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Tokio Kogoma - Publications

Affiliations: 
1974-1997 Biology University of New Mexico, Albuquerque, NM, United States 
Area:
DNA replication, recombination and transcription
Website:
https://doi.org/10.1016/S0968-0004(00)01572-3
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43 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2000 Kasahara M, Clikeman JA, Bates DB, Kogoma T. RecA protein-dependent R-loop formation in vitro. Genes & Development. 14: 360-365. DOI: 10.1101/Gad.14.3.360  0.549
1998 Asai T, Bates DB, Boye E, Kogoma T. Are minichromosomes valid model systems for DNA replication control? Lessons learned from Escherichia coli. Molecular Microbiology. 29: 671-5. PMID 9723907 DOI: 10.1046/J.1365-2958.1998.00901.X  0.641
1997 Bates DB, Boye E, Asai T, Kogoma T. The absence of effect of gid or mioC transcription on the initiation of chromosomal replication in Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America. 94: 12497-502. PMID 9356478 DOI: 10.1073/Pnas.94.23.12497  0.614
1997 Kogoma T. Is RecF a DNA replication protein Proceedings of the National Academy of Sciences of the United States of America. 94: 3483-3484. PMID 9108000 DOI: 10.1073/Pnas.94.8.3483  0.57
1997 Kogoma T, Maldonado RR. DNA polymerase I in constitutive stable DNA replication in Escherichia coli. Journal of Bacteriology. 179: 2109-2115. PMID 9079893 DOI: 10.1128/Jb.179.7.2109-2115.1997  0.58
1997 Kogoma T. Stable DNA replication: interplay between DNA replication, homologous recombination, and transcription. Microbiology and Molecular Biology Reviews. 61: 212-238. DOI: 10.1128/.61.2.212-238.1997  0.646
1996 Hong X, Cadwell GW, Kogoma T. Activation of stable DNA replication in rapidly growing Escherichia coli at the time of entry to stationary phase Molecular Microbiology. 21: 953-961. PMID 8885266 DOI: 10.1046/J.1365-2958.1996.591419.X  0.592
1996 Kogoma T. Recombination by Replication Cell. 85: 625-627. PMID 8646771 DOI: 10.1016/S0092-8674(00)81229-5  0.54
1996 Kogoma T, Cadwell GW, Barnard KG, Asai T. The DNA replication priming protein, PriA, is required for homologous recombination and double-strand break repair. Journal of Bacteriology. 178: 1258-1264. PMID 8631700 DOI: 10.1128/Jb.178.5.1258-1264.1996  0.616
1995 Bates DB, Asai T, Cao Y, Chambers MW, Cadwell GW, Boye E, Kogoma T. The DnaA box R4 in the minimal oriC is dispensable for initiation of Escherichia coli chromosome replication. Nucleic Acids Research. 23: 3119-25. PMID 7667087 DOI: 10.1093/Nar/23.16.3119  0.651
1995 Hong X, Cadwell GW, Kogoma T. Escherichia coli RecG and RecA proteins in R-loop formation The Embo Journal. 14: 2385-2392. DOI: 10.1002/J.1460-2075.1995.Tb07233.X  0.517
1994 Asai T, Kogoma T. D-loops and R-loops: alternative mechanisms for the initiation of chromosome replication in Escherichia coli. Journal of Bacteriology. 176: 1807-1812. PMID 8144445 DOI: 10.1128/Jb.176.7.1807-1812.1994  0.432
1994 Kogoma T. Escherichia coli RNA polymerase mutants that enhance or diminish the SOS response constitutively expressed in the absence of RNase HI activity. Journal of Bacteriology. 176: 1521-1523. PMID 8113195 DOI: 10.1128/Jb.176.5.1521-1523.1994  0.428
1994 Asai T, Imai M, Kogoma T. DNA Damage-inducible Replication of the Escherichia coli Chromosome is Initiated at Separable Sites within the Minimal oriC Journal of Molecular Biology. 235: 1459-1469. PMID 8107086 DOI: 10.1006/Jmbi.1994.1101  0.591
1994 Kogoma T, Barnard KG, Hong X. RecA, Tus protein and constitutive stable DNA replication in Escherichia coli rnhA mutants. Molecular Genetics and Genomics. 244: 557-562. PMID 8078483 DOI: 10.1007/Bf00583907  0.587
1994 Asai T, Kogoma T. The RecF pathway of homologous recombination can mediate the initiation of DNA damage-inducible replication of the Escherichia coli chromosome. Journal of Bacteriology. 176: 7113-7114. PMID 7961480 DOI: 10.1128/Jb.176.22.7113-7114.1994  0.614
1994 Asai T, Bates DB, Kogoma T. DNA replication triggered by double-stranded breaks in E. coli: dependence on homologous recombination functions. Cell. 78: 1051-61. PMID 7923355 DOI: 10.1016/0092-8674(94)90279-8  0.702
1993 Hong X, Kogoma T. Absence of a direct role for RNase HI in initiation of DNA replication at the oriC site on the Escherichia coli chromosome Journal of Bacteriology. 175: 6731-6734. PMID 8407851 DOI: 10.1128/Jb.175.20.6731-6734.1993  0.553
1993 Kogoma T, Hong X, Cadwell GW, Barnard KG, Asai T. Requirement of homologous recombination functions for viability of the Escherichia coli cell that lacks RNase HI and exonuclease V activities. Biochimie. 75: 89-99. PMID 8389213 DOI: 10.1016/0300-9084(93)90029-R  0.508
1993 Cao Y, Kogoma T. Requirement for the polymerization and 5'-->3' exonuclease activities of DNA polymerase I in initiation of DNA replication at oriK sites in the absence of RecA in Escherichia coli rnhA mutants. Journal of Bacteriology. 175: 7254-7259. PMID 8226672 DOI: 10.1128/Jb.175.22.7254-7259.1993  0.568
1993 Cao Y, Rowland RR, Kogoma T. DNA polymerase I and the bypassing of RecA dependence of constitutive stable DNA replication in Escherichia coli rnhA mutants. Journal of Bacteriology. 175: 7247-53. PMID 8226671 DOI: 10.1128/Jb.175.22.7247-7253.1993  0.61
1993 Asai T, Sommer S, Bailone A, Kogoma T. Homologous recombination-dependent initiation of DNA replication from DNA damage-inducible origins in Escherichia coli The Embo Journal. 12: 3287-3295. DOI: 10.1002/J.1460-2075.1993.Tb05998.X  0.6
1992 Magee TR, Asai T, Malka D, Kogoma T. DNA damage-inducible origins of DNA replication in Escherichia coli. The Embo Journal. 11: 4219-4225. DOI: 10.1002/J.1460-2075.1992.Tb05516.X  0.617
1991 Magee TR, Kogoma T. Rifampin-resistant replication of pBR322 derivatives in Escherichia coli cells induced for the SOS response Journal of Bacteriology. 173: 4736-4741. PMID 1856169 DOI: 10.1128/Jb.173.15.4736-4741.1991  0.515
1990 Magee TR, Kogoma T. Requirement of RecBC enzyme and an elevated level of activated RecA for induced stable DNA replication in Escherichia coli Journal of Bacteriology. 172: 1834-1839. PMID 2180906 DOI: 10.1128/Jb.172.4.1834-1839.1990  0.586
1989 Walkup LKB, Kogoma T. Escherichia coli proteins inducible by oxidative stress mediated by the superoxide radical. Journal of Bacteriology. 171: 1476-1484. PMID 2537820 DOI: 10.1128/Jb.171.3.1476-1484.1989  0.351
1988 Griffith JK, Kogoma T, Corvo DL, Anderson WL, Kazim AL. An N-terminal domain of the tetracycline resistance protein increases susceptibility to aminoglycosides and complements potassium uptake defects in Escherichia coli. Journal of Bacteriology. 170: 598-604. PMID 3276661 DOI: 10.1128/Jb.170.2.598-604.1988  0.324
1988 Kogoma T, Farr SB, Joyce KM, Natvig DO. Isolation of gene fusions (soi::lacZ) inducible by oxidative stress in Escherichia coli Proceedings of the National Academy of Sciences of the United States of America. 85: 4799-4803. PMID 2838846 DOI: 10.1073/Pnas.85.13.4799  0.338
1987 von Meyenburg K, Boye E, Skarstad K, Koppes L, Kogoma T. Mode of initiation of constitutive stable DNA replication in RNase H-defective mutants of Escherichia coli K-12. Journal of Bacteriology. 169: 2650-8. PMID 3034862 DOI: 10.1128/Jb.169.6.2650-2658.1987  0.606
1987 Kogoma T, Kline BC. Integrative suppression of dnaA(Ts) mutations mediated by plasmid F in Escherichia coli is a DnaA-dependent process. Molecular & General Genetics : Mgg. 210: 262-9. PMID 2830456 DOI: 10.1007/Bf00325692  0.383
1987 Torrey TA, Kogoma T. Genetic analysis of constitutive stable DNA replication in rnh mutants of Escherichia coli K12. Molecular Genetics and Genomics. 208: 420-427. PMID 2823060 DOI: 10.1007/Bf00328133  0.506
1986 Subia NL, Kogoma T. Concatemer formation of ColE1-type plasmids in mutants of Escherichia coli lacking RNase H activity. Journal of Molecular Biology. 189: 389-399. PMID 3023625 DOI: 10.1016/0022-2836(86)90311-6  0.602
1986 Farr SB, Natvig DO, Kogoma T. Toxicity and mutagenicity of plumbagin and the induction of a possible new DNA repair pathway in Escherichia coli. Journal of Bacteriology. 164: 1309-16. PMID 2933393 DOI: 10.1128/Jb.164.3.1309-1316.1985  0.46
1985 Kogoma T, Subia NL, Meyenburg Kv. Function of ribonuclease H in initiation of DNA replication in Escherichia coli K-12. Molecular Genetics and Genomics. 200: 103-109. PMID 2993805 DOI: 10.1007/Bf00383320  0.599
1985 Kogoma T, Skarstad K, Boye E, von Meyenburg K, Steen HB. RecA protein acts at the initiation of stable DNA replication in rnh mutants of Escherichia coli K-12. Journal of Bacteriology. 163: 439-44. PMID 2991187 DOI: 10.1128/Jb.163.2.439-444.1985  0.622
1984 Witkin EM, Kogoma T. Involvement of the activated form of RecA protein in SOS mutagenesis and stable DNA replication in Escherichia coli Proceedings of the National Academy of Sciences of the United States of America. 81: 7539-7543. PMID 6390441 DOI: 10.1073/Pnas.81.23.7539  0.56
1984 Massy Bd, Fayet O, Kogoma T. Multiple origin usage for DNA replication in sdrA(rnh) mutants of Escherichia coli K-12: Initiation in the absence of oriC Journal of Molecular Biology. 178: 227-236. PMID 6387151 DOI: 10.1016/0022-2836(84)90141-4  0.641
1984 Ogawa T, Pickett GG, Kogoma T, Kornberg A. RNase H confers specificity in the dnaA-dependent initiation of replication at the unique origin of the Escherichia coli chromosome in vivo and in vitro. Proceedings of the National Academy of Sciences of the United States of America. 81: 1040-1044. PMID 6322184 DOI: 10.1073/Pnas.81.4.1040  0.586
1984 Kogoma T. Absence of RNase H allows replication of pBR322 in Escherichia coli mutants lacking DNA polymerase I. Proceedings of the National Academy of Sciences of the United States of America. 81: 7845-7849. PMID 6096862 DOI: 10.1073/Pnas.81.24.7845  0.603
1984 Torrey TA, Atlung T, Kogoma T. dnaA suppressor (dasF) mutants of Escherichia coli are stable DNA replication (sdrA/rnh) mutants. Molecular Genetics and Genomics. 196: 350-355. PMID 6092872 DOI: 10.1007/Bf00328070  0.491
1982 Torrey TA, Kogoma T. Suppressor mutations (rin) that specifically suppress the recA+ dependence of stable DNA replication in Escherichia coli K-12 Molecular Genetics and Genomics. 187: 225-230. PMID 6757658 DOI: 10.1007/Bf00331121  0.604
1979 Kogoma T, Torrey TA, Connaughton MJ. Induction of UV-resistant DNA replication in Escherichia coli: Induced stable DNA replication as an SOS function Molecular Genetics and Genomics. 176: 1-9. PMID 396443 DOI: 10.1007/Bf00334288  0.549
1978 Kogoma T. A novel Escherichia coli mutant capable of DNA replication in the absence of protein synthesis. Journal of Molecular Biology. 121: 55-69. PMID 351189 DOI: 10.1016/0022-2836(78)90262-0  0.629
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