James J. Pesavento - Publications

Affiliations: 
2006 University of Illinois, Urbana-Champaign, Urbana-Champaign, IL 

18 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Pesavento JJ, Bindra MS, Das U, Rommelfanger SR, Zhou M, Paša-Tolić L, Umen JG. pyMS-Vis, an Open-Source Python Application for Visualizing and Investigating Deconvoluted Top-Down Mass Spectrometric Experiments: A Histone Proteoform Case Study. Analytical Chemistry. PMID 39213479 DOI: 10.1021/acs.analchem.4c02650  0.388
2024 Degnan DJ, Lewis LA, Bramer LM, McCue LA, Pesavento JJ, Zhou M, Bilbao A. An R Package for Quantifying and Visualizing Positional Isomers in Top-Down LC-MS/MS Data. Journal of Proteome Research. PMID 38421884 DOI: 10.1021/acs.jproteome.3c00681  0.309
2021 Rommelfanger SR, Zhou M, Shaghasi H, Tzeng SC, Evans BS, Paša-Tolić L, Umen JG, Pesavento JJ. An Improved Top-Down Mass Spectrometry Characterization of Histones and Their Post-translational Modifications. Journal of the American Society For Mass Spectrometry. PMID 34165968 DOI: 10.1021/jasms.1c00029  0.709
2020 Wong AL, Totah NN, Iavarone AT, Pesavento JJ. Quick and Facile Preparation of Histone Proteins from the Green Microalga Chlamydomonas reinhardtii and Other Photosynthetic Organisms. Methods (San Diego, Calif.). PMID 32014607 DOI: 10.1016/J.Ymeth.2020.01.019  0.473
2018 Aebersold R, Agar JN, Amster IJ, Baker MS, Bertozzi CR, Boja ES, Costello CE, Cravatt BF, Fenselau C, Garcia BA, Ge Y, Gunawardena J, Hendrickson RC, Hergenrother PJ, Huber CG, ... ... Pesavento JJ, et al. How many human proteoforms are there? Nature Chemical Biology. 14: 206-214. PMID 29443976 DOI: 10.1038/Nchembio.2576  0.691
2017 Khan A, Eikani CK, Khan H, Iavarone AT, Pesavento JJ. Characterization of Chlamydomonas reinhardtii Core Histones by Top-Down Mass Spectrometry Reveals Unique Algae-Specific Variants and Post-Translational Modifications. Journal of Proteome Research. PMID 29198113 DOI: 10.1021/Acs.Jproteome.7B00780  0.568
2010 Zheng Y, John S, Pesavento JJ, Schultz-Norton JR, Schiltz RL, Baek S, Nardulli AM, Hager GL, Kelleher NL, Mizzen CA. Histone H1 phosphorylation is associated with transcription by RNA polymerases I and II. The Journal of Cell Biology. 189: 407-15. PMID 20439994 DOI: 10.1083/Jcb.201001148  0.526
2010 Ilves I, Petojevic T, Pesavento JJ, Botchan MR. Activation of the MCM2-7 helicase by association with Cdc45 and GINS proteins. Molecular Cell. 37: 247-58. PMID 20122406 DOI: 10.1016/J.Molcel.2009.12.030  0.325
2008 Pesavento JJ, Bullock CR, LeDuc RD, Mizzen CA, Kelleher NL. Combinatorial modification of human histone H4 quantitated by two-dimensional liquid chromatography coupled with top down mass spectrometry. The Journal of Biological Chemistry. 283: 14927-37. PMID 18381279 DOI: 10.1074/Jbc.M709796200  0.653
2008 Frank AM, Pesavento JJ, Mizzen CA, Kelleher NL, Pevzner PA. Interpreting top-down mass spectra using spectral alignment. Analytical Chemistry. 80: 2499-505. PMID 18302345 DOI: 10.1021/Ac702324U  0.533
2008 Yang H, Pesavento JJ, Starnes TW, Cryderman DE, Wallrath LL, Kelleher NL, Mizzen CA. Preferential dimethylation of histone H4 lysine 20 by Suv4-20. The Journal of Biological Chemistry. 283: 12085-92. PMID 18296440 DOI: 10.1074/Jbc.M707974200  0.595
2008 Pesavento JJ, Yang H, Kelleher NL, Mizzen CA. Certain and progressive methylation of histone H4 at lysine 20 during the cell cycle. Molecular and Cellular Biology. 28: 468-86. PMID 17967882 DOI: 10.1128/Mcb.01517-07  0.58
2007 Pesavento JJ, Garcia BA, Streeky JA, Kelleher NL, Mizzen CA. Mild performic acid oxidation enhances chromatographic and top down mass spectrometric analyses of histones. Molecular & Cellular Proteomics : McP. 6: 1510-26. PMID 17569892 DOI: 10.1074/Mcp.M600404-Mcp200  0.655
2007 Garcia BA, Pesavento JJ, Mizzen CA, Kelleher NL. Pervasive combinatorial modification of histone H3 in human cells. Nature Methods. 4: 487-9. PMID 17529979 DOI: 10.1038/Nmeth1052  0.685
2006 Pesavento JJ, Mizzen CA, Kelleher NL. Quantitative analysis of modified proteins and their positional isomers by tandem mass spectrometry: human histone H4. Analytical Chemistry. 78: 4271-80. PMID 16808433 DOI: 10.1021/Ac0600050  0.56
2006 Boyne MT, Pesavento JJ, Mizzen CA, Kelleher NL. Precise characterization of human histones in the H2A gene family by top down mass spectrometry. Journal of Proteome Research. 5: 248-53. PMID 16457589 DOI: 10.1021/Pr050269N  0.713
2006 Siuti N, Roth MJ, Mizzen CA, Kelleher NL, Pesavento JJ. Gene-specific characterization of human histone H2B by electron capture dissociation. Journal of Proteome Research. 5: 233-9. PMID 16457587 DOI: 10.1021/Pr050268V  0.641
2004 Pesavento JJ, Kim YB, Taylor GK, Kelleher NL. Shotgun annotation of histone modifications: a new approach for streamlined characterization of proteins by top down mass spectrometry. Journal of the American Chemical Society. 126: 3386-7. PMID 15025441 DOI: 10.1021/Ja039748I  0.655
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