James R. Garey - Publications

Affiliations: 
Biology (Cell Biology, Microbiology, Molecular Biology) University of South Florida, Tampa, FL, United States 
Area:
Ecology Biology, Oceanography Biology, Molecular Biology

49 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Scharping RJ, Garey JR. Relationship between aquifer biofilms and unattached microbial indicators of urban groundwater contamination. Molecular Ecology. PMID 33113280 DOI: 10.1111/mec.15713  0.331
2020 Davis MC, Messina MA, Nicolosi G, Petralia S, Baker MD, Mayne CKS, Dinon CM, Moss CJ, Onac BP, Garey JR. Surface runoff alters cave microbial community structure and function. Plos One. 15: e0232742. PMID 32374788 DOI: 10.1371/Journal.Pone.0232742  0.434
2020 Farid A, Franck AR, Bolin J, Garey JR. Expansion of the genus in North America to include , sp. nov., and , comb. nov. Mycologia. 1-15. PMID 32074024 DOI: 10.1080/00275514.2019.1685359  0.772
2020 Davis MC, Messina MA, Nicolosi G, Petralia S, Baker MD, Mayne CKS, Dinon CM, Moss CJ, Onac BP, Garey JR. Microbial community assemblages. Plos One. DOI: 10.1371/Journal.Pone.0232742.S002  0.345
2018 Farid A, Gelardi M, Angelini C, Franck AR, Costanzo F, Kaminsky L, Ercole E, Baroni TJ, White AL, Garey JR, Smith ME, Vizzini A. and are no longer alone: gen. nov. (), a new smooth-spored lamellate genus to accommodate the American species . Fungal Systematics and Evolution. 2: 341-359. PMID 32467893 DOI: 10.3114/fuse.2018.02.10  0.735
2018 Davis M, Garey J. Microbial Function and Hydrochemistry within a Stratified Anchialine Sinkhole: A Window into Coastal Aquifer Interactions Water. 10: 972. DOI: 10.3390/W10080972  0.38
2018 Scharping RJ, Garman KM, Henry RP, Eswara PJ, Garey JR. The fate of urban springs: Pumping-induced seawater intrusion in a phreatic cave Journal of Hydrology. 564: 230-245. DOI: 10.1016/J.Jhydrol.2018.07.016  0.414
2017 Rubelmann H, Karlen DJ, Garey JR. Changes in Eukaryotic and Bacterial Communities along a 120 m Transect Associated with a Shallow Marine Hydrothermal Vent Frontiers in Marine Science. 4. DOI: 10.3389/Fmars.2017.00177  0.72
2017 Farid A, Franck AR, Garey JR. Boletus rubricitrinus belongs in Pulchroboletus (Boletaceae). Czech Mycology. 69: 143-162. DOI: 10.33585/CMY.69204  0.725
2017 Menning DM, Carraher-Stross WA, Graham ED, Thomas DN, Phillips AR, Scharping RJ, Garey JR. Aquifer Discharge Drives Microbial Community Change in Karst Estuaries Estuaries and Coasts. 41: 430-443. DOI: 10.1007/S12237-017-0281-7  0.437
2015 Menning DM, Wynn JG, Garey JR. Karst estuaries are governed by interactions between inland hydrological conditions and sea level Journal of Hydrology. 527: 718-733. DOI: 10.1016/J.Jhydrol.2015.05.021  0.371
2014 Menning DM, Boop LM, Graham ED, Garey JR. Molecular analyses of microbial abundance and diversity in the water column of anchialine caves in Mallorca, Spain International Journal of Speleology. 43: 217-226. DOI: 10.5038/1827-806X.43.2.9  0.788
2014 Nielsen UN, Ayres E, Wall DH, Li G, Bardgett RD, Wu T, Garey JR. Global-scale patterns of assemblage structure of soil nematodes in relation to climate and ecosystem properties Global Ecology and Biogeography. 23: 968-978. DOI: 10.1111/Geb.12177  0.347
2013 Franck AR, Cochrane BJ, Garey JR. Phylogeny, biogeography, and infrageneric classification of Harrisia (Cactaceae) Systematic Botany. 38: 210-223. DOI: 10.1600/036364413X662105  0.738
2013 Franck AR, Cochrane BJ, Garey JR. Relationships and dispersal of the Caribbean species of Harrisia (Sect. Harrisia; Cactaceae) using AFLPs and seven DNA regions Taxon. 62: 486-497. DOI: 10.12705/623.5  0.733
2012 Franck AR, Cochrane BJ, Garey JR. Low-copy nuclear primers and ycf1 primers in Cactaceae. American Journal of Botany. 99: e405-7. PMID 23002162 DOI: 10.3732/Ajb.1200128  0.74
2012 Vaughn R, Garnhart N, Garey JR, Thomas WK, Livingston BT. Sequencing and analysis of the gastrula transcriptome of the brittle star Ophiocoma wendtii. Evodevo. 3: 19. PMID 22938175 DOI: 10.1186/2041-9139-3-19  0.55
2012 Bengtsson J, Hartmann M, Unterseher M, Vaishampayan P, Abarenkov K, Durso L, Bik EM, Garey JR, Eriksson KM, Nilsson RH. Megraft: a software package to graft ribosomal small subunit (16S/18S) fragments onto full-length sequences for accurate species richness and sequencing depth analysis in pyrosequencing-length metagenomes and similar environmental datasets. Research in Microbiology. 163: 407-12. PMID 22824070 DOI: 10.1016/J.Resmic.2012.07.001  0.468
2011 Wu T, Ayres E, Bardgett RD, Wall DH, Garey JR. Molecular study of worldwide distribution and diversity of soil animals. Proceedings of the National Academy of Sciences of the United States of America. 108: 17720-5. PMID 22006309 DOI: 10.1073/Pnas.1103824108  0.328
2011 Garman KM, Rubelmann H, Karlen DJ, Wu T, Garey JR. Comparison of an inactive submarine spring with an active nearshore anchialine spring in Florida Hydrobiologia. 677: 65-87. DOI: 10.1007/S10750-011-0740-2  0.662
2010 Karlen DJ, Price RE, Pichler T, Garey JR. Changes in benthic macrofauna associated with a shallow-water hydrothermal vent gradient in papua new guinea Pacific Science. 64: 391-404. DOI: 10.2984/64.3.391  0.781
2009 Holland ND, Campbell TG, Garey JR, Holland LZ, Wilson NG. The Florida amphioxus (Cephalochordata) hosts larvae of the tapeworm Acanthobothrium brevissime: Natural history, anatomy and taxonomic identification of the parasite Acta Zoologica. 90: 75-86. DOI: 10.1111/J.1463-6395.2008.00343.X  0.64
2009 Wu T, Ayres E, Li G, Bardgett RD, Wall DH, Garey JR. Molecular profiling of soil animal diversity in natural ecosystems: Incongruence of molecular and morphological results Soil Biology and Biochemistry. 41: 849-857. DOI: 10.1016/J.Soilbio.2009.02.003  0.318
2008 Garey JR, McInnes SJ, Nichols PB. Global diversity of tardigrades (Tardigrada) in freshwater Hydrobiologia. 595: 101-106. DOI: 10.1007/S10750-007-9123-0  0.776
2006 Pichler T, Amend JP, Garey J, Hallock P, Hsia NP, Karlen DJ, Meyer-Dombard DR, McCloskey BJ, Price RE. A natural laboratory to study arsenic geobiocomplexity Eos, Transactions American Geophysical Union. 87: 221. DOI: 10.1029/2006Eo230002  0.767
2006 Nichols PB, Nelson DR, Garey JR. A family level analysis of tardigrade phylogeny Hydrobiologia. 558: 53-60. DOI: 10.1007/S10750-005-1414-8  0.747
2005 Mallatt JM, Garey JR, Shultz JW. Erratum to: “Ecdysozoan phylogeny and Bayesian inference: first use of nearly complete 28S and 18S rRNA gene sequences to classify the arthropods and their kin” [Mol. Phylogenet. Evol. 31 (2004) 178–191] Molecular Phylogenetics and Evolution. 34: 457. DOI: 10.1016/J.Ympev.2004.10.011  0.37
2005 Michael Garman K, Garey JR. The transition of a freshwater karst aquifer to an anoxic marine system Estuaries. 28: 686-693. DOI: 10.1007/Bf02732907  0.421
2004 Mallatt JM, Garey JR, Shultz JW. Ecdysozoan phylogeny and Bayesian inference: first use of nearly complete 28S and 18S rRNA gene sequences to classify the arthropods and their kin. Molecular Phylogenetics and Evolution. 31: 178-91. PMID 15019618 DOI: 10.1016/J.Ympev.2003.07.013  0.401
2003 Massey SE, Moura G, Beltrão P, Almeida R, Garey JR, Tuite MF, Santos MA. Comparative evolutionary genomics unveils the molecular mechanism of reassignment of the CTG codon in Candida spp. Genome Research. 13: 544-57. PMID 12670996 DOI: 10.1101/Gr.811003  0.324
2002 Garey JR. The lesser-known protostome taxa: an introduction and a tribute to robert p. Higgins. Integrative and Comparative Biology. 42: 611-8. PMID 21708757 DOI: 10.1093/Icb/42.3.611  0.303
2002 Bleidorn C, Schmidt-Rhaesa A, Garey JR. Systematic relationships of Nematomorpha based on molecular and morphological data Invertebrate Biology. 121: 357-364. DOI: 10.1111/J.1744-7410.2002.Tb00136.X  0.416
2001 Gray KM, Garey JR. The evolution of bacterial LuxI and LuxR quorum sensing regulators Microbiology. 147: 2379-2387. PMID 11496014 DOI: 10.1099/00221287-147-8-2379  0.367
2001 Garey JR. Ecdysozoa: The relationship between Cycloneuralia and Panarthropoda Zoologischer Anzeiger. 240: 321-330. DOI: 10.1078/0044-5231-00039  0.347
2000 Swalla BJ, Cameron CB, Corley LS, Garey JR. Urochordates are monophyletic within the deuterostomes. Systematic Biology. 49: 52-64. PMID 12116483 DOI: 10.1080/10635150050207384  0.426
2000 Cameron CB, Garey JR, Swalla BJ. Evolution of the chordate body plan: new insights from phylogenetic analyses of deuterostome phyla. Proceedings of the National Academy of Sciences of the United States of America. 97: 4469-74. PMID 10781046 DOI: 10.1073/Pnas.97.9.4469  0.375
1998 Schmidt-Rhaesa A, Bartolomaeus T, Lemburg C, Ehlers U, Garey JR. The position of the Arthropoda in the phylogenetic system. Journal of Morphology. 238: 263-285. PMID 29852696 DOI: 10.1002/(Sici)1097-4687(199812)238:3<263::Aid-Jmor1>3.0.Co;2-L  0.367
1998 Near TJ, Garey JR, Nadler SA. Phylogenetic relationships of the Acanthocephala inferred from 18S ribosomal DNA sequences. Molecular Phylogenetics and Evolution. 10: 287-98. PMID 10051382 DOI: 10.1006/Mpev.1998.0569  0.434
1998 Mushegian AR, Garey JR, Martin J, Liu LX. Large-scale taxonomic profiling of eukaryotic model organisms: A comparison of orthologous proteins encoded by the human, fly, nematode, and yeast genomes Genome Research. 8: 590-598. PMID 9647634 DOI: 10.1101/Gr.8.6.590  0.345
1998 Blaxter ML, De Ley P, Garey JR, Liu LX, Scheldeman P, Vierstraete A, Vanfleteren JR, Mackey LY, Dorris M, Frisse LM, Vida JT, Thomas WK. A molecular evolutionary framework for the phylum Nematoda. Nature. 392: 71-5. PMID 9510248 DOI: 10.1038/32160  0.366
1998 Garey JR, Schmidt-Rhaesa A. The Essential Role of “Minor” Phyla in Molecular Studies of Animal Evolution Integrative and Comparative Biology. 38: 907-917. DOI: 10.1093/Icb/38.6.907  0.318
1998 Garey JR, Schmidt-Rhaesa A, Near TJ, Nadler SA. The evolutionary relationships of rotifers and acanthocephalans Hydrobiologia. 387: 83-91. DOI: 10.1023/A:1017060902909  0.356
1997 Aguinaldo AM, Turbeville JM, Linford LS, Rivera MC, Garey JR, Raff RA, Lake JA. Evidence for a clade of nematodes, arthropods and other moulting animals. Nature. 387: 489-93. PMID 9168109 DOI: 10.1038/387489A0  0.415
1996 Garey JR, Near TJ, Nonnemacher MR, Nadler SA. Molecular evidence for Acanthocephala as a subtaxon of Rotifera. Journal of Molecular Evolution. 43: 287-92. PMID 8703095 DOI: 10.1007/Bf02338837  0.378
1996 Mackey LY, Winnepenninckx B, De Wachter R, Backeljau T, Emschermann P, Garey JR. 18S rRNA suggests that Entoprocta are protostomes, unrelated to Ectoprocta Journal of Molecular Evolution. 42: 552-559. PMID 8662007 DOI: 10.1007/Bf02352285  0.433
1995 Winnepenninckx B, Backeljau T, Mackey LY, Brooks JM, De Wachter R, Kumar S, Garey JR. 18S rRNA data indicate that Aschelminthes are polyphyletic in origin and consist of at least three distinct clades Molecular Biology and Evolution. 12: 1132-1137. PMID 8524046 DOI: 10.1093/Oxfordjournals.Molbev.A040287  0.352
1992 Garey JR, Labbe-Bois R, Chelstowska A, Rytka J, Harrison L, Kushner J, Labbe P. Uroporphyrinogen decarboxylase in Saccharomyces cerevisiae. HEM12 gene sequence and evidence for two conserved glycines essential for enzymatic activity. European Journal of Biochemistry / Febs. 205: 1011-6. PMID 1576986 DOI: 10.1111/J.1432-1033.1992.Tb16868.X  0.329
1988 Jhiang SM, Garey JR, Riggs AF. Exon-intron organization in genes of earthworm and vertebrate globins Science. 240: 334-336. PMID 2832953  0.568
1984 Garey JR, Riggs AF. Structure and function of hemoglobin from Urechis caupo Archives of Biochemistry and Biophysics. 228: 320-331. PMID 6696435 DOI: 10.1016/0003-9861(84)90073-0  0.566
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