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Janice D. Pata - Publications

Affiliations: 
Biomedical Sciences State University of New York, Albany, Albany, NY, United States 
Area:
Biochemistry
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27 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Nelson-Rigg R, Fagan SP, Jaremko WJ, Pata JD. Pre-Steady-State Kinetic Characterization of an Antibiotic-Resistant Mutant of Staphylococcus aureus DNA Polymerase PolC. Antimicrobial Agents and Chemotherapy. 67: e0157122. PMID 37222615 DOI: 10.1128/aac.01571-22  0.362
2022 Pata JD, Yin YW, Lahiri I. Editorial: Nucleic Acid Polymerases: The Two-Metal-Ion Mechanism and Beyond. Frontiers in Molecular Biosciences. 9: 948326. PMID 35911968 DOI: 10.3389/fmolb.2022.948326  0.491
2021 Fagan SP, Mukherjee P, Jaremko WJ, Nelson-Rigg R, Wilson RC, Dangerfield TL, Johnson KA, Lahiri I, Pata JD. Pyrophosphate release acts as a kinetic checkpoint during high-fidelity DNA replication by the Staphylococcus aureus replicative polymerase PolC. Nucleic Acids Research. PMID 34302475 DOI: 10.1093/nar/gkab613  0.681
2020 Wu Y, Jaremko WJ, Wilson RC, Pata JD. Heterotrimeric PCNA increases the activity and fidelity of Dbh, a Y-family translesion DNA polymerase prone to creating single-base deletion mutations. Dna Repair. 96: 102967. PMID 32961405 DOI: 10.1016/J.Dnarep.2020.102967  0.678
2020 Caldwell HS, Ngo K, Pata JD, Kramer LD, Ciota AT. West Nile Virus fidelity modulates the capacity for host cycling and adaptation. The Journal of General Virology. PMID 32068528 DOI: 10.1099/Jgv.0.001393  0.334
2020 Fagan S, Pata J. Pre‐Steady State Kinetic Analysis of DnaE Polymerase Illuminates the Limited (But Essential) Role It Performs in Gram‐Positive DNA Replication The Faseb Journal. 34: 1-1. DOI: 10.1096/Fasebj.2020.34.S1.07061  0.458
2019 Lasek-Nesselquist E, Lu J, Schneider R, Ma Z, Russo V, Mishra S, Pai MP, Pata JD, McDonough KA, Malik M. Insights Into the Evolution of Daptomycin Resistance From an Bioreactor Model. Frontiers in Microbiology. 10: 345. PMID 30891010 DOI: 10.3389/Fmicb.2019.00345  0.307
2017 Ranganathan S, Cheung J, Cassidy M, Ginter C, Pata JD, McDonough KA. Novel structural features drive DNA binding properties of Cmr, a CRP family protein in TB complex mycobacteria. Nucleic Acids Research. PMID 29165665 DOI: 10.1093/Nar/Gkx1148  0.534
2017 Griesemer SB, Kramer LD, Van Slyke GA, Pata JD, Gohara DW, Cameron CE, Ciota AT. Mutagen resistance and mutation restriction of St. Louis encephalitis virus. The Journal of General Virology. 98: 201-211. PMID 28284278 DOI: 10.1099/Jgv.0.000682  0.38
2014 Manjari SR, Pata JD, Banavali NK. Cytosine unstacking and strand slippage at an insertion-deletion mutation sequence in an overhang-containing DNA duplex. Biochemistry. 53: 3807-16. PMID 24854722 DOI: 10.1021/Bi500189G  0.547
2014 Mukherjee P, Wilson RC, Lahiri I, Pata JD. Three residues of the interdomain linker determine the conformation and single-base deletion fidelity of Y-family translesion polymerases. The Journal of Biological Chemistry. 289: 6323-31. PMID 24415763 DOI: 10.1074/Jbc.M113.537860  0.684
2013 Lahiri I, Mukherjee P, Pata JD. Kinetic characterization of exonuclease-deficient Staphylococcus aureus PolC, a C-family replicative DNA polymerase. Plos One. 8: e63489. PMID 23696828 DOI: 10.1371/Journal.Pone.0063489  0.677
2013 Mukherjee P, Lahiri I, Pata JD. Human polymerase kappa uses a template-slippage deletion mechanism, but can realign the slipped strands to favour base substitution mutations over deletions. Nucleic Acids Research. 41: 5024-35. PMID 23558743 DOI: 10.1093/Nar/Gkt179  0.69
2013 Wilson RC, Jackson MA, Pata JD. Y-family polymerase conformation is a major determinant of fidelity and translesion specificity. Structure (London, England : 1993). 21: 20-31. PMID 23245850 DOI: 10.1016/J.Str.2012.11.005  0.572
2011 Wu Y, Wilson RC, Pata JD. The Y-family DNA polymerase Dpo4 uses a template slippage mechanism to create single-base deletions. Journal of Bacteriology. 193: 2630-6. PMID 21421759 DOI: 10.1128/Jb.00012-11  0.669
2010 Pata JD, Jaeger J. Molecular machines and targeted molecular dynamics: DNA in motion. Structure (London, England : 1993). 18: 4-6. PMID 20152146 DOI: 10.1016/J.Str.2009.12.003  0.417
2010 Pata JD. Structural diversity of the Y-family DNA polymerases. Biochimica Et Biophysica Acta. 1804: 1124-35. PMID 20123134 DOI: 10.1016/J.Bbapap.2010.01.020  0.531
2008 Evans RJ, Davies DR, Bullard JM, Christensen J, Green LS, Guiles JW, Pata JD, Ribble WK, Janjic N, Jarvis TC. Structure of PolC reveals unique DNA binding and fidelity determinants. Proceedings of the National Academy of Sciences of the United States of America. 105: 20695-700. PMID 19106298 DOI: 10.1073/Pnas.0809989106  0.521
2008 Wilson RC, Pata JD. Structural insights into the generation of single-base deletions by the Y family DNA polymerase dbh. Molecular Cell. 29: 767-79. PMID 18374650 DOI: 10.1016/J.Molcel.2008.01.014  0.58
2007 Klarmann GJ, Eisenhauer BM, Zhang Y, Gotte M, Pata JD, Chatterjee DK, Hecht SM, Le Grice SF. Investigating the "steric gate" of human immunodeficiency virus type 1 (HIV-1) reverse transcriptase by targeted insertion of unnatural amino acids. Biochemistry. 46: 2118-26. PMID 17274599 DOI: 10.1021/Bi061772W  0.394
2006 Nag DK, Pata JD, Sironi M, Flood DR, Hart AM. Both conserved and non-conserved regions of Spo11 are essential for meiotic recombination initiation in yeast. Molecular Genetics and Genomics : Mgg. 276: 313-21. PMID 16816949 DOI: 10.1007/S00438-006-0143-7  0.428
2004 Pata JD, Stirtan WG, Goldstein SW, Steitz TA. Structure of HIV-1 reverse transcriptase bound to an inhibitor active against mutant reverse transcriptases resistant to other nonnucleoside inhibitors. Proceedings of the National Academy of Sciences of the United States of America. 101: 10548-53. PMID 15249669 DOI: 10.1073/Pnas.0404151101  0.338
2002 Pata JD, King BR, Steitz TA. Assembly, purification and crystallization of an active HIV-1 reverse transcriptase initiation complex. Nucleic Acids Research. 30: 4855-63. PMID 12433988 DOI: 10.1093/Nar/Gkf620  0.321
2001 Zhou BL, Pata JD, Steitz TA. Crystal structure of a DinB lesion bypass DNA polymerase catalytic fragment reveals a classic polymerase catalytic domain. Molecular Cell. 8: 427-37. PMID 11545744 DOI: 10.1016/S1097-2765(01)00310-0  0.557
1999 Jäger J, Pata JD. Getting a grip: Polymerases and their substrate complexes Current Opinion in Structural Biology. 9: 21-28. PMID 10047577 DOI: 10.1016/S0959-440X(99)80004-9  0.484
1988 Luehrsen KR, Pearlman RE, Pata J, Orias E. Comparison of Tetrahymena ARS sequence function in the yeasts Saccharomyces cerevisiae and Schizosaccharomyces pombe. Current Genetics. 14: 225-33. PMID 3058332 DOI: 10.1007/Bf00376742  0.383
1986 Rice CM, Aebersold R, Teplow DB, Pata J, Bell JR, Vorndam AV, Trent DW, Brandriss MW, Schlesinger JJ, Strauss JH. Partial N-terminal amino acid sequences of three nonstructural proteins of two flaviviruses. Virology. 151: 1-9. PMID 3008425 DOI: 10.1016/0042-6822(86)90098-X  0.346
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