Stephan Hamperl - Publications

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28 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Marmolejo CO, Sanchez C, Lee J, Werner M, Roberts P, Hamperl S, Saldivar JC. A phosphorylation code coordinating transcription condensate dynamics with DNA replication. Biorxiv : the Preprint Server For Biology. PMID 38765978 DOI: 10.1101/2024.05.10.593572  0.418
2024 Werner M, Hamperl S. A quick restart: RNA polymerase jumping onto post-replicative chromatin. Molecular Cell. 84: 186-188. PMID 38242096 DOI: 10.1016/j.molcel.2023.12.029  0.501
2023 Lalonde M, Ummethum H, Trauner M, Ettinger A, Hamperl S. An automated image analysis pipeline to quantify the coordination and overlap of transcription and replication activity in mammalian genomes. Methods in Cell Biology. 182: 199-219. PMID 38359977 DOI: 10.1016/bs.mcb.2023.05.012  0.412
2023 Sajid A, Hamperl S. Single-Copy Gene Locus Chromatin Purification in Saccharomyces cerevisiae. Journal of Visualized Experiments : Jove. PMID 38047569 DOI: 10.3791/65460  0.45
2023 Chanou A, Weiβ M, Holler K, Sajid A, Straub T, Krietsch J, Sanchi A, Ummethum H, Lee CSK, Kruse E, Trauner M, Werner M, Lalonde M, Lopes M, Scialdone A, ... Hamperl S, et al. Single molecule MATAC-seq reveals key determinants of DNA replication origin efficiency. Nucleic Acids Research. PMID 37956271 DOI: 10.1093/nar/gkad1022  0.458
2023 Lee CSK, Weiβ M, Hamperl S. Where and when to start: Regulating DNA replication origin activity in eukaryotic genomes. Nucleus (Austin, Tex.). 14: 2229642. PMID 37469113 DOI: 10.1080/19491034.2023.2229642  0.431
2023 Bamezai S, Pulikkottil AJ, Yadav T, Naidu VM, Mueller J, Mark J, Mandal T, Feder KA, Lehle S, Song C, Rosler R, Wiese S, Hoell JI, Kloetgen A, Karsan A, ... ... Hamperl S, et al. A non-canonical enzymatic function of PIWIL4 maintains genomic integrity and leukemic growth in AML. Blood. PMID 37146239 DOI: 10.1182/blood.2022018651  0.407
2023 Weiβ M, Chanou A, Schauer T, Tvardovskiy A, Meiser S, König AC, Schmidt T, Kruse E, Ummethum H, Trauner M, Werner M, Lalonde M, Hauck SM, Scialdone A, Hamperl S. Single-copy locus proteomics of early- and late-firing DNA replication origins identifies a role of Ask1/DASH complex in replication timing control. Cell Reports. 42: 112045. PMID 36701236 DOI: 10.1016/j.celrep.2023.112045  0.402
2022 Kukhtevich IV, Rivero-Romano M, Rakesh N, Bheda P, Chadha Y, Rosales-Becerra P, Hamperl S, Bureik D, Dornauer S, Dargemont C, Kirmizis A, Schmoller KM, Schneider R. Quantitative RNA imaging in single live cells reveals age-dependent asymmetric inheritance. Cell Reports. 41: 111656. PMID 36384120 DOI: 10.1016/j.celrep.2022.111656  0.353
2021 Chanou A, Hamperl S. Single-Molecule Techniques to Study Chromatin. Frontiers in Cell and Developmental Biology. 9: 699771. PMID 34291054 DOI: 10.3389/fcell.2021.699771  0.46
2021 Lalonde M, Trauner M, Werner M, Hamperl S. Consequences and Resolution of Transcription-Replication Conflicts. Life (Basel, Switzerland). 11. PMID 34209204 DOI: 10.3390/life11070637  0.403
2021 Chanou A, Hamperl S. Single-Molecule Techniques to Study Chromatin Frontiers in Cell and Developmental Biology. 9. DOI: 10.3389/fcell.2021.699771  0.458
2020 Crossley MP, Bocek MJ, Hamperl S, Swigut T, Cimprich KA. qDRIP: a method to quantitatively assess RNA-DNA hybrid formation genome-wide. Nucleic Acids Research. PMID 32544226 DOI: 10.1093/Nar/Gkaa500  0.722
2020 Ummethum H, Hamperl S. Proximity Labeling Techniques to Study Chromatin. Frontiers in Genetics. 11: 450. PMID 32477404 DOI: 10.3389/fgene.2020.00450  0.405
2019 Pich D, Mrozek-Gorska P, Bouvet M, Sugimoto A, Akidil E, Grundhoff A, Hamperl S, Ling PD, Hammerschmidt W. First Days in the Life of Naive Human B Lymphocytes Infected with Epstein-Barr Virus. Mbio. 10. PMID 31530670 DOI: 10.1128/Mbio.01723-19  0.31
2018 Saldivar JC, Hamperl S, Bocek MJ, Chung M, Bass TE, Cisneros-Soberanis F, Samejima K, Xie L, Paulson JR, Earnshaw WC, Cortez D, Meyer T, Cimprich KA. An intrinsic S/G checkpoint enforced by ATR. Science (New York, N.Y.). 361: 806-810. PMID 30139873 DOI: 10.1126/Science.Aap9346  0.627
2017 Hamperl S, Bocek MJ, Saldivar JC, Swigut T, Cimprich KA. Transcription-Replication Conflict Orientation Modulates R-Loop Levels and Activates Distinct DNA Damage Responses. Cell. 170: 774-786.e19. PMID 28802045 DOI: 10.1016/J.Cell.2017.07.043  0.67
2016 Hamperl S, Cimprich KA. Conflict Resolution in the Genome: How Transcription and Replication Make It Work. Cell. 167: 1455-1467. PMID 27912056 DOI: 10.1016/J.Cell.2016.09.053  0.713
2015 Brown CR, Eskin JA, Hamperl S, Griesenbeck J, Jurica MS, Boeger H. Chromatin structure analysis of single gene molecules by psoralen cross-linking and electron microscopy. Methods in Molecular Biology (Clifton, N.J.). 1228: 93-121. PMID 25311125 DOI: 10.1007/978-1-4939-1680-1_9  0.672
2014 Hamperl S, Cimprich KA. The contribution of co-transcriptional RNA:DNA hybrid structures to DNA damage and genome instability. Dna Repair. 19: 84-94. PMID 24746923 DOI: 10.1016/J.Dnarep.2014.03.023  0.715
2014 Hamperl S, Brown CR, Perez-Fernandez J, Huber K, Wittner M, Babl V, Stöckl U, Boeger H, Tschochner H, Milkereit P, Griesenbeck J. Purification of specific chromatin domains from single-copy gene loci in Saccharomyces cerevisiae. Methods in Molecular Biology (Clifton, N.J.). 1094: 329-41. PMID 24163000 DOI: 10.1007/978-1-62703-706-8_26  0.666
2014 Hamperl S, Brown CR, Garea AV, Perez-Fernandez J, Bruckmann A, Huber K, Wittner M, Babl V, Stoeckl U, Deutzmann R, Boeger H, Tschochner H, Milkereit P, Griesenbeck J. Compositional and structural analysis of selected chromosomal domains from Saccharomyces cerevisiae. Nucleic Acids Research. 42: e2. PMID 24106087 DOI: 10.1093/Nar/Gkt891  0.722
2013 Hamperl S, Wittner M, Babl V, Perez-Fernandez J, Tschochner H, Griesenbeck J. Chromatin states at ribosomal DNA loci Biochimica Et Biophysica Acta. 1829: 405-417. PMID 23291532 DOI: 10.1016/J.Bbagrm.2012.12.007  0.727
2013 Hierlmeier T, Merl J, Sauert M, Perez-Fernandez J, Schultz P, Bruckmann A, Hamperl S, Ohmayer U, Rachel R, Jacob A, Hergert K, Deutzmann R, Griesenbeck J, Hurt E, Milkereit P, et al. Rrp5p, Noc1p and Noc2p form a protein module which is part of early large ribosomal subunit precursors in S. cerevisiae. Nucleic Acids Research. 41: 1191-210. PMID 23209026 DOI: 10.1093/Nar/Gks1056  0.662
2013 Németh A, Perez-Fernandez J, Merkl P, Hamperl S, Gerber J, Griesenbeck J, Tschochner H. RNA polymerase I termination: Where is the end? Biochimica Et Biophysica Acta. 1829: 306-317. PMID 23092677 DOI: 10.1016/J.Bbagrm.2012.10.007  0.689
2012 Reiter A, Hamperl S, Seitz H, Merkl P, Perez-Fernandez J, Williams L, Gerber J, Németh A, Léger I, Gadal O, Milkereit P, Griesenbeck J, Tschochner H. The Reb1-homologue Ydr026c/Nsi1 is required for efficient RNA polymerase I termination in yeast. The Embo Journal. 31: 3480-93. PMID 22805593 DOI: 10.1038/Emboj.2012.185  0.709
2011 Wittner M, Hamperl S, Stöckl U, Seufert W, Tschochner H, Milkereit P, Griesenbeck J. Establishment and Maintenance of Alternative Chromatin States at a Multicopy Gene Locus Cell. 145: 543-554. PMID 21565613 DOI: 10.1016/J.Cell.2011.03.051  0.705
2010 Goetze H, Wittner M, Hamperl S, Hondele M, Merz K, Stoeckl U, Griesenbeck J. Alternative chromatin structures of the 35S rRNA genes in Saccharomyces cerevisiae provide a molecular basis for the selective recruitment of RNA polymerases I and II. Molecular and Cellular Biology. 30: 2028-45. PMID 20154141 DOI: 10.1128/Mcb.01512-09  0.72
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