticum aestivum L.). Plos One. 8: e79329. PMID 24260197 DOI: 10.1371/journal.pone.0079329  0.286
2013 Ma J, He Y, Hu B, Luo ZQ. Genome Sequence of an Environmental Isolate of the Bacterial Pathogen Legionella pneumophila. Genome Announcements. 1. PMID 23792742 DOI: 10.1128/Genomea.00320-13  0.284
2020 Zhang L, Zhang Y, Chen Y, Gholamalamdari O, Wang Y, Ma J, Belmont AS. TSA-seq reveals a largely conserved genome organization relative to nuclear speckles with small position changes tightly correlated with gene expression changes. Genome Research. PMID 33355299 DOI: 10.1101/gr.266239.120  0.283
2020 Sun Q, Hao Q, Lin YC, Song YJ, Bangru S, Arif W, Tripathi V, Zhang Y, Cho JH, Freier SM, Jenkins L, Ma J, Yoon JH, Kalsotra A, Lal A, et al. Antagonism between Splicing and Microprocessor complex Dictates the Serum-induced Processing of Lnc-MIRHG for Efficient Cell Cycle Re-entry. Rna (New York, N.Y.). PMID 32675111 DOI: 10.1261/Rna.075309.120  0.282
2017 Singh DK, Gholamalamdari O, Jadaliha M, Ling Li X, Lin YC, Zhang Y, Guang S, Hashemikhabir S, Tiwari S, Zhu YJ, Khan A, Thomas A, Chakraborty A, Macias V, Balla AK, ... ... Ma J, et al. PSIP1/p75 promotes tumorigenicity in breast cancer cells by promoting the transcription of cell cycle genes. Carcinogenesis. PMID 28633434 DOI: 10.1093/Carcin/Bgx062  0.282
2017 Liu Q, Wang XF, Du C, Lin YZ, Ma J, Wang YH, Zhou JH, Wang X. The integration of a macrophage-adapted live vaccine strain of equine infectious anaemia virus (EIAV) in the horse genome. The Journal of General Virology. PMID 28884679 DOI: 10.1099/jgv.0.000918  0.28
2015 Bertozzi C, Ge H, Ma J, Milenkovic O. Expanding the Biology Toolkit Cell. 163: 1306. DOI: 10.1016/J.Cell.2015.11.043  0.277
2014 Seok S, Fu T, Choi SE, Li Y, Zhu R, Kumar S, Sun X, Yoon G, Kang Y, Zhong W, Ma J, Kemper B, Kemper JK. Transcriptional regulation of autophagy by an FXR-CREB axis. Nature. 516: 108-11. PMID 25383523 DOI: 10.1038/Nature13949  0.274
2019 Tariq A, Hao Q, Sun Q, Singh DK, Jadaliha M, Zhang Y, Chetlangia N, Ma J, Holton S, Bhargava R, Lal A, Prasanth SG, Prasanth KV. LncRNA-mediated regulation of SOX9 expression in basal sub-type breast cancer cells. Rna (New York, N.Y.). PMID 31690584 DOI: 10.1261/Rna.073254.119  0.272
2014 Ma J, Stiller J, Wei Y, Zheng YL, Devos KM, Doležel J, Liu C. Extensive pericentric rearrangements in the bread wheat (Triticum aestivum L.) genotype "Chinese Spring" revealed from chromosome shotgun sequence data. Genome Biology and Evolution. 6: 3039-48. PMID 25349265 DOI: 10.1093/gbe/evu237  0.271
2015 Ma J, Gao S, Stiller J, Jiang QT, Lan XJ, Liu YX, Pu ZE, Wang J, Wei Y, Zheng YL. Identification of genes bordering breakpoints of the pericentric inversions on 2B, 4B, and 5A in bread wheat (Triticum aestivum L.). Genome / National Research Council Canada = Genome / Conseil National De Recherches Canada. 1-6. PMID 26356308 DOI: 10.1139/gen-2015-0060  0.269
2003 Zhong Y, Zhang X, Ma J, Zhang L. Rapid Development of Bioinformatics Education in China Journal of Biological Education. 37: 75-78. DOI: 10.1080/00219266.2003.9655855  0.269
2023 Xiong K, Zhang R, Ma J. scGHOST: Identifying single-cell 3D genome subcompartments. Biorxiv : the Preprint Server For Biology. PMID 37292994 DOI: 10.1101/2023.05.24.542032  0.269
2024 Xiong K, Zhang R, Ma J. scGHOST: identifying single-cell 3D genome subcompartments. Nature Methods. PMID 38589516 DOI: 10.1038/s41592-024-02230-9  0.268
2022 Luo W, Zhou J, Liu J, Liu Y, Mu Y, Tang H, Xu Q, Deng M, Jiang Q, Chen G, Qi P, Wang J, Jiang Y, Chen Z, Zheng Z, ... ... Ma J, et al. Fine mapping of the gene in a chromosome variation region at the distal terminus of 1AS. Frontiers in Plant Science. 13: 1006510. PMID 36204068 DOI: 10.3389/fpls.2022.1006510  0.268
2014 Liu Y, Gu Q, Hou JP, Han J, Ma J. A network-assisted co-clustering algorithm to discover cancer subtypes based on gene expression. Bmc Bioinformatics. 15: 37. PMID 24491042 DOI: 10.1186/1471-2105-15-37  0.267
2021 Wang Y, Zhang Y, Zhang R, van Schaik T, Zhang L, Sasaki T, Peric-Hupkes D, Chen Y, Gilbert DM, van Steensel B, Belmont AS, Ma J. SPIN reveals genome-wide landscape of nuclear compartmentalization. Genome Biology. 22: 36. PMID 33446254 DOI: 10.1186/s13059-020-02253-3  0.267
2019 Kumar N, Verma R, Anand D, Zhou Y, Onder OF, Tsougenis E, Chen H, Heng PA, Li J, Hu Z, Wang Y, Koohbanani NA, Jahanifar M, Tajeddin NZ, Gooya A, ... ... Ma J, ... ... Ma J, et al. A Multi-organ Nucleus Segmentation Challenge. Ieee Transactions On Medical Imaging. PMID 31647422 DOI: 10.1109/Tmi.2019.2947628  0.265
2018 Ma J, Chang K, Peng J, Shi Q, Gan H, Gao K, Feng K, Xu F, Zhang H, Dai B, Zhu Y, Shi G, Shen Y, Zhu Y, Qin X, et al. SPOP promotes ATF2 ubiquitination and degradation to suppress prostate cancer progression. Journal of Experimental & Clinical Cancer Research : Cr. 37: 145. PMID 29996942 DOI: 10.1186/S13046-018-0809-0  0.265
2017 Jin X, Wang J, Gao K, Zhang P, Yao L, Tang Y, Tang L, Ma J, Xiao J, Zhang E, Zhu J, Zhang B, Zhao SM, Li Y, Ren S, et al. Dysregulation of INF2-mediated mitochondrial fission in SPOP-mutated prostate cancer. Plos Genetics. 13: e1006748. PMID 28448495 DOI: 10.1371/Journal.Pgen.1006748  0.262
2015 Kim YC, Byun S, Zhang Y, Seok S, Kemper B, Ma J, Kemper JK. Liver ChIP-seq analysis in FGF19-treated mice reveals SHP as a global transcriptional partner of SREBP-2. Genome Biology. 16: 268. PMID 26634251 DOI: 10.1186/S13059-015-0835-6  0.261
2016 Tian D, Gu Q, Ma J. Identifying gene regulatory network rewiring using latent differential graphical models. Nucleic Acids Research. PMID 27378774 DOI: 10.1093/Nar/Gkw581  0.259
2014 Hou JP, Ma J. DawnRank: discovering personalized driver genes in cancer. Genome Medicine. 6: 56. PMID 25177370 DOI: 10.1186/s13073-014-0056-8  0.254
2018 Seok S, Kim YC, Byun S, Choi S, Xiao Z, Iwamori N, Zhang Y, Wang C, Ma J, Ge K, Kemper B, Kemper JK. Fasting-induced JMJD3 histone demethylase epigenetically activates mitochondrial fatty acid β-oxidation. The Journal of Clinical Investigation. PMID 29911994 DOI: 10.1172/Jci97736  0.253
2015 Yazdi SMHT, Kiah HM, Garcia-Ruiz E, Ma J, Zhao H, Milenkovic O. DNA-Based Storage: Trends and Methods Ieee Transactions On Molecular, Biological and Multi-Scale Communications. 1: 230-248. DOI: 10.1109/Tmbmc.2016.2537305  0.251
2015 Ma J, Stiller J, Zheng Z, Wei Y, Zheng YL, Yan G, Doležel J, Liu C. Putative interchromosomal rearrangements in the hexaploid wheat (Triticum aestivum L.) genotype 'Chinese Spring' revealed by gene locations on homoeologous chromosomes. Bmc Evolutionary Biology. 15: 37. PMID 25880815 DOI: 10.1186/s12862-015-0313-5  0.249
2017 Byun S, Kim YC, Zhang Y, Kong B, Guo G, Sadoshima J, Ma J, Kemper B, Kemper JK. A postprandial FGF19-SHP-LSD1 regulatory axis mediates epigenetic repression of hepatic autophagy. The Embo Journal. PMID 28446510 DOI: 10.15252/Embj.201695500  0.244
2017 Xu F, Chang K, Ma J, Qu Y, Xie H, Dai B, Gan H, Zhang H, Shi G, Zhu Y, Zhu Y, Shen Y, Ye D. The Oncogenic Role of COL23A1 in Clear Cell Renal Cell Carcinoma. Scientific Reports. 7: 9846. PMID 28852123 DOI: 10.1038/S41598-017-10134-2  0.243
2014 Martignetti JA, Camacho-Vanegas O, Priedigkeit N, Camacho-Vanegas C, Pereira E, Lin L, Losic B, Shah h, Liao J, Ma J, Lahiri P, Chee M, Schadt E, Dottino P. Abstract 4712: Personalized ovarian cancer surveillance and detection of a therapeutic drug target in circulating tumor DNA Cancer Research. 74: 4712-4712. DOI: 10.1158/1538-7445.Am2014-4712  0.242
2014 Martignetti JA, Camacho-Vanegas O, Priedigkeit N, Camacho C, Pereira E, Lin L, Garnar-Wortzel L, Miller D, Losic B, Shah H, Liao J, Ma J, Lahiri P, Chee M, Schadt E, et al. Personalized ovarian cancer disease surveillance and detection of candidate therapeutic drug target in circulating tumor DNA. Neoplasia (New York, N.Y.). 16: 97-103. PMID 24563622 DOI: 10.1593/Neo.131900  0.241
2020 Byun S, Seok S, Kim YC, Zhang Y, Yau P, Iwamori N, Xu HE, Ma J, Kemper B, Kemper JK. Fasting-induced FGF21 signaling activates hepatic autophagy and lipid degradation via JMJD3 histone demethylase. Nature Communications. 11: 807. PMID 32042044 DOI: 10.1038/S41467-020-14384-Z  0.237
2019 Shi Q, Zhu Y, Ma J, Chang K, Ding D, Bai Y, Gao K, Zhang P, Mo R, Feng K, Zhao X, Zhang L, Sun H, Jiao D, Chen Y, et al. Prostate Cancer-associated SPOP mutations enhance cancer cell survival and docetaxel resistance by upregulating Caprin1-dependent stress granule assembly. Molecular Cancer. 18: 170. PMID 31771591 DOI: 10.1186/S12943-019-1096-X  0.235
2011 Zeng Z, Huang H, Zhang W, Xiang B, Zhou M, Zhou Y, Ma J, Yi M, Li X, Li X, Xiong W, Li G. Nasopharyngeal carcinoma: advances in genomics and molecular genetics. Science China. Life Sciences. 54: 966-75. PMID 22038010 DOI: 10.1007/s11427-011-4223-5  0.234
2020 Meng WL, Zhao MJ, Yang XB, Zhang AX, Wang NN, Xu ZS, Ma J. Examination of Genomic and Transcriptomic Alterations in a Morphologically Stable Line, MU1, Generated by Intergeneric Pollination. Genes. 11. PMID 32075264 DOI: 10.3390/genes11020199  0.233
2024 Gao S, Su Z, Ma J, Ma J, Liu C, Li H, Zheng Z. Identification of a novel and plant height-independent QTL for coleoptile length in barley and validation of its effect using near isogenic lines. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 137: 53. PMID 38381194 DOI: 10.1007/s00122-024-04561-9  0.233
2018 Kim YC, Seok S, Byun S, Kong B, Zhang Y, Guo G, Xie W, Ma J, Kemper B, Kemper JK. AhR and SHP regulate phosphatidylcholine and S-adenosylmethionine levels in the one-carbon cycle. Nature Communications. 9: 540. PMID 29416063 DOI: 10.1038/S41467-018-03060-Y  0.232
2015 Liu Q, Wang XF, Ma J, He XJ, Wang XJ, Zhou JH. Characterization of Equine Infectious Anemia Virus Integration in the Horse Genome. Viruses. 7: 3241-60. PMID 26102582 DOI: 10.3390/v7062769  0.232
2017 Cao Q, Ma J, Chen CH, Xu H, Chen Z, Li W, Liu XS. CRISPR-FOCUS: A web server for designing focused CRISPR screening experiments. Plos One. 12: e0184281. PMID 28873439 DOI: 10.1371/Journal.Pone.0184281  0.23
2020 Zhang Y, Xiao Y, Yang M, Ma J. Cancer mutational signatures representation by large-scale context embedding. Bioinformatics (Oxford, England). 36: i309-i316. PMID 32657413 DOI: 10.1093/Bioinformatics/Btaa433  0.229
2019 Yao F, Zhang X, Ye X, Li J, Long L, Yu C, Li J, Wang Y, Wu Y, Wang J, Jiang Q, Li W, Ma J, Wei Y, Zheng Y, et al. Characterization of molecular diversity and genome-wide association study of stripe rust resistance at the adult plant stage in Northern Chinese wheat landraces. Bmc Genetics. 20: 38. PMID 30914040 DOI: 10.1186/s12863-019-0736-x  0.229
2018 Chidester B, Do MN, Ma J. Discriminative bag-of-cells for imaging-genomics. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 23: 319-330. PMID 29218893  0.228
2014 Zhao S, Jiang QT, Ma J, Zhang XW, Zhao QZ, Wang XY, Wang CS, Cao X, Lu ZX, Zheng YL, Wei YM. Characterization and expression analysis of WOX5 genes from wheat and its relatives. Gene. 537: 63-9. PMID 24368329 DOI: 10.1016/j.gene.2013.12.022  0.228
2022 Liu J, Hu Y, Luo X, Castañeda-Ruíz RF, Ma J. Three novel species of (Massarinaceae, Pleosporales) from China. Mycokeys. 94: 73-89. PMID 36760542 DOI: 10.3897/mycokeys.94.95888  0.223
2021 Ma J, Li C, Zong M, Qiu Y, Liu Y, Huang Y, Xie Y, Zhang H, Wang J. CmFSI8/CmOFP13 gene encoding an OFP family protein controls fruit shape in melon (Cucumis melo L.). Journal of Experimental Botany. PMID 34849737 DOI: 10.1093/jxb/erab510  0.222
2015 Tabatabaei Yazdi SM, Yuan Y, Ma J, Zhao H, Milenkovic O. A Rewritable, Random-Access DNA-Based Storage System. Scientific Reports. 5: 14138. PMID 26382652 DOI: 10.1038/Srep14138  0.222
2017 Anantharaman A, Tripathi V, Khan A, Yoon JH, Singh DK, Gholamalamdari O, Guang S, Ohlson J, Wahlstedt H, Öhman M, Jantsch MF, Conrad NK, Ma J, Gorospe M, Prasanth SG, et al. ADAR2 regulates RNA stability by modifying access of decay-promoting RNA-binding proteins. Nucleic Acids Research. PMID 28053121 DOI: 10.1093/Nar/Gkw1304  0.221
2017 Ma J, Shen Z, Yu YC, Shi SH. Neural lineage tracing in the mammalian brain. Current Opinion in Neurobiology. 50: 7-16. PMID 29125960 DOI: 10.1016/J.Conb.2017.10.013  0.221
2017 Ma J, Yang Y, Luo W, Yang C, Ding P, Liu Y, Qiao L, Chang Z, Geng H, Wang P, Jiang Q, Wang J, Chen G, Wei Y, Zheng Y, et al. Genome-wide identification and analysis of the MADS-box gene family in bread wheat (Triticum aestivum L.). Plos One. 12: e0181443. PMID 28742823 DOI: 10.1371/journal.pone.0181443  0.217
2022 Qu X, Li C, Liu H, Liu J, Luo W, Xu Q, Tang H, Mu Y, Deng M, Pu Z, Ma J, Jiang Q, Chen G, Qi P, Jiang Y, ... ... Ma J, et al. Quick mapping and characterization of a co-located kernel length and thousand-kernel weight-related QTL in wheat. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 35804167 DOI: 10.1007/s00122-022-04154-4  0.216
2018 Zhang R, Wang Y, Yang Y, Zhang Y, Ma J. Predicting CTCF-mediated chromatin loops using CTCF-MP. Bioinformatics (Oxford, England). 34: i133-i141. PMID 29949986 DOI: 10.1093/bioinformatics/bty248  0.216
2012 Yu YC, He S, Chen S, Fu Y, Brown KN, Yao XH, Ma J, Gao KP, Sosinsky GE, Huang K, Shi SH. Preferential electrical coupling regulates neocortical lineage-dependent microcircuit assembly. Nature. 486: 113-7. PMID 22678291 DOI: 10.1038/Nature10958  0.215
2021 Lin Y, Zhou K, Hu H, Jiang X, Yu S, Wang Q, Li C, Ma J, Chen G, Yang Z, Liu Y. Multi-Locus Genome-Wide Association Study of Four Yield-Related Traits in Chinese Wheat Landraces. Frontiers in Plant Science. 12: 665122. PMID 34484253 DOI: 10.3389/fpls.2021.665122  0.215
2019 Ning C, Wang CC, Gao S, Yang Y, Zhang X, Wu X, Zhang F, Nie Z, Tang Y, Robbeets M, Ma J, Krause J, Cui Y. Ancient Genomes Reveal Yamnaya-Related Ancestry and a Potential Source of Indo-European Speakers in Iron Age Tianshan. Current Biology : Cb. PMID 31353181 DOI: 10.1016/J.Cub.2019.06.044  0.215
2019 Chidester B, Zhou T, Do MN, Ma J. Rotation equivariant and invariant neural networks for microscopy image analysis. Bioinformatics (Oxford, England). 35: i530-i537. PMID 31510662 DOI: 10.1093/Bioinformatics/Btz353  0.214
2022 Reilly A, Philip Creamer J, Stewart S, Stolla MC, Wang Y, Du J, Wellington R, Busch S, Estey EH, Becker PS, Fang M, Keel SB, Abkowitz JL, Soma LA, Ma J, et al. Lamin B1 deletion in myeloid neoplasms causes nuclear anomaly and altered hematopoietic stem cell function. Cell Stem Cell. PMID 35278369 DOI: 10.1016/j.stem.2022.02.010  0.214
2019 Kim YC, Jung H, Seok S, Zhang Y, Ma J, Li T, Kemper B, Kemper JK. MicroRNA-210 promotes bile acid-induced cholestatic liver injury by targeting mixed-lineage leukemia-4 methyltransferase in mice. Hepatology (Baltimore, Md.). PMID 31549733 DOI: 10.1002/Hep.30966  0.212
2014 Yokoyama KD, Zhang Y, Ma J. Tracing the evolution of lineage-specific transcription factor binding sites in a birth-death framework. Plos Computational Biology. 10: e1003771. PMID 25144359 DOI: 10.1371/journal.pcbi.1003771  0.21
2018 Xu F, Chang K, Ma J, Qu Y, Xie H, Dai B, Gan H, Zhang H, Shi G, Zhu Y, Zhu Y, Shen Y, Ye D. Author Correction: The Oncogenic Role of COL23A1 in Clear Cell Renal Cell Carcinoma. Scientific Reports. 8: 6001. PMID 29651135 DOI: 10.1038/S41598-018-23756-X  0.209
2017 Liu Y, Lin Y, Gao S, Li Z, Ma J, Deng M, Chen G, Wei Y, Zheng Y. A genome-wide association study of 23 agronomic traits in Chinese wheat landraces. The Plant Journal : For Cell and Molecular Biology. PMID 28628238 DOI: 10.1111/tpj.13614  0.209
2021 Zhong X, Feng X, Li Y, Guzmán C, Lin N, Xu Q, Zhang Y, Tang H, Qi PF, Deng M, Ma J, Wang JR, Chen GY, Lan XJ, Wei YM, et al. Genome-wide identification of the bZIP transcription factor genes related to starch synthesis in barley (Hordeum vulgare L.). Genome. PMID 34058097 DOI: 10.1139/gen-2020-0195  0.208
2023 Zhang X, Han W, Fan X, Wang Y, Xu D, Sun K, Wang W, Zhang Y, Ma J, Ye N. Gene duplication and functional divergence of new genes contributed to the polar acclimation of Antarctic green algae. Marine Life Science & Technology. 5: 511-524. PMID 38045541 DOI: 10.1007/s42995-023-00203-z  0.208
2016 Ma J, Zheng Z, Stiller J, Lan XJ, Liu Y, Deng M, Wang P, Pu Z, Chen G, Jiang QT, Wei Y, Zheng YL. Identification and characterization of genes on a single subgenome in the hexaploid wheat (Triticum aestivum L.) genotype 'Chinese Spring'. Genome. 1-8. PMID 28098486 DOI: 10.1139/gen-2016-0076  0.208
2011 Liu T, Ortiz JA, Taing L, Meyer CA, Lee B, Zhang Y, Shin H, Wong SS, Ma J, Lei Y, Pape UJ, Poidinger M, Chen Y, Yeung K, Brown M, et al. Cistrome: an integrative platform for transcriptional regulation studies. Genome Biology. 12: R83. PMID 21859476 DOI: 10.1186/Gb-2011-12-8-R83  0.207
2023 Huang J, Zhao G, Peng Q, Yi X, Ji L, Li J, Li P, Guan Y, Ge J, Chen L, Chen R, Hu X, Lee WC, Reuben A, Futreal PA, ... ... Ma J, et al. Analysis of genomic and immune intratumor heterogeneity in linitis plastica via multiregional exome and T-cell-receptor sequencing. Molecular Oncology. PMID 36703611 DOI: 10.1002/1878-0261.13381  0.206
2020 Gou X, Shi H, Yu S, Wang Z, Li C, Liu S, Ma J, Chen G, Liu T, Liu Y. SSRMMD: A Rapid and Accurate Algorithm for Mining SSR Feature Loci and Candidate Polymorphic SSRs Based on Assembled Sequences. Frontiers in Genetics. 11: 706. PMID 32849772 DOI: 10.3389/fgene.2020.00706  0.205
2014 Ma J, Yao XH, Fu Y, Yu YC. Development of layer 1 neurons in the mouse neocortex. Cerebral Cortex (New York, N.Y. : 1991). 24: 2604-18. PMID 23680842 DOI: 10.1093/Cercor/Bht114  0.205
2010 Yi H, Xue L, Guo MX, Ma J, Zeng Y, Wang W, Cai JY, Hu HM, Shu HB, Shi YB, Li WX. Gene expression atlas for human embryogenesis. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 24: 3341-50. PMID 20430792 DOI: 10.1096/fj.10-158782  0.205
2019 Su HG, Li B, Song XY, Ma J, Chen J, Zhou YB, Chen M, Min DH, Xu ZS, Ma YZ. Genome-Wide Analysis of the DYW Subgroup PPR Gene Family and Identification of Responses to Drought Stress. International Journal of Molecular Sciences. 20. PMID 31726763 DOI: 10.3390/ijms20225667  0.204
2020 Luo W, Liu J, Ding P, Li C, Liu H, Mu Y, Tang H, Jiang Q, Liu Y, Chen G, Chen G, Jiang Y, Qi P, Zheng Y, Wei Y, ... ... Ma J, et al. Transcriptome analysis of near-isogenic lines for glume hairiness of wheat. Gene. 144517. PMID 32113949 DOI: 10.1016/j.gene.2020.144517  0.204
2018 DENG M, HE Y, GOU L, YAO F, LI J, ZHANG X, LONG L, MA J, JIANG Q, LIU Y, WEI Y, CHEN G. Genetic Effects of Key Genomic Regions Controlling Yield-Related Traits in Wheat Founder Parent Fan 6 Acta Agronomica Sinica. 44: 706. DOI: 10.3724/sp.j.1006.2018.00706  0.202
2022 Li C, Ma J, Wang G, Li H, Wang H, Wang G, Jiang Y, Liu Y, Liu G, Liu G, Cheng R, Wang H, Wei J, Yao L. Exploring the Gene Family and Its Role in Heading Date in Foxtail Millet. Frontiers in Plant Science. 13: 863298. PMID 35755676 DOI: 10.3389/fpls.2022.863298  0.202
2015 Peng J, Ma J, Li W, Mo R, Zhang P, Gao K, Jin X, Xiao J, Wang C, Fan J. Stabilization of MCRS1 by BAP1 prevents chromosome instability in renal cell carcinoma. Cancer Letters. PMID 26300492 DOI: 10.1016/j.canlet.2015.08.013  0.202
2022 Melamed A, Fitzgerald TW, Wang Y, Ma J, Birney E, Bangham CRM. Selective clonal persistence of human retroviruses in vivo: Radial chromatin organization, integration site, and host transcription. Science Advances. 8: eabm6210. PMID 35486737 DOI: 10.1126/sciadv.abm6210  0.2
2019 Chai LJ, Lu ZM, Zhang XJ, Ma J, Xu PX, Qian W, Xiao C, Wang ST, Shen CH, Shi JS, Zheng-Hong X. Zooming in on Butyrate-Producing Clostridial Consortia in the Fermented Grains of Gene Sequence-Guided Microbial Isolation. Frontiers in Microbiology. 10: 1397. PMID 31316481 DOI: 10.3389/fmicb.2019.01397  0.2
2020 Li J, Jiang Y, Yao F, Long L, Wang Y, Wu Y, Li H, Wang J, Jiang Q, Kang H, Li W, Qi P, Ma J, Pu Z, Dai S, et al. Genome-Wide Association Study Reveals the Genetic Architecture of Stripe Rust Resistance at the Adult Plant Stage in Chinese Endemic Wheat Frontiers in Plant Science. 11. DOI: 10.3389/fpls.2020.00625  0.2
2019 Ye X, Li J, Cheng Y, Yao F, Long L, Yu C, Wang Y, Wu Y, Li J, Wang J, Jiang Q, Li W, Ma J, Wei Y, Zheng Y, et al. Genome-wide association study of resistance to stripe rust (Puccinia striiformis f. sp. tritici) in Sichuan wheat. Bmc Plant Biology. 19: 147. PMID 30991940 DOI: 10.1186/s12870-019-1764-4  0.199
1999 Konttinen YT, Ainola M, Valleala H, Ma J, Ida H, Mandelin J, Kinne RW, Santavirta S, Sorsa T, López-Otín C, Takagi M. Analysis of 16 different matrix metalloproteinases (MMP-1 to MMP-20) in the synovial membrane: different profiles in trauma and rheumatoid arthritis Annals of the Rheumatic Diseases. 58: 691-697. PMID 10531073 DOI: 10.1136/Ard.58.11.691  0.199
2000 Xu J, Ma J, Li T, Waris E, Alberty A, Santavirta S, Konttinen YT. Expression of epidermal growth factor and transforming growth factor α in interfacial membranes retrieved at revision total hip arthroplasty Annals of the Rheumatic Diseases. 59: 822-827. PMID 11005785 DOI: 10.1136/Ard.59.10.822  0.197
2021 Jiang Y, Duan L, Guan F, Yao F, Long L, Wang Y, Zhao X, Li H, Li W, Xu Q, Jiang QT, Wang J, Wei YM, Ma J, Kang H, et al. Exome Sequencing from Bulked Segregant Analysis Identifies a Gene for All Stage Resistance to Stripe Rust on Chromosome 1AL in Chinese Wheat Landrace Xiaohemai. Plant Disease. PMID 34818919 DOI: 10.1094/PDIS-08-21-1618-RE  0.196
2019 Chai LJ, Xu PX, Qian W, Zhang XJ, Ma J, Lu ZM, Wang ST, Shen CH, Shi JS, Xu ZH. Profiling the Clostridia with butyrate-producing potential in the mud of Chinese liquor fermentation cellar. International Journal of Food Microbiology. 297: 41-50. PMID 30878841 DOI: 10.1016/j.ijfoodmicro.2019.02.023  0.195
2014 Wang N, Zhang D, Wang Z, Xun H, Ma J, Wang H, Huang W, Liu Y, Lin X, Li N, Ou X, Zhang C, Wang MB, Liu B. Mutation of the RDR1 gene caused genome-wide changes in gene expression, regional variation in small RNA clusters and localized alteration in DNA methylation in rice. Bmc Plant Biology. 14: 177. PMID 24980094 DOI: 10.1186/1471-2229-14-177  0.195
2022 Xue S, Ma J, Li SS, Fan S, Cai Y, Li J, Fu X, Deng Z, Sun QH, Sun YC, Ma W. Mining of the Novel Virulent ATP-Binding Cassette Importers in by Comparative Genomic Strategy. Microbial Drug Resistance (Larchmont, N.Y.). 28: 1057-1064. PMID 36534487 DOI: 10.1089/mdr.2021.0450  0.194
2021 Wu X, Ning C, Key FM, Andrades Valtueña A, Lankapalli AK, Gao S, Yang X, Zhang F, Liu L, Nie Z, Ma J, Krause J, Herbig A, Cui Y. A 3,000-year-old, basal S. enterica lineage from Bronze Age Xinjiang suggests spread along the Proto-Silk Road. Plos Pathogens. 17: e1009886. PMID 34547027 DOI: 10.1371/journal.ppat.1009886  0.194
2015 Zhao S, Jiang QT, Ma J, Wang JR, Liu YX, Chen GY, Qi PF, Pu ZE, Lu ZX, Zheng YL, Wei YM. Characterization and expression analysis of WOX2 homeodomain transcription factor in Aegilops tauschii. Genetics and Molecular Biology. 38: 79-85. PMID 25983628 DOI: 10.1590/S1415-475738138120140192  0.193
2023 Liu J, Hu Y, Luo X, Xu Z, Castañeda-Ruíz RF, Xia J, Zhang X, Zhang L, Cui R, Ma J. Morphological and Phylogenetic Analyses Reveal Three New Species of (, ) from Yunnan, China. Journal of Fungi (Basel, Switzerland). 9. PMID 37108924 DOI: 10.3390/jof9040470  0.192
2018 Luo W, Qin NN, Mu Y, Tang H, Deng M, Liu Y, Chen G, Jiang QT, Chen GY, Wei Y, Zheng Y, Lan XJ, Ma J. Variation and diversity of the breakpoint sequences on 4AL for 4AL/5AL translocation in Triticum. Genome. PMID 29962237 DOI: 10.1139/gen-2018-0060  0.191
2023 Xiang H, Meng S, Ye Y, Han L, He Y, Cui Y, Tan C, Ma J, Qi M, Li T. A molecular framework for controlled locule development of the floral meristem in tomato. Frontiers in Plant Science. 14: 1249760. PMID 37680356 DOI: 10.3389/fpls.2023.1249760  0.191
2023 Hu Y-F, Liu J-W, Luo X-X, Xu Z-H, Xia J-W, Zhang X-G, Castañeda-Ruíz RF, Ma J. Multi-locus phylogenetic analyses reveal eight novel species of from southern China. Microbiology Spectrum. e0246823. PMID 37905843 DOI: 10.1128/spectrum.02468-23  0.19
2015 Matsunaga W, Ohama N, Tanabe N, Masuta Y, Masuda S, Mitani N, Yamaguchi-Shinozaki K, Ma JF, Kato A, Ito H. A small RNA mediated regulation of a stress-activated retrotransposon and the tissue specific transposition during the reproductive period in Arabidopsis. Frontiers in Plant Science. 6: 48. PMID 25709612 DOI: 10.3389/fpls.2015.00048  0.19
2020 Li J, Jiang Y, Yao F, Long L, Wang Y, Wu Y, Li H, Wang J, Jiang Q, Kang H, Li W, Qi P, Ma J, Pu Z, Dai S, et al. Genome-Wide Association Study Reveals the Genetic Architecture of Stripe Rust Resistance at the Adult Plant Stage in Chinese Endemic Wheat. Frontiers in Plant Science. 11: 625. PMID 32582233 DOI: 10.3389/fpls.2020.00625  0.19
2023 Ma J, Zhang Y, Ding X, Liang Z, Yang C, Deng Z, He H, Guan Z, Zeng C, Lin Y, Luo X. Co-occurrence of Spondyloepiphyseal Dysplasia and X-Linked Hypophosphatemia in a Three-Generation Chinese Family. Calcified Tissue International. PMID 37278761 DOI: 10.1007/s00223-023-01104-0  0.189
2021 Yang X, Tan B, Yang Y, Zhang X, Zhu W, Xu L, Wang Y, Zeng J, Fan X, Lina S, Haiqin Z, Wu D, Ma J, Chen GY, Zhou YH, et al. Genetic diversity of Asian and European common wheat lines assessed by fluorescence in situ hybridization. Genome. PMID 33852810 DOI: 10.1139/gen-2020-0161  0.189
2022 Mei L, Gao X, Yi X, Zhao M, Wang J, Li Z, Li J, Ma J, Pu Z, Peng Y, Jiang Q, Chen G, Wang J, Wei Y, Zheng Y, et al. Polyploidization affects the allelic variation of jasmonate-regulated protein Ta-JA1 belonging to the monocot chimeric jacalin (MCJ) family in wild emmer wheat. Gene. 825: 146399. PMID 35306115 DOI: 10.1016/j.gene.2022.146399  0.188
2022 Zhang JY, Ma J, Xiao YP, Boonmee S, Kang JC, Lu YZ. Morphological and Phylogenetic Analyses Reveal Five New Species in Chaetosphaeriaceae. Journal of Fungi (Basel, Switzerland). 8. PMID 35736126 DOI: 10.3390/jof8060643  0.185
2022 Wang N, Wang S, Qi F, Wang Y, Lin Y, Zhou Y, Meng W, Zhang C, Wang Y, Ma J. Autotetraploidization Gives Rise to Differential Gene Expression in Response to Saline Stress in Rice. Plants (Basel, Switzerland). 11. PMID 36432844 DOI: 10.3390/plants11223114  0.184
2013 Ma J, Jiang QT, Zhang XW, Lan XJ, Pu ZE, Wei YM, Liu C, Lu ZX, Zheng YL. Structure and expression of barley starch phosphorylase genes. Planta. 238: 1081-93. PMID 24002549 DOI: 10.1007/s00425-013-1953-6  0.184
2019 Ye X, Li J, Cheng Y, Yao F, Long L, Wang Y, Wu Y, Li J, Wang J, Jiang Q, Kang H, Li W, Qi P, Lan X, Ma J, et al. Genome-wide association study reveals new loci for yield-related traits in Sichuan wheat germplasm under stripe rust stress. Bmc Genomics. 20: 640. PMID 31395029 DOI: 10.1186/S12864-019-6005-6  0.183
2010 Qi X, Wang X, Wang S, Lin Y, Jiang C, Ma J, Zhao L, Lv X, Shen R, Wang F, Kong X, Su Z, Zhou J. Genomic analysis of an effective lentiviral vaccine-attenuated equine infectious anemia virus vaccine EIAV FDDV13. Virus Genes. 41: 86-98. PMID 20526660 DOI: 10.1007/s11262-010-0491-6  0.183
2023 Hu YF, Liu JW, Xu ZH, Castañeda-Ruíz RF, Zhang K, Ma J. Morphology and Multigene Phylogeny Revealed Three New Species of (, ) from China. Journal of Fungi (Basel, Switzerland). 9. PMID 36836394 DOI: 10.3390/jof9020280  0.182
2010 Wang Y, Geng Y, Ma J, Wang Q, Zhang XG. Sinomyces: a new genus of anamorphic Pleosporaceae. Fungal Biology. 115: 188-95. PMID 21315316 DOI: 10.1016/j.funbio.2010.12.003  0.182
2023 Zhang YZ, Chen QL, Ma J, Lu YZ, Chen HB, Liu NG. Morphological and multi-gene phylogenetic analyses reveal five new hyphomycetes from freshwater habitats. Frontiers in Microbiology. 14: 1253239. PMID 38116531 DOI: 10.3389/fmicb.2023.1253239  0.182
2022 Xie X, Li S, Liu H, Xu Q, Tang H, Mu Y, Deng M, Jiang Q, Chen G, Qi P, Li W, Pu Z, Wei Y, Zheng Y, Lan X, ... Ma J, et al. Identification and validation of a major QTL for kernel length in bread wheat based on two F biparental populations. Bmc Genomics. 23: 386. PMID 35590264 DOI: 10.1186/s12864-022-08608-3  0.181
2010 Ma J, Li D, Zhang Y, Xue D. [Phylogenetic analyses of some important Paris species based on sequences of matK gene]. Zhongguo Zhong Yao Za Zhi = Zhongguo Zhongyao Zazhi = China Journal of Chinese Materia Medica. 35: 18-21. PMID 20349708 DOI: 10.4268/cjcmm20100103  0.181
2019 Li S, Teng Y, Yuan MJ, Ma TT, Ma J, Gao XJ. A seven long-noncoding RNA signature predicts prognosis of lung squamous cell carcinoma. Biomarkers in Medicine. PMID 31729251 DOI: 10.2217/bmm-2019-0282  0.181
2017 Li C, Chen G, Mishina K, Yamaji N, Ma JF, Yukuhiro F, Tagiri A, Liu C, Pourkheirandish M, Anwar N, Ohta M, Zhao P, Lundqvist U, Li X, Komatsuda T. A GDSL-motif esterase/acyltransferase/lipase is responsible for leaf water retention in barley. Plant Direct. 1: e00025. PMID 31245672 DOI: 10.1002/pld3.25  0.18
2021 Zhong X, Lin N, Ding J, Yang Q, Lan J, Tang H, Qi P, Deng M, Ma J, Wang J, Chen G, Lan X, Wei Y, Zheng Y, Jiang Q. Genome-wide transcriptome profiling indicates the putative mechanism underlying enhanced grain size in a wheat mutant. 3 Biotech. 11: 54. PMID 33489673 DOI: 10.1007/s13205-020-02579-6  0.179
2023 Zhao C, Zhou J, Li C, You J, Liu Y, Tang H, Deng M, Xu Q, Zhang Y, Jiang Q, Chen G, Qi P, Jiang Y, Wang J, Li W, ... ... Ma J, et al. A major QTL simultaneously increases the number of spikelets per spike and thousand-kernel weight in a wheat line. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 136: 213. PMID 37740730 DOI: 10.1007/s00122-023-04459-y  0.179
2022 Lu YZ, Ma J, Xiao XJ, Zhang LJ, Xiao YP, Kang JC. Four new species and three new records of helicosporous hyphomycetes from China and their multi-gene phylogenies. Frontiers in Microbiology. 13: 1053849. PMID 36504835 DOI: 10.3389/fmicb.2022.1053849  0.178
2021 Ding J, Karim H, Li Y, Harwood W, Guzmán C, Lin N, Xu Q, Zhang Y, Tang H, Jiang Y, Qi P, Deng M, Ma J, Wang J, Chen G, et al. Re-examination of the Gene Family in Barley ( L.) Indicates a Role in the Regulation of Starch Synthesis. Frontiers in Plant Science. 12: 791584. PMID 34925430 DOI: 10.3389/fpls.2021.791584  0.178
2014 Ma J, Jiang QT, Wei L, Yang Q, Zhang XW, Peng YY, Chen GY, Wei YM, Liu C, Zheng YL. Conserved structure and varied expression reveal key roles of phosphoglucan phosphatase gene starch excess 4 in barley. Planta. 240: 1179-90. PMID 25100144 DOI: 10.1007/s00425-014-2140-0  0.175
2022 Qiu Y, Tong J, Ji Y, Ma J, Zhang H, Wen C, Zhang Y, Xu X. First report of tomato spotted wilt virus infecting water dropwort in China. Plant Disease. PMID 35657712 DOI: 10.1094/PDIS-04-22-0772-PDN  0.175
2023 Ma J, Guo J, Fan Z, Zhao W, Zhou X. CVAM: CNA Profile Inference of the Spatial Transcriptome Based on the VGAE and HMM. Biomolecules. 13. PMID 37238637 DOI: 10.3390/biom13050767  0.174
2020 Huang J, Zhao G, Peng Q, Ma J, Li P, Chang L, Guan Y, Reuben A, Xia X, Yi X, Zhang J, Chen Z. Genomic and immune intratumor heterogeneity in gastric linitis plastica. Journal of Clinical Oncology. 38: e16518-e16518. DOI: 10.1200/jco.2020.38.15_suppl.e16518  0.172
2022 Dong R, Wei X, Zhang K, Song F, Lv Y, Gao M, Wang D, Ma J, Gai Z, Liu Y. Genotypic and phenotypic characteristics of 12 chinese children with glycogen storage diseases. Frontiers in Genetics. 13: 932760. PMID 36105079 DOI: 10.3389/fgene.2022.932760  0.171
2023 Xiao XJ, Ma J, Zhang LJ, Liu NG, Xiao YP, Tian XG, Luo ZL, Lu YZ. Additions to the Genus (Tubeufiaceae, Tubeufiales) from China with an Identification Key for Taxa. Journal of Fungi (Basel, Switzerland). 9. PMID 37504763 DOI: 10.3390/jof9070775  0.171
2020 Talluri B, Amar K, Saul M, Shireen T, Konjufca V, Ma J, Ha T, Chowdhury F. COL2A1 Is a Novel Biomarker of Melanoma Tumor Repopulating Cells. Biomedicines. 8. PMID 32962144 DOI: 10.3390/Biomedicines8090360  0.171
2019 Cheng Y, Li J, Yao F, Long L, Wang Y, Wu Y, Li J, Ye X, Wang J, Jiang Q, Kang H, Li W, Qi P, Liu Y, Deng M, ... Ma J, et al. Dissection of loci conferring resistance to stripe rust in Chinese wheat landraces from the middle and lower reaches of the Yangtze River via genome-wide association study. Plant Science : An International Journal of Experimental Plant Biology. 287: 110204. PMID 31481207 DOI: 10.1016/J.Plantsci.2019.110204  0.17
2019 Ma J, Yang Y, Zhang K, Huang Y, Lyu Y, Gao M, Gai Z, Liu Y. [Analysis of CANT1 gene variant in a girl with Desbuquois dysplasia type I]. Zhonghua Yi Xue Yi Chuan Xue Za Zhi = Zhonghua Yixue Yichuanxue Zazhi = Chinese Journal of Medical Genetics. 36: 1206-1209. PMID 31813149 DOI: 10.3760/cma.j.issn.1003-9406.2019.12.014  0.17
2024 Sun B, Andrades Valtueña A, Kocher A, Gao S, Li C, Fu S, Zhang F, Ma P, Yang X, Qiu Y, Zhang Q, Ma J, Chen S, Xiao X, Damchaabadgar S, et al. Origin and dispersal history of Hepatitis B virus in Eastern Eurasia. Nature Communications. 15: 2951. PMID 38580660 DOI: 10.1038/s41467-024-47358-6  0.17
2016 Yokosho K, Yamaji N, Kashino-Fujii M, Ma JF. Retrotransposon-mediated aluminum tolerance through enhanced expression of the citrate transporter OsFRDL4. Plant Physiology. PMID 27744299 DOI: 10.1104/pp.16.01214  0.17
2021 Zhang R, Zhou T, Ma J. Multiscale and integrative single-cell Hi-C analysis with Higashi. Nature Biotechnology. PMID 34635838 DOI: 10.1038/s41587-021-01034-y  0.169
2023 Tang X, Jeewon R, Lu YZ, Alrefaei AF, Jayawardena RS, Xu RJ, Ma J, Chen XM, Kang JC. Morphophylogenetic evidence reveals four new fungal species within Tetraplosphaeriaceae (Pleosporales, Ascomycota) from tropical and subtropical forest in China. Mycokeys. 100: 171-204. PMID 38098977 DOI: 10.3897/mycokeys.100.113141  0.169
2016 Xing M, Lv H, Ma J, Xu D, Li H, Yang L, Kang J, Wang X, Fang Z. Transcriptome Profiling of Resistance to Fusarium oxysporum f. sp. conglutinans in Cabbage (Brassica oleracea) Roots. Plos One. 11: e0148048. PMID 26849436 DOI: 10.1371/journal.pone.0148048  0.168
2016 Liang M, Niu J, Zhang L, Deng H, Ma J, Zhou W, Duan D, Zhou Y, Xu H, Chen L. Gene expression profiling reveals different molecular patterns in G-protein coupled receptor signaling pathways between early- and late-onset preeclampsia. Placenta. 40: 52-59. PMID 27016783 DOI: 10.1016/j.placenta.2016.02.015  0.168
2021 Kong X, Wang F, Geng S, Guan J, Tao S, Jia M, Sun G, Wang Z, Wang K, Ye X, Ma J, Liu D, Wei Y, Zheng Y, Fu X, et al. The wheat AGL6-like MADS-box gene is a master regulator for floral organ identity and a target for spikelet meristem development manipulation. Plant Biotechnology Journal. PMID 34487615 DOI: 10.1111/pbi.13696  0.167
2012 Jiang QT, Ma J, Zhao S, Zhao QZ, Lan XJ, Dai SF, Lu ZX, Zheng YL, Wei YM. Characterization of HMW-GSs and their gene inaction in tetraploid wheat. Genetica. 140: 325-35. PMID 23054223 DOI: 10.1007/s10709-012-9683-4  0.167
2024 Luo X, Hu Y, Xia J, Zhang K, Ma L, Xu Z, Ma J. Morphological and Phylogenetic Analyses Reveal Three New Species of () from Jiangxi, China. Journal of Fungi (Basel, Switzerland). 10. PMID 38248984 DOI: 10.3390/jof10010075  0.167
2021 Tao Y, Rajaraman A, Cui X, Cui Z, Chen H, Zhao Y, Eaton J, Kim H, Ma J, Schwartz R. Assessing the contribution of tumor mutational phenotypes to cancer progression risk. Plos Computational Biology. 17: e1008777. PMID 33711014 DOI: 10.1371/journal.pcbi.1008777  0.166
2013 Xue L, Cai JY, Ma J, Huang Z, Guo MX, Fu LZ, Shi YB, Li WX. Global expression profiling reveals genetic programs underlying the developmental divergence between mouse and human embryogenesis. Bmc Genomics. 14: 568. PMID 23961710 DOI: 10.1186/1471-2164-14-568  0.166
2019 Gao Y, Ma J, Zheng JC, Chen J, Chen M, Zhou YB, Fu JD, Xu ZS, Ma YZ. The Elongation Factor GmEF4 Is Involved in the Response to Drought and Salt Tolerance in Soybean. International Journal of Molecular Sciences. 20. PMID 31248195 DOI: 10.3390/ijms20123001  0.166
2016 Ma J, Gao S, Jiang QT, Yang Q, Sun M, Wang JR, Qi PF, Liu YX, Li W, Pu ZE, Lan XJ, Wei YM, Liu C, Zheng YL. Structure and expression of phosphoglucan phosphatase genes of Like Sex Four1 and Like Sex Four2 in barley. Genetica. PMID 27154345 DOI: 10.1007/s10709-016-9900-7  0.165
2018 Zhang H, Ma J, Liu J, Mu Y, Tang H, Liu Y, Chen G, Jiang Q, Chen G, Wei Y, Zheng Y, Lan X. Molecular characterization of the TaWTG1 in bread wheat (Triticum aestivum L.). Gene. PMID 30086362 DOI: 10.1016/j.gene.2018.08.010  0.165
2020 Zhou W, Shi H, Wang Z, Zhao Y, Gou X, Li C, Chen G, Liu S, Deng M, Ma J, Zheng Y, Wei Y, Liu Y. Identification of lncRNAs involved in wheat tillering development in two pairs of near-isogenic lines. Functional & Integrative Genomics. PMID 32488459 DOI: 10.1007/s10142-020-00742-z  0.165
2012 Jiang QT, Liu T, Ma J, Wei YM, Lu ZX, Lan XJ, Dai SF, Zheng YL. Characterization of barley Prp1 gene and its expression during seed development and under abiotic stress. Genetica. 139: 1283-92. PMID 22290495 DOI: 10.1007/s10709-012-9630-4  0.164
2023 Ma J, Zhang LJ, Boonmee S, Xiao XJ, Liu NG, Xiao YP, Luo ZL, Lu YZ. Morphological and phylogenetic analyses reveal three new species and one new record of (Tubeufiales, Tubeufiaceae) from southern China. Mycokeys. 99: 87-108. PMID 37614656 DOI: 10.3897/mycokeys.99.107606  0.164
2012 Jiang QT, Ma J, Wei YM, Liu YX, Lan XJ, Dai SF, Lu ZX, Zhao S, Zhao QZ, Zheng YL. Novel variants of HMW glutenin subunits from Aegilops section Sitopsis species in relation to evolution and wheat breeding. Bmc Plant Biology. 12: 73. PMID 22646663 DOI: 10.1186/1471-2229-12-73  0.164
2023 Yao D, Wang J, Peng W, Zhang B, Wen X, Wan X, Wang X, Li X, Ma J, Liu X, Fan Y, Sun G. Transcriptomic profiling of wheat stem during meiosis in response to freezing stress. Frontiers in Plant Science. 13: 1099677. PMID 36714719 DOI: 10.3389/fpls.2022.1099677  0.164
2019 Lin Y, Yi X, Tang S, Chen W, Wu F, Yang X, Jiang X, Shi H, Ma J, Chen G, Chen G, Zheng Y, Wei Y, Liu Y. Dissection of Phenotypic and Genetic Variation of Drought-Related Traits in Diverse Chinese Wheat Landraces. The Plant Genome. 12: 1-14. PMID 33016597 DOI: 10.3835/plantgenome2019.03.0025  0.164
2019 Wang Z, Shi H, Yu S, Zhou W, Li J, Liu S, Deng M, Ma J, Wei Y, Zheng Y, Liu Y. Comprehensive transcriptomics, proteomics, and metabolomics analyses of the mechanisms regulating tiller production in low-tillering wheat. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 31020386 DOI: 10.1007/s00122-019-03345-w  0.164
2021 Yang D, Ma J, Ma XX. CDKN2B-AS1 Promotes Malignancy as a Novel Prognosis-Related Molecular Marker in the Endometrial Cancer Immune Microenvironment. Frontiers in Cell and Developmental Biology. 9: 721676. PMID 34712660 DOI: 10.3389/fcell.2021.721676  0.163
2022 Ma J, Zhang JY, Xiao XJ, Xiao YP, Tang X, Boonmee S, Kang JC, Lu YZ. Multi-Gene Phylogenetic Analyses Revealed Five New Species and Two New Records of from China. Journal of Fungi (Basel, Switzerland). 8. PMID 36422023 DOI: 10.3390/jof8111202  0.163
2022 Xiong Y, Fan XH, Wang Q, Yin ZG, Sheng XW, Chen J, Zhou YB, Chen M, Ma YZ, Ma J, Xu ZS. Genomic Analysis of Soybean PP2A-B Family and Its Effects on Drought and Salt Tolerance. Frontiers in Plant Science. 12: 784038. PMID 35195114 DOI: 10.3389/fpls.2021.784038  0.162
2015 Zhang P, Zhang Y, Gao K, Wang Y, Jin X, Wei Y, Saiyin H, Wang D, Peng J, Ma J, Tang Y, Wumaier R, Yu H, Dong Y, Huang H, et al. ASPP1/2-PP1 complexes are required for chromosome segregation and kinetochore-microtubule attachments. Oncotarget. PMID 26595804 DOI: 10.18632/oncotarget.6355  0.16
2023 Jayawardena RS, Hyde KD, Wang S, Sun YR, Suwannarach N, Sysouphanthong P, Abdel-Wahab MA, Abdel-Aziz FA, Abeywickrama PD, Abreu VP, Armand A, Aptroot A, Bao DF, Begerow D, Bellanger JM, ... ... Ma J, et al. Fungal diversity notes 1512-1610: taxonomic and phylogenetic contributions on genera and species of fungal taxa. Fungal Diversity. 117: 1-272. PMID 36852303 DOI: 10.1007/s13225-022-00513-0  0.159
2023 Leng Z, Liu K, Wang C, Qi F, Zhang C, Li D, Wang N, Ma J. A Comparative Analysis of Major Cell Wall Components and Associated Gene Expression in Autotetraploid and Its Donor Diploid Rice ( L.) under Blast and Salt Stress Conditions. Plants (Basel, Switzerland). 12. PMID 38068612 DOI: 10.3390/plants12233976  0.159
2004 Xiong W, Zeng ZY, Xia JH, Xia K, Shen SR, Li XL, Hu DX, Tan C, Xiang JJ, Zhou J, Deng H, Fan SQ, Li WF, Wang R, Zhou M, ... ... Ma J, et al. A susceptibility locus at chromosome 3p21 linked to familial nasopharyngeal carcinoma. Cancer Research. 64: 1972-4. PMID 15026332 DOI: 10.1158/0008-5472.CAN-03-3253  0.158
2024 Chen XM, Tang X, Ma J, Liu NG, Tibpromma S, Karunarathna SC, Xiao YP, Lu YZ. Identification of two new species and a new host record of (Distoseptisporaceae, Distoseptisporales, Sordariomycetes) from terrestrial and freshwater habitats in Southern China. Mycokeys. 102: 83-105. PMID 38370857 DOI: 10.3897/mycokeys.102.115452  0.157
2011 Wang X, Wang S, Lin Y, Jiang C, Ma J, Zhao L, Lv X, Wang F, Shen R, Zhou J. Unique evolution characteristics of the envelope protein of EIAV(LN₄₀), a virulent strain of equine infectious anemia virus. Virus Genes. 42: 220-8. PMID 21369830 DOI: 10.1007/s11262-010-0563-7  0.157
2012 Tsutsui T, Yamaji N, Huang CF, Motoyama R, Nagamura Y, Ma JF. Comparative genome-wide transcriptional analysis of Al-responsive genes reveals novel Al tolerance mechanisms in rice. Plos One. 7: e48197. PMID 23110212 DOI: 10.1371/journal.pone.0048197  0.156
2012 Sang Y, Ma J, Hou Z, Zhang Y. Phylogenetic analysis of the VP2 gene of Aleutian mink disease parvoviruses isolated from 2009 to 2011 in China. Virus Genes. 45: 31-7. PMID 22415542 DOI: 10.1007/s11262-012-0734-9  0.156
2024 Han TT, Huang JH, Li LX, Liao X, Meng XQ, Wen ZN, Sun Q, Ma J, Huang TH. Integration of hepatitis B virus into patients' sperm genome and its clinical risks. Andrology. PMID 38506240 DOI: 10.1111/andr.13618  0.156
2020 Ma J, Zhang JK, Yang D, Ma XX. Identification of novel prognosis-related genes in the endometrial cancer immune microenvironment. Aging. 12. PMID 33159014 DOI: 10.18632/aging.104083  0.156
2016 Wang CS, Jiang QT, Ma J, Wang XY, Wang JR, Chen GY, Qi PF, Peng YY, Lan XJ, Zheng YL, Wei YM. Characterization and expression analyses of the H⁺-pyrophosphatase gene in rye. Journal of Genetics. 95: 565-72. PMID 27659326  0.156
2022 Shu H, You Y, Wang H, Wang J, Li L, Ma J, Lin X. Transcriptomic-Guided Phosphonate Utilization Analysis Unveils Evidence of Clathrin-Mediated Endocytosis and Phospholipid Synthesis in the Model Diatom, . Msystems. e0056322. PMID 36317887 DOI: 10.1128/msystems.00563-22  0.155
2023 Bi M, Wang Z, Cheng K, Cui Y, He Y, Ma J, Qi M. Construction of transcription factor mutagenesis population in tomato using a pooled CRISPR/Cas9 plasmid library. Plant Physiology and Biochemistry : Ppb. 205: 108094. PMID 37995578 DOI: 10.1016/j.plaphy.2023.108094  0.154
2021 Wang D, Ma J, Botuyan MV, Cui G, Yan Y, Ding D, Zhou Y, Krueger EW, Pei J, Wu X, Wang L, Pei H, McNiven MA, Ye D, Mer G, et al. ATM-phosphorylated SPOP contributes to 53BP1 exclusion from chromatin during DNA replication. Science Advances. 7. PMID 34144977 DOI: 10.1126/sciadv.abd9208  0.154
2020 Tu Y, Liu H, Liu J, Tang H, Mu Y, Deng M, Jiang Q, Liu Y, Chen G, Wang J, Qi P, Pu Z, Chen G, Peng Y, Jiang Y, ... ... Ma J, et al. QTL mapping and validation of bread wheat flag leaf morphology across multiple environments in different genetic backgrounds. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 33026461 DOI: 10.1007/s00122-020-03695-w  0.154
2022 Ye N, Han W, Toseland A, Wang Y, Fan X, Xu D, van Oosterhout C, Grigoriev IV, Tagliabue A, Zhang J, Zhang Y, Ma J, Qiu H, Li Y, Zhang X, et al. The role of zinc in the adaptive evolution of polar phytoplankton. Nature Ecology & Evolution. PMID 35654896 DOI: 10.1038/s41559-022-01750-x  0.154
2012 Huang CF, Yamaji N, Ono K, Ma JF. A leucine-rich repeat receptor-like kinase gene is involved in the specification of outer cell layers in rice roots. The Plant Journal : For Cell and Molecular Biology. 69: 565-76. PMID 22014207 DOI: 10.1111/j.1365-313X.2011.04824.x  0.154
2018 Zhao J, Tang X, Wight CP, Tinker NA, Jiang Y, Yan H, Ma J, Lan XJ, Wei YM, Ren C, Chen G, Peng Y. Genetic Mapping and a New PCR-based Marker Linked to a Dwarfing Gene in Oat (Avena sativa L.). Genome. PMID 29733232 DOI: 10.1139/gen-2017-0006  0.153
2019 Ma J, Yin B, Shi JY, Lin YS, Duan SJ, Shi B, Jia ZL. Exon sequencing reveals that missense mutation of gene may increase the risk of non-syndromic cleft lip/palate. International Journal of Clinical and Experimental Pathology. 12: 2691-2698. PMID 31934099  0.152
2013 Ma J, Jiang QT, Zhao QZ, Zhao S, Lan XJ, Dai SF, Lu ZX, Liu C, Wei YM, Zheng YL. Characterization and expression analysis of waxy alleles in barley accessions. Genetica. 141: 227-38. PMID 23690246 DOI: 10.1007/s10709-013-9721-x  0.152
2018 Du WW, Yang W, Li X, Awan FM, Yang Z, Fang L, Lyu J, Li F, Peng C, Krylov SN, Xie Y, Zhang Y, He C, Wu N, Zhang C, ... ... Ma J, et al. A circular RNA circ-DNMT1 enhances breast cancer progression by activating autophagy. Oncogene. PMID 29973691 DOI: 10.1038/S41388-018-0369-Y  0.152
2023 Gao M, Yu F, Dong R, Zhang K, Lv Y, Ma J, Wang D, Zhang H, Gai Z, Liu Y. Diagnostic application of exome sequencing in Chinese children with suspected inherited kidney diseases. Frontiers in Genetics. 13: 933636. PMID 36685964 DOI: 10.3389/fgene.2022.933636  0.152
2021 Ma J, Yang D, Ma XX. Immune infiltration-related N6-methyladenosine RNA methylation regulators influence the malignancy and prognosis of endometrial cancer. Aging. 13: 16287-16315. PMID 34230220 DOI: 10.18632/aging.203157  0.151
2023 Liu J, Hu Y, Luo X, Castañeda-Ruíz RF, Xia J, Xu Z, Cui R, Shi X, Zhang L, Ma J. Molecular Phylogeny and Morphology Reveal Four Novel Species of and (, ) from China: A Checklist for Reported Worldwide. Journal of Fungi (Basel, Switzerland). 9. PMID 36675928 DOI: 10.3390/jof9010107  0.151
2020 Ma J, Zhang H, Zhang K, Lyu Y, Gao M, Wang D, Gai Z, Liu Y. [Genetic analysis of a case with Pitt-Hopkins syndrome due to variant of TCF4 gene]. Zhonghua Yi Xue Yi Chuan Xue Za Zhi = Zhonghua Yixue Yichuanxue Zazhi = Chinese Journal of Medical Genetics. 37: 1253-1256. PMID 33179233 DOI: 10.3760/cma.j.cn511374-20190725-00372  0.15
2022 Chen H, Wei J, Tian R, Zeng Z, Tang H, Liu Y, Xu Q, Deng M, Jiang Q, Chen G, Liu Y, Li W, Qi P, Jiang Y, Jiang Y, ... ... Ma J, et al. A major quantitative trait locus for wheat total root length associated with precipitation distribution. Frontiers in Plant Science. 13: 995183. PMID 36092437 DOI: 10.3389/fpls.2022.995183  0.15
2017 Ishikawa R, Iwata M, Taniko K, Monden G, Miyazaki N, Orn C, Tsujimura Y, Yoshida S, Ma JF, Ishii T. Detection of quantitative trait loci controlling grain zinc concentration using Australian wild rice, Oryza meridionalis, a potential genetic resource for biofortification of rice. Plos One. 12: e0187224. PMID 29077764 DOI: 10.1371/journal.pone.0187224  0.15
2021 Ogasawara M, Miyazaki N, Monden G, Taniko K, Lim S, Iwata M, Ishii T, Ma JF, Ishikawa R. Role of qGZn9a in controlling grain zinc concentration in rice, Oryza sativa L. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 34110432 DOI: 10.1007/s00122-021-03873-4  0.149
2019 Ma J, Ding P, Liu J, Li T, Zou Y, Habib A, Mu Y, Tang H, Jiang Q, Liu Y, Chen G, Wang J, Deng M, Qi P, Li W, et al. Identification and validation of a major and stably expressed QTL for spikelet number per spike in bread wheat. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 31435704 DOI: 10.1007/s00122-019-03415-z  0.149
2011 Li W, Li X, Wang W, Li X, Tan Y, Yi M, Yang J, McCarthy JB, Xiong W, Wu M, Ma J, Su B, Zhang Z, Liao Q, Xiang B, et al. NOR1 is an HSF1- and NRF1-regulated putative tumor suppressor inactivated by promoter hypermethylation in nasopharyngeal carcinoma. Carcinogenesis. 32: 1305-14. PMID 21803736 DOI: 10.1093/carcin/bgr174  0.149
2022 Chen H, Zhao C, Yang Y, Zeng Z, Li W, Liu Y, Tang H, Xu Q, Deng M, Jiang Q, Chen G, Peng Y, Jiang Y, Jiang Y, Wei Y, ... ... Ma J, et al. Identification and validation of a locus for wheat maximum root length independent of parental reproductive environment. Frontiers in Plant Science. 13: 999414. PMID 36172559 DOI: 10.3389/fpls.2022.999414  0.148
2020 Ma J, Liu Y, Zhang K, Lyu Y, Gao M, Wang D, Gai Z, Liu Y. [Analysis of a case with Mowat-Wilson syndrome caused by ZEB2 gene variant]. Zhonghua Yi Xue Yi Chuan Xue Za Zhi = Zhonghua Yixue Yichuanxue Zazhi = Chinese Journal of Medical Genetics. 37: 539-542. PMID 32335881 DOI: 10.3760/cma.j.issn.1003-9406.2020.05.011  0.148
2023 Zhou J, Li W, Yang Y, Xie X, Liu J, Liu Y, Tang H, Deng M, Xu Q, Jiang Q, Chen G, Qi P, Jiang Y, Chen G, He Y, ... ... Ma J, et al. A promising QTL QSns.sau-MC-3D.1 likely superior to WAPO1 for the number of spikelets per spike of wheat shows no adverse effects on yield-related traits. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 136: 181. PMID 37550493 DOI: 10.1007/s00122-023-04429-4  0.148
2019 Li D, Zhang J, Liu H, Tan B, Zhu W, Xu L, Wang Y, Zeng J, Fan X, Sha L, Zhang H, Ma J, Chen G, Zhou Y, Kang H. Characterization of a wheat-tetraploid Thinopyrum elongatum 1E(1D) substitution line K17-841-1 by cytological and phenotypic analysis and developed molecular markers. Bmc Genomics. 20: 963. PMID 31823771 DOI: 10.1186/s12864-019-6359-9  0.146
2015 Zheng Z, Ma J, Stiller J, Zhao Q, Feng Q, Choulet F, Feuillet C, Zheng YL, Wei Y, Han B, Yan G, Manners JM, Liu C. Fine mapping of a large-effect QTL conferring Fusarium crown rot resistance on the long arm of chromosome 3B in hexaploid wheat. Bmc Genomics. 16: 850. PMID 26493707 DOI: 10.1186/s12864-015-2105-0  0.146
2018 Kashino-Fujii M, Yokosho K, Yamaji N, Yamane M, Saisho D, Sato K, Ma JF. Retrotransposon insertion and DNA methylation regulate aluminum tolerance in European barley accessions. Plant Physiology. PMID 30093528 DOI: 10.1104/pp.18.00651  0.145
2014 Ma J, Stiller J, Zhao Q, Feng Q, Cavanagh C, Wang P, Gardiner D, Choulet F, Feuillet C, Zheng YL, Wei Y, Yan G, Han B, Manners JM, Liu C. Transcriptome and allele specificity associated with a 3BL locus for Fusarium crown rot resistance in bread wheat. Plos One. 9: e113309. PMID 25405461 DOI: 10.1371/journal.pone.0113309  0.145
2017 Zhang LL, Chen H, Luo M, Zhang XW, Deng M, Ma J, Qi PF, Wang JR, Chen GY, Liu YX, Pu ZE, Li W, Lan XJ, Wei YM, Zheng YL, et al. Transposon insertion resulted in the silencing of Wx-B1n in Chinese wheat landraces. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 28314934 DOI: 10.1007/s00122-017-2878-4  0.145
2022 Wang N, Fan X, Lin Y, Li Z, Wang Y, Zhou Y, Meng W, Peng Z, Zhang C, Ma J. Alkaline Stress Induces Different Physiological, Hormonal and Gene Expression Responses in Diploid and Autotetraploid Rice. International Journal of Molecular Sciences. 23. PMID 35628377 DOI: 10.3390/ijms23105561  0.145
2015 Wang YP, Wei ZY, Zhong XF, Lin CJ, Cai YH, Ma J, Zhang YY, Liu YZ, Xing SC. Stable Expression of Basic Fibroblast Growth Factor in Chloroplasts of Tobacco. International Journal of Molecular Sciences. 17. PMID 26703590 DOI: 10.3390/ijms17010019  0.145
2018 Zhou YJ, Yang Q, Zhong XJ, Deng M, Ma J, Qi PF, Wang JR, Chen GY, Liu Y, Lu ZX, Li W, Lan XJ, Wei YM, Zheng Y, Jiang QT. Alternative splicing results in a lack of starch synthase IIa-D in Chinese wheat landrace. Genome. PMID 29401409 DOI: 10.1139/gen-2017-0246  0.145
2023 Wang Y, Meng W, Ye Y, Yu X, Chen H, Liu Y, Xu M, Wang N, Qi F, Lan Y, Xu Y, Ma J, Zhang C. Transcriptome-Wide Analysis of Core Transcription Factors Associated with Defense Responses in Autotetraploid versus Diploid Rice under Saline Stress and Recovery. International Journal of Molecular Sciences. 24. PMID 37958969 DOI: 10.3390/ijms242115982  0.144
2023 Yi X, Ye Y, Wang J, Li Z, Li J, Chen Y, Chen G, Ma J, Pu Z, Peng Y, Qi P, Liu Y, Jiang Q, Wang J, Wei Y, et al. Identification and validation of two major QTLs for spikelet number per spike in wheat ( L.). Frontiers in Plant Science. 14: 1144486. PMID 37235013 DOI: 10.3389/fpls.2023.1144486  0.144
2020 Peng Q, Wang L, Qin Z, Wang J, Zheng X, Wei L, Zhang X, Zhang X, Liu C, Li Z, Wu Y, Li G, Yan Q, Ma J. Phase separation of Epstein-Barr Virus EBNA2 and Its Coactivator EBNALP controls gene expression. Journal of Virology. PMID 31941785 DOI: 10.1128/JVI.01771-19  0.144
2011 Li X, Shen S, Wu M, Li X, Xiong W, Lu J, Zhou M, Ma J, Xiang J, Zeng Z, Xiang B, Zhou Y, Xiao L, Zhou H, Fan S, et al. [Transcriptomic regulation and molecular mechanism of polygenic tumor at different stages]. Zhong Nan Da Xue Xue Bao. Yi Xue Ban = Journal of Central South University. Medical Sciences. 36: 585-91. PMID 21873780 DOI: 10.3969/j.issn.1672-7347.2011.07.001  0.144
2018 Che J, Tsutsui T, Yokosho K, Yamaji N, Ma JF. Functional characterization of an aluminum (Al)-inducible transcription factor, ART2, revealed a different pathway for Al tolerance in rice. The New Phytologist. PMID 29888411 DOI: 10.1111/nph.15252  0.143
2024 Chi J, Bi W, Lou K, Ma J, Wu J, Cui Y. Research advances in Peyronie's disease: a comprehensive review on genomics, pathways, phenotypic manifestation, and therapeutic targets. Sexual Medicine Reviews. PMID 38456235 DOI: 10.1093/sxmrev/qeae006  0.142
2012 Chen S, Ma J, Wu F, Xiong LJ, Ma H, Xu W, Lv R, Li X, Villen J, Gygi SP, Liu XS, Shi Y. The histone H3 Lys 27 demethylase JMJD3 regulates gene expression by impacting transcriptional elongation. Genes & Development. 26: 1364-75. PMID 22713873 DOI: 10.1101/Gad.186056.111  0.142
2022 Hou S, Wu F, Wang Z, Yan N, Chen H, Li H, Yang P, Zhang Y, Li C, Lin Y, Ma J, Huang L, Liu Y. Mapping stripe rust resistance QTL in N2496, a synthetic hexaploid wheat derivative. Plant Disease. PMID 35802018 DOI: 10.1094/PDIS-07-22-1518-RE  0.142
2023 Ma J, Xiao XJ, Liu NG, Boonmee S, Xiao YP, Lu YZ. Morphological and Multi-Gene Phylogenetic Analyses Reveal gen. nov. and Two New Species in Tubeufiaceae from China. Journal of Fungi (Basel, Switzerland). 9. PMID 37504731 DOI: 10.3390/jof9070742  0.141
2021 Zhou J, Li C, You J, Tang H, Mu Y, Jiang Q, Liu Y, Chen G, Wang J, Qi P, Ma J, Gao Y, Habib A, Wei Y, Zheng Y, ... ... Ma J, et al. Genetic identification and characterization of chromosomal regions for kernel length and width increase from tetraploid wheat. Bmc Genomics. 22: 706. PMID 34592925 DOI: 10.1186/s12864-021-08024-z  0.14
2016 Yang Q, Deng M, Zhang LL, Zhang XW, Wang LN, Chen H, Ma J, Qi PF, Jiang QT, Lan XJ, Wei YM, Zheng YL. A super twin T-DNA vector that allows independent gene expression during Agrobacterium-mediated transformation. Plasmid. PMID 27615011 DOI: 10.1016/j.plasmid.2016.09.002  0.14
2023 Hu Y, Luo X, Xu Z, Zhang L, Wang Y, Cui R, Kuang W, Xia Y, Ma J. First Report of Colletotrichum fructicola Causing Anthracnose on Punica granatum in China. Plant Disease. PMID 37330628 DOI: 10.1094/PDIS-03-23-0540-PDN  0.139
2020 Liu J, Tang H, Qu X, Liu H, Li C, Tu Y, Li S, Habib A, Mu Y, Dai S, Deng M, Jiang Q, Liu Y, Chen G, Wang J, ... ... Ma J, et al. A novel, major, and validated QTL for the effective tiller number located on chromosome arm 1BL in bread wheat. Plant Molecular Biology. PMID 32734417 DOI: 10.1007/s11103-020-01035-6  0.139
2021 Yang J, Peng G, Shu F, Dong D, Zheng X, Zhu C, Li X, Ma J, Pan C, Yang F, Dong W. Characteristics of steroidogenesis-related factors in the musk gland of Chinese forest musk deer (Moschus berezovskii). The Journal of Steroid Biochemistry and Molecular Biology. 105916. PMID 34010686 DOI: 10.1016/j.jsbmb.2021.105916  0.138
2016 Ma J, Zhang Z, Yao Q, Su C, Yin X, Wang X. Regulation of Rev expression by the EIAV tat-rev mRNA Kozak sequence and its potential influence on viral replication. The Journal of General Virology. PMID 27411804 DOI: 10.1099/jgv.0.000548  0.138
2020 Kim YC, Seok S, Zhang Y, Ma J, Kong B, Guo G, Kemper B, Kemper JK. Intestinal FGF15/19 physiologically repress hepatic lipogenesis in the late fed-state by activating SHP and DNMT3A. Nature Communications. 11: 5969. PMID 33235221 DOI: 10.1038/s41467-020-19803-9  0.138
2020 Liu P, Zhang X, Li Z, Wei L, Peng Q, Liu C, Wu Y, Yan Q, Ma J. A significant role of transcription factors E2F in inflammation and tumorigenesis of nasopharyngeal carcinoma. Biochemical and Biophysical Research Communications. PMID 32044038 DOI: 10.1016/j.bbrc.2020.01.158  0.137
2018 Che J, Yamaji N, Yokosho K, Shen RF, Ma JF. Two genes encoding a bacterial-type ATP-binding cassette transporter are implicated in aluminum tolerance in buckwheat. Plant & Cell Physiology. PMID 30124933 DOI: 10.1093/pcp/pcy171  0.136
2023 Wang N, Wang Y, Wang C, Leng Z, Qi F, Wang S, Zhou Y, Meng W, Liu K, Zhang C, Ma J. Evaluating the Differential Response of Transcription Factors in Diploid versus Autotetraploid Rice Leaves Subjected to Diverse Saline-Alkali Stresses. Genes. 14. PMID 37372331 DOI: 10.3390/genes14061151  0.135
2021 Qu X, Liu J, Xie X, Xu Q, Tang H, Mu Y, Pu Z, Li Y, Ma J, Gao Y, Jiang Q, Liu Y, Chen G, Wang J, Qi P, ... ... Ma J, et al. Genetic Mapping and Validation of Loci for Kernel-Related Traits in Wheat ( L.). Frontiers in Plant Science. 12: 667493. PMID 34163507 DOI: 10.3389/fpls.2021.667493  0.135
2014 Ma J, Jiang QT, Wei L, Wang JR, Chen GY, Liu YX, Li W, Wei YM, Liu C, Zheng YL. Characterization of shrunken endosperm mutants in barley. Gene. 539: 15-20. PMID 24508469 DOI: 10.1016/j.gene.2014.02.004  0.135
2017 Fei HR, Zhou YS, Li RT, Yang MF, Ma J, Wang FZ. HBXIP, a binding protein of HBx, regulates maintenance of the G2/M phase checkpoint induced by DNA Damage and enhances sensitivity to doxorubicin-induced cytotoxicity. Cell Cycle (Georgetown, Tex.). 0. PMID 28103177 DOI: 10.1080/15384101.2017.1281482  0.135
2017 Feng Z, Ma J, Hua X. Epigenetic regulation by the menin pathway. Endocrine-Related Cancer. PMID 28811300 DOI: 10.1530/ERC-17-0298  0.134
2020 Zou Y, Tang H, Li T, Sun M, Qu X, Zhou J, Yang C, Mu Y, Jiang Q, Liu Y, Chen G, Chen G, Zheng Y, Wei Y, Lan X, ... Ma J, et al. Identification and characterization of mRNAs and lncRNAs of a barley shrunken endosperm mutant using RNA-seq. Genetica. PMID 32078720 DOI: 10.1007/s10709-020-00087-2  0.134
2017 Su NJ, Ma J, Feng DF, Zhou S, Li ZT, Zhou WP, Deng H, Liang JY, Yang XH, Zhang YM, Liu FH, Zhang L. The peripheral blood transcriptome identifies dysregulation of inflammatory response genes in polycystic ovary syndrome. Gynecological Endocrinology : the Official Journal of the International Society of Gynecological Endocrinology. 1-5. PMID 29262729 DOI: 10.1080/09513590.2017.1418851  0.133
2023 Wang S, Wang T, Xuan Q, Qu X, Xu Q, Jiang Q, Pu Z, Li Y, Jiang Y, Chen G, Deng M, Liu Y, Tang H, Chen G, He Y, ... ... Ma J, et al. Major and stably expressed QTL for traits related to the mature wheat embryo independent of kernel size. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 136: 90. PMID 37000252 DOI: 10.1007/s00122-023-04346-6  0.133
2019 Ma J, Tu Y, Zhu J, Luo W, Liu H, Li C, Li S, Liu J, Ding P, Habib A, Mu Y, Tang H, Liu Y, Jiang Q, Chen G, et al. Flag leaf size and posture of bread wheat: genetic dissection, QTL validation and their relationships with yield-related traits. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 31628527 DOI: 10.1007/s00122-019-03458-2  0.132
2021 You J, Liu H, Wang S, Luo W, Gou L, Tang H, Mu Y, Deng M, Jiang Q, Chen G, Qi P, Peng Y, Tang L, Habib A, Wei Y, ... ... Ma J, et al. Spike Density Quantitative Trait Loci Detection and Analysis in Tetraploid and Hexaploid Wheat Recombinant Inbred Line Populations. Frontiers in Plant Science. 12: 796397. PMID 34975986 DOI: 10.3389/fpls.2021.796397  0.132
2021 Li C, Liu H, Wang J, Pan Q, Wang Y, Wu K, Jia P, Mu Y, Tang H, Xu Q, Jiang Q, Liu Y, Qi P, Zhang X, Huang L, ... ... Ma J, et al. Characterization and fine mapping of a lesion mimic mutant (Lm5) with enhanced stripe rust and powdery mildew resistance in bread wheat (Triticum aestivum L.). Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 34661696 DOI: 10.1007/s00122-021-03973-1  0.132
2018 Xu BJ, Chen Q, Zheng T, Jiang YF, Qiao YY, Guo ZR, Cao YL, Wang Y, Zhang YZ, Zong LJ, Zhu J, Liu CH, Jiang QT, Lan XJ, Ma J, et al. An Overexpressed Q Allele Leads to Increased Spike Density and Improved Processing Quality in Common Wheat ( Triticum aestivum ). G3 (Bethesda, Md.). PMID 29358231 DOI: 10.1534/g3.117.300562  0.132
2012 Chen M, Huang J, Yang X, Liu B, Zhang W, Huang L, Deng F, Ma J, Bai Y, Lu R, Huang B, Gao Q, Zhuo Y, Ge J. Serum starvation induced cell cycle synchronization facilitates human somatic cells reprogramming. Plos One. 7: e28203. PMID 22529890 DOI: 10.1371/journal.pone.0028203  0.132
2021 Ma J, Shi Q, Cui G, Sheng H, Botuyan MV, Zhou Y, Yan Y, He Y, Wang L, Wang Y, Mer G, Ye D, Wang C, Huang H. SPOP mutation induces replication over-firing by impairing Geminin ubiquitination and triggers replication catastrophe upon ATR inhibition. Nature Communications. 12: 5779. PMID 34599168 DOI: 10.1038/s41467-021-26049-6  0.131
2024 Liu H, Liang X, Tang G, Wang X, Wang Z, Tong L, Mao Q, Ma J, Wu J. Identifying molecular subtypes and tumor microenvironment infiltration signatures in kidney renal clear cell carcinoma based on stemness-associated disulfidptosis genes by integrating machine learning, single-cell analyses and experimental validation. Heliyon. 10: e26094. PMID 38390172 DOI: 10.1016/j.heliyon.2024.e26094  0.131
2019 Pommerrenig B, Diehn TA, Bernhardt N, Bienert MD, Mitani-Ueno N, Fuge J, Bieber A, Spitzer C, Bräutigam A, Ma JF, Chaumont F, Bienert GP. Functional evolution of Nodulin26-like Intrinsic Proteins: From bacterial arsenic detoxification to plant nutrient transport. The New Phytologist. PMID 31550387 DOI: 10.1111/Nph.16217  0.131
2023 Hu Y, Liu J, Luo X, Cui R, Zhang L, Zhou L, Xu Z, Ma J. First Report of Corynespora cassiicola Causing Leaf Spot on Jasminum nudiflorum in China. Plant Disease. PMID 36890132 DOI: 10.1094/PDIS-01-23-0159-PDN  0.131
2021 Wang W, Ding M, Gardner JD, Wang Y, Miao B, Guo W, Wu X, Ruan Q, Yu J, Hu X, Wang B, Wu X, Tang Z, Niyazi A, Zhang J, ... ... Ma J, et al. Ancient Xinjiang mitogenomes reveal intense admixture with high genetic diversity. Science Advances. 7. PMID 33789892 DOI: 10.1126/sciadv.abd6690  0.131
2023 Zhao X, Zhang K, Zhang H, Bi M, He Y, Cui Y, Tan C, Ma J, Qi M. Tomato encode an LRR receptor-like serine/threonine-protein kinase ERECTA regulating stem elongation through modulating gibberellin metabolism. Frontiers in Plant Science. 14: 1283489. PMID 38078095 DOI: 10.3389/fpls.2023.1283489  0.131
2020 Li C, Tang H, Luo W, Zhang X, Mu Y, Deng M, Liu Y, Jiang Q, Chen G, Wang J, Qi P, Pu Z, Jiang Y, Wei Y, Zheng Y, ... ... Ma J, et al. A novel, validated, and plant height-independent QTL for spike extension length is associated with yield-related traits in wheat. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 32870326 DOI: 10.1007/s00122-020-03675-0  0.131
2019 Wang D, Gao M, Zhang K, Jin R, Lv Y, Liu Y, Ma J, Wan Y, Gai Z, Liu Y. Molecular Genetics Analysis of 70 Chinese Families With Muscular Dystrophy Using Multiplex Ligation-Dependent Probe Amplification and Next-Generation Sequencing. Frontiers in Pharmacology. 10: 814. PMID 31404137 DOI: 10.3389/fphar.2019.00814  0.13
2021 Gao Y, Fu Y, Wang J, Zheng X, Zhou J, Ma J. EBV as a high infection risk factor promotes RASSF10 methylation and induces cell proliferation in EBV-associated gastric cancer. Biochemical and Biophysical Research Communications. 547: 1-8. PMID 33588233 DOI: 10.1016/j.bbrc.2021.02.014  0.13
2018 Fan C, Wang J, Tang Y, Wang Y, Xiong F, Zhang S, Li X, Xiang B, Wu X, Guo C, Ma J, Zhou M, Li X, Xiong W, Li Y, et al. Long non-coding RNA LOC284454 promotes migration and invasion of nasopharyngeal carcinoma via modulating the Rho/Rac signaling pathway. Carcinogenesis. PMID 30380023 DOI: 10.1093/carcin/bgy143  0.129
2023 Jin H, Zhang H, Zhao X, Long L, Guan F, Wang Y, Huang L, Zhang X, Wang Y, Li H, Li W, Pu Z, Zhang Y, Xu Q, Jiang Q, ... ... Ma J, et al. Identification of a suppressor for the wheat stripe rust resistance gene Yr81 in Chinese wheat landrace Dahongpao. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 136: 67. PMID 36952028 DOI: 10.1007/s00122-023-04347-5  0.129
2022 Ma J, Li C, Gao P, Qiu Y, Zong M, Zhang H, Wang J. Melon shoot organization 1, encoding an AGRONAUTE7 protein, plays a crucial role in plant development. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 35802144 DOI: 10.1007/s00122-022-04156-2  0.129
2022 Zhang C, Meng W, Wang Y, Zhou Y, Wang S, Qi F, Wang N, Ma J. Comparative Analysis of Physiological, Hormonal and Transcriptomic Responses Reveal Mechanisms of Saline-Alkali Tolerance in Autotetraploid Rice ( L.). International Journal of Molecular Sciences. 23. PMID 36555786 DOI: 10.3390/ijms232416146  0.128
2021 Ma J, Du WW, Zeng K, Wu N, Fang L, Lyu J, Yee AJ, Yang BB. An antisense circular RNA circSCRIB enhances cancer progression by suppressing parental gene splicing and translation. Molecular Therapy : the Journal of the American Society of Gene Therapy. PMID 34365033 DOI: 10.1016/j.ymthe.2021.08.002  0.128
2020 Yao F, Long L, Wang Y, Duan L, Zhao X, Jiang Y, Li H, Pu Z, Li W, Jiang Q, Wang J, Wei Y, Ma J, Kang H, Dai S, et al. Population structure and genetic basis of the stripe rust resistance of 140 Chinese wheat landraces revealed by a genome-wide association study. Plant Science : An International Journal of Experimental Plant Biology. 301: 110688. PMID 33218646 DOI: 10.1016/j.plantsci.2020.110688  0.127
2021 Mo Z, Zhu J, Wei J, Zhou J, Xu Q, Tang H, Mu Y, Deng M, Jiang Q, Liu Y, Chen G, Wang J, Qi P, Li W, Wei Y, ... ... Ma J, et al. The 55K SNP-Based Exploration of QTLs for Spikelet Number Per Spike in a Tetraploid Wheat ( L.) Population: Chinese Landrace "Ailanmai" × Wild Emmer. Frontiers in Plant Science. 12: 732837. PMID 34531890 DOI: 10.3389/fpls.2021.732837  0.127
2009 Ma J, Jiang C, Lin Y, Wang X, Zhao L, Xiang W, Shao Y, Shen R, Kong X, Zhou J. In vivo evolution of the gp90 gene and consistently low plasma viral load during transient immune suppression demonstrate the safety of an attenuated equine infectious anemia virus (EIAV) vaccine. Archives of Virology. 154: 867-73. PMID 19363668 DOI: 10.1007/s00705-009-0378-9  0.127
2023 Wang X, Wanasinghe DN, Zhang J, Ma J, Zhou P, Zhang L, Lu Y, Zhang Z. Insights from the Endophytic Fungi in (Sordariomycetes): sp. nov. from and Its Secondary Metabolites. Microorganisms. 11. PMID 37317242 DOI: 10.3390/microorganisms11051268  0.127
2017 Wu F, Yang X, Wang Z, Deng M, Ma J, Chen G, Wei Y, Liu Y. Identification of major quantitative trait loci for root diameter in synthetic hexaploid wheat under phosphorus-deficient conditions. Journal of Applied Genetics. PMID 28887804 DOI: 10.1007/s13353-017-0406-5  0.127
2015 Du C, Liu HF, Lin YZ, Wang XF, Ma J, Li YJ, Wang X, Zhou JH. Proteomic alteration of equine monocyte-derived macrophages infected with equine infectious anemia virus. Proteomics. 15: 1843-58. PMID 25684102 DOI: 10.1002/pmic.201400279  0.126
2016 Zhou H, Liu S, Liu Y, Liu Y, You J, Deng M, Ma J, Chen G, Wei Y, Liu C, Zheng Y. Mapping and validation of major quantitative trait loci for kernel length in wild barley (Hordeum vulgare ssp. spontaneum). Bmc Genetics. 17: 130. PMID 27624070 DOI: 10.1186/s12863-016-0438-6  0.126
2021 Cai L, Gong X, Zheng X, Kuang W, Yang L, Zhang L, Sun X, Ma J, Cui R. First Report of Lotus Seedpod Withering Caused by Fusarium proliferatum on Nelumbo nucifera Plants in China. Plant Disease. PMID 34319764 DOI: 10.1094/PDIS-06-21-1236-PDN  0.126
2022 Li H, Fang T, Tan QG, Ma J. Development of a versatile smartphone-based environmental analyzer (vSEA) and its application in on-site nutrient detection. The Science of the Total Environment. 838: 156197. PMID 35623512 DOI: 10.1016/j.scitotenv.2022.156197  0.125
2022 Ma J, Li C, Tian J, Qiu Y, Geng L, Wang J. Identification and fine mapping of gummy stem blight resistance gene Gsb-7(t) in Melon. Phytopathology. PMID 35906768 DOI: 10.1094/PHYTO-05-22-0169-R  0.125
2015 Zhang X, Ai F, Li X, She X, Li N, Tang A, Qin Z, Ye Q, Tian L, Li G, Shen S, Ma J. Inflammation-induced S100A8 activates Id3 and promotes colorectal tumorigenesis. International Journal of Cancer. Journal International Du Cancer. PMID 26135667 DOI: 10.1002/ijc.29671  0.125
2022 Wang J, Liu H, Zhao C, Tang H, Mu Y, Xu Q, Deng M, Jiang Q, Chen G, Qi P, Wang J, Jiang Y, Chen S, Wei Y, Zheng Y, ... ... Ma J, et al. Mapping and validation of major and stable QTL for flag leaf size from tetraploid wheat. The Plant Genome. e20252. PMID 35929379 DOI: 10.1002/tpg2.20252  0.124
2018 Chen B, Ma J, Li C, Wang Y. Long noncoding RNA KCNQ1OT1 promotes proliferation and epithelial‑mesenchymal transition by regulation of SMAD4 expression in lens epithelial cells. Molecular Medicine Reports. PMID 29749509 DOI: 10.3892/mmr.2018.8987  0.123
2021 Peng Q, Zhou Y, Oyang L, Wu N, Tang Y, Su M, Luo X, Wang Y, Sheng X, Ma J, Liao Q. Impacts and Mechanisms of Alternative mRNA Splicing in Cancer Metabolism, Immune Response and Therapeutics. Molecular Therapy : the Journal of the American Society of Gene Therapy. PMID 34793975 DOI: 10.1016/j.ymthe.2021.11.010  0.123
2021 Yu E, Yamaji N, Mochida K, Galis I, Asaka K, Ma JF. Lysine Ketoglutarate Reductase Trans-Splicing Related 1 Is Involved In A Temperature-Dependent Root Growth in Rice. Journal of Experimental Botany. PMID 34037776 DOI: 10.1093/jxb/erab240  0.123
2020 Liu C, Wu Y, Ma J. Interaction of non-coding RNAs and Hippo signaling: Implications for tumorigenesis. Cancer Letters. PMID 32822816 DOI: 10.1016/j.canlet.2020.08.012  0.122
2006 Zhou M, Liu H, Xu X, Zhou H, Li X, Peng C, Shen S, Xiong W, Ma J, Zeng Z, Fang S, Nie X, Yang Y, Zhou J, Xiang J, et al. Identification of nuclear localization signal that governs nuclear import of BRD7 and its essential roles in inhibiting cell cycle progression. Journal of Cellular Biochemistry. 98: 920-30. PMID 16475162 DOI: 10.1002/jcb.20788  0.122
2012 Tang A, Li N, Li X, Yang H, Wang W, Zhang L, Li G, Xiong W, Ma J, Shen S. Dynamic activation of the key pathways: linking colitis to colorectal cancer in a mouse model. Carcinogenesis. 33: 1375-83. PMID 22610167 DOI: 10.1093/carcin/bgs183  0.122
2022 Gong X, Kuang W, Zheng X, Zhang L, Sun X, Ma J, Cui R. First report of Alternaria alternata causing leaf spot on Nelumbo nucifera plants in China. Plant Disease. PMID 35253483 DOI: 10.1094/PDIS-07-21-1471-PDN  0.122
2022 Li Y, Karim H, Wang B, Guzmán C, Harwood W, Xu Q, Zhang Y, Tang H, Jiang Y, Qi P, Deng M, Ma J, Lan J, Wang J, Chen G, et al. Regulation of Amylose Content by Single Mutations at an Active Site in the Wx-B1 Gene in a Tetraploid Wheat Mutant. International Journal of Molecular Sciences. 23. PMID 35955567 DOI: 10.3390/ijms23158432  0.122
2019 Ma J, Zhang Q, Zhang K, Lyu Y, Gao M, Gai Z, Liu Y. [Clinical and genetic analysis of a neonate with Cornelia de Lange syndrome 5 caused by HDAC8 gene mutation]. Zhonghua Yi Xue Yi Chuan Xue Za Zhi = Zhonghua Yixue Yichuanxue Zazhi = Chinese Journal of Medical Genetics. 36: 720-723. PMID 31302920 DOI: 10.3760/cma.j.issn.1003-9406.2019.07.016  0.121
2016 Wang H, Zhao R, Guo C, Jiang S, Yang J, Xu Y, Liu Y, Fan L, Xiong W, Ma J, Peng S, Zeng Z, Zhou Y, Li X, Li Z, et al. Knockout of BRD7 results in impaired spermatogenesis and male infertility. Scientific Reports. 6: 21776. PMID 26878912 DOI: 10.1038/Srep21776  0.121
2019 Ma J, Ding P, Liu J, Li T, Zou Y, Habib A, Mu Y, Tang H, Jiang Q, Liu Y, Chen G, Wang J, Deng M, Qi P, Li W, et al. Correction to: Identification and validation of a major and stably expressed QTL for spikelet number per spike in bread wheat. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 31664478 DOI: 10.1007/s00122-019-03467-1  0.121
2021 Wang Y, Yu C, Cheng Y, Yao F, Long L, Wu Y, Li J, Li H, Wang J, Jiang Q, Li W, Pu Z, Qi P, Ma J, Deng M, et al. Genome-wide association mapping reveals potential novel loci controlling stripe rust resistance in a Chinese wheat landrace diversity panel from the southern autumn-sown spring wheat zone. Bmc Genomics. 22: 34. PMID 33413106 DOI: 10.1186/s12864-020-07331-1  0.121
2013 Zhang D, Wang W, Xiang B, Li N, Huang S, Zhou W, Sun Y, Wang X, Ma J, Li G, Li X, Shen S. Reduced succinate dehydrogenase B expression is associated with growth and de-differentiation of colorectal cancer cells. Tumour Biology : the Journal of the International Society For Oncodevelopmental Biology and Medicine. 34: 2337-47. PMID 23645213 DOI: 10.1007/s13277-013-0781-4  0.121
2017 Yang Q, Du WW, Wu N, Yang W, Awan FM, Fang L, Ma J, Li X, Zeng Y, Yang Z, Dong J, Khorshidi A, Yang BB. A circular RNA promotes tumorigenesis by inducing c-myc nuclear translocation. Cell Death and Differentiation. PMID 28622299 DOI: 10.1038/Cdd.2017.86  0.12
2015 Ma J, Lei C, Xu X, Hao K, Wang J, Cheng Z, Ma X, Ma J, Zhou K, Zhang X, Guo X, Wu F, Lin Q, Wang C, Zhai H, et al. Pi64, Encoding a Novel CC-NBS-LRR Protein, Confers Resistance to Leaf and Neck Blast in Rice. Molecular Plant-Microbe Interactions : Mpmi. 28: 558-68. PMID 25650828 DOI: 10.1094/MPMI-11-14-0367-R  0.12
2022 Cui Y, Wu J, Zhou Z, Ma J, Dong L. Two novel lncRNAs AF111167.2 and AL162377.1 targeting miR-21-5p mediated down expression of SYDE2 correlates with poor prognosis and tumor immune infiltration of ccRCC. Heliyon. 8: e11079. PMID 36311369 DOI: 10.1016/j.heliyon.2022.e11079  0.12
2024 Lou K, Chi J, Wu J, Ma J, Liu S, Cui Y. Research progress on the microbiota in bladder cancer tumors. Frontiers in Cellular and Infection Microbiology. 14: 1374944. PMID 38650736 DOI: 10.3389/fcimb.2024.1374944  0.12
2024 Xiao P, Chen J, Wu P, Zhang W, Sun Z, Ma J, Li H. Development of an SI-traceable N-terminal pro-B-type natriuretic peptide certified reference material using structure-based impurity-corrected isotope dilution mass spectrometry approaches. Analytical and Bioanalytical Chemistry. PMID 38642097 DOI: 10.1007/s00216-024-05295-9  0.12
2023 Zhang X, Zheng R, Li Z, Ma J. Liquid-liquid Phase Separation in Viral Function. Journal of Molecular Biology. 167955. PMID 36642156 DOI: 10.1016/j.jmb.2023.167955  0.12
2018 Wang XF, Liu Q, Wang YH, Wang S, Chen J, Lin YZ, Ma J, Zhou JH, Wang X. Characterization of EIAV LTR quasispecies in vitro and in vivo. Journal of Virology. PMID 29386282 DOI: 10.1128/JVI.02150-17  0.12
2022 Ma J, Zhang H, Lyu Y, Gao M, Wang D, Gai Z, Liu Y. [Genetic analysis of a child with combined oxidative phosphorylation deficiency 14 due to variant of FARS2 gene]. Zhonghua Yi Xue Yi Chuan Xue Za Zhi = Zhonghua Yixue Yichuanxue Zazhi = Chinese Journal of Medical Genetics. 39: 1393-1397. PMID 36453966 DOI: 10.3760/cma.j.cn511374-20210731-00644  0.12
2016 Chen ZC, Yamaji N, Kashino-Fujii M, Ma JF. A cation-chloride cotransporter gene is required for cell elongation and osmoregulation in rice. Plant Physiology. PMID 26983995 DOI: 10.1104/pp.16.00017  0.12
2012 Yin J, Vogel U, Wang C, Liang D, Ma Y, Wang H, Yue L, Liu D, Ma J, Sun X. Hapmap-based evaluation of ERCC2, PPP1R13L, and ERCC1 and lung cancer risk in a Chinese population. Environmental and Molecular Mutagenesis. 53: 239-45. PMID 22351191 DOI: 10.1002/em.21681  0.119
2012 Song B, Wang PW, Fu YP, Fan XH, Xia HF, Gao W, Hong Y, Wang H, Zhang Z, Ma J. [Cloning and functional analysis of SCTF-1 encoding a C2H2-type Zinc finger protein from soybean]. Yi Chuan = Hereditas / Zhongguo Yi Chuan Xue Hui Bian Ji. 34: 749-56. PMID 22698747 DOI: 10.3724/sp.j.1005.2012.00749  0.119
2019 Luo M, Ding J, Li Y, Tang H, Qi P, Ma J, Wang J, Chen G, Pu Z, Li W, Li Z, Harwood W, Lan X, Deng M, Lu Z, et al. A single-base change at a splice site in Wx-A1 caused incorrect RNA splicing and gene inactivation in a wheat EMS mutant line. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 30993362 DOI: 10.1007/s00122-019-03340-1  0.119
2021 Chen Q, Lei L, Liu C, Zhang Y, Xu Q, Zhu J, Guo Z, Wang Y, Li Q, Li Y, Kong L, Jiang Y, Lan X, Wang J, Jiang Q, ... ... Ma J, et al. Major Facilitator Superfamily Transporter Gene Is Essential for to Deal with Salicylic Acid Stress and for Its Pathogenicity towards Wheat. International Journal of Molecular Sciences. 22. PMID 34445203 DOI: 10.3390/ijms22168497  0.119
2022 Zhou L, Yang Y, Ma J, Liu M, Liu R, Ma X, Qiao C. Comprehensive analysis of alternative splicing signatures in pancreatic head cancer. Iet Systems Biology. PMID 36479597 DOI: 10.1049/syb2.12056  0.119
2015 Sun Y, Huang Y, Yin A, Pan Y, Wang Y, Wang C, Du Y, Wang M, Lan F, Hu Z, Wang G, Jiang M, Ma J, Zhang X, Ma H, ... Ma J, et al. Genome-wide association study identifies a new susceptibility locus for cleft lip with or without a cleft palate. Nature Communications. 6: 6414. PMID 25775280 DOI: 10.1038/ncomms7414  0.119
2016 Ma J, Deng M, Lv SY, Yang Q, Jiang QT, Qi PF, Li W, Chen GY, Lan XJ, Wei YM. Identification of QTLs associated with tissue culture response of mature wheat embryos. Springerplus. 5: 1552. PMID 27652125 DOI: 10.1186/s40064-016-3241-y  0.119
2017 Zeng D, Ma J, Li R, Yang J, Yin X. The inhibitory effect of 5,7-DMF on pancreatic sphere-forming cell function mediated by FoxM1 gene expression. Journal of Cellular Biochemistry. PMID 28802012 DOI: 10.1002/jcb.26346  0.119
2008 Liu H, Zhou M, Luo X, Zhang L, Niu Z, Peng C, Ma J, Peng S, Zhou H, Xiang B, Li X, Li S, He J, Li X, Li G. Transcriptional regulation of BRD7 expression by Sp1 and c-Myc. Bmc Molecular Biology. 9: 111. PMID 19111069 DOI: 10.1186/1471-2199-9-111  0.119
2012 Zheng Y, Chen P, Guo X, Ma J, Li G. [New function of lactoferrin: protection against cancer development and metastasis]. Zhong Nan Da Xue Xue Bao. Yi Xue Ban = Journal of Central South University. Medical Sciences. 37: 1284-9. PMID 23281388 DOI: 10.3969/j.issn.1672-7347.2012.12.019  0.118
2020 Lyu Y, Zhao D, Zhang K, Gao M, Ma J, Wang D, Gai Z, Liu Y. [Diagnosis of Bainbridge-Ropers syndrome due to de novo ASXL3 variant by high throughput sequencing]. Zhonghua Yi Xue Yi Chuan Xue Za Zhi = Zhonghua Yixue Yichuanxue Zazhi = Chinese Journal of Medical Genetics. 37: 452-454. PMID 32219835 DOI: 10.3760/cma.j.issn.1003-9406.2020.04.022  0.118
2013 Wang S, Sun H, Ma J, Zang C, Wang C, Wang J, Tang Q, Meyer CA, Zhang Y, Liu XS. Target analysis by integration of transcriptome and ChIP-seq data with BETA. Nature Protocols. 8: 2502-15. PMID 24263090 DOI: 10.1038/Nprot.2013.150  0.118
2022 Chen G, Zhou X, Khasannov M, Spengler RN, Ma J, Annaev T, Kambarov N, Maksudov F, Wang J, Askarov A, Li X. Morphotype broadening of the grapevine (Vitis vinifera L.) from Oxus civilization 4000 BP, Central Asia. Scientific Reports. 12: 16331. PMID 36175486 DOI: 10.1038/s41598-022-19644-0  0.118
2020 Yang CC, Ma J, Li C, Sun M, Zou YY, Li T, Mu Y, Tang HP, Lan XJ. The development and validation of new DNA markers linked to the thousand-grain weight QTL in bread wheat (Triticum aestivum L.) Czech Journal of Genetics and Plant Breeding. 56: 52-61. DOI: 10.17221/35/2019-cjgpb  0.118
2021 Zhou Y, Jin X, Ma J, Ding D, Huang Z, Sheng H, Yan Y, Pan Y, Wei T, Wang L, Wu H, Huang H. HDAC5 loss impairs RB repression of pro-oncogenic genes and confers CDK4/6 inhibitor resistance in cancer. Cancer Research. PMID 33419772 DOI: 10.1158/0008-5472.CAN-20-2828  0.117
2011 Yordem BK, Conte SS, Ma JF, Yokosho K, Vasques KA, Gopalsamy SN, Walker EL. Brachypodium distachyon as a new model system for understanding iron homeostasis in grasses: phylogenetic and expression analysis of Yellow Stripe-Like (YSL) transporters. Annals of Botany. 108: 821-33. PMID 21831857 DOI: 10.1093/Aob/Mcr200  0.117
2012 Fujii M, Yokosho K, Yamaji N, Saisho D, Yamane M, Takahashi H, Sato K, Nakazono M, Ma JF. Acquisition of aluminium tolerance by modification of a single gene in barley. Nature Communications. 3: 713. PMID 22395604 DOI: 10.1038/ncomms1726  0.117
2019 Ma J, Qin N, Cai B, Chen G, Ding P, Zhang H, Yang C, Huang L, Mu Y, Tang H, Liu Y, Wang J, Qi P, Jiang Q, Zheng Y, et al. Identification and validation of a novel major QTL for all-stage stripe rust resistance on 1BL in the winter wheat line 20828. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 30680420 DOI: 10.1007/s00122-019-03283-7  0.117
2022 Kuang W, Ye L, Gao W, Ma J, Zhang L, Xiong G, Liu B, Cui R. First Report of Colletotrichum siamense Causing Anthracnose on Eriobotrya japonica in China. Plant Disease. PMID 36510422 DOI: 10.1094/PDIS-06-22-1341-PDN  0.117
2020 Chen G, Zhou X, Wang J, Ma J, Khasannov M, Khasanov N, Spengler RN, Berdimurodov A, Li X. Kushan Period rice in the Amu Darya Basin: Evidence for prehistoric exchange along the southern Himalaya Science China Earth Sciences. 63: 841-851. DOI: 10.1007/S11430-019-9585-2  0.116
2019 Yang XB, Meng WL, Zhao MJ, Zhang AX, Liu W, Xu ZS, Wang YP, Ma J. Proteomics Analysis to Identify Proteins and Pathways Associated with the Novel Lesion Mimic Mutant E40 in Rice Using iTRAQ-Based Strategy. International Journal of Molecular Sciences. 20. PMID 30875808 DOI: 10.3390/ijms20061294  0.116
2019 Li S, Ma J, Si Y, Cheng S, Hu M, Zhi X, Li B, Yu H, Jiang WG. Differential expression and functions of Ehm2 transcript variants in lung adenocarcinoma. International Journal of Oncology. PMID 30816447 DOI: 10.3892/ijo.2019.4732  0.116
2021 Zhang X, Zhang J, Wang Y, Xu D, Fan X, Zhang Y, Ma J, Ye N. The oxylipin messenger 1-octen-3-ol induced rapid responses in kelp Macrocystis pyrifera. Physiologia Plantarum. PMID 33547806 DOI: 10.1111/ppl.13358  0.116
2020 Kuang CH, Zhao XF, Yang K, Zhang ZP, Ding L, Pu ZE, Ma J, Jiang QT, Chen GY, Wang JR, Wei YM, Zheng YL, Li W. Mapping and characterization of major QTL for spike traits in common wheat. Physiology and Molecular Biology of Plants : An International Journal of Functional Plant Biology. 26: 1295-1307. PMID 32549690 DOI: 10.1007/s12298-020-00823-0  0.116
2022 Du WW, Li X, Ma J, Fang L, Wu N, Li F, Dhaliwal P, Yang W, Yee AJ, Yang BB. Promotion of tumor progression by exosome transmission of circular RNA circSKA3. Molecular Therapy. Nucleic Acids. 27: 276-292. PMID 35024241 DOI: 10.1016/j.omtn.2021.11.027  0.116
2023 Xu X, Yu TF, Ma J, Chen J, Zhou YB, Chen M, Chen ZY, Ma YZ, Xu ZS, Zhang ZA. Transformation and Detection of Soybean Hairy Roots. Bio-Protocol. 13: e4691. PMID 37323638 DOI: 10.21769/BioProtoc.4691  0.115
2019 Long L, Yao F, Yu C, Ye X, Cheng Y, Wang Y, Wu Y, Li J, Wang J, Jiang Q, Li W, Ma J, Liu Y, Deng M, Wei Y, et al. Genome-Wide Association Study for Adult-Plant Resistance to Stripe Rust in Chinese Wheat Landraces ( L.) From the Yellow and Huai River Valleys. Frontiers in Plant Science. 10: 596. PMID 31156668 DOI: 10.3389/fpls.2019.00596  0.115
2011 Ma J, Wang Y, O'Neill NR, Zhang XG. A revision of the genus Lomaantha, with the description of a new species. Mycologia. 103: 407-10. PMID 20943523 DOI: 10.3852/10-176  0.115
2019 Li Y, Zhang H, Yan B, Ma Y, Yang X, Guan J, Lv Y, Gao M, Ma J, Gai Z, Liu Y. An induced pluripotent stem cell line (SDQLCHi006-A) derived from a patient with maple syrup urine disease type Ib carrying compound heterozygous mutations of p.R168C and p.T322I in BCKDHB gene. Stem Cell Research. 40: 101579. PMID 31610500 DOI: 10.1016/j.scr.2019.101579  0.115
2018 Yang X, Liu Y, Wu F, Jiang X, Lin Y, Wang Z, Zhang Z, Ma J, Chen G, Wei Y, Zheng Y. Quantitative trait loci (QTL) analysis of root traits under phosphorus deficiency at the seedling stage in wheat. Genome. PMID 29373804 DOI: 10.1139/gen-2017-0159  0.114
2012 Zeng Y, Wang W, Ma J, Wang X, Guo M, Li W. Knockdown of ZNF268, which is transcriptionally downregulated by GATA-1, promotes proliferation of K562 cells. Plos One. 7: e29518. PMID 22235304 DOI: 10.1371/journal.pone.0029518  0.114
2017 Liu S, Wang Z, Chen D, Zhang B, Tian R, Wu J, Zhang Y, Xu K, Yang L, Cheng C, Ma J, Lv L, Zheng Y, Hu X, Zhang Y, et al. Annotation and cluster analysis of spatiotemporal- and sex-related lncRNA expression in Rhesus macaque brain. Genome Research. PMID 28687705 DOI: 10.1101/Gr.217463.116  0.114
2017 Ai J, Sun JH, Ma J, Yao K. Effects of lentivirus-mediated endostatin on endothelial progenitor cells. Oncotarget. 8: 94431-94439. PMID 29212239 DOI: 10.18632/oncotarget.21770  0.114
2022 Chen L, Shan C, Kuang W, Zheng X, Lin Y, Ma J, Cui R. First report of spotting disease caused by Fusarium proliferatum infection of Alisma orientale in China. Plant Disease. PMID 36058636 DOI: 10.1094/PDIS-07-22-1568-PDN  0.114
2022 Gao M, Hou L, Zhang K, Lyu Y, Ma J, Wang D, Gai Z, Liu Y. [Analysis of TNPO3 gene variant and clinical phenotype in a neonate with limb-girdle muscular dystrophies form 1F]. Zhonghua Yi Xue Yi Chuan Xue Za Zhi = Zhonghua Yixue Yichuanxue Zazhi = Chinese Journal of Medical Genetics. 39: 979-982. PMID 36082569 DOI: 10.3760/cma.j.cn511374-20210804-00649  0.114
2021 Yao F, Guan F, Duan L, Long L, Tang H, Jiang Y, Li H, Jiang Q, Wang J, Qi P, Kang H, Li W, Ma J, Pu Z, Deng M, et al. Genome-Wide Association Analysis of Stable Stripe Rust Resistance Loci in a Chinese Wheat Landrace Panel Using the 660K SNP Array. Frontiers in Plant Science. 12: 783830. PMID 35003168 DOI: 10.3389/fpls.2021.783830  0.114
2017 Ma J, Luo W, Zhang H, Zhou XH, Qin NN, Wei YM, Liu Y, Jiang QT, Chen GY, Zheng YL, Lan XJ. Identification of quantitative trait loci for seedling root traits from Tibetan semi-wild wheat (Triticum aestivum ssp. tibetanum). Genome. PMID 28841403 DOI: 10.1139/gen-2017-0097  0.113
2012 Delhaize E, Ma JF, Ryan PR. Transcriptional regulation of aluminium tolerance genes. Trends in Plant Science. 17: 341-8. PMID 22459757 DOI: 10.1016/j.tplants.2012.02.008  0.113
2011 Li X, Hou L, Ma J, Liu Y, Zheng L, Zou X. Cloning and characterization of β-catenin gene in early embryonic developmental stage of Artemia sinica. Molecular Biology Reports. 39: 701-7. PMID 21584700 DOI: 10.1007/s11033-011-0788-0  0.113
2019 Wu N, Yuan Z, Du KY, Fang L, Lyu J, Zhang C, He A, Eshaghi E, Zeng K, Ma J, Du WW, Yang BB. Translation of yes-associated protein (YAP) was antagonized by its circular RNA via suppressing the assembly of the translation initiation machinery. Cell Death and Differentiation. PMID 31092884 DOI: 10.1038/S41418-019-0337-2  0.112
2015 Zhao P, Ma J, Guo Y, Tian L, Guo G, Zhang K, Xing M. Isolation and characterization of a herpesvirus from feral pigeons in China. Veterinary Journal (London, England : 1997). PMID 26542366 DOI: 10.1016/j.tvjl.2015.09.017  0.112
2019 Li T, Ma J, Zou Y, Chen G, Ding PY, Zhang H, Yang CC, Mu Y, Tang H, Liu Y, Jiang Q, Chen GY, Qi PF, Wei YM, Zheng Y, et al. Quantitative trait loci for seeding root traits and the relationships between root and agronomic traits in common wheat. Genome. PMID 31580743 DOI: 10.1139/gen-2019-0116  0.112
2022 Tian J, Zhang G, Zhang F, Ma J, Wen C, Li H. Genome-Wide Identification of Powdery Mildew Responsive Long Non-Coding RNAs in . Frontiers in Genetics. 13: 933022. PMID 35846119 DOI: 10.3389/fgene.2022.933022  0.112
2013 Yang Y, Liao Q, Wei F, Li X, Zhang W, Fan S, Shi L, Li X, Gong Z, Ma J, Zhou M, Xiang J, Peng S, Xiang B, Deng H, et al. LPLUNC1 inhibits nasopharyngeal carcinoma cell growth via down-regulation of the MAP kinase and cyclin D1/E2F pathways. Plos One. 8: e62869. PMID 23650533 DOI: 10.1371/journal.pone.0062869  0.112
2020 Lin Y, Jiang X, Tao Y, Yang X, Wang Z, Wu F, Liu S, Li C, Deng M, Ma J, Chen G, Wei Y, Zheng Y, Liu Y. Identification and validation of stable quantitative trait loci for grain filling rate in common wheat (Triticum aestivum L.). Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 32430666 DOI: 10.1007/s00122-020-03605-0  0.112
2020 Ma J, Liu X, Zou X, Yue M, Shang P, Kang L, Jemei S, Lu C, Ding Y, Zerhouni N, Cheng Y. Degradation prognosis for proton exchange membrane fuel cell based on hybrid transfer learning and intercell differences. Isa Transactions. PMID 32591254 DOI: 10.1016/J.Isatra.2020.06.005  0.112
2023 Feng T, Jiang R, Yin L, Xu C, Ma J, Yin W, Jin J, Lu T, Liu X, Lyu Y, Yang Y, Ying L, Hu Q, Su D, Ling S. PDZ-binding kinase aggravates pancreatic neuroendocrine neoplasm progression by activating the AKT/mTOR pathway. Molecular Carcinogenesis. PMID 36807309 DOI: 10.1002/mc.23519  0.112
2014 Jiang QT, Zhang XW, Ma J, Wei L, Zhao S, Zhao QZ, Qi PF, Lu ZX, Zheng YL, Wei YM. Characterization of high-molecular-weight glutenin subunits from Eremopyrum bonaepartis and identification of a novel variant with unusual high molecular weight and altered cysteine residues. Planta. 239: 865-75. PMID 24395202 DOI: 10.1007/s00425-013-2021-y  0.112
2023 Hu Y, Luo X, Xu Z, Wang Y, Cui R, Zhang L, Wang N, Ma J. First Report of Anthracnose Caused by Colletotrichum siamense on Hydrangea macrophylla in China. Plant Disease. PMID 37196151 DOI: 10.1094/PDIS-02-23-0328-PDN  0.112
2023 Zeng Z, Song S, Ma J, Hu D, Xu Y, Hou Y, He C, Tang X, Lan T, Zeng J, Gao X, Chen G. QTL Mapping of Agronomic and Physiological Traits at the Seedling and Maturity Stages under Different Nitrogen Treatments in Barley. International Journal of Molecular Sciences. 24. PMID 37240081 DOI: 10.3390/ijms24108736  0.111
2019 Wu Y, Doepner M, Hojnacki T, Feng Z, Katona BW, He X, Ma J, Cao Y, Busino L, Zhou F, Hua X. Disruption of the menin-MLL interaction triggers menin protein degradation via ubiquitin-proteasome pathway. American Journal of Cancer Research. 9: 1682-1694. PMID 31497350  0.111
2020 Wang S, Liu S, Wang J, Yokosho K, Zhou B, Yu YC, Liu Z, Frommer WB, Ma JF, Chen LQ, Guan Y, Shou H, Tian Z. Simultaneous changes in seed size, oil content and protein content driven by selection of homologues during soybean domestication. National Science Review. 7: 1776-1786. PMID 34691511 DOI: 10.1093/nsr/nwaa110  0.11
2017 Ou C, Sun Z, Li S, Li G, Li X, Ma J. Dual roles of yes-associated protein (YAP) in colorectal cancer. Oncotarget. 8: 75727-75741. PMID 29088905 DOI: 10.18632/oncotarget.20155  0.11
2019 Qi PF, Zhang YZ, Liu CH, Chen Q, Guo ZR, Wang Y, Xu BJ, Jiang YF, Zheng T, Gong X, Luo CH, Wu W, Kong L, Deng M, Ma J, et al. Functional Analysis of Clarifies the Contribution of Salicylic Acid to Wheat () Resistance against Fusarium Head Blight. Toxins. 11. PMID 30678154 DOI: 10.3390/toxins11020059  0.11
2015 Wang YP, Wei ZY, Zhang YY, Lin CJ, Zhong XF, Wang YL, Ma JY, Ma J, Xing SC. Chloroplast-expressed MSI-99 in tobacco improves disease resistance and displays inhibitory effect against rice blast fungus. International Journal of Molecular Sciences. 16: 4628-41. PMID 25739079 DOI: 10.3390/ijms16034628  0.11
2014 Yin X, Lu G, Guo W, Qi T, Ma J, Zhu C, Zhao S, Pan J, Xiang W. Identification of equine influenza virus infection in Asian wild horses (Equus przewalskii). Archives of Virology. 159: 1159-62. PMID 24212887 DOI: 10.1007/s00705-013-1908-z  0.109
2024 Lin Y, Zhang Y, Ma J, Liu S, Liu Y, Yang C, Zeng C, Luo X. Two Chinese Patients of Auriculocondylar Syndrome 2: A Novel Splicing Variant and 5-Year Follow-up. The Cleft Palate-Craniofacial Journal : Official Publication of the American Cleft Palate-Craniofacial Association. 10556656241234575. PMID 38414442 DOI: 10.1177/10556656241234575  0.109
2017 Li S, Xia Q, Wang F, Yu X, Ma J, Kou H, Lin X, Gao X, Liu B. Laser Irradiation-Induced DNA Methylation Changes Are Heritable and Accompanied with Transpositional Activation of mPing in Rice. Frontiers in Plant Science. 8: 363. PMID 28377781 DOI: 10.3389/fpls.2017.00363  0.109
2017 Ma J, Grant CE, Plagens RN, Barrett LN, Kim Guisbert KS, Guisbert E. Cellular Proteomes Drive Tissue-Specific Regulation of the Heat Shock Response. G3 (Bethesda, Md.). PMID 28143946 DOI: 10.1534/G3.116.038232  0.109
2020 Wu Y, Wang Y, Yao F, Long L, Li J, Li H, Pu Z, Li W, Jiang QT, Wang J, Wei YM, Ma J, Kang H, Qi P, Dai S, et al. Molecular Mapping of a Novel QTL Conferring Adult Plant Resistance to Stripe Rust in Chinese Wheat Landrace 'Guangtoumai'. Plant Disease. PMID 32990521 DOI: 10.1094/PDIS-07-20-1544-RE  0.109
2016 Yokosho K, Yamaji N, Mitani-Ueno N, Shen RF, Ma JF. An aluminum-inducible IREG gene is required for internal detoxification of aluminum in buckwheat. Plant & Cell Physiology. PMID 27053033 DOI: 10.1093/pcp/pcw065  0.109
2021 Sun K, Wang D, Yang BB, Ma J. The Emerging Functions of Circular RNAs in Bladder Cancer. Cancers. 13. PMID 34572845 DOI: 10.3390/cancers13184618  0.109
2019 Zhang YZ, Chen Q, Liu CH, Lei L, Li Y, Zhao K, Wei MQ, Guo ZR, Wang Y, Xu BJ, Jiang YF, Kong L, Liu YL, Lan XJ, Jiang QT, ... Ma J, et al. Encodes a Cell Wall Mannoprotein Conferring Sensitivity to Salicylic Acid and Virulence to Wheat. Toxins. 11. PMID 31671876 DOI: 10.3390/toxins11110628  0.108
2018 Coskun D, Deshmukh R, Sonah H, Menzies JG, Reynolds O, Ma JF, Kronzucker HJ, Bélanger RR. The controversies of silicon's role in plant biology. The New Phytologist. PMID 30007071 DOI: 10.1111/Nph.15343  0.108
2017 Liu X, Lister DL, Zhao Z, Petrie CA, Zeng X, Jones PJ, Staff RA, Pokharia AK, Bates J, Singh RN, Weber SA, Motuzaite Matuzeviciute G, Dong G, Li H, Lü H, ... ... Ma J, et al. Journey to the east: Diverse routes and variable flowering times for wheat and barley en route to prehistoric China. Plos One. 12: e0187405. PMID 29095896 DOI: 10.1371/journal.pone.0187405  0.108
2020 Lin Y, Chen G, Hu H, Yang X, Zhang Z, Jiang X, Wu F, Shi H, Wang Q, Zhou K, Li C, Ma J, Zheng Y, Wei Y, Liu Y. Phenotypic and genetic variation in phosphorus-deficiency-tolerance traits in Chinese wheat landraces. Bmc Plant Biology. 20: 330. PMID 32660424 DOI: 10.1186/s12870-020-02492-3  0.108
2018 Deng F, Yamaji N, Ma JF, Lee SK, Jeon JS, Martinoia E, Lee Y, Song WY. Engineering rice with lower grain arsenic. Plant Biotechnology Journal. PMID 29479780 DOI: 10.1111/Pbi.12905  0.108
2021 Ren Y, Lyu Y, Ma J, Wang D, Zhang G, Liu Y, Gai Z. [Identification of a GNB1 gene variant in a child with autosomal dominant mental retardation 42]. Zhonghua Yi Xue Yi Chuan Xue Za Zhi = Zhonghua Yixue Yichuanxue Zazhi = Chinese Journal of Medical Genetics. 38: 565-568. PMID 34096027 DOI: 10.3760/cma.j.cn511374-20200121-00044  0.108
2018 Sultan KT, Liu WA, Li ZL, Shen Z, Li Z, Zhang XJ, Dean O, Ma J, Shi SH. Progressive divisions of multipotent neural progenitors generate late-born chandelier cells in the neocortex. Nature Communications. 9: 4595. PMID 30389944 DOI: 10.1038/S41467-018-07055-7  0.108
2012 Chen ZC, Yamaji N, Motoyama R, Nagamura Y, Ma JF. Up-regulation of a magnesium transporter gene OsMGT1 is required for conferring aluminum tolerance in rice. Plant Physiology. 159: 1624-33. PMID 22732245 DOI: 10.1104/pp.112.199778  0.108
2015 Ma X, Ma J, Zhai H, Xin P, Chu J, Qiao Y, Han L. CHR729 Is a CHD3 Protein That Controls Seedling Development in Rice. Plos One. 10: e0138934. PMID 26398683 DOI: 10.1371/journal.pone.0138934  0.108
2021 He Y, Wang L, Wei T, Xiao YT, Sheng H, Su H, Hollern DP, Zhang X, Ma J, Wen S, Xie H, Yan Y, Pan Y, Hou X, Tang X, et al. FOXA1 overexpression suppresses interferon signaling and immune response in cancer. The Journal of Clinical Investigation. PMID 34101624 DOI: 10.1172/JCI147025  0.108
2019 Ma J, Wang Y, Ma X, Meng L, Jing R, Wang F, Wang S, Cheng Z, Zhang X, Jiang L, Wang J, Wang J, Zhao Z, Guo X, Lin Q, et al. Disruption of gene SPL35, encoding a novel CUE domain-containing protein, leads to cell death and enhanced disease response in rice. Plant Biotechnology Journal. PMID 30771255 DOI: 10.1111/pbi.13093  0.107
2024 Liu J, Ma J, Wen J, Zhou X. A Cell Cycle-aware Network for Data Integration and Label Transferring of Single-cell RNA-seq and ATAC-seq. Biorxiv : the Preprint Server For Biology. PMID 38352302 DOI: 10.1101/2024.01.31.578213  0.106
2013 Sakuma S, Pourkheirandish M, Hensel G, Kumlehn J, Stein N, Tagiri A, Yamaji N, Ma JF, Sassa H, Koba T, Komatsuda T. Divergence of expression pattern contributed to neofunctionalization of duplicated HD-Zip I transcription factor in barley. The New Phytologist. 197: 939-48. PMID 23293955 DOI: 10.1111/nph.12068  0.106
2017 Ma J, Li J, Yao X, Lin S, Gu Y, Xu J, Deng Z, Ma W, Zhang H. FIGNL1 is overexpressed in small cell lung cancer patients and enhances NCI-H446 cell resistance to cisplatin and etoposide. Oncology Reports. PMID 28260065 DOI: 10.3892/or.2017.5483  0.106
2021 Sun LM, Che J, Ma JF, Shen RF. Expression Level of Transcription Factor Is Responsible for Differential Aluminum Tolerance in Rice. Plants (Basel, Switzerland). 10. PMID 33810593 DOI: 10.3390/plants10040634  0.106
2018 Ma J, Matkar S, He X, Hua X. FOXO Family in regulating Cancer and Metabolism. Seminars in Cancer Biology. PMID 29410116 DOI: 10.1016/J.Semcancer.2018.01.018  0.106
2022 Inoue SI, Hayashi M, Huang S, Yokosho K, Gotoh E, Ikematsu S, Okumura M, Suzuki T, Kamura T, Kinoshita T, Ma JF. A tonoplast-localized magnesium transporter is crucial for stomatal opening in Arabidopsis under high Mg conditions. The New Phytologist. PMID 35976788 DOI: 10.1111/nph.18410  0.106
2018 Liu J, Luo W, Qin N, Ding P, Zhang H, Yang C, Mu Y, Tang H, Liu Y, Li W, Jiang Q, Chen G, Wei Y, Zheng Y, Liu C, ... ... Ma J, et al. A 55 K SNP array-based genetic map and its utilization in QTL mapping for productive tiller number in common wheat. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 30109392 DOI: 10.1007/s00122-018-3164-9  0.106
2019 Gao S, Zheng Z, Hu H, Shi H, Ma J, Liu Y, Wei Y, Zheng YL, Zhou M, Liu C. A Novel QTL Conferring Crown Rot Resistance Located on Chromosome Arm 6HL in Barley. Frontiers in Plant Science. 10: 1206. PMID 31681353 DOI: 10.3389/fpls.2019.01206  0.105
2023 Zhang L, Li S, Shan C, Liu Y, Zhang Y, Ye L, Lin Y, Xiong G, Ma J, Adnan M, Shi X, Sun X, Kuang W, Cui R. Integrated transcriptome and metabolome analysis revealed that flavonoids enhanced the resistance of against . Frontiers in Plant Science. 14: 1137299. PMID 37063174 DOI: 10.3389/fpls.2023.1137299  0.105
2020 Gao Z, Lyu Y, Zhang K, Gao M, Ma J, Wang D, Gai Z, Liu Y. [Clinical and genetic analysis of a patient with Angelman syndrome due to a frameshift variant of UBE3A gene]. Zhonghua Yi Xue Yi Chuan Xue Za Zhi = Zhonghua Yixue Yichuanxue Zazhi = Chinese Journal of Medical Genetics. 37: 1120-1123. PMID 32924115 DOI: 10.3760/cma.j.cn511374-20190912-00469  0.105
2020 Li J, Yokosho K, Liu S, Cao HR, Yamaji N, Zhu XG, Liao H, Ma JF, Chen ZC. Diel magnesium fluctuations in chloroplasts contribute to photosynthesis in rice. Nature Plants. PMID 32541951 DOI: 10.1038/s41477-020-0686-3  0.105
2018 Ma J, Wang Y, Xu N, Jin L, Liu J, Xing S, Li X. Potential large scale production of meningococcal vaccines by stable overexpression of fHbp in the rice seeds. Protein Expression and Purification. PMID 29953946 DOI: 10.1016/j.pep.2018.06.014  0.105
2020 Yang Y, Yu TF, Ma J, Chen J, Zhou YB, Chen M, Ma YZ, Wei WL, Xu ZS. The Soybean Transcription Factor Gene Confers Drought and Salt Resistances in Transgenic Plants. International Journal of Molecular Sciences. 21. PMID 31968543 DOI: 10.3390/ijms21020670  0.105
2021 Long L, Yao F, Guan F, Cheng YK, Duan L, Zhao X, Li H, Pu Z, Li W, Jiang QT, Wei Y, Ma J, Kang H, Dai S, Qi P, et al. A stable QTL on Chromosome 5BL Combined with Conferring High-level Adult-plant Resistance to Stripe Rust in Chinese Wheat Landrace Anyuehong. Phytopathology. PMID 33599530 DOI: 10.1094/PHYTO-10-20-0465-R  0.105
2023 Liu H, Zou Y, Xuan Q, Tian R, Zhu J, Qu X, Sun M, Liu Y, Tang H, Deng M, Jiang Q, Xu Q, Peng Y, Chen G, Li W, ... ... Ma J, et al. Loss of ADP-glucose transporter in barley sex1 mutant caused shrunken endosperm but with elevated protein and β-glucan content in whole meal. International Journal of Biological Macromolecules. 251: 126365. PMID 37591421 DOI: 10.1016/j.ijbiomac.2023.126365  0.105
2020 Ou C, Sun Z, He X, Li X, Fan S, Zheng X, Peng Q, Li G, Li X, Ma J. Targeting YAP1/LINC00152/FSCN1 Signaling Axis Prevents the Progression of Colorectal Cancer. Advanced Science (Weinheim, Baden-Wurttemberg, Germany). 7: 1901380. PMID 32042551 DOI: 10.1002/advs.201901380  0.105
2023 Ma J, Zhou Y, Pan P, Yu H, Wang Z, Li LL, Wang B, Yan Y, Pan Y, Ye Q, Liu T, Feng X, Xu S, Wang K, Wang X, et al. TRABID overexpression enables synthetic lethality to PARP inhibitor via prolonging 53BP1 retention at double-strand breaks. Nature Communications. 14: 1810. PMID 37002234 DOI: 10.1038/s41467-023-37499-5  0.104
2021 Yang J, Hu X, Ma J, Shi SH. Centrosome regulation and function in mammalian cortical neurogenesis. Current Opinion in Neurobiology. 69: 256-266. PMID 34303132 DOI: 10.1016/j.conb.2021.06.003  0.104
2009 Kamiya T, Tanaka M, Mitani N, Ma JF, Maeshima M, Fujiwara T. NIP1;1, an aquaporin homolog, determines the arsenite sensitivity of Arabidopsis thaliana. The Journal of Biological Chemistry. 284: 2114-20. PMID 19029297 DOI: 10.1074/jbc.M806881200  0.104
2020 Ren Y, Liu Y, Lyu Y, Gao M, Wang D, Wan Y, Ma J, Shen N, Gai Z. [Variant analysis of CCBE1 gene in a case of Hennekam lymphangiectasia-lymphedema syndrome type 1]. Zhonghua Yi Xue Yi Chuan Xue Za Zhi = Zhonghua Yixue Yichuanxue Zazhi = Chinese Journal of Medical Genetics. 37: 669-672. PMID 32472549 DOI: 10.3760/cma.j.issn.1003-9406.2020.06.018  0.104
2015 Niu Z, Liu H, Zhou M, Wang H, Liu Y, Li X, Xiong W, Ma J, Li X, Li G. Knockdown of c-Myc inhibits cell proliferation by negatively regulating the Cdk/Rb/E2F pathway in nasopharyngeal carcinoma cells. Acta Biochimica Et Biophysica Sinica. 47: 183-91. PMID 25630654 DOI: 10.1093/abbs/gmu129  0.104
2020 Li L, Liu S, Han D, Tang B, Ma J. Delivery and Biosafety of Oncolytic Virotherapy. Frontiers in Oncology. 10: 475. PMID 32373515 DOI: 10.3389/fonc.2020.00475  0.104
2014 Yokosho K, Yamaji N, Ma JF. Global transcriptome analysis of Al-induced genes in an Al-accumulating species, common buckwheat (Fagopyrum esculentum Moench). Plant & Cell Physiology. 55: 2077-91. PMID 25273892 DOI: 10.1093/pcp/pcu135  0.104
2022 Bao X, Qin D, Ma J, Zhou X, Wang J, Yao C, Zhang L, Du L. Accurate detection of α-globin gene copy number variants with two reactions using droplet digital PCR. Hematology (Amsterdam, Netherlands). 27: 198-203. PMID 35100090 DOI: 10.1080/16078454.2022.2030885  0.104
2020 Ma J, Gao J, Zhang K, Lyu Y, Gao M, Wang D, Gai Z, Liu Y. [Clinical and genetic analysis of a patient with periventricular nodular heterotopia 7 caused by NEDD4L gene variant]. Zhonghua Yi Xue Yi Chuan Xue Za Zhi = Zhonghua Yixue Yichuanxue Zazhi = Chinese Journal of Medical Genetics. 37: 41-43. PMID 31922594 DOI: 10.3760/cma.j.issn.1003-9406.2020.01.011  0.104
2022 Seok S, Kim YC, Zhang Y, Kong B, Guo G, Ma J, Kemper B, Kemper JK. Feeding activates FGF15-SHP-TFEB-mediated lipophagy in the gut. The Embo Journal. e109997. PMID 35686465 DOI: 10.15252/embj.2021109997  0.103
2011 Zheng L, Fujii M, Yamaji N, Sasaki A, Yamane M, Sakurai I, Sato K, Ma JF. Isolation and characterization of a barley yellow stripe-like gene, HvYSL5. Plant & Cell Physiology. 52: 765-74. PMID 21266459 DOI: 10.1093/pcp/pcr009  0.103
2021 Ouyang J, Zhong Y, Zhang Y, Yang L, Wu P, Hou X, Xiong F, Li X, Zhang S, Gong Z, He Y, Tang Y, Zhang W, Xiang B, Zhou M, ... Ma J, et al. Long non-coding RNAs are involved in alternative splicing and promote cancer progression. British Journal of Cancer. PMID 34750493 DOI: 10.1038/s41416-021-01600-w  0.103
2021 Konishi N, Ma JF. Three polarly localized ammonium transporter 1 members are cooperatively responsible for ammonium uptake in rice under low ammonium condition. The New Phytologist. PMID 34392543 DOI: 10.1111/nph.17679  0.103
2013 Gong Z, Zhang S, Tang K, Li X, Xiang B, Xiang J, Zhou M, Ma J, Zeng Z, Xiong W, Li G. [MicroRNAs and nonresolving inflammation-related cancer]. Zhong Nan Da Xue Xue Bao. Yi Xue Ban = Journal of Central South University. Medical Sciences. 38: 639-44. PMID 23828710 DOI: 10.3969/j.issn.1672-7347.2013.06.014  0.103
2020 Katona BW, Hojnacki T, Glynn RA, Paulosky KE, Szigety KM, Cao Y, Zhang X, Feng Z, He X, Ma J, Hua X. Menin-mediated repression of glycolysis in combination with autophagy protects colon cancer against small molecule EGFR inhibitors. Molecular Cancer Therapeutics. PMID 32879052 DOI: 10.1158/1535-7163.Mct-20-0101  0.102
2022 Wang P, Yamaji N, Ma JF. A Golgi-localized glycosyltransferase, OsGT14;1 is required for growth of both roots and shoots in rice. The Plant Journal : For Cell and Molecular Biology. PMID 35791277 DOI: 10.1111/tpj.15897  0.102
2012 Zheng Y, Zhang W, Ye Q, Zhou Y, Xiong W, He W, Deng M, Zhou M, Guo X, Chen P, Fan S, Liu X, Wang Z, Li X, Ma J, et al. Inhibition of Epstein-Barr virus infection by lactoferrin. Journal of Innate Immunity. 4: 387-98. PMID 22433582 DOI: 10.1159/000336178  0.102
2016 Yao Q, Ma J, Wang X, Guo M, Li Y, Wang X. A pilot study on interaction between donkey tetherin and EIAV stains with different virulent and replication characteristics. Microbial Pathogenesis. PMID 27816678 DOI: 10.1016/j.micpath.2016.10.019  0.102
2013 Ma J, Hou LN, Rong ZX, Liang P, Fang C, Li HF, Qi H, Chen HZ. Antidepressant desipramine leads to C6 glioma cell autophagy: implication for the adjuvant therapy of cancer. Anti-Cancer Agents in Medicinal Chemistry. 13: 254-60. PMID 22934693 DOI: 10.2174/1871520611313020011  0.102
2019 Wang J, Zheng X, Qin Z, Wei L, Lu Y, Peng Q, Gao Y, Zhang X, Zhang X, Li Z, Fu Y, Liu P, Liu C, Yan Q, Xiong W, ... ... Ma J, et al. Epstein-Barr virus miR-BART3-3p promotes tumorigenesis by regulating senescence pathway in gastric cancer. The Journal of Biological Chemistry. PMID 30674552 DOI: 10.1074/jbc.RA118.006853  0.102
2015 Du C, Ma J, Liu Q, Li YF, He XJ, Lin YZ, Wang XF, Meng QW, Wang X, Zhou JH. Mice transgenic for equine cyclin T1 and ELR1 are susceptible to equine infectious anemia virus infection. Retrovirology. 12: 36. PMID 25928027 DOI: 10.1186/s12977-015-0163-7  0.102
2024 Bialy N, Alber F, Andrews B, Angelo M, Beliveau B, Bintu L, Boettiger A, Boehm U, Brown CM, Maina MB, Chambers JJ, Cimini BA, Eliceiri K, Errington R, Faklaris O, ... ... Ma J, et al. Harmonizing the Generation and Pre-publication Stewardship of FAIR Image Data. Arxiv. PMID 38351940  0.101
2022 Yang Y, Ye S, Lyu Y, Xin H, Gao M, Ma J, Wang D, Gai Z, Liu Y. [Analysis of PRX gene variants in a child with Charcot-Marie-Tooth disease type 4F]. Zhonghua Yi Xue Yi Chuan Xue Za Zhi = Zhonghua Yixue Yichuanxue Zazhi = Chinese Journal of Medical Genetics. 39: 749-753. PMID 35810435 DOI: 10.3760/cma.j.cn511374-20210311-00221  0.101
2018 Zhou X, Zhang C, Li M, Ma J, Chen Q, Sun S, Zhang L. [Identification of 22q11.2 microdeletion among patients with congenital heart diseases using droplet digital PCR]. Zhonghua Yi Xue Yi Chuan Xue Za Zhi = Zhonghua Yixue Yichuanxue Zazhi = Chinese Journal of Medical Genetics. 35: 47-50. PMID 29419859 DOI: 10.3760/cma.j.issn.1003-9406.2018.01.010  0.101
2018 Zheng X, Wang J, Wei L, Peng Q, Gao Y, Fu Y, Lu Y, Qin Z, Zhang X, Lu J, Ou C, Li Z, Zhang X, Liu P, Xiong W, ... ... Ma J, et al. Epstein-Barr Virus miR-BART5-3p inhibits p53 expression. Journal of Virology. PMID 30209170 DOI: 10.1128/JVI.01022-18  0.101
2019 Ma J, Fang L, Yang Q, Hibberd S, Du WW, Wu N, Yang BB. Posttranscriptional regulation of AKT by circular RNA angiomotin- like 1 mediates chemoresistance against paclitaxel in breast cancer cells. Aging. 11. PMID 31819016 DOI: 10.18632/aging.102535  0.101
2023 Sun K, Yao H, Zhang P, Sun Y, Ma J, Xia Q. Emerging landscape of circFNDC3B and its role in human malignancies. Frontiers in Oncology. 13: 1097956. PMID 36793611 DOI: 10.3389/fonc.2023.1097956  0.101
2018 Sun SK, Chen Y, Che J, Konishi N, Tang Z, Miller AJ, Ma JF, Zhao FJ. Decreasing arsenic accumulation in rice by overexpressing OsNIP1;1 and OsNIP3;3 through disrupting arsenite radial transport in roots. The New Phytologist. PMID 29749629 DOI: 10.1111/nph.15190  0.101
2022 Zhang Y, Wei M, Wu Y, Wang J, Hong Y, Huang Y, Yuan L, Ma J, Wang K, Wang S, Shi Y, Wang Z, Guo H, Xiao J, Yang C, et al. Cross-species tropism and antigenic landscapes of circulating SARS-CoV-2 variants. Cell Reports. 110558. PMID 35303476 DOI: 10.1016/j.celrep.2022.110558  0.1
2020 Zhang Y, Wang Z, Ma J, Huo J, Li Y, Wang Y, Chen H, Shan L, Ma X. Bioinformatics Identification of the Expression and Clinical Significance of E2F Family in Endometrial Cancer. Frontiers in Genetics. 11: 557188. PMID 33329696 DOI: 10.3389/fgene.2020.557188  0.1
2023 Xue B, Yang Q, Zhang Q, Wan X, Fang D, Lin X, Sun G, Gobbo G, Cao F, Mathiowetz AM, Burke BJ, Kumpf RA, Rai BK, Wood GPF, Pickard FC, ... ... Ma J, et al. Development and Comprehensive Benchmark of a High-Quality AMBER-Consistent Small Molecule Force Field with Broad Chemical Space Coverage for Molecular Modeling and Free Energy Calculation. Journal of Chemical Theory and Computation. PMID 38157475 DOI: 10.1021/acs.jctc.3c00920  0.099
2019 Sun X, Zhang L, Tang Z, Shi X, Ma J, Cui R. Transcriptome analysis of roots from resistant and susceptible rice varieties infected with Hirschmanniella mucronata. Febs Open Bio. PMID 31571430 DOI: 10.1002/2211-5463.12737  0.099
2014 Xia J, Yamaji N, Ma JF. An appropriate concentration of arginine is required for normal root growth in rice. Plant Signaling & Behavior. 9: e28717. PMID 25764439 DOI: 10.4161/psb.28717  0.099
2003 Nie X, Zhang B, Li X, Xiang J, Xiao B, Ma J, Zhou M, Zhu S, Lu H, Gui R, Shen S, Li G. Cloning, expression, and mutation analysis of NOR1, a novel human gene down-regulated in HNE1 nasopharyngeal carcinoma cell line. Journal of Cancer Research and Clinical Oncology. 129: 410-4. PMID 12819961 DOI: 10.1007/s00432-003-0451-9  0.099
2013 Xie S, Zhu M, Lv G, Geng Y, Chen G, Ma J, Wang G. Overexpression of Ras homologous C (RhoC) induces malignant transformation of hepatocytes in vitro and in nude mouse xenografts. Plos One. 8: e54493. PMID 23382905 DOI: 10.1371/journal.pone.0054493  0.099
2021 Zhang Y, Wang S, Wu Y, Hou W, Yuan L, Shen C, Wang J, Ye J, Zheng Q, Ma J, Xu J, Wei M, Li Z, Nian S, Xiong H, et al. Virus-Free and Live-Cell Visualizing SARS-CoV-2 Cell Entry for Studies of Neutralizing Antibodies and Compound Inhibitors. Small Methods. 5: 2001031. PMID 33614907 DOI: 10.1002/smtd.202001031  0.099
2011 Zhao M, Ma J, Zhu HY, Zhang XH, Du ZY, Xu YJ, Yu XD. Apigenin inhibits proliferation and induces apoptosis in human multiple myeloma cells through targeting the trinity of CK2, Cdc37 and Hsp90. Molecular Cancer. 10: 104. PMID 21871133 DOI: 10.1186/1476-4598-10-104  0.099
2009 Zhang K, Ma J, Wang Y, Zhang XG. Three new species of Piricaudiopsis from southern China. Mycologia. 101: 417-22. PMID 19537214 DOI: 10.3852/08-147  0.099
2009 Yamaji N, Huang CF, Nagao S, Yano M, Sato Y, Nagamura Y, Ma JF. A zinc finger transcription factor ART1 regulates multiple genes implicated in aluminum tolerance in rice. The Plant Cell. 21: 3339-49. PMID 19880795 DOI: 10.1105/tpc.109.070771  0.098
2014 Zheng L, Fu Y, Zhuang L, Gai R, Ma J, Lou J, Zhu H, He Q, Yang B. Simultaneous NF-κB inhibition and E-cadherin upregulation mediate mutually synergistic anticancer activity of celastrol and SAHA in vitro and in vivo. International Journal of Cancer. 135: 1721-32. PMID 24615207 DOI: 10.1002/ijc.28810  0.098
2022 Bo GY, Chen ZY, Gong ZB, Ma J. [Advances in On-site Analytical Methods for Inorganic Arsenic in Environmental Water]. Huan Jing Ke Xue= Huanjing Kexue. 43: 4845-4857. PMID 36437057 DOI: 10.13227/j.hjkx.202206023  0.098
2019 Li P, Deng Y, Shu H, Lin K, Chen N, Jiang Y, Chen J, Yuan D, Ma J. High-frequency underway analysis of ammonium in coastal waters using an integrated syringe-pump-based environmental-water analyzer (iSEA). Talanta. 195: 638-646. PMID 30625595 DOI: 10.1016/j.talanta.2018.11.108  0.098
2021 Qiu L, Liu J, Kuang W, Cui R, Zhang L, Ma J. First Report of Anthracnose Caused by Colletotrichum fructicola on Loropetalum chinense in China. Plant Disease. PMID 34844453 DOI: 10.1094/PDIS-07-21-1531-PDN  0.098
2019 Ma J, Zhang H, Li S, Zou Y, Li T, Liu J, Ding P, Mu Y, Tang H, Deng M, Liu Y, Jiang Q, Chen G, Kang H, Li W, et al. Identification of quantitative trait loci for kernel traits in a wheat cultivar Chuannong16. Bmc Genetics. 20: 77. PMID 31619163 DOI: 10.1186/s12863-019-0782-4  0.098
2010 Wang X, Wang S, Lin Y, Jiang C, Ma J, Zhao L, Lv X, Wang F, Shen R, Kong X, Zhou J. Genomic comparison between attenuated Chinese equine infectious anemia virus vaccine strains and their parental virulent strains. Archives of Virology. 156: 353-7. PMID 21136127 DOI: 10.1007/s00705-010-0877-8  0.098
2013 Chen P, Guo X, Zhou H, Zhang W, Zeng Z, Liao Q, Li X, Xiang B, Yang J, Ma J, Zhou M, Peng S, Xiang J, Li X, L E CW, et al. SPLUNC1 regulates cell progression and apoptosis through the miR-141-PTEN/p27 pathway, but is hindered by LMP1. Plos One. 8: e56929. PMID 23472073 DOI: 10.1371/journal.pone.0056929  0.097
2023 Chidester B, Zhou T, Alam S, Ma J. SPICEMIX enables integrative single-cell spatial modeling of cell identity. Nature Genetics. 55: 78-88. PMID 36624346 DOI: 10.1038/s41588-022-01256-z  0.097
2015 Gao K, Xu C, Jin X, Wumaier R, Ma J, Peng J, Wang Y, Tang Y, Yu L, Zhang P. HDGF-related protein-2 (HRP-2) acts as an oncogene to promote cell growth in hepatocellular carcinoma. Biochemical and Biophysical Research Communications. 458: 849-55. PMID 25689719 DOI: 10.1016/j.bbrc.2015.02.042  0.097
2017 Lei GJ, Yokosho K, Yamaji N, Fujii-Kashino M, Ma JF. Functional characterization of two half-size ABC transporter genes in aluminium-accumulating buckwheat. The New Phytologist. PMID 28620956 DOI: 10.1111/nph.14648  0.097
2021 Wang Y, Liang F, Guan F, Yao F, Long L, Zhao X, Duan L, Wu Y, Li H, Li W, Jiang Q, Wei Y, Ma J, Qi P, Deng M, et al. Molecular Mapping and Analysis of an Excellent Quantitative Trait Loci Conferring Adult-Plant Resistance to Stripe Rust in Chinese Wheat Landrace Gaoxianguangtoumai. Frontiers in Plant Science. 12: 756557. PMID 34858460 DOI: 10.3389/fpls.2021.756557  0.097
2011 Chen G, Komatsuda T, Ma JF, Li C, Yamaji N, Nevo E. A functional cutin matrix is required for plant protection against water loss. Plant Signaling & Behavior. 6: 1297-9. PMID 22019635 DOI: 10.4161/psb.6.9.17507  0.097
2009 Wang X, Jiang F, Ma J, Hou X. [Biodynamic responses of the seated posture of human upper-body under horizontal and vertical stimuli]. Sheng Wu Yi Xue Gong Cheng Xue Za Zhi = Journal of Biomedical Engineering = Shengwu Yixue Gongchengxue Zazhi. 25: 101-4. PMID 18435267  0.096
2013 Yin J, Vogel U, Wang H, Ma Y, Wang C, Liang D, Liu J, Yue L, Zhao Y, Ma J. HapMap-based study identifies risk sub-region on chromosome 19q13.3 in relation to lung cancer among Chinese. Cancer Epidemiology. 37: 923-9. PMID 24140460 DOI: 10.1016/j.canep.2013.09.016  0.096
2021 Qiu L, Liu J, Kuang W, Zhang K, Ma J. First Report of Pestalotiopsis chamaeropis Causing Leaf Spot on Eurya nitida in China. Plant Disease. PMID 34406788 DOI: 10.1094/PDIS-06-21-1170-PDN  0.096
2021 Wang D, Song L, Shen L, Zhang K, Lv Y, Gao M, Ma J, Wan Y, Gai Z, Liu Y. Mutational Characteristics of Causative Genes in Chinese Hereditary Spherocytosis Patients: a Report on Fourteen Cases and a Review of the Literature. Frontiers in Pharmacology. 12: 644352. PMID 34335240 DOI: 10.3389/fphar.2021.644352  0.096
2020 Cui X, Liu XL, Shen G, Ma J, Husain F, Rocher D, Zumberge JE, Bryant DA, Summons RE. Niche expansion for phototrophic sulfur bacteria at the Proterozoic-Phanerozoic transition. Proceedings of the National Academy of Sciences of the United States of America. PMID 32647063 DOI: 10.1073/Pnas.2006379117  0.096
2021 Shen Z, Lin Y, Yang J, Jörg DJ, Peng Y, Zhang X, Xu Y, Hernandez L, Ma J, Simons BD, Shi SH. Distinct progenitor behavior underlying neocortical gliogenesis related to tumorigenesis. Cell Reports. 34: 108853. PMID 33730566 DOI: 10.1016/j.celrep.2021.108853  0.096
2020 Gao M, Huang Y, Zhang K, Lyu Y, Dong R, Ma J, Wang D, Gai Z, Liu Y. [Identification of two novel SLC19A3 variants in a Chinese patient with Biotin-thiamine responsive basal ganglia disease]. Zhonghua Yi Xue Yi Chuan Xue Za Zhi = Zhonghua Yixue Yichuanxue Zazhi = Chinese Journal of Medical Genetics. 37: 162-165. PMID 32034746 DOI: 10.3760/cma.j.issn.1003-9406.2020.02.016  0.095
2005 Wang L, Ma J, Li J, Li X, Zhang Q, Peng S, Peng C, Zhou M, Xiong W, Yang J, Zhou J, Fan S, Tan C, Yan Q, Shen S, et al. NGX6 gene inhibits cell proliferation and plays a negative role in EGFR pathway in nasopharyngeal carcinoma cells. Journal of Cellular Biochemistry. 95: 64-73. PMID 15723283 DOI: 10.1002/jcb.20393  0.095
2021 Ma J, Liu L, Ling Y, Zheng J. Polypeptide LTX-315 reverses the cisplatin chemoresistance of ovarian cancer cells via regulating Beclin-1/PI3K/mTOR signaling pathway. Journal of Biochemical and Molecular Toxicology. e22853. PMID 34309113 DOI: 10.1002/jbt.22853  0.095
2019 Yu E, Yamaji N, Ma JF. Altered root structure affects both expression and cellular localization of transporters for mineral element uptake in rice. Plant & Cell Physiology. PMID 31747007 DOI: 10.1093/pcp/pcz213  0.095
2024 Lu S, Ma Z, Zhou W, Zeng H, Ma J, Deng H, Zhang P. Association of sleep traits with male fertility: a two-sample Mendelian randomization study. Frontiers in Genetics. 15: 1353438. PMID 38456015 DOI: 10.3389/fgene.2024.1353438  0.095
2021 Du WW, Xu J, Yang W, Wu N, Li F, Zhou L, Wang S, Li X, He AT, Du KY, Zeng K, Ma J, Lyu J, Zhang C, Zhou C, et al. A Neuroligin Isoform Translated by circNlgn Contributes to Cardiac Remodeling. Circulation Research. PMID 34261347 DOI: 10.1161/CIRCRESAHA.120.318364  0.095
2022 Fang T, Bo G, Zhang Z, Ma J. Real-Time Underway Mapping of Nutrient Concentrations of Surface Seawater Using an Autonomous Flow Analyzer. Analytical Chemistry. PMID 35917455 DOI: 10.1021/acs.analchem.2c02000  0.095
2020 Liu X, Yang X, Li Y, Wang X, Ma J, Jiang W, Liu Y, Sun W, Gong Y. Generation of patient-specific pluripotent induced stem cell line SDUBMSI002-A from a patient with X-linked mental retardation syndrome. Stem Cell Research. 43: 101724. PMID 32078988 DOI: 10.1016/j.scr.2020.101724  0.095
2019 Li X, Li Y, Karim H, Li Y, Zhong XJ, Tang H, Qi PF, Ma J, Wang JR, Chen GY, Pu ZE, Li W, Tang Z, Lan XJ, Deng M, et al. The production of wheat-Aegilops sharonensis 1Ssh chromosome substitution lines harboring alien novel high-molecular-weight glutenin subunits. Genome. PMID 31846356 DOI: 10.1139/gen-2019-0106  0.095
2018 Chen M, Zhang H, Shi Z, Li Y, Zhang X, Gao Z, Zhou L, Ma J, Xu Q, Guan J, Cheng Y, Jiao S, Zhou Z. The MST4-MOB4 complex disrupts the MST1-MOB1 complex in the Hippo-YAP pathway and plays a pro-oncogenic role in pancreatic cancer. The Journal of Biological Chemistry. PMID 30072378 DOI: 10.1074/jbc.RA118.003279  0.095
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