Nirav Merchant - Publications

Affiliations: 
BIO5 Institute University of Arizona, Tucson, AZ 

10/37 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Swetnam TL, Antin PB, Bartelme R, Bucksch A, Camhy D, Chism G, Choi I, Cooksey AM, Cosi M, Cowen C, Culshaw-Maurer M, Davey R, Davey S, Devisetty U, Edgin T, ... ... Merchant N, et al. CyVerse: Cyberinfrastructure for open science. Plos Computational Biology. 20: e1011270. PMID 38324613 DOI: 10.1371/journal.pcbi.1011270  0.534
2021 Wieser F, Stryeck S, Lang K, Hahn C, Thallinger G, Feichtinger J, Hack P, Stepponat M, Merchant N, Lindstaedt S, Oberdorfer G. A local platform for user-friendly FAIR data management and reproducible analytics. Journal of Biotechnology. PMID 34400238 DOI: 10.1016/j.jbiotec.2021.08.004  0.378
2018 Katz DS, Allen G, Barba LA, Berg DR, Bik H, Boettiger C, Borgman CL, Brown CT, Buck S, Burd R, de Waard A, Eve MP, Granger BE, Greenberg J, Howe A, ... ... Merchant N, et al. The principles of tomorrow's university. F1000research. 7: 1926. PMID 30687499 DOI: 10.12688/F1000Research.17425.1  0.408
2017 Wu Y, Sheehan PD, Males JR, Close LM, Morzinski KM, Teske JK, Haug-Baltzell A, Merchant N, Lyons E. An ALMA and MagAO Study of the Substellar Companion GQ Lup B The Astrophysical Journal. 836: 223. DOI: 10.3847/1538-4357/Aa5B96  0.322
2016 Bucksch A, Das A, Schneider H, Merchant N, Weitz JS. Overcoming the Law of the Hidden in Cyberinfrastructures. Trends in Plant Science. PMID 28027865 DOI: 10.1016/J.Tplants.2016.11.014  0.515
2016 Devisetty UK, Kennedy K, Sarando P, Merchant N, Lyons E. Bringing your tools to CyVerse Discovery Environment using Docker. F1000research. 5: 1442. PMID 27803802 DOI: 10.12688/F1000Research.8935.1  0.331
2016 Duvick J, Standage DS, Merchant N, Brendel VP. xGDBvm: A Web GUI-Driven Workflow for Annotating Eukaryotic Genomes in the Cloud. The Plant Cell. 28: 840-54. PMID 27020957 DOI: 10.1105/Tpc.15.00933  0.398
2016 Merchant N, Lyons E, Goff S, Vaughn M, Ware D, Micklos D, Antin P. The iPlant Collaborative: Cyberinfrastructure for Enabling Data to Discovery for the Life Sciences. Plos Biology. 14: e1002342. PMID 26752627 DOI: 10.1371/Journal.Pbio.1002342  0.468
2013 Oliver SL, Lenards AJ, Barthelson RA, Merchant N, McKay SJ. Using the iPlant collaborative discovery environment. Current Protocols in Bioinformatics / Editoral Board, Andreas D. Baxevanis ... [Et Al.]. Unit1.22. PMID 23749752 DOI: 10.1002/0471250953.Bi0122S42  0.504
2011 Goff SA, Vaughn M, McKay S, Lyons E, Stapleton AE, Gessler D, Matasci N, Wang L, Hanlon M, Lenards A, Muir A, Merchant N, Lowry S, Mock S, Helmke M, et al. The iPlant Collaborative: Cyberinfrastructure for Plant Biology. Frontiers in Plant Science. 2: 34. PMID 22645531 DOI: 10.3389/Fpls.2011.00034  0.465
Low-probability matches (unlikely to be authored by this person)
2021 Bolduc B, Zablocki O, Guo J, Zayed AA, Vik D, Dehal P, Wood-Charlson EM, Arkin A, Merchant N, Pett-Ridge J, Roux S, Vaughn M, Sullivan MB. iVirus 2.0: Cyberinfrastructure-supported tools and data to power DNA virus ecology. Isme Communications. 1: 77. PMID 36765102 DOI: 10.1038/s43705-021-00083-3  0.281
2013 Hingle M, Going S, Orr B, Hongu K, Merchant N, Nichter M, Roe D, Borden L, Astroth K, Marsh S. Stealth Health: Youth Innovation, Mobile Technology, Online Social Networking, and Informal Learning to Promote Physical Activity Journal of Nutrition Education and Behavior. 45: S83-S84. DOI: 10.1016/J.Jneb.2013.04.224  0.271
2006 Haynes PA, Miller S, Radabaugh T, Galligan M, Breci L, Rohrbough J, Hickman F, Merchant N. The wildcat toolbox: a set of perl script utilities for use in peptide mass spectral database searching and proteomics experiments. Journal of Biomolecular Techniques : Jbt. 17: 97-102. PMID 16741236  0.262
2024 Iyengar MS, Merchant N, Ernst K, Rains S, Arora M, Ngaybe MGB, Gonzalez M. Resilience Informatics for Public Health. Studies in Health Technology and Informatics. 310: 1276-1280. PMID 38270020 DOI: 10.3233/SHTI231170  0.26
2016 Haug-Baltzell A, Males JR, Morzinski KM, Wu YL, Merchant N, Lyons E, Close LM. High-contrast imaging in the cloud with klipReduce and Findr Proceedings of Spie. 9913. DOI: 10.1117/12.2234095  0.25
2016 Liu Y, Khan SM, Wang J, Rynge M, Zhang Y, Zeng S, Chen S, Maldonado Dos Santos JV, Valliyodan B, Calyam PP, Merchant N, Nguyen HT, Xu D, Joshi T. PGen: large-scale genomic variations analysis workflow and browser in SoyKB. Bmc Bioinformatics. 17: 337. PMID 27766951 DOI: 10.1186/S12859-016-1227-Y  0.247
2016 Hopkins L, Turner T, Gomez S, Going S, Kutob R, Stump C, Merchant N, Hingle M. Evaluating the Public Health Impact of a Community-Based Family-Focused Diabetes Prevention Program Using RE-AIM Journal of Nutrition Education and Behavior. 48: S47. DOI: 10.1016/J.Jneb.2016.04.128  0.23
2023 Douglas MJ, Callcut R, Celi LA, Merchant N. Interpretation and Use of Applied/Operational Machine Learning and Artificial Intelligence in Surgery. The Surgical Clinics of North America. 103: 317-333. PMID 36948721 DOI: 10.1016/j.suc.2022.11.004  0.224
2023 Gonzalez EM, Zarei A, Hendler N, Simmons T, Zarei A, Demieville J, Strand R, Rozzi B, Calleja S, Ellingson H, Cosi M, Davey S, Lavelle DO, Truco MJ, Swetnam TL, ... Merchant N, et al. PhytoOracle: Scalable, modular phenomics data processing pipelines. Frontiers in Plant Science. 14: 1112973. PMID 36950362 DOI: 10.3389/fpls.2023.1112973  0.223
2011 Hongu N, Hingle MD, Merchant NC, Orr BJ, Going SB, Mosqueda MI, Thomson CA. Dietary assessment tools using mobile technology Topics in Clinical Nutrition. 26: 300-311. DOI: 10.1097/Tin.0B013E3182379525  0.213
2015 Hingle MD, Turner T, Kutob R, Merchant N, Roe DJ, Stump C, Going SB. The EPIC Kids Study: a randomized family-focused YMCA-based intervention to prevent type 2 diabetes in at-risk youth. Bmc Public Health. 15: 1253. PMID 26679186 DOI: 10.1186/S12889-015-2595-3  0.208
1995 Armstrong JD, Kaiser K, Müller A, Fischbach KF, Merchant N, Strausfeld NJ. Flybrain, an on-line atlas and database of the Drosophila nervous system. Neuron. 15: 17-20. PMID 7619521 DOI: 10.1016/0896-6273(95)90059-4  0.205
2021 Sahneh F, Balk MA, Kisley M, Chan CK, Fox M, Nord B, Lyons E, Swetnam T, Huppenkothen D, Sutherland W, Walls RL, Quinn DP, Tarin T, LeBauer D, Ribes D, ... ... Merchant N, et al. Ten simple rules to cultivate transdisciplinary collaboration in data science. Plos Computational Biology. 17: e1008879. PMID 33983959 DOI: 10.1371/journal.pcbi.1008879  0.202
2021 Guo W, Carroll ME, Singh A, Swetnam TL, Merchant N, Sarkar S, Singh AK, Ganapathysubramanian B. UAS-Based Plant Phenotyping for Research and Breeding Applications. Plant Phenomics (Washington, D.C.). 2021: 9840192. PMID 34195621 DOI: 10.34133/2021/9840192  0.197
2012 Hingle M, Nichter M, Merchant N, Hongu N, Roe D, Orr B, Going S. Development and Evaluation of an Informal SMS-based Intervention to Promote Healthy Lifestyle Behaviors in Adolescents Journal of Nutrition Education and Behavior. 44: S37-S38. DOI: 10.1016/J.Jneb.2012.03.077  0.195
2020 Ponsero A, Bartelme R, de Oliveira Almeida G, Bigelow A, Tuteja R, Ellingson H, Swetnam T, Merchant N, Oxnam M, Lyons E. Ten simple rules for organizing a data science workshop. Plos Computational Biology. 16: e1008226. PMID 33090991 DOI: 10.1371/journal.pcbi.1008226  0.173
2014 Hongu N, Going SB, Orr BJ, Merchant NC, Hingle MD, Roe DJ, Greenblatt YV, Houtkooper LB. TECH SAVVY: Mobile technologies for promoting health and physical activity Acsm's Health and Fitness Journal. 18: 8-15. DOI: 10.1249/Fit.0000000000000050  0.167
2022 Colombo PM, Freylersythe S, Sprinkle MM, Ernst KC, Yubeta M, Barbati JL, Merchant N, Iyengar S, Crane TE, Oxnam M, Rains SA. Design and implementation of a health messaging protocol employed for use within a COVID-19 health dissemination platform. Frontiers in Public Health. 10: 942795. PMID 36504998 DOI: 10.3389/fpubh.2022.942795  0.163
2023 Sarkar S, Ganapathysubramanian B, Singh A, Fotouhi F, Kar S, Nagasubramanian K, Chowdhary G, Das SK, Kantor G, Krishnamurthy A, Merchant N, Singh AK. Cyber-agricultural systems for crop breeding and sustainable production. Trends in Plant Science. PMID 37648631 DOI: 10.1016/j.tplants.2023.08.001  0.136
2006 Rohrbough JG, Breci L, Merchant N, Miller S, Haynes PA. Verification of single-peptide protein identifications by the application of complementary database search algorithms. Journal of Biomolecular Techniques : Jbt. 17: 327-32. PMID 17122065  0.135
1996 Jagdale SS, Merchant N. Implementing distributed controls for FMCs using internet utilities Computers & Industrial Engineering. 31: 87-90. DOI: 10.1016/0360-8352(96)00085-X  0.116
2008 Schlecht J, Kaplan ME, Barnard K, Karafet T, Hammer MF, Merchant NC. Machine-learning approaches for classifying haplogroup from Y chromosome STR data. Plos Computational Biology. 4: e1000093. PMID 18551166 DOI: 10.1371/Journal.Pcbi.1000093  0.102
2020 Rains SA, Crane TE, Iyengar S, Merchant N, Oxnam M, Sprinkle MM, Ernst KC. Community-Level Health Promotion during a Pandemic: Key Considerations for Health Communication. Health Communication. 1-3. PMID 33084404 DOI: 10.1080/10410236.2020.1837443  0.078
2015 Hongu N, Pope BT, Bilgiç P, Orr BJ, Suzuki A, Kim AS, Merchant NC, Roe DJ. Usability of a smartphone food picture app for assisting 24-hour dietary recall: a pilot study. Nutrition Research and Practice. 9: 207-12. PMID 25861429 DOI: 10.4162/Nrp.2015.9.2.207  0.076
2013 Brotherton P, Haak W, Templeton J, Brandt G, Soubrier J, Jane Adler C, Richards SM, Sarkissian CD, Ganslmeier R, Friederich S, Dresely V, van Oven M, Kenyon R, Van der Hoek MB, Korlach J, ... ... Merchant NC, et al. Neolithic mitochondrial haplogroup H genomes and the genetic origins of Europeans. Nature Communications. 4: 1764. PMID 23612305 DOI: 10.1038/Ncomms2656  0.064
2021 Harris DT, Badowski M, Jernigan B, Sprissler R, Edwards T, Cohen R, Paul S, Merchant N, Weinkauf CC, Bime C, Erickson HE, Bixby B, Parthasarathy S, Chaudhary S, Natt B, et al. SARS-CoV-2 Rapid Antigen Testing of Symptomatic and Asymptomatic Individuals on the University of Arizona Campus. Biomedicines. 9. PMID 34066047 DOI: 10.3390/biomedicines9050539  0.056
2004 Nouzova M, Holtan N, Oshiro MM, Isett RB, Munoz-Rodriguez JL, List AF, Narro ML, Miller SJ, Merchant NC, Futscher BW. Epigenomic changes during leukemia cell differentiation: analysis of histone acetylation and cytosine methylation using CpG island microarrays. The Journal of Pharmacology and Experimental Therapeutics. 311: 968-81. PMID 15302897 DOI: 10.1124/Jpet.104.072488  0.019
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