Brendan Jeffrey, Ph.D. - Publications

Affiliations: 
2011 Oregon State University, Corvallis, OR 
Area:
Microbiology Biology, Genetics, Bioinformatics Biology

19 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Marin MG, Wippel C, Quinones-Olvera N, Behruznia M, Jeffrey BM, Harris M, Mann BC, Rosenthal A, Jacobson KR, Warren RM, Li H, Meehan CJ, Farhat MR. Analysis of the limited accessory genome reveals potential pitfalls of pan-genome analysis approaches. Biorxiv : the Preprint Server For Biology. PMID 38585972 DOI: 10.1101/2024.03.21.586149  0.323
2023 Rao M, Wollenberg K, Harris M, Kulavalli S, Thomas L, Chawla K, Shenoy VP, Varma M, Saravu K, Hande HM, Shanthigrama Vasudeva CS, Jeffrey B, Gabrielian A, Rosenthal A. Lineage classification and antitubercular drug resistance surveillance of by whole-genome sequencing in Southern India. Microbiology Spectrum. e0453122. PMID 37671895 DOI: 10.1128/spectrum.04531-22  0.37
2022 Ferreira TR, Inbar E, Shaik J, Jeffrey BM, Ghosh K, Dobson DE, Beverley SM, Sacks D. Self-Hybridization in Leishmania major. Mbio. e0285822. PMID 36394334 DOI: 10.1128/mbio.02858-22  0.302
2017 Beare PA, Jeffrey BM, Martens CA, Pearson T, Heinzen RA. Draft Genome Sequences of Historical Strains of Coxiella burnetii Isolated from Cow's Milk and a Goat Placenta. Genome Announcements. 5. PMID 28963210 DOI: 10.1128/Genomea.00985-17  0.363
2017 Beare PA, Jeffrey BM, Martens CA, Heinzen RA. Draft Genome Sequences of the Avirulent Coxiella burnetii Dugway 7D77-80 and Dugway 7E65-68 Strains Isolated from Rodents in Dugway, Utah. Genome Announcements. 5. PMID 28963209 DOI: 10.1128/genomeA.00984-17  0.399
2017 Beare PA, Jeffrey BM, Martens CA, Heinzen RA. Draft Genome Sequences of the Avirulent Coxiella burnetii Dugway 7D77-80 and Dugway 7E65-68 Strains Isolated from Rodents in Dugway, Utah. Genome Announcements. 5. PMID 28963209 DOI: 10.1128/genomeA.00984-17  0.399
2017 Beare PA, Jeffrey BM, Martens CA, Heinzen RA. Draft Genome Sequences of Three Coxiella burnetii Strains Isolated from Q Fever Patients. Genome Announcements. 5. PMID 28935742 DOI: 10.1128/genomeA.00986-17  0.325
2017 Jeffrey B, Rose SJ, Gilbert K, Lewis M, Bermudez LE. Comparative analysis of the genomes of clinical isolates of Mycobacterium avium subsp. hominissuis regarding virulence-related genes. Journal of Medical Microbiology. PMID 28671535 DOI: 10.1099/Jmm.0.000507  0.37
2016 Zhao M, Gilbert K, Danelishvili L, Jeffrey B, Bermudez LE. Identification of Prophages within the 104 Genome and the Link of Their Function Regarding to Environment Survival. Advances in Microbiology. 6: 927-941. PMID 34295573 DOI: 10.4236/aim.2016.613087  0.339
2016 Zhao M, Gilbert K, Danelishvili L, Jeffrey B, Bermudez LE. Identification of Prophages within the 104 Genome and the Link of Their Function Regarding to Environment Survival. Advances in Microbiology. 6: 927-941. PMID 34295573 DOI: 10.4236/aim.2016.613087  0.339
2016 Zhao M, Gilbert K, Danelishvili L, Jeffrey B, Bermudez LE. Identification of Prophages within the <i>Mycobacterium avium</i> 104 Genome and the Link of Their Function Regarding to Environment Survival Advances in Microbiology. 6: 927-941. DOI: 10.4236/Aim.2016.613087  0.388
2013 Jeffrey BM, Suchland RJ, Eriksen SG, Sandoz KM, Rockey DD. Genomic and phenotypic characterization of in vitro-generated Chlamydia trachomatis recombinants. Bmc Microbiology. 13: 142. PMID 23786423 DOI: 10.1186/1471-2180-13-142  0.663
2012 Babra B, Watson G, Xu W, Jeffrey BM, Xu JR, Rockey DD, Rohrmann GF, Jin L. Analysis of the genome of leporid herpesvirus 4. Virology. 433: 183-91. PMID 22921533 DOI: 10.1016/J.Virol.2012.08.002  0.628
2012 Giacani L, Chattopadhyay S, Centurion-Lara A, Jeffrey BM, Le HT, Molini BJ, Lukehart SA, Sokurenko EV, Rockey DD. Footprint of positive selection in Treponema pallidum subsp. pallidum genome sequences suggests adaptive microevolution of the syphilis pathogen. Plos Neglected Tropical Diseases. 6: e1698. PMID 22720110 DOI: 10.1371/Journal.Pntd.0001698  0.669
2012 Sandoz KM, Eriksen SG, Jeffrey BM, Suchland RJ, Putman TE, Hruby DE, Jordan R, Rockey DD. Resistance to a novel antichlamydial compound is mediated through mutations in Chlamydia trachomatis secY. Antimicrobial Agents and Chemotherapy. 56: 4296-302. PMID 22644029 DOI: 10.1128/Aac.00356-12  0.639
2010 Giacani L, Jeffrey BM, Molini BJ, Le HT, Lukehart SA, Centurion-Lara A, Rockey DD. Complete genome sequence and annotation of the Treponema pallidum subsp. pallidum Chicago strain. Journal of Bacteriology. 192: 2645-6. PMID 20348263 DOI: 10.1128/Jb.00159-10  0.64
2010 Jeffrey BM, Suchland RJ, Quinn KL, Davidson JR, Stamm WE, Rockey DD. Genome sequencing of recent clinical Chlamydia trachomatis strains identifies loci associated with tissue tropism and regions of apparent recombination. Infection and Immunity. 78: 2544-53. PMID 20308297 DOI: 10.1128/Iai.01324-09  0.646
2009 Suchland RJ, Sandoz KM, Jeffrey BM, Stamm WE, Rockey DD. Horizontal transfer of tetracycline resistance among Chlamydia spp. in vitro. Antimicrobial Agents and Chemotherapy. 53: 4604-11. PMID 19687238 DOI: 10.1128/Aac.00477-09  0.654
2008 Suchland RJ, Jeffrey BM, Xia M, Bhatia A, Chu HG, Rockey DD, Stamm WE. Identification of concomitant infection with Chlamydia trachomatis IncA-negative mutant and wild-type strains by genomic, transcriptional, and biological characterizations. Infection and Immunity. 76: 5438-46. PMID 18852248 DOI: 10.1128/Iai.00984-08  0.657
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