| Year |
Citation |
Score |
| 2022 |
Angarita Barajas BK, Cantet RJC, Steibel JP, Schrauf MF, Forneris NS. Heritability estimates and predictive ability for pig meat quality traits using identity-by-state and identity-by-descent relationships in an F population. Journal of Animal Breeding and Genetics = Zeitschrift Fur Tierzuchtung Und Zuchtungsbiologie. PMID 36300585 DOI: 10.1111/jbg.12742 |
0.342 |
|
| 2021 |
Misztal I, Aguilar I, Lourenco D, Ma L, Steibel J, Toro M. Emerging issues in genomic selection. Journal of Animal Science. PMID 33773494 DOI: 10.1093/jas/skab092 |
0.379 |
|
| 2020 |
Funkhouser SA, Vazquez AI, Steibel JP, Ernst CW, de Los Campos G. Deciphering Sex-Specific Genetic Architectures Using Local Bayesian Regressions. Genetics. PMID 32198180 DOI: 10.1534/Genetics.120.303120 |
0.44 |
|
| 2019 |
Wurtz K, Camerlink I, D'Eath RB, Fernández AP, Norton T, Steibel J, Siegford J. Recording behaviour of indoor-housed farm animals automatically using machine vision technology: A systematic review. Plos One. 14: e0226669. PMID 31869364 DOI: 10.1371/Journal.Pone.0226669 |
0.316 |
|
| 2019 |
Angarita Barajas BK, Cantet RJC, Wurtz KE, O'Malley CI, Siegford JM, Ernst CW, Turner SP, Steibel JP. Estimation of indirect social genetic effects for skin lesion count in group-housed pigs by quantifying behavioral interactions. Journal of Animal Science. PMID 31373628 DOI: 10.1093/Jas/Skz244 |
0.331 |
|
| 2019 |
Velez-Irizarry D, Casiro S, Daza KR, Bates RO, Raney NE, Steibel JP, Ernst CW. Genetic control of longissimus dorsi muscle gene expression variation and joint analysis with phenotypic quantitative trait loci in pigs. Bmc Genomics. 20: 3. PMID 30606113 DOI: 10.1186/S12864-018-5386-2 |
0.404 |
|
| 2019 |
Barajas BKA, Cantet R, Wurtz KE, O’Malley C, Siegford J, Ernst C, Steibel JP. 62 Improved estimation of indirect social genetic effects in group-housed pigs by quantifying behavioral interactions Journal of Animal Science. 97: 34-34. DOI: 10.1093/Jas/Skz122.063 |
0.351 |
|
| 2019 |
Velez-Irizary D, Casiro S, Daza KR, Bates RO, Raney NE, Steibel JP, Ernst C. 33 Young Scholar Presentation: Expression quantitative trait loci and allele-specific expression exhibiting joint association with polygenic trait phenotypes in pigs Journal of Animal Science. 97: 19-19. DOI: 10.1093/Jas/Skz122.035 |
0.447 |
|
| 2019 |
O’Malley CI, Turner SP, D’Eath RB, Steibel JP, Bates RO, Ernst CW, Siegford JM. Animal personality in the management and welfare of pigs Applied Animal Behaviour Science. 218: 104821. DOI: 10.1016/J.Applanim.2019.06.002 |
0.322 |
|
| 2018 |
Bernal Rubio YL, González Reymúndez A, Wu KH, Griguer CE, Steibel JP, de Los Campos G, Doseff A, Gallo K, Vazquez AI. Whole-Genome Multi-omic Study of Survival in Patients with Glioblastoma Multiforme. G3 (Bethesda, Md.). PMID 30228192 DOI: 10.1534/G3.118.200391 |
0.351 |
|
| 2018 |
Wurtz KE, Siegford JM, Ernst CW, Raney NE, Bates RO, Steibel JP. Genome-wide association analyses of lesion counts in group-housed pigs. Animal Genetics. 49: 628-631. PMID 30132933 DOI: 10.1111/Age.12713 |
0.444 |
|
| 2018 |
Nawaz MY, Jimenez-Krassel F, Steibel JP, Lu Y, Baktula A, Vukasinovic N, Neuder L, Ireland JLH, Ireland JJ, Tempelman RJ. Genomic heritability and genome-wide association analysis of anti-Müllerian hormone in Holstein dairy heifers. Journal of Dairy Science. PMID 30007805 DOI: 10.3168/Jds.2018-14798 |
0.672 |
|
| 2017 |
Funkhouser SA, Bates RO, Ernst CW, Newcom D, Steibel JP. Estimation of genome-wide and locus-specific breed composition in pigs. Translational Animal Science. 1: 36-44. PMID 32704628 DOI: 10.2527/tas2016.0003 |
0.34 |
|
| 2017 |
Wurtz KE, Siegford JM, Bates RO, Ernst CW, Steibel JP. Estimation of genetic parameters for lesion scores and growth traits in group-housed pigs. Journal of Animal Science. 95: 4310-4317. PMID 29108070 DOI: 10.2527/Jas2017.1757 |
0.309 |
|
| 2017 |
Chen C, Steibel JP, Tempelman RJ. Genome Wide Association Analyses Based on Broadly Different Specifications for Prior Distributions, Genomic Windows, and Estimation Methods. Genetics. PMID 28637709 DOI: 10.1534/Genetics.117.202259 |
0.677 |
|
| 2017 |
Casiró S, Velez-Irizarry D, Ernst CW, Raney NE, Bates RO, Charles MG, Steibel JP. Genome-wide association study in an F2 Duroc x Pietrain resource population for economically important meat quality and carcass traits. Journal of Animal Science. 95: 545-558. PMID 28380601 DOI: 10.2527/Jas2016.1003 |
0.463 |
|
| 2017 |
García-Baccino CA, Munilla S, Legarra A, Vitezica ZG, Forneris NS, Bates RO, Ernst CW, Raney NE, Steibel JP, Cantet RJ. Estimates of the actual relationship between half-sibs in a pig population. Journal of Animal Breeding and Genetics = Zeitschrift Fur Tierzuchtung Und Zuchtungsbiologie. 134: 109-118. PMID 27670252 DOI: 10.1111/Jbg.12236 |
0.41 |
|
| 2016 |
Duarte JL, Cantet RJ, Rubio YL, Bates RO, Ernst CW, Raney NE, Rogberg-Muñoz A, Steibel JP. Refining genomewide association for growth and fat deposition traits in an F pig population. Journal of Animal Science. 94: 1387-97. PMID 27135998 DOI: 10.2527/Jas.2015-0182 |
0.447 |
|
| 2016 |
Forneris NS, Steibel JP, Legarra A, Vitezica ZG, Bates RO, Ernst CW, Basso AL, Cantet RJ. A comparison of methods to estimate genomic relationships using pedigree and markers in livestock populations. Journal of Animal Breeding and Genetics = Zeitschrift Fur Tierzuchtung Und Zuchtungsbiologie. 133: 452-462. PMID 27135179 DOI: 10.1111/Jbg.12217 |
0.375 |
|
| 2016 |
Biegelmeyer P, Gulias-Gomes CC, Caetano AR, Steibel JP, Cardoso FF. Linkage disequilibrium, persistence of phase and effective population size estimates in Hereford and Braford cattle. Bmc Genetics. 17: 32. PMID 26832943 DOI: 10.1186/S12863-016-0339-8 |
0.654 |
|
| 2016 |
Casiro S, Velez-Irizarry D, Bates RO, Ernst CW, Steibel JP. 030 Genomewide association study for meat quality traits in an F2 Duroc × Piétrain population Journal of Animal Science. 94: 14-15. DOI: 10.2527/Msasas2016-030 |
0.301 |
|
| 2016 |
Perry KR, Velez-Irizarry D, Steibel JP, Casiro S, Funkhouser SA, Raney NE, Bates RO, Ernst CW. P3030 Identification of expression quantitative trait loci for longissimus muscle microrna expression profiles in the Michigan State University Duroc × Pietrain pig resource population Journal of Animal Science. 94: 67-67. DOI: 10.2527/Jas2016.94Supplement467X |
0.316 |
|
| 2016 |
Gualdrón Duarte JL, Cantet RJC, Bernal Rubio YL, Bates RO, Ernst CW, Raney NE, Rogberg-Muñoz A, Steibel JP. Refining genomewide association for growth and fat deposition traits in an F2 pig population Journal of Animal Science. 94: 1387-1397. DOI: 10.2527/jas2015-0182 |
0.342 |
|
| 2016 |
Steibel JP, Velez-Irizarry D, Casiro S, Ernst CW. 0793 Statistical models and tools for integration of omics data to uncover the genetic control of pork quality and growth traits Journal of Animal Science. 94: 381-382. DOI: 10.2527/Jam2016-0793 |
0.319 |
|
| 2016 |
Funkhouser SA, Bates RO, Ernst CW, Newcom DW, Steibel JP. 0325 Estimation of the composition of four U.S. swine breeds using genomic data Journal of Animal Science. 94: 156-156. DOI: 10.2527/Jam2016-0325 |
0.34 |
|
| 2016 |
Ou Z, Tempelman RJ, Steibel JP, Ernst CW, Bates RO, Chen C, Bello NM. 0305 Heteroskedastic extensions for genome-wide association studies Journal of Animal Science. 94: 145-145. DOI: 10.2527/Jam2016-0305 |
0.71 |
|
| 2015 |
Bernal Rubio YL, Gualdrón Duarte JL, Bates RO, Ernst CW, Nonneman D, Rohrer GA, King DA, Shackelford SD, Wheeler TL, Cantet RJ, Steibel JP. Implementing meta-analysis from genome-wide association studies for pork quality traits. Journal of Animal Science. 93: 5607-17. PMID 26641170 DOI: 10.2527/Jas.2015-9502 |
0.455 |
|
| 2015 |
Bernal Rubio YL, Gualdrón Duarte JL, Bates RO, Ernst CW, Nonneman D, Rohrer GA, King A, Shackelford SD, Wheeler TL, Cantet RJ, Steibel JP. Meta-analysis of genome-wide association from genomic prediction models. Animal Genetics. PMID 26607299 DOI: 10.1111/Age.12378 |
0.473 |
|
| 2015 |
Ou Z, Tempelman RJ, Steibel JP, Ernst CW, Bates RO, Bello NM. Genomic Prediction Accounting for Residual Heteroskedasticity. G3 (Bethesda, Md.). PMID 26564950 DOI: 10.1534/G3.115.022897 |
0.736 |
|
| 2015 |
Peñagaricano F, Valente BD, Steibel JP, Bates RO, Ernst CW, Khatib H, Rosa GJ. Searching for causal networks involving latent variables in complex traits: Application to growth, carcass, and meat quality traits in pigs. Journal of Animal Science. 93: 4617-23. PMID 26523553 DOI: 10.2527/Jas.2015-9213 |
0.376 |
|
| 2015 |
Peñagaricano F, Valente BD, Steibel JP, Bates RO, Ernst CW, Khatib H, Rosa GJ. Exploring causal networks underlying fat deposition and muscularity in pigs through the integration of phenotypic, genotypic and transcriptomic data. Bmc Systems Biology. 9: 58. PMID 26376630 DOI: 10.1186/S12918-015-0207-6 |
0.417 |
|
| 2015 |
Reeb PD, Bramardi SJ, Steibel JP. Assessing Dissimilarity Measures for Sample-Based Hierarchical Clustering of RNA Sequencing Data Using Plasmode Datasets. Plos One. 10: e0132310. PMID 26162080 DOI: 10.1371/Journal.Pone.0132310 |
0.321 |
|
| 2015 |
Schroyen M, Steibel JP, Koltes JE, Choi I, Raney NE, Eisley C, Fritz-Waters E, Reecy JM, Dekkers JC, Rowland RR, Lunney JK, Ernst CW, Tuggle CK. Whole blood microarray analysis of pigs showing extreme phenotypes after a porcine reproductive and respiratory syndrome virus infection. Bmc Genomics. 16: 516. PMID 26159815 DOI: 10.1186/S12864-015-1741-8 |
0.372 |
|
| 2015 |
Yang W, Chen C, Steibel JP, Ernst CW, Bates RO, Zhou L, Tempelman RJ. A comparison of alternative random regression and reaction norm models for whole genome predictions. Journal of Animal Science. 93: 2678-92. PMID 26115256 DOI: 10.2527/Jas.2014-8685 |
0.731 |
|
| 2015 |
Steibel JP, Wang H, Zhong PS. A hidden Markov approach for ascertaining cSNP genotypes from RNA sequence data in the presence of allelic imbalance by exploiting linkage disequilibrium. Bmc Bioinformatics. 16: 61. PMID 25887316 DOI: 10.1186/S12859-015-0479-2 |
0.367 |
|
| 2015 |
Bernal Rubio YL, Gualdrón Duarte JL, Bates RO, Ernst CW, Nonneman D, Rohrer GA, King DA, Shackelford SD, Wheeler TL, Cantet RJC, Steibel JP. Implementing meta-analysis from genome-wide association studies for pork quality traits Journal of Animal Science. 93: 5607-5617. DOI: 10.2527/jas2015-9502 |
0.347 |
|
| 2015 |
Dammerman KJ, Steibel JP, Scribner KT. Genetic and environmental components of phenotypic and behavioral trait variation during lake sturgeon (Acipenser fulvescens) early ontogeny Environmental Biology of Fishes. 98: 1659-1670. DOI: 10.1007/S10641-015-0392-6 |
0.352 |
|
| 2014 |
Gualdrón Duarte JL, Cantet RJ, Bates RO, Ernst CW, Raney NE, Steibel JP. Rapid screening for phenotype-genotype associations by linear transformations of genomic evaluations. Bmc Bioinformatics. 15: 246. PMID 25038782 DOI: 10.1186/1471-2105-15-246 |
0.464 |
|
| 2014 |
Huang Y, Bates RO, Ernst CW, Fix JS, Steibel JP. Estimation of U.S. Yorkshire breed composition using genomic data. Journal of Animal Science. 92: 1395-404. PMID 24663210 DOI: 10.2527/Jas.2013-6907 |
0.424 |
|
| 2014 |
Badke YM, Bates RO, Ernst CW, Fix J, Steibel JP. Accuracy of estimation of genomic breeding values in pigs using low-density genotypes and imputation. G3 (Bethesda, Md.). 4: 623-31. PMID 24531728 DOI: 10.1534/G3.114.010504 |
0.764 |
|
| 2013 |
Reeb PD, Steibel JP. Evaluating statistical analysis models for RNA sequencing experiments. Frontiers in Genetics. 4: 178. PMID 24062766 DOI: 10.3389/Fgene.2013.00178 |
0.327 |
|
| 2013 |
Gualdrón Duarte JL, Bates RO, Ernst CW, Raney NE, Cantet RJ, Steibel JP. Genotype imputation accuracy in a F2 pig population using high density and low density SNP panels. Bmc Genetics. 14: 38. PMID 23651538 DOI: 10.1186/1471-2156-14-38 |
0.374 |
|
| 2013 |
Ernst CW, Steibel JP. Molecular advances in QTL discovery and application in pig breeding. Trends in Genetics : Tig. 29: 215-24. PMID 23498076 DOI: 10.1016/J.Tig.2013.02.002 |
0.456 |
|
| 2013 |
Bello NM, Steibel JP, Erskine RJ, Tempelman RJ. Cows and herds constitute distinct hierarchical levels of heterogeneity in the variability of and association between milk yield and pregnancy outcome in dairy cows. Journal of Dairy Science. 96: 2314-26. PMID 23462172 DOI: 10.3168/Jds.2012-6264 |
0.709 |
|
| 2013 |
Badke YM, Bates RO, Ernst CW, Schwab C, Fix J, Van Tassell CP, Steibel JP. Methods of tagSNP selection and other variables affecting imputation accuracy in swine. Bmc Genetics. 14: 8. PMID 23433396 DOI: 10.1186/1471-2156-14-8 |
0.758 |
|
| 2012 |
Arceo ME, Ernst CW, Lunney JK, Choi I, Raney NE, Huang T, Tuggle CK, Rowland RR, Steibel JP. Characterizing differential individual response to porcine reproductive and respiratory syndrome virus infection through statistical and functional analysis of gene expression. Frontiers in Genetics. 3: 321. PMID 23335940 DOI: 10.3389/Fgene.2012.00321 |
0.358 |
|
| 2012 |
Choi I, Bates RO, Raney NE, Steibel JP, Ernst CW. Evaluation of QTL for carcass merit and meat quality traits in a US commercial Duroc population. Meat Science. 92: 132-8. PMID 22578477 DOI: 10.1016/J.Meatsci.2012.04.023 |
0.432 |
|
| 2012 |
Bello NM, Steibel JP, Tempelman RJ. Hierarchical Bayesian modeling of heterogeneous cluster- and subject-level associations between continuous and binary outcomes in dairy production. Biometrical Journal. Biometrische Zeitschrift. 54: 230-48. PMID 22522379 DOI: 10.1002/Bimj.201100055 |
0.71 |
|
| 2012 |
Badke YM, Bates RO, Ernst CW, Schwab C, Steibel JP. Estimation of linkage disequilibrium in four US pig breeds. Bmc Genomics. 13: 24. PMID 22252454 DOI: 10.1186/1471-2164-13-24 |
0.754 |
|
| 2012 |
Bello NM, Steibel JP, Erskine RJ, Tempelman RJ. Inferring Upon Heterogeneous Associations in Dairy Cattle Performance Using a Bivariate Hierarchical Model Journal of Agricultural, Biological, and Environmental Statistics. 17: 142-161. DOI: 10.1007/S13253-012-0084-Z |
0.714 |
|
| 2011 |
Choi I, Steibel JP, Bates RO, Raney NE, Rumph JM, Ernst CW. Identification of Carcass and Meat Quality QTL in an F(2) Duroc × Pietrain Pig Resource Population Using Different Least-Squares Analysis Models. Frontiers in Genetics. 2: 18. PMID 22303314 DOI: 10.3389/Fgene.2011.00018 |
0.405 |
|
| 2011 |
Sollero BP, Guimarães SE, Rilington VD, Tempelman RJ, Raney NE, Steibel JP, Guimarães JD, Lopes PS, Lopes MS, Ernst CW. Transcriptional profiling during foetal skeletal muscle development of Piau and Yorkshire-Landrace cross-bred pigs. Animal Genetics. 42: 600-12. PMID 22035001 DOI: 10.1111/J.1365-2052.2011.02186.X |
0.586 |
|
| 2011 |
Manjarin R, Trottier NL, Weber PS, Liesman JS, Taylor NP, Steibel JP. A simple analytical and experimental procedure for selection of reference genes for reverse-transcription quantitative PCR normalization data Journal of Dairy Science. 94: 4950-4961. PMID 21943746 DOI: 10.3168/Jds.2011-4147 |
0.327 |
|
| 2011 |
Steibel JP, Bates RO, Rosa GJ, Tempelman RJ, Rilington VD, Ragavendran A, Raney NE, Ramos AM, Cardoso FF, Edwards DB, Ernst CW. Genome-wide linkage analysis of global gene expression in loin muscle tissue identifies candidate genes in pigs. Plos One. 6: e16766. PMID 21346809 DOI: 10.1371/Journal.Pone.0016766 |
0.728 |
|
| 2010 |
Choi I, Steibel JP, Bates RO, Raney NE, Rumph JM, Ernst CW. Application of alternative models to identify QTL for growth traits in an F2 Duroc x Pietrain pig resource population. Bmc Genetics. 11: 97. PMID 21040587 DOI: 10.1186/1471-2156-11-97 |
0.387 |
|
| 2010 |
Bello NM, Steibel JP, Tempelman RJ. Hierarchical Bayesian modeling of random and residual variance-covariance matrices in bivariate mixed effects models. Biometrical Journal. Biometrische Zeitschrift. 52: 297-313. PMID 20544726 DOI: 10.1002/Bimj.200900182 |
0.719 |
|
| 2009 |
Steibel JP, Wysocki M, Lunney JK, Ramos AM, Hu ZL, Rothschild MF, Ernst CW. Assessment of the swine protein-annotated oligonucleotide microarray. Animal Genetics. 40: 883-93. PMID 19515086 DOI: 10.1111/J.1365-2052.2009.01928.X |
0.311 |
|
| 2009 |
Steibel JP, Poletto R, Coussens PM, Rosa GJ. A powerful and flexible linear mixed model framework for the analysis of relative quantification RT-PCR data. Genomics. 94: 146-52. PMID 19422910 DOI: 10.1016/J.Ygeno.2009.04.008 |
0.333 |
|
| 2009 |
Steibel JP, Rosa GJM, Tempelman RJ. Optimizing design of two-stage experiments for transcriptional profiling Computational Statistics and Data Analysis. 53: 1639-1649. DOI: 10.1016/J.Csda.2008.03.032 |
0.585 |
|
| 2008 |
Cardoso FF, Rosa GJ, Steibel JP, Ernst CW, Bates RO, Tempelman RJ. Selective transcriptional profiling and data analysis strategies for expression quantitative trait loci mapping in outbred F2 populations. Genetics. 180: 1679-90. PMID 18791244 DOI: 10.1534/Genetics.108.090969 |
0.747 |
|
| 2007 |
Almeida PE, Weber PS, Burton JL, Tempelman RJ, Steibel JP, Zanella AJ. Gene expression profiling of peripheral mononuclear cells in lame dairy cows with foot lesions. Veterinary Immunology and Immunopathology. 120: 234-45. PMID 17675248 DOI: 10.1016/J.Vetimm.2007.06.028 |
0.579 |
|
| 2006 |
Bello NM, Steibel JP, Pursley JR. Optimizing ovulation to first GnRH improved outcomes to each hormonal injection of ovsynch in lactating dairy cows Journal of Dairy Science. 89: 3413-3424. PMID 16899674 DOI: 10.3168/Jds.S0022-0302(06)72378-5 |
0.571 |
|
| 2005 |
Rosa GJ, Steibel JP, Tempelman RJ. Reassessing design and analysis of two-colour microarray experiments using mixed effects models. Comparative and Functional Genomics. 6: 123-31. PMID 18629220 DOI: 10.1002/Cfg.464 |
0.599 |
|
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