M. Jordan Rowley - Publications

Affiliations: 
2010-2014 University of Nebraska Medical Center, Omaha, NE, United States 

29 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2025 Raza M, Rajan AR, Kalluchi A, Saleem I, Kennedy BB, Bhakat KK, Band H, Rowley MJ, Band V. ECD functions as a novel RNA-binding protein to regulate mRNA splicing. Biorxiv : the Preprint Server For Biology. PMID 39974924 DOI: 10.1101/2025.01.24.634785  0.492
2024 George JW, Cancino RA, Griffin Miller JL, Qiu F, Lin Q, Rowley MJ, Chennathukuzhi VM, Davis JS. Characterization of m6A modifiers and RNA modifications in uterine fibroids. Endocrinology. PMID 38946397 DOI: 10.1210/endocr/bqae074  0.433
2024 Harris HL, Rowley MJ. Mechanistic drivers of chromatin organization into compartments. Current Opinion in Genetics & Development. 86: 102193. PMID 38626581 DOI: 10.1016/j.gde.2024.102193  0.341
2023 George JW, Cancino RA, Miller JLG, Qiu F, Lin Q, Rowley MJ, Chennathukuzhi VM, Davis JS. Characterization of m A modifiers and RNA modifications in uterine fibroids. Biorxiv : the Preprint Server For Biology. PMID 37609293 DOI: 10.1101/2023.08.07.552278  0.408
2020 Kuciński J, Chamera S, Kmera A, Rowley MJ, Fujii S, Khurana P, Nowotny M, Wierzbicki AT. Evolutionary history and activity of RNase H1-like proteins in Arabidopsis thaliana. Plant & Cell Physiology. PMID 32191307 DOI: 10.1093/Pcp/Pcaa040  0.668
2020 Rowley MJ, Poulet A, Nichols M, Bixler B, Sanborn A, Brouhard E, Hermetz K, Linsenbaum H, Csankovszki G, Lieberman Aiden E, Corces VG. Analysis of Hi-C data using SIP effectively identifies loops in organisms from to mammals. Genome Research. PMID 32127418 DOI: 10.1101/Gr.257832.119  0.309
2019 Ricci WA, Lu Z, Ji L, Marand AP, Ethridge CL, Murphy NG, Noshay JM, Galli M, Mejía-Guerra MK, Colomé-Tatché M, Johannes F, Rowley MJ, Corces VG, Zhai J, Scanlon MJ, et al. Widespread long-range cis-regulatory elements in the maize genome. Nature Plants. PMID 31740773 DOI: 10.1038/S41477-019-0547-0  0.36
2019 Fernandez-Albert J, Lipinski M, Lopez-Cascales MT, Rowley MJ, Martin-Gonzalez AM, Del Blanco B, Corces VG, Barco A. Immediate and deferred epigenomic signatures of in vivo neuronal activation in mouse hippocampus. Nature Neuroscience. PMID 31501571 DOI: 10.1038/S41593-019-0476-2  0.482
2019 Gutierrez-Perez I, Rowley MJ, Lyu X, Valadez-Graham V, Vallejo DM, Ballesta-Illan E, Lopez-Atalaya JP, Kremsky I, Caparros E, Corces VG, Dominguez M. Ecdysone-Induced 3D Chromatin Reorganization Involves Active Enhancers Bound by Pipsqueak and Polycomb. Cell Reports. 28: 2715-2727.e5. PMID 31484080 DOI: 10.1016/J.Celrep.2019.07.096  0.384
2019 Jung YH, Kremsky I, Gold HB, Rowley MJ, Punyawai K, Buonanotte A, Lyu X, Bixler BJ, Chan AWS, Corces VG. Maintenance of CTCF- and Transcription Factor-Mediated Interactions from the Gametes to the Early Mouse Embryo. Molecular Cell. PMID 31056445 DOI: 10.1016/J.Molcel.2019.04.014  0.414
2019 Rowley MJ, Lyu X, Rana V, Ando-Kuri M, Karns R, Bosco G, Corces VG. Condensin II Counteracts Cohesin and RNA Polymerase II in the Establishment of 3D Chromatin Organization. Cell Reports. 26: 2890-2903.e3. PMID 30865881 DOI: 10.1016/J.Celrep.2019.01.116  0.443
2018 Rowley MJ, Corces VG. Organizational principles of 3D genome architecture. Nature Reviews. Genetics. PMID 30367165 DOI: 10.1038/S41576-018-0060-8  0.356
2018 Lyu X, Rowley MJ, Corces VG. Architectural Proteins and Pluripotency Factors Cooperate to Orchestrate the Transcriptional Response of hESCs to Temperature Stress. Molecular Cell. PMID 30122536 DOI: 10.1016/J.Molcel.2018.07.012  0.365
2018 Ando-Kuri M, Rivera ISM, Rowley MJ, Corces VG. Analysis of Chromatin Interactions Mediated by Specific Architectural Proteins in Drosophila Cells. Methods in Molecular Biology (Clifton, N.J.). 1766: 239-256. PMID 29605857 DOI: 10.1007/978-1-4939-7768-0_14  0.369
2017 Rowley MJ, Rothi MH, Böhmdorfer G, Kuciński J, Wierzbicki AT. Long-range control of gene expression via RNA-directed DNA methylation. Plos Genetics. 13: e1006749. PMID 28475589 DOI: 10.1371/Journal.Pgen.1006749  0.734
2017 Gómez-Díaz E, Yerbanga RS, Lefèvre T, Cohuet A, Rowley MJ, Ouedraogo JB, Corces VG. Epigenetic regulation of Plasmodium falciparum clonally variant gene expression during development in Anopheles gambiae. Scientific Reports. 7: 40655. PMID 28091569 DOI: 10.1038/Srep40655  0.471
2016 Rowley MJ, Corces VG. Capturing native interactions: intrinsic methods to study chromatin conformation. Molecular Systems Biology. 12: 897. PMID 27940491 DOI: 10.15252/Msb.20167438  0.348
2016 Cubeñas-Potts C, Rowley MJ, Lyu X, Li G, Lei EP, Corces VG. Different enhancer classes in Drosophila bind distinct architectural proteins and mediate unique chromatin interactions and 3D architecture. Nucleic Acids Research. PMID 27899590 DOI: 10.1093/Nar/Gkw1114  0.448
2016 Böhmdorfer G, Sethuraman S, Rowley MJ, Krzyszton M, Rothi MH, Bouzit L, Wierzbicki AT. Long non-coding RNA produced by RNA polymerase V determines boundaries of heterochromatin. Elife. 5. PMID 27779094 DOI: 10.7554/Elife.19092  0.745
2016 Rowley MJ, Corces VG. The three-dimensional genome: principles and roles of long-distance interactions. Current Opinion in Cell Biology. 40: 8-14. PMID 26852111 DOI: 10.1016/J.Ceb.2016.01.009  0.34
2016 Böhmdorfer G, Sethuraman S, Rowley MJ, Krzyszton M, Rothi MH, Bouzit L, Wierzbicki AT. Author response: Long non-coding RNA produced by RNA polymerase V determines boundaries of heterochromatin Elife. DOI: 10.7554/Elife.19092.038  0.532
2015 Ye R, Chen Z, Lian B, Rowley MJ, Xia N, Chai J, Li Y, He XJ, Wierzbicki AT, Qi Y. A Dicer-Independent Route for Biogenesis of siRNAs that Direct DNA Methylation in Arabidopsis. Molecular Cell. PMID 26711010 DOI: 10.1016/J.Molcel.2015.11.015  0.705
2014 Böhmdorfer G, Rowley MJ, Kuciński J, Zhu Y, Amies I, Wierzbicki AT. RNA-directed DNA methylation requires stepwise binding of silencing factors to long non-coding RNA. The Plant Journal : For Cell and Molecular Biology. 79: 181-91. PMID 24862207 DOI: 10.1111/Tpj.12563  0.73
2013 Rowley MJ, Böhmdorfer G, Wierzbicki AT. Analysis of long non-coding RNAs produced by a specialized RNA polymerase in Arabidopsis thaliana. Methods (San Diego, Calif.). 63: 160-9. PMID 23707621 DOI: 10.1016/J.Ymeth.2013.05.006  0.747
2013 Zhu Y, Rowley MJ, Böhmdorfer G, Wierzbicki AT. A SWI/SNF chromatin-remodeling complex acts in noncoding RNA-mediated transcriptional silencing. Molecular Cell. 49: 298-309. PMID 23246435 DOI: 10.1016/J.Molcel.2012.11.011  0.725
2013 Zheng Q, Rowley MJ, Böhmdorfer G, Sandhu D, Gregory BD, Wierzbicki AT. RNA polymerase V targets transcriptional silencing components to promoters of protein-coding genes. The Plant Journal : For Cell and Molecular Biology. 73: 179-89. PMID 23013441 DOI: 10.1111/Tpj.12034  0.74
2011 Rowley MJ, Avrutsky MI, Sifuentes CJ, Pereira L, Wierzbicki AT. Independent chromatin binding of ARGONAUTE4 and SPT5L/KTF1 mediates transcriptional gene silencing. Plos Genetics. 7: e1002120. PMID 21738482 DOI: 10.1371/Journal.Pgen.1002120  0.738
2008 Rougemaille M, Shankar S, Braun S, Rowley M, Madhani HD. Ers1, a rapidly diverging protein essential for RNA interference-dependent heterochromatic silencing in Schizosaccharomyces pombe. The Journal of Biological Chemistry. 283: 25770-3. PMID 18658154 DOI: 10.1074/Jbc.C800140200  0.515
2003 Tomei L, Altamura S, Bartholomew L, Biroccio A, Ceccacci A, Pacini L, Narjes F, Gennari N, Bisbocci M, Incitti I, Orsatti L, Harper S, Stansfield I, Rowley M, De Francesco R, et al. Mechanism of action and antiviral activity of benzimidazole-based allosteric inhibitors of the hepatitis C virus RNA-dependent RNA polymerase. Journal of Virology. 77: 13225-31. PMID 14645579  0.301
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