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Joshua E. Sokoloski, Ph.D. - Publications

Affiliations: 
2011 Chemistry Pennsylvania State University, State College, PA, United States 
Area:
RNA Folding and Catalysis
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16 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Mersch KN, Sokoloski JE, Nguyen B, Galletto R, Lohman TM. "Helicase" Activity promoted through dynamic interactions between a ssDNA translocase and a diffusing SSB protein. Proceedings of the National Academy of Sciences of the United States of America. 120: e2216777120. PMID 37011199 DOI: 10.1073/pnas.2216777120  0.718
2017 Nguyen B, Ordabayev Y, Sokoloski JE, Weiland E, Lohman TM. Large domain movements upon UvrD dimerization and helicase activation. Proceedings of the National Academy of Sciences of the United States of America. PMID 29087333 DOI: 10.1073/pnas.1712882114  0.71
2017 Sokoloski JE, Galletto R, Lohman TM. Superfamily 1 Helicase PIF1 Can Push Replication Protein a Along Single Stranded DNA and into Duplex DNA Biophysical Journal. 112: 372a. DOI: 10.1016/J.Bpj.2016.11.2020  0.736
2016 Simon MJ, Sokoloski J, Hao L, Weiland E, Lohman TM. Processive DNA Unwinding by RecBCD Helicase in the Absence of Canonical Motor Translocation. Journal of Molecular Biology. PMID 27422010 DOI: 10.1016/J.Jmb.2016.07.002  0.714
2016 Sokoloski JE, Kozlov AG, Galletto R, Lohman TM. Chemo-mechanical pushing of proteins along single-stranded DNA. Proceedings of the National Academy of Sciences of the United States of America. PMID 27185951 DOI: 10.1073/Pnas.1602878113  0.787
2016 Chowdhury F, Li IT, Ngo TT, Leslie BJ, Kim BC, Sokoloski JE, Weiland E, Wang X, Chemla YR, Lohman TM, Ha T. Defining single molecular forces required for Notch activation using nano yoyo. Nano Letters. PMID 27167603 DOI: 10.1021/Acs.Nanolett.6B01403  0.6
2016 Sokoloski JE, Kozlov A, Galletto R, Lohman TM. Single Stranded DNA Translocases can Push Single Stranded DNA Binding Proteins along Single Stranded DNA Biophysical Journal. 110: 240a. DOI: 10.1016/J.Bpj.2015.11.1321  0.787
2015 Comstock MJ, Whitley KD, Jia H, Sokoloski J, Lohman TM, Ha T, Chemla YR. Protein structure. Direct observation of structure-function relationship in a nucleic acid-processing enzyme. Science (New York, N.Y.). 348: 352-4. PMID 25883359 DOI: 10.1126/Science.Aaa0130  0.697
2014 Nguyen B, Sokoloski J, Galletto R, Elson EL, Wold MS, Lohman TM. Diffusion of human replication protein A along single-stranded DNA. Journal of Molecular Biology. 426: 3246-61. PMID 25058683 DOI: 10.1016/J.Jmb.2014.07.014  0.748
2014 Nguyen B, Sokoloski J, Wold MS, Galletto R, Elson EL, Lohman TM. Human Replication Protein a (RPA) Can Diffuse Along Single Stranded DNA Biophysical Journal. 106: 73a. DOI: 10.1016/J.Bpj.2013.11.480  0.762
2012 Patel S, Blose JM, Sokoloski JE, Pollack L, Bevilacqua PC. Specificity of the double-stranded RNA-binding domain from the RNA-activated protein kinase PKR for double-stranded RNA: insights from thermodynamics and small-angle X-ray scattering. Biochemistry. 51: 9312-22. PMID 23140277 DOI: 10.1021/Bi300935P  0.74
2012 Toroney R, Hull CM, Sokoloski JE, Bevilacqua PC. Mechanistic characterization of the 5'-triphosphate-dependent activation of PKR: lack of 5'-end nucleobase specificity, evidence for a distinct triphosphate binding site, and a critical role for the dsRBD. Rna (New York, N.Y.). 18: 1862-74. PMID 22912486 DOI: 10.1261/Rna.034520.112  0.736
2012 Sokoloski JE, Bevilacqua PC. Analysis of RNA folding and ligand binding by conventional and high-throughput calorimetry. Methods in Molecular Biology (Clifton, N.J.). 905: 145-74. PMID 22736003 DOI: 10.1007/978-1-61779-949-5_10  0.631
2012 Sokoloski JE, Dombrowski SE, Bevilacqua PC. Thermodynamics of ligand binding to a heterogeneous RNA population in the malachite green aptamer. Biochemistry. 51: 565-72. PMID 22192051 DOI: 10.1021/Bi201642P  0.605
2011 Mukherjee S, Yakhnin H, Kysela D, Sokoloski J, Babitzke P, Kearns DB. CsrA-FliW interaction governs flagellin homeostasis and a checkpoint on flagellar morphogenesis in Bacillus subtilis. Molecular Microbiology. 82: 447-61. PMID 21895793 DOI: 10.1111/J.1365-2958.2011.07822.X  0.327
2011 Sokoloski JE, Godfrey SA, Dombrowski SE, Bevilacqua PC. Prevalence of syn nucleobases in the active sites of functional RNAs. Rna (New York, N.Y.). 17: 1775-87. PMID 21873463 DOI: 10.1261/Rna.2759911  0.651
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