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John M. Chaston, Ph.D. - Publications

Affiliations: 
2011 University of Wisconsin, Madison, Madison, WI 
Area:
Microbiology Biology
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41 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Massey C, Nosker ME, Gale J, Scott S, Walker CJ, Cluff A, Wilcox S, Morrison A, Gottfredson Morgan SJ, Beltz J, Schmidt P, Chaston JM. Humidity determines penetrance of a latitudinal gradient in genetic selection on the microbiota by . Biorxiv : the Preprint Server For Biology. PMID 38746372 DOI: 10.1101/2024.05.02.591907  0.42
2023 Morgan SJ, Chaston JM. Flagellar Genes Are Associated with the Colonization Persistence Phenotype of the Drosophila melanogaster Microbiota. Microbiology Spectrum. e0458522. PMID 37052495 DOI: 10.1128/spectrum.04585-22  0.42
2022 Call TB, Davis EK, Bean JD, Lemmon SG, Chaston JM. Bacterial Metabolism and Transport Genes Are Associated with the Preference of Drosophila melanogaster for Dietary Yeast. Applied and Environmental Microbiology. 88: e0072022. PMID 35913151 DOI: 10.1128/aem.00720-22  0.412
2022 Craft J, Eddington H, Christman N, Pryor W, Chaston JM, Erickson D, Wilson E. Increased microbial diversity and decreased prevalence of common pathogens in the gut microbiomes of wild turkeys compared to domestic turkeys. Applied and Environmental Microbiology. AEM0142321. PMID 35044852 DOI: 10.1128/AEM.01423-21  0.385
2021 Matthews MK, Malcolm J, Chaston JM. Microbiota Influences Fitness and Timing of Reproduction in the Fruit Fly Drosophila melanogaster. Microbiology Spectrum. e0003421. PMID 34585986 DOI: 10.1128/Spectrum.00034-21  0.404
2021 Giles HH, Petersen SC, Call GB, Chaston JM. Genome Sequence of Lactiplantibacillus plantarum DmPark25_157, a Bacterial Strain Isolated from Drosophila melanogaster. Microbiology Resource Announcements. 10. PMID 33888509 DOI: 10.1128/MRA.01372-20  0.341
2021 Goddard JA, Petersen SC, Call GB, Chaston JM. Genome Sequence of Acetobacter tropicalis DmPark25_167, a Bacterium Isolated from a Drosophila melanogaster Genetic Model of Parkinson's Disease. Microbiology Resource Announcements. 10. PMID 33414300 DOI: 10.1128/MRA.01138-20  0.334
2020 Matthews MK, Wilcox H, Hughes R, Veloz M, Hammer A, Banks B, Walters A, Schneider KJ, Sexton CE, Chaston JM. Genetic influences of the microbiota on lifespan. Applied and Environmental Microbiology. PMID 32144104 DOI: 10.1128/Aem.00305-20  0.486
2019 Walters AW, Hughes RC, Call TB, Walker CJ, Wilcox H, Petersen SC, Rudman SM, Newell PD, Douglas AE, Schmidt PS, Chaston JM. The microbiota influences the Drosophila melanogaster life history strategy. Molecular Ecology. PMID 31863671 DOI: 10.1111/Mec.15344  0.414
2019 Rudman SM, Greenblum S, Hughes RC, Rajpurohit S, Kiratli O, Lowder DB, Lemmon SG, Petrov DA, Chaston JM, Schmidt P. Microbiome composition shapes rapid genomic adaptation of . Proceedings of the National Academy of Sciences of the United States of America. PMID 31527278 DOI: 10.1073/Pnas.1907787116  0.465
2018 Carroll C, Olsen KD, Ricks NJ, Dill-McFarland KA, Suen G, Robinson TF, Chaston JM. Bacterial Communities in the Alpaca Gastrointestinal Tract Vary With Diet and Body Site. Frontiers in Microbiology. 9: 3334. PMID 30713530 DOI: 10.3389/Fmicb.2018.03334  0.339
2018 Long E, Evans C, Chaston J, Udall JA. Genomic Structural Variations Within Five Continental Populations of . G3 (Bethesda, Md.). PMID 30111620 DOI: 10.1534/G3.118.200631  0.472
2018 Judd AM, Matthews MK, Hughes R, Veloz M, Sexton CE, Chaston JM. Bacterial methionine metabolism genes influence starvation resistance. Applied and Environmental Microbiology. PMID 29934334 DOI: 10.1128/Aem.00662-18  0.553
2018 White KM, Matthews MK, Hughes R, Sommer AJ, Griffitts JS, Newell PD, Chaston JM. A Metagenome-Wide Association Study and Arrayed Mutant Library ConfirmLipopolysaccharide Genes Are Necessary for Association with. G3 (Bethesda, Md.). PMID 29487183 DOI: 10.1534/G3.117.300530  0.428
2018 Sexton CE, Smith HZ, Newell PD, Douglas AE, Chaston JM. MAGNAMWAR: An R package for genome-wide association studies of bacterial orthologs. Bioinformatics (Oxford, England). PMID 29342236 DOI: 10.1093/Bioinformatics/Bty001  0.483
2017 Hammer AJ, Walters A, Carroll C, Newell PD, Chaston JM. Draft Genome Sequence of Lactobacillus paracasei DmW181, a Bacterium Isolated from Wild Drosophila. Genome Announcements. 5. PMID 28684569 DOI: 10.1128/Genomea.00545-17  0.511
2017 Winans NJ, Walter A, Chouaia B, Chaston JM, Douglas AE, Newell PD. A genomic investigation of ecological differentiation between free-living and Drosophila-associated bacteria. Molecular Ecology. PMID 28667798 DOI: 10.1111/Mec.14232  0.559
2017 Ricks NJ, Carroll C, Walters A, Newell PD, Chaston JM. Genome Sequence of Weissella cibaria DmW_103, Isolated from Wild Drosophila. Genome Announcements. 5. PMID 28619799 DOI: 10.1128/Genomea.00512-17  0.493
2017 Wright SM, Carroll C, Walters A, Newell PD, Chaston JM. Genome Sequence of Leuconostoc citreum DmW_111, Isolated from Wild Drosophila. Genome Announcements. 5. PMID 28619795 DOI: 10.1128/Genomea.00507-17  0.518
2016 Dobson AJ, Chaston JM, Douglas AE. The Drosophila transcriptional network is structured by microbiota. Bmc Genomics. 17: 975. PMID 27887564 DOI: 10.1186/S12864-016-3307-9  0.461
2016 Koyle ML, Veloz M, Judd AM, Wong AC, Newell PD, Douglas AE, Chaston JM. Rearing the Fruit Fly Drosophila melanogaster Under Axenic and Gnotobiotic Conditions. Journal of Visualized Experiments : Jove. PMID 27500374 DOI: 10.3791/54219  0.477
2015 Chaston JM, Dobson AJ, Newell PD, Douglas AE. Host genetic control of the microbiota mediates Drosophila nutritional phenotype. Applied and Environmental Microbiology. PMID 26567306 DOI: 10.1128/Aem.03301-15  0.53
2015 Dobson AJ, Chaston JM, Newell PD, Donahue L, Hermann SL, Sannino DR, Westmiller S, Wong AC, Clark AG, Lazzaro BP, Douglas AE. Corrigendum: Host genetic determinants of microbiota-dependent nutrition revealed by genome-wide analysis of Drosophila melanogaster. Nature Communications. 6: 7296. PMID 25976209 DOI: 10.1038/Ncomms8296  0.422
2015 Dobson AJ, Chaston JM, Newell PD, Donahue L, Hermann SL, Sannino DR, Westmiller S, Wong AC, Clark AG, Lazzaro BP, Douglas AE. Host genetic determinants of microbiota-dependent nutrition revealed by genome-wide analysis of Drosophila melanogaster. Nature Communications. 6: 6312. PMID 25692519 DOI: 10.1038/Ncomms7312  0.529
2014 Newell PD, Chaston JM, Wang Y, Winans NJ, Sannino DR, Wong AC, Dobson AJ, Kagle J, Douglas AE. In vivo function and comparative genomic analyses of the Drosophila gut microbiota identify candidate symbiosis factors. Frontiers in Microbiology. 5: 576. PMID 25408687 DOI: 10.3389/Fmicb.2014.00576  0.617
2014 Chaston JM, Newell PD, Douglas AE. Metagenome-wide association of microbial determinants of host phenotype in Drosophila melanogaster. Mbio. 5: e01631-14. PMID 25271286 DOI: 10.1128/Mbio.01631-14  0.586
2014 Veesenmeyer JL, Andersen AW, Lu X, Hussa EA, Murfin KE, Chaston JM, Dillman AR, Wassarman KM, Sternberg PW, Goodrich-Blair H. NilD CRISPR RNA contributes to Xenorhabdus nematophila colonization of symbiotic host nematodes. Molecular Microbiology. 93: 1026-42. PMID 25041533 DOI: 10.1111/Mmi.12715  0.71
2014 Jing X, Wong AC, Chaston JM, Colvin J, McKenzie CL, Douglas AE. The bacterial communities in plant phloem-sap-feeding insects. Molecular Ecology. 23: 1433-44. PMID 24350573 DOI: 10.1111/Mec.12637  0.5
2013 Wong AC, Chaston JM, Douglas AE. The inconstant gut microbiota of Drosophila species revealed by 16S rRNA gene analysis. The Isme Journal. 7: 1922-32. PMID 23719154 DOI: 10.1038/Ismej.2013.86  0.539
2013 Chaston JM, Murfin KE, Heath-Heckman EA, Goodrich-Blair H. Previously unrecognized stages of species-specific colonization in the mutualism between Xenorhabdus bacteria and Steinernema nematodes. Cellular Microbiology. 15: 1545-59. PMID 23480552 DOI: 10.1111/Cmi.12134  0.719
2012 Murfin KE, Chaston J, Goodrich-Blair H. Visualizing bacteria in nematodes using fluorescent microscopy. Journal of Visualized Experiments : Jove. PMID 23117838 DOI: 10.3791/4298  0.729
2012 Chaston J, Douglas AE. Making the most of "omics" for symbiosis research. The Biological Bulletin. 223: 21-9. PMID 22983030 DOI: 10.1086/Bblv223N1P21  0.476
2012 Dillman AR, Chaston JM, Adams BJ, Ciche TA, Goodrich-Blair H, Stock SP, Sternberg PW. An entomopathogenic nematode by any other name. Plos Pathogens. 8: e1002527. PMID 22396642 DOI: 10.1371/Journal.Ppat.1002527  0.748
2012 Bhasin A, Chaston JM, Goodrich-Blair H. Mutational analyses reveal overall topology and functional regions of NilB, a bacterial outer membrane protein required for host association in a model of animal-microbe mutualism. Journal of Bacteriology. 194: 1763-76. PMID 22287518 DOI: 10.1128/Jb.06711-11  0.682
2012 Sugar DR, Murfin KE, Chaston JM, Andersen AW, Richards GR, deLéon L, Baum JA, Clinton WP, Forst S, Goldman BS, Krasomil-Osterfeld KC, Slater S, Stock SP, Goodrich-Blair H. Phenotypic variation and host interactions of Xenorhabdus bovienii SS-2004, the entomopathogenic symbiont of Steinernema jollieti nematodes. Environmental Microbiology. 14: 924-39. PMID 22151385 DOI: 10.1111/J.1462-2920.2011.02663.X  0.777
2011 Chaston JM, Suen G, Tucker SL, Andersen AW, Bhasin A, Bode E, Bode HB, Brachmann AO, Cowles CE, Cowles KN, Darby C, de Léon L, Drace K, Du Z, Givaudan A, et al. The entomopathogenic bacterial endosymbionts Xenorhabdus and Photorhabdus: convergent lifestyles from divergent genomes. Plos One. 6: e27909. PMID 22125637 DOI: 10.1371/Journal.Pone.0027909  0.424
2011 Chaston JM, Dillman AR, Shapiro-Ilan DI, Bilgrami AL, Gaugler R, Hopper KR, Adams BJ. Outcrossing and crossbreeding recovers deteriorated traits in laboratory cultured Steinernema carpocapsae nematodes. International Journal For Parasitology. 41: 801-9. PMID 21447341 DOI: 10.1016/J.Ijpara.2011.02.005  0.322
2010 Chaston J, Goodrich-Blair H. Common trends in mutualism revealed by model associations between invertebrates and bacteria. Fems Microbiology Reviews. 34: 41-58. PMID 19909347 DOI: 10.1111/J.1574-6976.2009.00193.X  0.679
2010 Goodrich-Blair H, Ané JM, Bever JD, Bordenstein SR, Bright M, Chaston JM, Clay K, Currie CR, Douglas AE, Gerardo N, Harrison MJ, Ley RE, McFall-Ngai M, Mukherjee A, Rader B, et al. Symbiosis research, technology, and education: Proceedings of the 6th International Symbiosis Society Congress held in Madison Wisconsin, USA, August 2009 Symbiosis. 51: 1-12. DOI: 10.1007/S13199-010-0076-0  0.641
2009 Adhikari BN, Lin CY, Bai X, Ciche TA, Grewal PS, Dillman AR, Chaston JM, Shapiro-Ilan DI, Bilgrami AL, Gaugler R, Sternberg PW, Adams BJ. Transcriptional profiling of trait deterioration in the insect pathogenic nematode Heterorhabditis bacteriophora. Bmc Genomics. 10: 609. PMID 20003534 DOI: 10.1186/1471-2164-10-609  0.307
2007 Adams BJ, Wall DH, Gozel U, Dillman AR, Chaston JM, Hogg ID. The southernmost worm, Scottnema lindsayae (Nematoda): Diversity, dispersal and ecological stability Polar Biology. 30: 809-815. DOI: 10.1007/S00300-006-0241-3  0.301
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