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Thomas M. Makris, Ph.D. - Publications

Affiliations: 
2004 University of Illinois, Urbana-Champaign, Urbana-Champaign, IL 
Area:
metalloenzymes
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50 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Amaya JA, Manley OM, Bian JC, Rutland CD, Leschinsky N, Ratigan SC, Makris TM. Enhancing ferryl accumulation in HO-dependent cytochrome P450s. Journal of Inorganic Biochemistry. 252: 112458. PMID 38141432 DOI: 10.1016/j.jinorgbio.2023.112458  0.324
2023 Gering HE, Li X, Tang H, Swartz PD, Chang WC, Makris TM. A Ferric-Superoxide Intermediate Initiates P450-Catalyzed Cyclic Dipeptide Dimerization. Journal of the American Chemical Society. PMID 37611404 DOI: 10.1021/jacs.3c04542  0.413
2023 Rade LL, Generoso WC, Das S, Souza AS, Silveira RL, Avila MC, Vieira PS, Miyamoto RY, Lima ABB, Aricetti JA, de Melo RR, Milan N, Persinoti GF, Bonomi AMFLJ, Murakami MT, ... Makris TM, et al. Dimer-assisted mechanism of (un)saturated fatty acid decarboxylation for alkene production. Proceedings of the National Academy of Sciences of the United States of America. 120: e2221483120. PMID 37216508 DOI: 10.1073/pnas.2221483120  0.378
2022 Manley OM, Phan HN, Stewart AK, Mosley DA, Xue S, Cha L, Bai H, Lightfoot VC, Rucker PA, Collins L, Williams TI, Chang WC, Guo Y, Makris TM. Self-sacrificial tyrosine cleavage by an Fe:Mn oxygenase for the biosynthesis of -aminobenzoate in . Proceedings of the National Academy of Sciences of the United States of America. 119: e2210908119. PMID 36122239 DOI: 10.1073/pnas.2210908119  0.347
2022 Dutra M, Amaya JA, McElhenney S, Manley OM, Makris TM, Rassolov V, Garashchuk S. Experimental and Theoretical Examination of the Kinetic Isotope Effect in Cytochrome P450 Decarboxylase OleT. The Journal of Physical Chemistry. B. 126: 3493-3504. PMID 35508080 DOI: 10.1021/acs.jpcb.1c10280  0.359
2021 Manley OM, Tang H, Xue S, Guo Y, Chang WC, Makris TM. BesC Initiates C-C Cleavage through a Substrate-Triggered and Reactive Diferric-Peroxo Intermediate. Journal of the American Chemical Society. 143: 21416-21424. PMID 34898198 DOI: 10.1021/jacs.1c11109  0.416
2020 Zhang L, Manley OM, Ma D, Yin Y, Makris TM, Wang Q. Enhanced P450 fatty acid decarboxylase catalysis by glucose oxidase coupling and co-assembly for biofuel generation. Bioresource Technology. 311: 123538. PMID 32485602 DOI: 10.1016/J.Biortech.2020.123538  0.447
2019 Kaniusaite M, Goode RJA, Schittenhelm RB, Makris TM, Cryle MJ. The Diiron Monooxygenase CmlA from Chloramphenicol Biosynthesis Allows Reconstitution of β-Hydroxylation during Glycopeptide Antibiotic Biosynthesis. Acs Chemical Biology. PMID 31774267 DOI: 10.1021/Acschembio.9B00862  0.417
2019 Blahut M, Wise CE, Bruno MR, Dong G, Makris TM, Frantom PA, Dunkle JA, Outten FW. Direct observation of intermediates in the SufS cysteine desulfurase reaction reveals functional roles of conserved active-site residues. The Journal of Biological Chemistry. PMID 31248989 DOI: 10.2210/Pdb6O11/Pdb  0.751
2019 Manley OM, Fan R, Guo Y, Makris TM. The oxidative decarboxylase UndA utilizes a dinuclear iron cofactor. Journal of the American Chemical Society. PMID 31083991 DOI: 10.1021/Jacs.9B02545  0.479
2018 Schlachter CR, Daneshian L, Amaya J, Klapper V, Wybouw N, Borowski T, Van Leeuwen T, Grbic V, Grbic M, Makris TM, Chruszcz M. Structural and functional characterization of an intradiol ring-cleavage dioxygenase from the polyphagous spider mite herbivore Tetranychus urticae Koch. Insect Biochemistry and Molecular Biology. PMID 30529144 DOI: 10.1016/J.Ibmb.2018.12.001  0.407
2018 Zhang L, Xu Y, Makris TM, Wang Q. Enhanced Arylamine N-Oxygenase Activity of Polymer-Enzyme Assemblies by Facilitating Electron-Transferring Efficiency. Biomacromolecules. PMID 29461819 DOI: 10.1021/Acs.Biomac.7B01706  0.423
2018 Munro AW, McLean KJ, Grant JL, Makris TM. Structure and function of the cytochrome P450 peroxygenase enzymes. Biochemical Society Transactions. PMID 29432141 DOI: 10.1042/Bst20170218  0.521
2018 Wise CE, Hsieh CH, Poplin NL, Makris TM. Dioxygen Activation by the Biofuel-Generating Cytochrome P450 OleT Acs Catalysis. 8: 9342-9352. DOI: 10.1021/Acscatal.8B02631  0.771
2018 Khivantsev K, Biancardi A, Fathizadeh M, Almalki F, Grant JL, Tien HN, Shakouri A, Blom DA, Makris TM, Regalbuto JR, Caricato M, Yu M. Catalytic N−H Bond Activation and Breaking by a Well-Defined CoII 1 O4 Site of a Heterogeneous Catalyst Chemcatchem. 10: 736-742. DOI: 10.1002/Cctc.201701268  0.325
2017 Amaya JA, Rutland CD, Leschinsky N, Makris TM. A Distal Loop Controls Product Release and Chemo- and Regioselectivity in Cytochrome P450 Decarboxylases. Biochemistry. PMID 29227633 DOI: 10.1021/Acs.Biochem.7B01065  0.466
2017 Miłaczewska AM, Kot E, Amaya JA, Makris TM, Zając M, Korecki J, Chumakov A, Trzewik B, Kędracka-Krok S, Minor W, Chruszcz M, Borowski TM. On structure and reaction mechanism of human acireductone dioxygenase. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 29193386 DOI: 10.1002/Chem.201704617  0.458
2017 Rahman MM, Smith MD, Amaya JA, Makris TM, Peryshkov DV. Activation of C-H Bonds of Alkyl- and Arylnitriles by the TaCl5-PPh3 Lewis Pair. Inorganic Chemistry. PMID 28902998 DOI: 10.1021/Acs.Inorgchem.7B01800  0.34
2017 Hsieh CH, Huang X, Amaya JA, Rutland CD, Keys CL, Groves JT, Austin RN, Makris TM. The Enigmatic P450 Decarboxylase OleT is Capable of, but Evolved to Frustrate, Oxygen Rebound Chemistry. Biochemistry. PMID 28603981 DOI: 10.1021/Acs.Biochem.7B00338  0.511
2017 Wise CE, Makris TM. Recruitment and Regulation of the Non-Ribosomal Peptide Synthetase Modifying Cytochrome P450 Involved in Nikkomycin Biosynthesis. Acs Chemical Biology. PMID 28300390 DOI: 10.1021/Acschembio.7B00081  0.744
2016 Wise CE, Grant JL, Amaya JA, Ratigan SC, Hsieh CH, Manley OM, Makris TM. Divergent mechanisms of iron-containing enzymes for hydrocarbon biosynthesis. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. PMID 28004185 DOI: 10.1007/S00775-016-1425-0  0.752
2016 Grant JL, Mitchell ME, Makris TM. Catalytic strategy for carbon-carbon bond scission by the cytochrome P450 OleT. Proceedings of the National Academy of Sciences of the United States of America. PMID 27555591 DOI: 10.1073/Pnas.1606294113  0.489
2016 Hsieh CH, Makris TM. Expanding the substrate scope and reactivity of cytochrome P450 OleT. Biochemical and Biophysical Research Communications. PMID 27246733 DOI: 10.1016/J.Bbrc.2016.05.145  0.463
2016 Amaya JA, Rutland CD, Makris TM. Mixed regiospecificity compromises alkene synthesis by a cytochrome P450 peroxygenase from Methylobacterium populi. Journal of Inorganic Biochemistry. PMID 26965726 DOI: 10.1016/J.Jinorgbio.2016.02.031  0.455
2015 Grant JL, Hsieh CH, Makris TM. Decarboxylation of fatty acids to terminal alkenes by cytochrome P450 compound I. Journal of the American Chemical Society. 137: 4940-3. PMID 25843451 DOI: 10.1021/Jacs.5B01965  0.517
2015 Makris TM, Vu VV, Meier KK, Komor AJ, Rivard BS, Münck E, Que L, Lipscomb JD. An unusual peroxo intermediate of the arylamine oxygenase of the chloramphenicol biosynthetic pathway. Journal of the American Chemical Society. 137: 1608-17. PMID 25564306 DOI: 10.1021/Ja511649N  0.442
2014 Su S, Panmanee W, Wilson JJ, Mahtani HK, Li Q, Vanderwielen BD, Makris TM, Rogers M, McDaniel C, Lipscomb JD, Irvin RT, Schurr MJ, Lancaster JR, Kovall RA, Hassett DJ. Catalase (KatA) plays a role in protection against anaerobic nitric oxide in Pseudomonas aeruginosa. Plos One. 9: e91813. PMID 24663218 DOI: 10.1371/Journal.Pone.0091813  0.351
2013 Aukema KG, Makris TM, Stoian SA, Richman JE, Münck E, Lipscomb JD, Wackett LP. Cyanobacterial aldehyde deformylase oxygenation of aldehydes yields n-1 aldehydes and alcohols in addition to alkanes. Acs Catalysis. 3: 2228-2238. PMID 24490119 DOI: 10.1021/Cs400484M  0.407
2013 Makris TM, Knoot CJ, Wilmot CM, Lipscomb JD. Structure of a dinuclear iron cluster-containing β-hydroxylase active in antibiotic biosynthesis. Biochemistry. 52: 6662-71. PMID 23980641 DOI: 10.1021/Bi400845B  0.43
2012 Thompson JW, Salahudeen AA, Chollangi S, Ruiz JC, Brautigam CA, Makris TM, Lipscomb JD, Tomchick DR, Bruick RK. Structural and molecular characterization of iron-sensing hemerythrin-like domain within F-box and leucine-rich repeat protein 5 (FBXL5). The Journal of Biological Chemistry. 287: 7357-65. PMID 22253436 DOI: 10.1074/Jbc.M111.308684  0.364
2011 Vu VV, Makris TM, Lipscomb JD, Que L. Active-site structure of a β-hydroxylase in antibiotic biosynthesis. Journal of the American Chemical Society. 133: 6938-41. PMID 21506543 DOI: 10.1021/Ja201822V  0.409
2010 Makris TM, Chakrabarti M, Münck E, Lipscomb JD. A family of diiron monooxygenases catalyzing amino acid beta-hydroxylation in antibiotic biosynthesis. Proceedings of the National Academy of Sciences of the United States of America. 107: 15391-6. PMID 20713732 DOI: 10.1073/Pnas.1007953107  0.422
2008 Denisov IG, Mak PJ, Makris TM, Sligar SG, Kincaid JR. Resonance Raman characterization of the peroxo and hydroperoxo intermediates in cytochrome P450. The Journal of Physical Chemistry. A. 112: 13172-9. PMID 18630867 DOI: 10.1021/Jp8017875  0.53
2007 Makris TM, von Koenig K, Schlichting I, Sligar SG. Alteration of P450 distal pocket solvent leads to impaired proton delivery and changes in heme geometry. Biochemistry. 46: 14129-40. PMID 18001135 DOI: 10.1021/Bi7013695  0.6
2007 Mak PJ, Denisov IG, Victoria D, Makris TM, Deng T, Sligar SG, Kincaid JR. Resonance Raman detection of the hydroperoxo intermediate in the cytochrome P450 enzymatic cycle. Journal of the American Chemical Society. 129: 6382-3. PMID 17461587 DOI: 10.1021/Ja071426H  0.51
2006 Newcomb M, Zhang R, Chandrasena RE, Halgrimson JA, Horner JH, Makris TM, Sligar SG. Cytochrome p450 compound I. Journal of the American Chemical Society. 128: 4580-1. PMID 16594688 DOI: 10.1021/Ja060048Y  0.61
2006 Makris TM, von Koenig K, Schlichting I, Sligar SG. The status of high-valent metal oxo complexes in the P450 cytochromes. Journal of Inorganic Biochemistry. 100: 507-18. PMID 16510191 DOI: 10.1016/J.Jinorgbio.2006.01.025  0.636
2005 Sligar SG, Makris TM, Denisov IG. Thirty years of microbial P450 monooxygenase research: peroxo-heme intermediates--the central bus station in heme oxygenase catalysis. Biochemical and Biophysical Research Communications. 338: 346-54. PMID 16139790 DOI: 10.1016/J.Bbrc.2005.08.094  0.566
2005 Denisov IG, Makris TM, Sligar SG, Schlichting I. Structure and chemistry of cytochrome P450. Chemical Reviews. 105: 2253-77. PMID 15941214 DOI: 10.1021/Cr0307143  0.553
2005 Ke N, Baudry J, Makris TM, Schuler MA, Sligar SG. A retinoic acid binding cytochrome P450: CYP120A1 from Synechocystis sp. PCC 6803. Archives of Biochemistry and Biophysics. 436: 110-20. PMID 15752715 DOI: 10.1016/J.Abb.2005.01.011  0.693
2005 Sono M, Perera R, Jin S, Makris TM, Sligar SG, Bryson TA, Dawson JH. The influence of substrate on the spectral properties of oxyferrous wild-type and T252A cytochrome P450-CAM. Archives of Biochemistry and Biophysics. 436: 40-9. PMID 15752707 DOI: 10.1016/J.Abb.2004.12.026  0.626
2005 Makris TM, Denisov I, Schlichting I, Sligar SG. Activation of molecular oxygen by cytochrome P450 Cytochrome P450: Structure, Mechanism, and Biochemistry: Third Edition. 149-182. DOI: 10.1007/0-387-27447-2_5  0.483
2003 Ibrahim M, Denisov IG, Makris TM, Kincaid JR, Sligar SG. Resonance Raman spectroscopic studies of hydroperoxo-myoglobin at cryogenic temperatures. Journal of the American Chemical Society. 125: 13714-8. PMID 14599210 DOI: 10.1021/Ja036949D  0.504
2003 Makris TM, Denisov IG, Sligar SG. Haem-oxygen reactive intermediates: catalysis by the two-step. Biochemical Society Transactions. 31: 516-9. PMID 12773147 DOI: 10.1042/Bst0310516  0.618
2003 Jin S, Makris TM, Bryson TA, Sligar SG, Dawson JH. Epoxidation of olefins by hydroperoxo-ferric cytochrome P450. Journal of the American Chemical Society. 125: 3406-7. PMID 12643683 DOI: 10.1021/Ja029272N  0.62
2002 Makris TM, Davydov R, Denisov IG, Hoffman BM, Sligar SG. Mechanistic enzymology of oxygen activation by the cytochromes P450. Drug Metabolism Reviews. 34: 691-708. PMID 12487147 DOI: 10.1081/Dmr-120015691  0.649
2002 Denisov IG, Makris TM, Sligar SG. Cryoradiolysis for the study of P450 reaction intermediates. Methods in Enzymology. 357: 103-15. PMID 12424902 DOI: 10.1016/S0076-6879(02)57670-9  0.566
2002 Denisov IG, Makris TM, Sligar SG. Formation and decay of hydroperoxo-ferric heme complex in horseradish peroxidase studied by cryoradiolysis. The Journal of Biological Chemistry. 277: 42706-10. PMID 12215454 DOI: 10.1074/Jbc.M207949200  0.581
2001 Davydov R, Makris TM, Kofman V, Werst DE, Sligar SG, Hoffman BM. Hydroxylation of camphor by reduced oxy-cytochrome P450cam: mechanistic implications of EPR and ENDOR studies of catalytic intermediates in native and mutant enzymes. Journal of the American Chemical Society. 123: 1403-15. PMID 11456714 DOI: 10.1021/Ja003583L  0.567
2001 Denisov IG, Makris TM, Sligar SG. Cryotrapped reaction intermediates of cytochrome p450 studied by radiolytic reduction with phosphorus-32. The Journal of Biological Chemistry. 276: 11648-52. PMID 11152470 DOI: 10.1074/Jbc.M010219200  0.628
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