J Emmett Duffy - Publications

Affiliations: 
Virginia Institute of Marine Science, Gloucester Point, VA, United States 
Area:
biodiversity, food webs, evolutionary ecology

140 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Dang P, Zhang M, Chen X, Loreau M, Duffy JE, Li X, Wen S, Han X, Liao L, Huang T, Wan C, Qin X, Siddique KHM, Schmid B. Plant diversity decreases greenhouse gas emissions by increasing soil and plant carbon storage in terrestrial ecosystems. Ecology Letters. 27: e14469. PMID 38990962 DOI: 10.1111/ele.14469  0.432
2024 McIlroy SE, Guibert I, Archana A, Chung WYH, Duffy JE, Gotama R, Hui J, Knowlton N, Leray M, Meyer C, Panagiotou G, Paulay G, Russell B, Thompson PD, Baker DM. Life goes on: Spatial heterogeneity promotes biodiversity in an urbanized coastal marine ecosystem. Global Change Biology. 30: e17248. PMID 38581126 DOI: 10.1111/gcb.17248  0.569
2022 Chak STC, Harris SE, Hultgren KM, Duffy JE, Rubenstein DR. Demographic inference provides insights into the extirpation and ecological dominance of eusocial snapping shrimps. The Journal of Heredity. PMID 35921239 DOI: 10.1093/jhered/esac035  0.81
2022 Duffy JE, Stachowicz JJ, Reynolds PL, Hovel KA, Jahnke M, Sotka EE, Boström C, Boyer KE, Cusson M, Eklöf J, Engelen AH, Eriksson BK, Fodrie FJ, Griffin JN, Hereu CM, et al. A Pleistocene legacy structures variation in modern seagrass ecosystems. Proceedings of the National Academy of Sciences of the United States of America. 119: e2121425119. PMID 35914147 DOI: 10.1073/pnas.2121425119  0.815
2022 Beatty DS, Aoki LR, Rappazzo B, Bergman C, Domke LK, Duffy JE, Dubois K, Eckert GL, Gomes C, Graham OJ, Harper L, Harvell CD, Hawthorne TL, Hessing-Lewis M, Hovel K, et al. Predictable Changes in Eelgrass Microbiomes with Increasing Wasting Disease Prevalence across 23° Latitude in the Northeastern Pacific. Msystems. e0022422. PMID 35856664 DOI: 10.1128/msystems.00224-22  0.552
2022 Ashton GV, Freestone AL, Duffy JE, Torchin ME, Sewall BJ, Tracy B, Albano M, Altieri AH, Altvater L, Bastida-Zavala R, Bortolus A, Brante A, Bravo V, Brown N, Buschmann AH, et al. Predator control of marine communities increases with temperature across 115 degrees of latitude. Science (New York, N.Y.). 376: 1215-1219. PMID 35679394 DOI: 10.1126/science.abc4916  0.429
2022 Gross CP, Duffy JE, Hovel KA, Kardish MR, Reynolds PL, Boström C, Boyer KE, Cusson M, Eklöf J, Engelen AH, Eriksson BK, Fodrie FJ, Griffin JN, Hereu CM, Hori M, et al. The biogeography of community assembly: latitude and predation drive variation in community trait distribution in a guild of epifaunal crustaceans. Proceedings. Biological Sciences. 289: 20211762. PMID 35193403 DOI: 10.1098/rspb.2021.1762  0.817
2021 Lefcheck JS, Edgar GJ, Stuart-Smith RD, Bates AE, Waldock C, Brandl SJ, Kininmonth S, Ling SD, Duffy JE, Rasher DB, Agrawal AF. Publisher Correction: Species richness and identity both determine the biomass of global reef fish communities. Nature Communications. 12: 7361. PMID 34916517 DOI: 10.1038/s41467-021-27681-y  0.836
2021 Lefcheck JS, Edgar GJ, Stuart-Smith RD, Bates AE, Waldock C, Brandl SJ, Kininmonth S, Ling SD, Duffy JE, Rasher DB, Agrawal AF. Species richness and identity both determine the biomass of global reef fish communities. Nature Communications. 12: 6875. PMID 34824244 DOI: 10.1038/s41467-021-27212-9  0.854
2021 de Pablo LX, Lefcheck JS, Harper L, Paul VJ, Jones S, Whippo R, Seemann J, Kline DI, Duffy JE. A doubling of stony coral cover on shallow forereefs at Carrie Bow Cay, Belize from 2014 to 2019. Scientific Reports. 11: 19185. PMID 34584122 DOI: 10.1038/s41598-021-96799-2  0.809
2021 Hovel KA, Duffy JE, Stachowicz JJ, Reynolds P, Boström C, Boyer K, Cimon S, Cusson M, Fodrie FJ, Gagnon K, Hereu CM, Hori M, Jorgensen P, Kruschel C, Lee KS, et al. Joint effects of patch edges and habitat degradation on faunal predation risk in a widespread marine foundation species. Ecology. e03316. PMID 33630346 DOI: 10.1002/ecy.3316  0.732
2020 Whalen MA, Whippo RDB, Stachowicz JJ, York PH, Aiello E, Alcoverro T, Altieri AH, Benedetti-Cecchi L, Bertolini C, Bresch M, Bulleri F, Carnell PE, Cimon S, Connolly RM, Cusson M, ... ... Duffy JE, et al. Climate drives the geography of marine consumption by changing predator communities. Proceedings of the National Academy of Sciences of the United States of America. PMID 33106409 DOI: 10.1073/pnas.2005255117  0.814
2019 Wilkins LGE, Leray M, O'Dea A, Yuen B, Peixoto R, Pereira TJ, Bik HM, Coil DA, Duffy JE, Herre EA, Lessios H, Lucey NM, Mejia LC, Rasher DB, Sharp K, et al. Host-associated microbiomes drive structure and function of marine ecosystems. Plos Biology. 17: e3000533. PMID 31710600 DOI: 10.1371/Journal.Pbio.3000533  0.759
2019 Duffy JE. Reefs need richness. Nature Ecology & Evolution. PMID 30664697 DOI: 10.1038/S41559-018-0784-Z  0.443
2019 Bax NJ, Miloslavich P, Muller-Karger FE, Allain V, Appeltans W, Batten SD, Benedetti-Cecchi L, Buttigieg PL, Chiba S, Costa DP, Duffy JE, Dunn DC, Johnson CR, Kudela RM, Obura D, et al. A Response to Scientific and Societal Needs for Marine Biological Observations Frontiers in Marine Science. 6. DOI: 10.3389/Fmars.2019.00395  0.335
2019 Duffy JE, Benedetti-Cecchi L, Trinanes J, Muller-Karger FE, Ambo-Rappe R, Boström C, Buschmann AH, Byrnes J, Coles RG, Creed J, Cullen-Unsworth LC, Diaz-Pulido G, Duarte CM, Edgar GJ, Fortes M, et al. Toward a Coordinated Global Observing System for Seagrasses and Marine Macroalgae Frontiers in Marine Science. 6. DOI: 10.3389/Fmars.2019.00317  0.657
2019 Topor ZM, Rasher DB, Duffy JE, Brandl SJ. Marine protected areas enhance coral reef functioning by promoting fish biodiversity Conservation Letters. 12: e12638. DOI: 10.1111/Conl.12638  0.805
2019 Duffy JE, Rebelo L, Miloslavich P. Integrating Global Seagrass and Mangrove Ecosystem Observations Eos. 100. DOI: 10.1029/2019Eo136791  0.343
2019 Brandl SJ, Rasher DB, Côté IM, Casey JM, Darling ES, Lefcheck JS, Duffy JE. Coral reef ecosystem functioning: eight core processes and the role of biodiversity Frontiers in Ecology and the Environment. 17: 445-454. DOI: 10.1002/Fee.2088  0.824
2018 Davies T, Cowley A, Bennie J, Leyshon C, Inger R, Carter H, Robinson B, Duffy J, Casalegno S, Lambert G, Gaston K. Popular interest in vertebrates does not reflect extinction risk and is associated with bias in conservation investment. Plos One. 13: e0203694. PMID 30256838 DOI: 10.1371/journal.pone.0203694  0.377
2018 Dornelas M, Antão LH, Moyes F, Bates AE, Magurran AE, Adam D, Akhmetzhanova AA, Appeltans W, Arcos JM, Arnold H, Ayyappan N, Badihi G, Baird AH, Barbosa M, Barreto TE, ... ... Duffy JE, et al. BioTIME: A database of biodiversity time series for the Anthropocene. Global Ecology and Biogeography : a Journal of Macroecology. 27: 760-786. PMID 30147447 DOI: 10.1111/Geb.12729  0.704
2018 Miloslavich P, Bax NJ, Simmons SE, Klein E, Appeltans W, Aburto-Oropeza O, Andersen Garcia M, Batten SD, Benedetti-Cecchi L, Checkley DM, Chiba S, Duffy JE, Dunn DC, Fischer A, Gunn J, et al. Essential ocean variables for global sustained observations of biodiversity and ecosystem changes. Global Change Biology. PMID 29623683 DOI: 10.1111/Gcb.14108  0.418
2018 Bornbusch SL, Lefcheck JS, Duffy JE. Allometry of individual reproduction and defense in eusocial colonies: A comparative approach to trade-offs in social sponge-dwelling Synalpheus shrimps. Plos One. 13: e0193305. PMID 29538466 DOI: 10.1371/Journal.Pone.0193305  0.726
2018 Benson AL, Brooks CM, Canonico G, Duffy JE, Muller-Karger F, Sosik HM, Miloslavich P, Klein E. Integrated Observations and Informatics Improve Understanding of Changing Marine Ecosystems Frontiers in Marine Science. 5. DOI: 10.3389/Fmars.2018.00428  0.394
2018 Bax NJ, Appeltans W, Brainard R, Duffy JE, Dunstan P, Hanich Q, Harden Davies H, Hills J, Miloslavich P, Muller-Karger FE, Simmons S, Aburto-Oropeza O, Batten S, Benedetti-Cecchi L, Checkley D, et al. Linking Capacity Development to GOOS Monitoring Networks to Achieve Sustained Ocean Observation Frontiers in Marine Science. 5. DOI: 10.3389/Fmars.2018.00346  0.323
2018 Muller-Karger FE, Miloslavich P, Bax NJ, Simmons S, Costello MJ, Sousa Pinto I, Canonico G, Turner W, Gill M, Montes E, Best BD, Pearlman J, Halpin P, Dunn D, Benson A, ... ... Duffy JE, et al. Advancing Marine Biological Observations and Data Requirements of the Complementary Essential Ocean Variables (EOVs) and Essential Biodiversity Variables (EBVs) Frameworks Frontiers in Marine Science. 5. DOI: 10.3389/Fmars.2018.00211  0.367
2018 Röhr ME, Holmer M, Baum JK, Björk M, Boyer K, Chin D, Chalifour L, Cimon S, Cusson M, Dahl M, Deyanova D, Duffy JE, Eklöf JS, Geyer JK, Griffin JN, et al. Blue Carbon Storage Capacity of Temperate Eelgrass (Zostera marina) Meadows Global Biogeochemical Cycles. 32: 1457-1475. DOI: 10.1029/2018Gb005941  0.701
2017 Stuart-Smith RD, Edgar GJ, Barrett NS, Bates AE, Baker SC, Bax NJ, Becerro MA, Berkhout J, Blanchard JL, Brock DJ, Clark GF, Cooper AT, Davis TR, Day PB, Duffy JE, et al. Corrigendum: Assessing National Biodiversity Trends for Rocky and Coral Reefs through the Integration of Citizen Science and Scientific Monitoring Programs. Bioscience. 67: 774. PMID 29599543 DOI: 10.1093/biosci/bix070  0.591
2017 Reynolds PL, Stachowicz JJ, Hovel K, Boström C, Boyer K, Cusson M, Eklöf JS, Engel FG, Engelen AH, Eriksson BK, Fodrie FJ, Griffin JN, Hereu C, Hori M, Hanley T, ... ... Duffy JE, et al. Latitude, temperature and habitat complexity predict predation pressure in eelgrass beds across the Northern Hemisphere. Ecology. PMID 29083472 DOI: 10.1002/Ecy.2064  0.827
2017 Edgar GJ, Alexander TJ, Lefcheck JS, Bates AE, Kininmonth SJ, Thomson RJ, Duffy JE, Costello MJ, Stuart-Smith RD. Abundance and local-scale processes contribute to multi-phyla gradients in global marine diversity. Science Advances. 3: e1700419. PMID 29057321 DOI: 10.1126/Sciadv.1700419  0.734
2017 Brooks KC, Maia R, Duffy JE, Hultgren KM, Rubenstein DR. Ecological generalism facilitates the evolution of sociality in snapping shrimps. Ecology Letters. PMID 28980422 DOI: 10.1111/Ele.12857  0.775
2017 Brandl SJ, Casey JM, Knowlton N, Duffy JE. Marine dock pilings foster diverse, native cryptobenthic fish assemblages across bioregions. Ecology and Evolution. 7: 7069-7079. PMID 28904784 DOI: 10.1002/Ece3.3288  0.814
2017 Duffy JE, Godwin CM, Cardinale BJ. Biodiversity effects in the wild are common and as strong as key drivers of productivity. Nature. PMID 28869964 DOI: 10.1038/Nature23886  0.483
2017 Chak STC, Duffy JE, Hultgren KM, Rubenstein DR. Evolutionary transitions towards eusociality in snapping shrimps. Nature Ecology & Evolution. 1: 96. PMID 28812668 DOI: 10.1038/S41559-017-0096  0.813
2017 Gaynor KM, Solomon JW, Siller S, Jessell L, Duffy JE, Rubenstein DR. Development of genome- and transcriptome-derived microsatellites in related species of snapping shrimps with highly duplicated genomes. Molecular Ecology Resources. PMID 28776934 DOI: 10.1111/1755-0998.12705  0.664
2017 Stuart-Smith RD, Edgar GJ, Barrett NS, Bates AE, Baker SC, Bax NJ, Becerro MA, Berkhout J, Blanchard JL, Brock DJ, Clark GF, Cooper AT, Davis TR, Day PB, Duffy JE, et al. Assessing National Biodiversity Trends for Rocky and Coral Reefs through the Integration of Citizen Science and Scientific Monitoring Programs. Bioscience. 67: 134-146. PMID 28596615 DOI: 10.1093/Biosci/Biw180  0.746
2017 Isbell F, Gonzalez A, Loreau M, Cowles J, Díaz S, Hector A, Mace GM, Wardle DA, O'Connor MI, Duffy JE, Turnbull LA, Thompson PL, Larigauderie A. Linking the influence and dependence of people on biodiversity across scales. Nature. 546: 65-72. PMID 28569811 DOI: 10.1038/Nature22899  0.595
2017 Staaterman E, Ogburn M, Altieri A, Brandl S, Whippo R, Seemann J, Goodison M, Duffy J. Bioacoustic measurements complement visual biodiversity surveys: preliminary evidence from four shallow marine habitats Marine Ecology Progress Series. 575: 207-215. DOI: 10.3354/Meps12188  0.776
2017 Ruesink JL, Stachowicz JJ, Reynolds PL, Boström C, Cusson M, Douglass J, Eklöf J, Engelen AH, Hori M, Hovel K, Iken K, Moksnes P, Nakaoka M, O'Connor MI, Olsen JL, ... ... Duffy JE, et al. Form-function relationships in a marine foundation species depend on scale: a shoot to global perspective from a distributed ecological experiment Oikos. 127: 364-374. DOI: 10.1111/Oik.04270  0.81
2017 Campbell JE, Altieri AH, Johnston LN, Kuempel CD, Paperno R, Paul VJ, Duffy JE. Herbivore community determines the magnitude and mechanism of nutrient effects on subtropical and tropical seagrasses Journal of Ecology. 106: 401-412. DOI: 10.1111/1365-2745.12862  0.47
2016 Duffy JE, Lefcheck JS, Stuart-Smith RD, Navarrete SA, Edgar GJ. Biodiversity enhances reef fish biomass and resistance to climate change. Proceedings of the National Academy of Sciences of the United States of America. PMID 27185921 DOI: 10.1073/Pnas.1524465113  0.754
2016 Moore A, Duffy J. Foundation species identity and trophic complexity affect experimental seagrass communities Marine Ecology Progress Series. 556: 105-121. DOI: 10.3354/Meps11785  0.462
2016 Blake RE, Duffy JE. Influence of environmental stressors and grazer immigration on ecosystem properties of an experimental eelgrass community Journal of Experimental Marine Biology and Ecology. 480: 45-53. DOI: 10.1016/J.Jembe.2016.03.007  0.731
2015 Lefcheck JS, Duffy JE. Multitrophic functional diversity predicts ecosystem functioning in experimental assemblages of estuarine consumers. Ecology. 96: 2973-83. PMID 27070016 DOI: 10.1890/14-1977.1  0.758
2015 Chak ST, Rubenstein DR, Duffy JE. Social Control of Reproduction and Breeding Monopolization in the Eusocial Snapping Shrimp Synalpheus elizabethae. The American Naturalist. 186: 660-8. PMID 26655778 DOI: 10.1086/683132  0.755
2015 Duffy JE, Ziegler SL, Campbell JE, Bippus PM, Lefcheck JS. Squidpops: A Simple Tool to Crowdsource a Global Map of Marine Predation Intensity. Plos One. 10: e0142994. PMID 26599815 DOI: 10.1371/Journal.Pone.0142994  0.745
2015 Chak ST, Duffy JE, Rubenstein DR. Reproductive skew drives patterns of sexual dimorphism in sponge-dwelling snapping shrimps. Proceedings. Biological Sciences / the Royal Society. 282: 20150342. PMID 26041357 DOI: 10.1098/Rspb.2015.0342  0.772
2015 Duffy JE, Reynolds PL, Boström C, Coyer JA, Cusson M, Donadi S, Douglass JG, Eklöf JS, Engelen AH, Eriksson BK, Fredriksen S, Gamfeldt L, Gustafsson C, Hoarau G, Hori M, et al. Biodiversity mediates top-down control in eelgrass ecosystems: a global comparative-experimental approach. Ecology Letters. 18: 696-705. PMID 25983129 DOI: 10.1111/Ele.12448  0.808
2015 Lefcheck JS, Byrnes JE, Isbell F, Gamfeldt L, Griffin JN, Eisenhauer N, Hensel MJ, Hector A, Cardinale BJ, Duffy JE. Biodiversity enhances ecosystem multifunctionality across trophic levels and habitats. Nature Communications. 6: 6936. PMID 25907115 DOI: 10.1038/Ncomms7936  0.753
2015 Lefcheck JS, Duffy JE. Multitrophic functional diversity predicts ecosystem functioning in experimental assemblages of estuarine consumers Ecology. 96: 2973-2983. DOI: 10.1890/14-1977.1.sm  0.65
2015 Gamfeldt L, Lefcheck JS, Byrnes JEK, Cardinale BJ, Duffy JE, Griffin JN. Marine biodiversity and ecosystem functioning: What's known and what's next? Oikos. 124: 252-265. DOI: 10.1111/Oik.01549  0.774
2014 Reynolds PL, Richardson JP, Duffy JE. Field experimental evidence that grazers mediate transition between microalgal and seagrass dominance Limnology and Oceanography. 59: 1053-1064. DOI: 10.4319/Lo.2014.59.3.1053  0.658
2014 Lefcheck JS, Buchheister A, Laumann KM, Stratton MA, Sobocinski KL, Chak STC, Clardy TR, Reynolds PL, Latour RJ, Duffy JE. Dimensions of biodiversity in Chesapeake Bay demersal fishes: Patterns and drivers through space and time Ecosphere. 5. DOI: 10.1890/Es13-00284.1  0.849
2014 Lefcheck JS, van Montfrans J, Orth RJ, Schmitt EL, Duffy JE, Luckenbach MW. Epifaunal invertebrates as predators of juvenile bay scallops (Argopecten irradians) Journal of Experimental Marine Biology and Ecology. 454: 18-25. DOI: 10.1016/J.Jembe.2014.01.014  0.769
2014 Blake RE, Duffy JE, Richardson JP. Patterns of seagrass community response to local shoreline development Estuaries and Coasts. 37: 1549-1561. DOI: 10.1007/S12237-014-9784-7  0.707
2013 Stuart-Smith RD, Bates AE, Lefcheck JS, Duffy JE, Baker SC, Thomson RJ, Stuart-Smith JF, Hill NA, Kininmonth SJ, Airoldi L, Becerro MA, Campbell SJ, Dawson TP, Navarrete SA, Soler GA, et al. Integrating abundance and functional traits reveals new global hotspots of fish diversity. Nature. 501: 539-42. PMID 24067714 DOI: 10.1038/Nature12529  0.782
2013 Whalen MA, Duffy JE, Grace JB. Temporal shifts in top-down vs. bottom-up control of epiphytic algae in a seagrass ecosystem. Ecology. 94: 510-20. PMID 23691669 DOI: 10.1890/12-0156.1  0.739
2013 Lefcheck JS, Whalen MA, Davenport TM, Stone JP, Duffy JE. Physiological effects of diet mixing on consumer fitness: a meta-analysis. Ecology. 94: 565-72. PMID 23687882 DOI: 10.1890/12-0192.1  0.791
2013 Duffy JE, Macdonald KS, Hultgren KM, Chak TC, Rubenstein DR. Decline and local extinction of Caribbean eusocial shrimp. Plos One. 8: e54637. PMID 23418429 DOI: 10.1371/Journal.Pone.0054637  0.839
2013 Staudinger MD, Carter SL, Cross MS, Dubois NS, Duffy JE, Enquist C, Griffis R, Hellmann JJ, Lawler JJ, O'Leary J, Morrison SA, Sneddon L, Stein BA, Thompson LM, Turner W. Biodiversity in a changing climate: A synthesis of current and projected trends in the US Frontiers in Ecology and the Environment. 11: 465-473. DOI: 10.1890/120272  0.453
2013 Duffy JE, Amaral-Zettler LA, Fautin DG, Paulay G, Rynearson TA, Sosik HM, Stachowicz JJ. Envisioning a marine biodiversity observation network Bioscience. 63: 350-361. DOI: 10.1525/Bio.2013.63.5.8  0.648
2013 Ruckelshaus M, Doney SC, Galindo HM, Barry JP, Chan F, Duffy JE, English CA, Gaines SD, Grebmeier JM, Hollowed AB, Knowlton N, Polovina J, Rabalais NN, Sydeman WJ, Talley LD. Securing ocean benefits for society in the face of climate change Marine Policy. 40: 154-159. DOI: 10.1016/J.Marpol.2013.01.009  0.54
2012 Naeem S, Duffy JE, Zavaleta E. The functions of biological diversity in an age of extinction. Science (New York, N.Y.). 336: 1401-6. PMID 22700920 DOI: 10.1126/Science.1215855  0.417
2012 Hooper DU, Adair EC, Cardinale BJ, Byrnes JE, Hungate BA, Matulich KL, Gonzalez A, Duffy JE, Gamfeldt L, O'Connor MI. A global synthesis reveals biodiversity loss as a major driver of ecosystem change. Nature. 486: 105-8. PMID 22678289 DOI: 10.1038/Nature11118  0.505
2012 Cardinale BJ, Duffy JE, Gonzalez A, Hooper DU, Perrings C, Venail P, Narwani A, Mace GM, Tilman D, Wardle DA, Kinzig AP, Daily GC, Loreau M, Grace JB, Larigauderie A, et al. Biodiversity loss and its impact on humanity. Nature. 486: 59-67. PMID 22678280 DOI: 10.1038/Nature11148  0.585
2012 Poore AG, Campbell AH, Coleman RA, Edgar GJ, Jormalainen V, Reynolds PL, Sotka EE, Stachowicz JJ, Taylor RB, Vanderklift MA, Duffy JE. Global patterns in the impact of marine herbivores on benthic primary producers. Ecology Letters. 15: 912-22. PMID 22639820 DOI: 10.1111/J.1461-0248.2012.01804.X  0.831
2012 Hultgren KM, Duffy JE. Phylogenetic community ecology and the role of social dominance in sponge-dwelling shrimp. Ecology Letters. 15: 704-13. PMID 22548770 DOI: 10.1111/J.1461-0248.2012.01788.X  0.748
2012 Doney SC, Ruckelshaus M, Duffy JE, Barry JP, Chan F, English CA, Galindo HM, Grebmeier JM, Hollowed AB, Knowlton N, Polovina J, Rabalais NN, Sydeman WJ, Talley LD. Climate change impacts on marine ecosystems. Annual Review of Marine Science. 4: 11-37. PMID 22457967 DOI: 10.1146/Annurev-Marine-041911-111611  0.678
2012 Blake RE, Duffy JE. Changes in biodiversity and environmental stressors influence community structure of an experimental eelgrass Zostera marina system Marine Ecology Progress Series. 470: 41-54. DOI: 10.3354/Meps10006  0.725
2012 Cardinale BJ, Duffy JE, Gonzalez A, Hooper DU, Perrings C, Venail P, Narwani A, Mace GM, Tilman D, A.Wardle D, Kinzig AP, Daily GC, Loreau M, Grace JB, Larigauderie A, et al. Erratum: Corrigendum: Biodiversity loss and its impact on humanity Nature. 489: 326-326. DOI: 10.1038/Nature11373  0.5
2011 Long ZT, Bruno JF, Duffy JE. Food chain length and omnivory determine the stability of a marine subtidal food web. The Journal of Animal Ecology. 80: 586-94. PMID 21250990 DOI: 10.1111/J.1365-2656.2010.01800.X  0.784
2011 Wu X, Duffy JE, Reich PB, Sun S. A brown-world cascade in the dung decomposer food web of an alpine meadow: Effects of predator interactions and warming Ecological Monographs. 81: 313-328. DOI: 10.1890/10-0808.1  0.501
2011 Hultgren KM, Duffy JE. Multi-locus phylogeny of sponge-dwelling snapping shrimp (Caridea: Alpheidae: Synalpheus) supports morphology-based species concepts Journal of Crustacean Biology. 31: 352-360. DOI: 10.1651/10-3382.1  0.743
2011 Hultgren KM, MacDonald KS, Duffy JE. Sponge-dwelling snapping shrimps (Alpheidae: Synalpheus) of Barbados West Indies, with a description of a new eusocial species Zootaxa. 1-16. DOI: 10.11646/Zootaxa.2834.1.1  0.825
2010 Duffy JE, Macdonald KS. Kin structure, ecology and the evolution of social organization in shrimp: a comparative analysis. Proceedings. Biological Sciences / the Royal Society. 277: 575-84. PMID 19889706 DOI: 10.1098/Rspb.2009.1483  0.802
2010 Douglass JG, France KE, Richardson JP, Duffy JE. Seasonal and interannual change in a Chesapeake Bay eelgrass community: Insights into biotic and abiotic control of community structure Limnology and Oceanography. 55: 1499-1520. DOI: 10.4319/Lo.2010.55.4.1499  0.783
2010 Hultgren KM, Duffy JE. Sponge host characteristics shape the community structure of their shrimp associates Marine Ecology Progress Series. 407: 1-12. DOI: 10.3354/Meps08609  0.749
2010 Duffy JE. Biodiversity effects: Trends and exceptions - A reply to Wardle and Jonsson Frontiers in Ecology and the Environment. 8: 11-12. DOI: 10.1890/10.Wb.003  0.35
2010 Hultgren KM, MacDonald KS, Duffy JE. Sponge-dwelling snapping shrimps of Curaçao, with descriptions of three new species Zootaxa. 221-262. DOI: 10.11646/Zootaxa.2372.1.20  0.822
2010 Blake RE, Duffy JE. Grazer diversity affects resistance to multiple stressors in an experimental seagrass ecosystem Oikos. 119: 1625-1635. DOI: 10.1111/J.1600-0706.2010.18419.X  0.744
2009 Spivak AC, Canuel EA, Duffy JE, Richardson JP. Nutrient enrichment and food web composition affect ecosystem metabolism in an experimental seagrass habitat. Plos One. 4: e7473. PMID 19829713 DOI: 10.1371/Journal.Pone.0007473  0.48
2009 Srivastava DS, Cardinale BJ, Downing AL, Duffy JE, Jouseau C, Sankaran M, Wright JP. Diversity has stronger top-down than bottom-up effects on decomposition. Ecology. 90: 1073-83. PMID 19449701 DOI: 10.1890/08-0439.1  0.456
2009 Spivak AC, Canuel EA, Duffy JE, Douglass JG, Richardson JP. Epifaunal community composition and nutrient addition alter sediment organic matter composition in a natural eelgrass Zostera marina bed: A field experiment Marine Ecology Progress Series. 376: 55-67. DOI: 10.3354/Meps07813  0.766
2009 Cardinale BJ, Srivastava DS, Duffy JE, Wright JP, Downing AL, Sankaran M, Jouseau C, Cadotte MW, Carroll IT, Weis JJ, Hector A, Loreau M. Effects of biodiversity on the functioning of ecosystems: a summary of 164 experimental manipulations of species richness Ecology. 90: 854-854. DOI: 10.1890/08-1584.1  0.669
2009 Duffy JE. Why biodiversity is important to the functioning of real-world ecosystems Frontiers in Ecology and the Environment. 7: 437-444. DOI: 10.1890/070195  0.438
2009 MacDonald KS, Hultgren K, Duffy JE. The sponge-dwelling snapping shrimps (Crustacea, Decapoda, Alpheidae, Synalpheus) of discovery bay, Jamaica, with descriptions of four new species Zootaxa. 1-57. DOI: 10.11646/Zootaxa.2199.1.1  0.794
2008 Rubenstein DR, McCleery BV, Duffy JE. Microsatellite development suggests evidence of polyploidy in the social sponge-dwelling snapping shrimp Zuzalpheus brooksi. Molecular Ecology Resources. 8: 890-4. PMID 21585921 DOI: 10.1111/J.1755-0998.2008.02100.X  0.541
2008 Bruno JF, Boyer KE, Duffy JE, Lee SC. Relative and interactive effects of plant and grazer richness in a benthic marine community. Ecology. 89: 2518-28. PMID 18831173 DOI: 10.1890/07-1345.1  0.689
2008 Douglass JG, Duffy JE, Bruno JF, Gilchrist GW. Correction of statistical miscalculation slightly alters conclusions about diversity effects for Douglass et al. (2008). Ecology Letters. 11: E9-10. PMID 18657171 DOI: 10.1111/J.1461-0248.2008.01227.X  0.763
2008 Douglass JG, Duffy JE, Bruno JF. Herbivore and predator diversity interactively affect ecosystem properties in an experimental marine community. Ecology Letters. 11: 598-608. PMID 18371090 DOI: 10.1111/J.1461-0248.2008.01175.X  0.832
2008 Tóth E, Duffy JE. Influence of sociality on allometric growth and morphological differentiation in sponge-dwelling alpheid shrimp Biological Journal of the Linnean Society. 94: 527-540. DOI: 10.1111/J.1095-8312.2008.01013.X  0.45
2007 Long ZT, Bruno JF, Duffy JE. Biodiversity mediates productivity through different mechanisms at adjacent trophic levels. Ecology. 88: 2821-9. PMID 18051651 DOI: 10.1890/06-1977.1  0.817
2007 Duffy JE, Cardinale BJ, France KE, McIntyre PB, Thébault E, Loreau M. The functional role of biodiversity in ecosystems: incorporating trophic complexity. Ecology Letters. 10: 522-38. PMID 17498151 DOI: 10.1111/J.1461-0248.2007.01037.X  0.832
2007 Spivak AC, Canuel EA, Duffy JE, Richardson JP. Top-down and bottom-up controls on sediment organic matter composition in an experimental seagrass ecosystem Limnology and Oceanography. 52: 2595-2607. DOI: 10.4319/Lo.2007.52.6.2595  0.453
2007 Canuel EA, Spivak AC, Waterson EJ, Duffy JE. Biodiversity and food web structure influence short-term accumulation of sediment organic matter in an experimental seagrass system Limnology and Oceanography. 52: 590-602. DOI: 10.4319/Lo.2007.52.2.0590  0.399
2007 Douglass JG, Duffy JE, Spivak AC, Richardson JP. Nutrient versus consumer control of community structure in a Chesapeake Bay eelgrass habitat Marine Ecology Progress Series. 348: 71-83. DOI: 10.3354/Meps07091  0.767
2007 Ríos R, Duffy JE. A review of the sponge-dwelling snapping shrimp from Carrie Bow Cay, Belize, with description of Zuzalpheus, new genus, and six new species (Crustacea: Decapoda: Alpheidae) Zootaxa. 1-94. DOI: 10.11646/Zootaxa.1602.1.1  0.446
2007 Stachowicz JJ, Bruno JF, Duffy JE. Understanding the effects of marine biodiversity on communities and ecosystems Annual Review of Ecology, Evolution, and Systematics. 38: 739-766. DOI: 10.1146/Annurev.Ecolsys.38.091206.095659  0.799
2007 Worm B, Barbier EB, Beaumont N, Duffy JE, Folke C, Halpern BS, Jackson JBC, Lotze HK, Micheli F, Palumbi SR, Sala E, Selkoe KA, Stachowicz JJ, Watson R. Response to Comments on "Impacts of Biodiversity Loss on Ocean Ecosystem Services" Science. 316: 1285d-1285d. DOI: 10.1126/Science.1138466  0.638
2007 Worm B, Barbier EB, Beaumont N, Duffy JE, Folke C, Halpern BS, Jackson JBC, Lotze HK, Micheli F, Palumbi SR, Sala E, Selkoe KA, Stachowicz JJ, Watson R. Response [4] Science. 316: 1282-1284.  0.464
2006 Worm B, Barbier EB, Beaumont N, Duffy JE, Folke C, Halpern BS, Jackson JB, Lotze HK, Micheli F, Palumbi SR, Sala E, Selkoe KA, Stachowicz JJ, Watson R. Impacts of biodiversity loss on ocean ecosystem services. Science (New York, N.Y.). 314: 787-90. PMID 17082450 DOI: 10.1126/Science.1132294  0.658
2006 Cardinale BJ, Srivastava DS, Duffy JE, Wright JP, Downing AL, Sankaran M, Jouseau C. Effects of biodiversity on the functioning of trophic groups and ecosystems. Nature. 443: 989-92. PMID 17066035 DOI: 10.1038/Nature05202  0.567
2006 France KE, Duffy JE. Diversity and dispersal interactively affect predictability of ecosystem function. Nature. 441: 1139-43. PMID 16810254 DOI: 10.1038/Nature04729  0.837
2006 Duffy JE. Biodiversity and the functioning of seagrass ecosystems Marine Ecology Progress Series. 311: 233-250. DOI: 10.3354/Meps311233  0.55
2006 Duffy JE, Stachowicz JJ. Why biodiversity is important to oceanography: Potential roles of genetic, species, and trophic diversity in pelagic ecosystem processes Marine Ecology Progress Series. 311: 179-189. DOI: 10.3354/Meps311179  0.716
2006 Macdonald KS, Duffy JE. Two new species of sponge-dwelling snapping shrimp from the Belizean Barrier Reef, with a synopsis of the Synalpheus brooksi species complex American Museum Novitates. 1-22. DOI: 10.1206/0003-0082(2006)3543[1:Tnsoss]2.0.Co;2  0.791
2006 Macdonald KS, Ríos R, Duffy JE. Biodiversity, host specificity, and dominance by eusocial species among sponge-dwelling alpheid shrimp on the Belize Barrier Reef Diversity and Distributions. 12: 165-178. DOI: 10.1111/J.1366-9516.2005.00213.X  0.808
2005 Bruno JF, Boyer KE, Duffy JE, Lee SC, Kertesz JS. Effects of macroalgal species identity and richness on primary production in benthic marine communities. Ecology Letters. 8: 1165-74. PMID 21352440 DOI: 10.1111/J.1461-0248.2005.00823.X  0.659
2005 MacDonald KS, Yampolsky L, Duffy JE. Molecular and morphological evolution of the amphipod radiation of Lake Baikal. Molecular Phylogenetics and Evolution. 35: 323-43. PMID 15804407 DOI: 10.1016/J.Ympev.2005.01.013  0.76
2005 Duffy JE, Richardson JP, France KE. Ecosystem consequences of diversity depend on food chain length in estuarine vegetation Ecology Letters. 8: 301-309. DOI: 10.1111/J.1461-0248.2005.00725.X  0.507
2004 Morrison CL, Rios R, Duffy JE. Phylogenetic evidence for an ancient rapid radiation of Caribbean sponge-dwelling snapping shrimps (Synalpheus). Molecular Phylogenetics and Evolution. 30: 563-81. PMID 15012939 DOI: 10.1016/S1055-7903(03)00252-5  0.425
2004 Rhode JM, Duffy JE. Relationships between bed age, bed size, and genetic structure in Chesapeake Bay (Virginia, USA) eelgrass (Zostera marina L.) Conservation Genetics. 5: 661-671. DOI: 10.1007/S10592-004-1856-Y  0.769
2003 Duffy JE. Biodiversity loss, trophic skew and ecosystem functioning Ecology Letters. 6: 680-687. DOI: 10.1046/J.1461-0248.2003.00494.X  0.466
2003 Duffy JE, Richardson JP, Canuel EA. Grazer diversity effects on ecosystem functioning in seagrass beds Ecology Letters. 6: 637-645. DOI: 10.1046/J.1461-0248.2003.00474.X  0.502
2003 Worm B, Duffy JE. Biodiversity, productivity and stability in real food webs Trends in Ecology and Evolution. 18: 628-632. DOI: 10.1016/J.Tree.2003.09.003  0.449
2002 Duffy JE. Biodiversity and ecosystem function: The consumer connection Oikos. 99: 201-219. DOI: 10.1034/J.1600-0706.2002.990201.X  0.531
2002 Duffy JE, Morrison CL, Macdonald KS. Colony defense and behavioral differentiation in the eusocial shrimp Synalpheus regalis Behavioral Ecology and Sociobiology. 51: 488-495. DOI: 10.1007/S00265-002-0455-5  0.734
2001 Sagasti A, Schaffner LC, Duffy JE. Effects of periodic hypoxia on mortality, feeding and predation in an estuarine epifaunal community. Journal of Experimental Marine Biology and Ecology. 258: 257-283. PMID 11278013 DOI: 10.1016/S0022-0981(01)00220-9  0.443
2001 Parker JD, Duffy JE, Orth RJ. Plant species diversity and composition: Experimental effects on marine epifaunal assemblages Marine Ecology Progress Series. 224: 55-67. DOI: 10.3354/Meps224055  0.705
2001 Duffy JE, Harvilicz AM. Species-specific impacts of grazing amphipods in an eelgrass-bed community Marine Ecology Progress Series. 223: 201-211. DOI: 10.3354/Meps223201  0.501
2001 Duffy JE, Hemminga MA, Duarte CM. The Meadows of the Sea@@@Seagrass Ecology Ecology. 82: 2969. DOI: 10.2307/2679976  0.422
2001 Duffy JE, Macdonald KS, Rhode JM, Parker JD. Grazer diversity, functional redundancy, and productivity in seagrass beds: An experimental test Ecology. 82: 2417-2434. DOI: 10.1890/0012-9658(2001)082[2417:Gdfrap]2.0.Co;2  0.84
2000 Duffy JE, Morrison CL, Ríos R. Multiple origins of eusociality among sponge-dwelling shrimps (Synalpheus). Evolution; International Journal of Organic Evolution. 54: 503-16. PMID 10937227 DOI: 10.1111/J.0014-3820.2000.Tb00053.X  0.441
2000 Sagasti A, Schaffner LC, Duffy JE. Epifaunal communities thrive in an estuary with hypoxic episodes Estuaries. 23: 474-487. DOI: 10.2307/1353140  0.484
2000 Duffy JE, Hay ME. Strong impacts of grazing amphipods on the organization of a benthic community Ecological Monographs. 70: 237-263. DOI: 10.1890/0012-9615(2000)070[0237:Siogao]2.0.Co;2  0.673
1999 Duffy JE, Macdonald KS. Colony structure of the social snapping shrimp Synalpheus filidigitus in Belize Journal of Crustacean Biology. 19: 283-292. DOI: 10.1163/193724099X00097  0.755
1996 Duffy JE. Synalpheus regalis, new species, a sponge-dwelling shrimp from the belize barrier reef, with comments on host specificity in Synalpheus Journal of Crustacean Biology. 16: 564-573. DOI: 10.1163/193724096X00603  0.478
1996 Duffy JE. Resource-associated population subdivision in a symbiotic coral-reef shrimp Evolution. 50: 360-373. DOI: 10.1111/J.1558-5646.1996.Tb04499.X  0.412
1996 Duffy JE. Species boundaries, specialization, and the radiation of sponge- dwelling alpheid shrimp Biological Journal of the Linnean Society. 58: 307-324. DOI: 10.1111/J.1095-8312.1996.Tb01437.X  0.494
1996 Duffy JE. Eusociality in a coral-reef shrimp Nature. 381: 512-514. DOI: 10.1038/381512A0  0.33
1994 Duffy JE, Hay ME. Herbivore Resistance to Seaweed Chemical Defense: The Roles of Mobility and Predation Risk Ecology. 75: 1304-1319. DOI: 10.2307/1937456  0.609
1991 Duffy JE, Hay ME. Food and Shelter as Determinants of Food Choice by an Herbivorous Marine Amphipod Ecology. 72: 1286-1298. DOI: 10.2307/1941102  0.627
1991 Duffy JE, Hay ME. Amphipods Are Not All Created Equal: A Reply to Bell Ecology. 72: 354-358. DOI: 10.2307/1938930  0.5
1990 Duffy JE. Amphipods on seaweeds: partners or pests? Oecologia. 83: 267-76. PMID 22160123 DOI: 10.1007/Bf00317764  0.453
1990 Hay ME, Duffy JE, Fenical W. Host‐Plant Specialization Decreases Predation on a Marine Amphipod: An Herbivore in Plant's Clothing Ecology. 71: 733-743. DOI: 10.2307/1940326  0.67
1990 Duffy JE, Hay ME. Seaweed Adaptations to Herbivory Bioscience. 40: 368-375. DOI: 10.2307/1311214  0.58
1989 Hay ME, Pawlik JR, Duffy JE, Fenical W. Seaweed-herbivore-predator interactions: host-plant specialization reduces predation on small herbivores. Oecologia. 81: 418-427. PMID 28311198 DOI: 10.1007/Bf00377093  0.629
1989 Hay ME, Pawlik JR, Duffy JE, Fenical W. Seaweed-herbivore-predator interactions: host-plant specialization reduces predation on small herbivores Oecologia. 81: 418-427. DOI: 10.1007/BF00377093  0.503
1988 Paul VJ, Hay ME, Duffy JE, Fenical W, Gustafson K. Chemical defense in the seaweed Ochtodes secundiramea (Montagne) Howe (Rhodophyta): effects of its monoterpenoid components upon diverse coral-reef herbivores Journal of Experimental Marine Biology and Ecology. 114: 249-260. DOI: 10.1016/0022-0981(88)90141-4  0.6
1987 Hay ME, Duffy JE, Pfister CA, Fenical W. Chemical Defense Against Different Marine Herbivores: Are Amphipods Insect Equivalents? Ecology. 68: 1567-1580. PMID 29357161 DOI: 10.2307/1939849  0.662
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