Philip Tinnefeld - Publications

Affiliations: 
LMU Munich, München, Bayern, Germany 

147 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Wanninger S, Asadiatouei P, Bohlen J, Salem CB, Tinnefeld P, Ploetz E, Lamb DC. Deep-LASI: deep-learning assisted, single-molecule imaging analysis of multi-color DNA origami structures. Nature Communications. 14: 6564. PMID 37848439 DOI: 10.1038/s41467-023-42272-9  0.738
2023 Kramm K, Schröder T, Vera AM, Grabenhorst L, Tinnefeld P, Grohmann D. DNA Origami-Based Single-Molecule Force Spectroscopy and Applications. Methods in Molecular Biology (Clifton, N.J.). 2694: 479-507. PMID 37824019 DOI: 10.1007/978-1-0716-3377-9_23  0.314
2023 Richter L, Szalai AM, Manzanares-Palenzuela CL, Kamińska I, Tinnefeld P. Exploring the Synergies of Single-Molecule Fluorescence and 2D Materials Coupled by DNA. Advanced Materials (Deerfield Beach, Fla.). 35: e2303152. PMID 37670535 DOI: 10.1002/adma.202303152  0.37
2023 Agam G, Gebhardt C, Popara M, Mächtel R, Folz J, Ambrose B, Chamachi N, Chung SY, Craggs TD, de Boer M, Grohmann D, Ha T, Hartmann A, Hendrix J, Hirschfeld V, ... ... Tinnefeld P, et al. Reliability and accuracy of single-molecule FRET studies for characterization of structural dynamics and distances in proteins. Nature Methods. PMID 36973549 DOI: 10.1038/s41592-023-01807-0  0.768
2023 Schröder T, Bohlen J, Ochmann SE, Schüler P, Krause S, Lamb DC, Tinnefeld P. Shrinking gate fluorescence correlation spectroscopy yields equilibrium constants and separates photophysics from structural dynamics. Proceedings of the National Academy of Sciences of the United States of America. 120: e2211896120. PMID 36652471 DOI: 10.1073/pnas.2211896120  0.384
2023 Trofymchuk K, Kołątaj K, Glembockyte V, Zhu F, Acuna GP, Liedl T, Tinnefeld P. Gold Nanorod DNA Origami Antennas for 3 Orders of Magnitude Fluorescence Enhancement in NIR. Acs Nano. PMID 36594816 DOI: 10.1021/acsnano.2c09577  0.337
2021 Schröder T, Bange S, Schedlbauer J, Steiner F, Lupton JM, Tinnefeld P, Vogelsang J. How Blinking Affects Photon Correlations in Multichromophoric Nanoparticles. Acs Nano. PMID 34735135 DOI: 10.1021/acsnano.1c06649  0.375
2021 Eiring P, McLaughlin R, Matikonda SS, Han Z, Grabenhorst L, Helmerich DA, Meub M, Beliu G, Luciano M, Bandi V, Zijlstra N, Shi ZD, Tarasov S, Swenson R, Tinnefeld P, et al. Targetable conformationally restricted cyanines enable photon-count limited applications. Angewandte Chemie (International Ed. in English). PMID 34606673 DOI: 10.1002/anie.202109749  0.702
2021 Glembockyte V, Grabenhorst L, Trofymchuk K, Tinnefeld P. DNA Origami Nanoantennas for Fluorescence Enhancement. Accounts of Chemical Research. 54: 3338-3348. PMID 34435769 DOI: 10.1021/acs.accounts.1c00307  0.392
2021 Krause S, Ploetz E, Bohlen J, Schüler P, Yaadav R, Selbach F, Steiner F, Kamińska I, Tinnefeld P. Graphene-on-Glass Preparation and Cleaning Methods Characterized by Single-Molecule DNA Origami Fluorescent Probes and Raman Spectroscopy. Acs Nano. PMID 33834769 DOI: 10.1021/acsnano.0c08383  0.71
2021 Hübner K, Joshi H, Aksimentiev A, Stefani FD, Tinnefeld P, Acuna GP. Determining the In-Plane Orientation and Binding Mode of Single Fluorescent Dyes in DNA Origami Structures. Acs Nano. PMID 33660975 DOI: 10.1021/acsnano.0c10259  0.361
2021 Trofymchuk K, Glembockyte V, Grabenhorst L, Steiner F, Vietz C, Close C, Pfeiffer M, Richter L, Schütte ML, Selbach F, Yaadav R, Zähringer J, Wei Q, Ozcan A, Lalkens B, ... ... Tinnefeld P, et al. Addressable nanoantennas with cleared hotspots for single-molecule detection on a portable smartphone microscope. Nature Communications. 12: 950. PMID 33574261 DOI: 10.1038/s41467-021-21238-9  0.364
2020 Masullo LA, Steiner F, Zähringer J, Lopez LF, Bohlen J, Richter L, Cole F, Tinnefeld P, Stefani FD. Pulsed Interleaved MINFLUX. Nano Letters. PMID 33336573 DOI: 10.1021/acs.nanolett.0c04600  0.327
2020 Kramm K, Schröder T, Gouge J, Vera AM, Gupta K, Heiss FB, Liedl T, Engel C, Berger I, Vannini A, Tinnefeld P, Grohmann D. DNA origami-based single-molecule force spectroscopy elucidates RNA Polymerase III pre-initiation complex stability. Nature Communications. 11: 2828. PMID 32504003 DOI: 10.1038/S41467-020-16702-X  0.318
2020 Isselstein M, Zhang L, Glembockyte V, Brix O, Cosa G, Tinnefeld P, Cordes T. Self-Healing Dyes - Keeping The Promise? The Journal of Physical Chemistry Letters. PMID 32401520 DOI: 10.1021/Acs.Jpclett.9B03833  0.664
2020 Matikonda SS, Hammersley G, Kumari N, Grabenhorst L, Glembockyte V, Tinnefeld P, Ivanic J, Levitus M, Schnermann MJ. Impact of Cyanine Conformational Restraint in the Near-Infrared Range. The Journal of Organic Chemistry. PMID 32275153 DOI: 10.1021/Acs.Joc.0C00236  0.334
2020 Grabenhorst L, Trofymchuk K, Steiner F, Glembockyte V, Tinnefeld P. Fluorophore photostability and saturation in the hotspot of DNA origami nanoantennas. Methods and Applications in Fluorescence. 8: 024003. PMID 31931486 DOI: 10.1088/2050-6120/ab6ac8  0.462
2020 Schedlbauer J, Wilhelm P, Grabenhorst L, Federl M, Lalkens B, Hinderer F, Scherf U, Höger S, Tinnefeld P, Bange S, Vogelsang J, Lupton JM. Ultrafast Single-Molecule Fluorescence Measured by Femtosecond Double-Pulse Excitation Photon Antibunching Nano Letters. 20: 1074-1079. PMID 31869232 DOI: 10.1021/Acs.Nanolett.9B04354  0.396
2019 Hübner K, Pilo-Pais M, Selbach F, Liedl T, Tinnefeld P, Stefani FD, Acuna GP. Directing Single-Molecule Emission with DNA Origami-Assembled Optical Antennas. Nano Letters. PMID 31449421 DOI: 10.1021/Acs.Nanolett.9B02886  0.342
2019 Kaminska I, Bohlen J, Rocchetti S, Selbach F, Acuna GP, Tinnefeld P. Distance Dependence of Single-Molecule Energy Transfer to Graphene Measured with DNA Origami Nanopositioners Nano Letters. 19: 4257-4262. PMID 31251640 DOI: 10.1021/Acs.Nanolett.9B00172  0.392
2019 Bohlen J, Cuartero-González Á, Pibiri E, Ruhlandt D, Fernández-Domínguez AI, Tinnefeld P, Acuna GP. Plasmon-assisted Förster resonance energy transfer at the single-molecule level in the moderate quenching regime. Nanoscale. PMID 30946424 DOI: 10.1039/C9Nr01204D  0.397
2019 Choi Y, Schmidt C, Tinnefeld P, Bald I, Rödiger S. A new reporter design based on DNA origami nanostructures for quantification of short oligonucleotides using microbeads. Scientific Reports. 9: 4769. PMID 30886341 DOI: 10.1038/S41598-019-41136-X  0.441
2019 Vietz C, Schütte ML, Wei Q, Richter L, Lalkens B, Ozcan A, Tinnefeld P, Acuna GP. Benchmarking Smartphone Fluorescence-Based Microscopy with DNA Origami Nanobeads: Reducing the Gap toward Single-Molecule Sensitivity. Acs Omega. 4: 637-642. PMID 30775643 DOI: 10.1021/acsomega.8b03136  0.369
2019 Schröder T, Scheible MB, Steiner F, Vogelsang J, Tinnefeld P. Interchromophoric Interactions Determine the Maximum Brightness Density in DNA Origami Structures. Nano Letters. 19: 1275-1281. PMID 30681342 DOI: 10.1021/Acs.Nanolett.8B04845  0.507
2018 Hellenkamp B, Schmid S, Doroshenko O, Opanasyuk O, Kühnemuth R, Adariani SR, Ambrose B, Aznauryan M, Barth A, Birkedal V, Bowen ME, Chen H, Cordes T, Eilert T, Fijen C, ... ... Tinnefeld P, et al. Publisher Correction: Precision and accuracy of single-molecule FRET measurements-a multi-laboratory benchmark study. Nature Methods. PMID 30327572 DOI: 10.1038/S41592-018-0193-X  0.731
2018 Hellenkamp B, Schmid S, Doroshenko O, Opanasyuk O, Kühnemuth R, Rezaei Adariani S, Ambrose B, Aznauryan M, Barth A, Birkedal V, Bowen ME, Chen H, Cordes T, Eilert T, Fijen C, ... ... Tinnefeld P, et al. Precision and accuracy of single-molecule FRET measurements-a multi-laboratory benchmark study. Nature Methods. 15: 669-676. PMID 30171252 DOI: 10.1038/S41592-018-0085-0  0.764
2018 Molle J, Jakob L, Bohlen J, Raab M, Tinnefeld P, Grohmann D. Towards structural biology with super-resolution microscopy. Nanoscale. 10: 16416-16424. PMID 30141803 DOI: 10.1039/C8Nr03361G  0.499
2018 Isbaner S, Karedla N, Kaminska I, Ruhlandt D, Raab M, Bohlen J, Chizhik A, Gregor I, Tinnefeld P, Enderlein J, Tsukanov R. Axial Colocalization of Single Molecules with Nanometer Accuracy Using Metal-Induced Energy Transfer. Nano Letters. 18: 2616-2622. PMID 29562123 DOI: 10.1021/Acs.Nanolett.8B00425  0.465
2018 Hemmig EA, Fitzgerald C, Maffeo C, Hecker L, Ochmann SE, Aksimentiev A, Tinnefeld P, Keyser UF. Optical voltage sensing using DNA origami. Nano Letters. PMID 29430924 DOI: 10.1021/Acs.Nanolett.7B05354  0.354
2018 Gust A, Jakob L, Zeitler DM, Bruckmann A, Kramm K, Willkomm S, Tinnefeld P, Meister G, Grohmann D. Site-Specific Labelling of Native Mammalian Proteins for Single-Molecule FRET Measurements. Chembiochem : a European Journal of Chemical Biology. 19: 780-783. PMID 29394002 DOI: 10.1002/Cbic.201700696  0.411
2018 Raab M, Jusuk I, Molle J, Buhr E, Bodermann B, Bergmann D, Bosse H, Tinnefeld P. Using DNA origami nanorulers as traceable distance measurement standards and nanoscopic benchmark structures. Scientific Reports. 8: 1780. PMID 29379061 DOI: 10.1038/S41598-018-19905-X  0.489
2018 Kaminska I, Bohlen J, Mackowski S, Tinnefeld P, Acuna GP. Strong Plasmonic Enhancement of a Single Peridinin-Chlorophyll a-Protein Complex on DNA Origami-Based Optical Antennas. Acs Nano. 12: 1650-1655. PMID 29353479 DOI: 10.1021/Acsnano.7B08233  0.353
2017 Pilo-Pais M, Acuna GP, Tinnefeld P, Liedl T. Sculpting Light by Arranging Optical Components with DNA Nanostructures. Mrs Bulletin. 42: 936-942. PMID 31168224 DOI: 10.1557/Mrs.2017.278  0.353
2017 Ochmann SE, Vietz C, Trofymchuk K, Acuna GP, Lalkens B, Tinnefeld P. Optical Nanoantenna for Single Molecule-Based Detection of Zika Virus Nucleic Acids without Molecular Multiplication. Analytical Chemistry. 89: 13000-13007. PMID 29144729 DOI: 10.1021/Acs.Analchem.7B04082  0.452
2017 Vietz C, Lalkens B, Acuna GP, Tinnefeld P. Synergistic Combination of Unquenching and Plasmonic Fluorescence Enhancement in Fluorogenic Nucleic Acid Hybridization Probes. Nano Letters. 17: 6496-6500. PMID 28956440 DOI: 10.1021/Acs.Nanolett.7B03844  0.484
2017 Wang D, Vietz C, Schröder T, Acuna G, Lalkens B, Tinnefeld P. A DNA Walker as a Fluorescence Signal Amplifier. Nano Letters. 17: 5368-5374. PMID 28750513 DOI: 10.1021/Acs.Nanolett.7B01829  0.43
2017 Wei Q, Acuna G, Kim S, Vietz C, Tseng D, Chae J, Shir D, Luo W, Tinnefeld P, Ozcan A. Plasmonics Enhanced Smartphone Fluorescence Microscopy. Scientific Reports. 7: 2124. PMID 28522808 DOI: 10.1038/S41598-017-02395-8  0.481
2017 Vietz C, Kaminska I, Sanz Paz M, Tinnefeld P, Acuna GP. Broadband Fluorescence Enhancement with Self-Assembled Silver Nanoparticle Optical Antennas. Acs Nano. 11: 4969-4975. PMID 28445644 DOI: 10.1021/Acsnano.7B01621  0.413
2017 Raab M, Vietz C, Stefani FD, Acuna GP, Tinnefeld P. Shifting molecular localization by plasmonic coupling in a single-molecule mirage. Nature Communications. 8: 13966. PMID 28074833 DOI: 10.1038/Ncomms13966  0.447
2017 Acuna GP, Tinnefeld P. Molecule detection with sunlight Nature Photonics. 11: 616-618. DOI: 10.1038/S41566-017-0017-Z  0.463
2016 Nickels PC, Wünsch B, Holzmeister P, Bae W, Kneer LM, Grohmann D, Tinnefeld P, Liedl T. Molecular force spectroscopy with a DNA origami-based nanoscopic force clamp. Science (New York, N.Y.). 354: 305-307. PMID 27846560 DOI: 10.1126/Science.Aah5974  0.392
2016 Liu W, Naydenov B, Chakrabortty S, Wünsch B, Hübner K, Ritz S, Cölfen H, Barth H, Koynov K, Qi H, Leiter R, Reuter R, Wrachtrup J, Boldt F, Scheuer J, ... ... Tinnefeld P, et al. Fluorescent nanodiamond-gold hybrid particles for multimodal optical and electron microscopy cellular imaging. Nano Letters. PMID 27629492 DOI: 10.1021/Acs.Nanolett.6B02456  0.355
2016 Nickels PC, Høiberg HC, Simmel SS, Holzmeister P, Tinnefeld P, Liedl T. DNA Origami Seesaws as Comparative Binding Assay. Chembiochem : a European Journal of Chemical Biology. 17: 1093-6. PMID 27038073 DOI: 10.1002/Cbic.201600059  0.34
2016 Schulz S, Gietl A, Smollett K, Tinnefeld P, Werner F, Grohmann D. TFE and Spt4/5 open and close the RNA polymerase clamp during the transcription cycle. Proceedings of the National Academy of Sciences of the United States of America. 113: E1816-25. PMID 26979960 DOI: 10.1073/Pnas.1515817113  0.336
2016 Hemmig EA, Creatore C, Wünsch B, Hecker L, Mair P, Parker MA, Emmott S, Tinnefeld P, Keyser UF, Chin AW. Programming light-harvesting efficiency using DNA origami. Nano Letters. PMID 26906456 DOI: 10.1021/Acs.Nanolett.5B05139  0.387
2016 Molle J, Raab M, Holzmeister S, Schmitt-Monreal D, Grohmann D, He Z, Tinnefeld P. Superresolution microscopy with transient binding. Current Opinion in Biotechnology. 39: 8-16. PMID 26773299 DOI: 10.1016/J.Copbio.2015.12.009  0.457
2016 Vietz C, Lalkens B, Acuna GP, Tinnefeld P. Functionalizing large nanoparticles for small gaps in dimer nanoantennas New Journal of Physics. 18: 45012. DOI: 10.1088/1367-2630/18/4/045012  0.338
2015 Chen J, Ji X, Tinnefeld P, He Z. Multifunctional Dumbbell-Shaped DNA-Templated Selective Formation of Fluorescent Silver Nanoclusters or Copper Nanoparticles for Sensitive Detection of Biomolecules. Acs Applied Materials & Interfaces. PMID 26719979 DOI: 10.1021/Acsami.5B09678  0.4
2015 Puchkova A, Vietz C, Pibiri E, Wünsch B, Sanz Paz M, Acuna GP, Tinnefeld P. DNA Origami Nanoantennas with over 5000-fold Fluorescence Enhancement and Single-Molecule Detection at 25 μM. Nano Letters. PMID 26523768 DOI: 10.1021/Acs.Nanolett.5B04045  0.484
2015 Jusuk I, Vietz C, Raab M, Dammeyer T, Tinnefeld P. Super-Resolution Imaging Conditions for enhanced Yellow Fluorescent Protein (eYFP) Demonstrated on DNA Origami Nanorulers. Scientific Reports. 5: 14075. PMID 26373229 DOI: 10.1038/Srep14075  0.513
2015 Ta H, Keller J, Haltmeier M, Saka SK, Schmied J, Opazo F, Tinnefeld P, Munk A, Hell SW. Mapping molecules in scanning far-field fluorescence nanoscopy. Nature Communications. 6: 7977. PMID 26269133 DOI: 10.1038/Ncomms8977  0.491
2015 Beater S, Holzmeister P, Lalkens B, Tinnefeld P. Simple and aberration-free 4color-STED--multiplexing by transient binding. Optics Express. 23: 8630-8. PMID 25968701 DOI: 10.1364/Oe.23.008630  0.425
2015 Kaplan C, Jing B, Winterflood CM, Bridges AA, Occhipinti P, Schmied J, Grinhagens S, Gronemeyer T, Tinnefeld P, Gladfelter AS, Ries J, Ewers H. Absolute Arrangement of Subunits in Cytoskeletal Septin Filaments in Cells Measured by Fluorescence Microscopy. Nano Letters. 15: 3859-64. PMID 25939363 DOI: 10.1021/Acs.Nanolett.5B00693  0.366
2015 Hell SW, Sahl SJ, Bates M, Zhuang X, Heintzmann R, Booth MJ, Bewersdorf J, Shtengel G, Hess H, Tinnefeld P, Honigmann A, Jakobs S, Testa I, Cognet L, Lounis B, et al. The 2015 super-resolution microscopy roadmap Journal of Physics D: Applied Physics. 48. DOI: 10.1088/0022-3727/48/44/443001  0.596
2014 Holzmeister P, Pibiri E, Schmied JJ, Sen T, Acuna GP, Tinnefeld P. Quantum yield and excitation rate of single molecules close to metallic nanostructures. Nature Communications. 5: 5356. PMID 25370834 DOI: 10.1038/Ncomms6356  0.41
2014 Gust A, Zander A, Gietl A, Holzmeister P, Schulz S, Lalkens B, Tinnefeld P, Grohmann D. A starting point for fluorescence-based single-molecule measurements in biomolecular research. Molecules (Basel, Switzerland). 19: 15824-65. PMID 25271426 DOI: 10.3390/Molecules191015824  0.561
2014 Beater S, Raab M, Tinnefeld P. Toward quantitative fluorescence microscopy with DNA origami nanorulers. Methods in Cell Biology. 123: 449-66. PMID 24974042 DOI: 10.1016/B978-0-12-420138-5.00024-0  0.448
2014 Acuna G, Grohmann D, Tinnefeld P. Enhancing single-molecule fluorescence with nanophotonics. Febs Letters. 588: 3547-52. PMID 24928436 DOI: 10.1016/J.Febslet.2014.06.016  0.484
2014 Raab M, Schmied JJ, Jusuk I, Forthmann C, Tinnefeld P. Fluorescence microscopy with 6 nm resolution on DNA origami. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 15: 2431-5. PMID 24895173 DOI: 10.1002/Cphc.201402179  0.417
2014 Schmied JJ, Raab M, Forthmann C, Pibiri E, Wünsch B, Dammeyer T, Tinnefeld P. DNA origami-based standards for quantitative fluorescence microscopy. Nature Protocols. 9: 1367-91. PMID 24833175 DOI: 10.1038/Nprot.2014.079  0.466
2014 Pibiri E, Holzmeister P, Lalkens B, Acuna GP, Tinnefeld P. Single-molecule positioning in zeromode waveguides by DNA origami nanoadapters. Nano Letters. 14: 3499-503. PMID 24773477 DOI: 10.1021/Nl501064B  0.418
2014 Gietl A, Holzmeister P, Blombach F, Schulz S, von Voithenberg LV, Lamb DC, Werner F, Tinnefeld P, Grohmann D. Eukaryotic and archaeal TBP and TFB/TF(II)B follow different promoter DNA bending pathways. Nucleic Acids Research. 42: 6219-31. PMID 24744242 DOI: 10.1093/Nar/Gku273  0.33
2014 Holzmeister P, Gietl A, Tinnefeld P. Geminate recombination as a photoprotection mechanism for fluorescent dyes. Angewandte Chemie (International Ed. in English). 53: 5685-8. PMID 24715383 DOI: 10.1002/Anie.201310300  0.462
2014 Pellegrotti JV, Acuna GP, Puchkova A, Holzmeister P, Gietl A, Lalkens B, Stefani FD, Tinnefeld P. Controlled reduction of photobleaching in DNA origami-gold nanoparticle hybrids. Nano Letters. 14: 2831-6. PMID 24690008 DOI: 10.1021/Nl500841N  0.547
2014 Beater S, Holzmeister P, Pibiri E, Lalkens B, Tinnefeld P. Choosing dyes for cw-STED nanoscopy using self-assembled nanorulers. Physical Chemistry Chemical Physics : Pccp. 16: 6990-6. PMID 24599511 DOI: 10.1039/C4Cp00127C  0.466
2014 Zander A, Holzmeister P, Klose D, Tinnefeld P, Grohmann D. Single-molecule FRET supports the two-state model of Argonaute action. Rna Biology. 11: 45-56. PMID 24442234 DOI: 10.4161/Rna.27446  0.414
2014 Holzmeister P, Wünsch B, Gietl A, Tinnefeld P. Single-molecule photophysics of dark quenchers as non-fluorescent FRET acceptors. Photochemical & Photobiological Sciences : Official Journal of the European Photochemistry Association and the European Society For Photobiology. 13: 853-8. PMID 24100609 DOI: 10.1039/C3Pp50274K  0.55
2014 Holzmeister P, Acuna GP, Grohmann D, Tinnefeld P. Breaking the concentration limit of optical single-molecule detection. Chemical Society Reviews. 43: 1014-28. PMID 24019005 DOI: 10.1039/C3Cs60207A  0.437
2014 Heucke SF, Baumann F, Acuna GP, Severin PM, Stahl SW, Strackharn M, Stein IH, Altpeter P, Tinnefeld P, Gaub HE. Placing individual molecules in the center of nanoapertures. Nano Letters. 14: 391-5. PMID 23742166 DOI: 10.1021/Nl401517A  0.533
2014 Raab M, Schmied JJ, Jusuk I, Forthmann C, Tinnefeld P. Back Cover: Fluorescence Microscopy with 6 nm Resolution on DNA Origami (ChemPhysChem 12/2014) Chemphyschem. 15: 2636-2636. DOI: 10.1002/Cphc.201490061  0.452
2013 Kurz A, Schmied JJ, Grußmayer KS, Holzmeister P, Tinnefeld P, Herten DP. Counting fluorescent dye molecules on DNA origami by means of photon statistics. Small (Weinheim An Der Bergstrasse, Germany). 9: 4061-8. PMID 23794455 DOI: 10.1002/Smll.201300619  0.511
2013 Tinnefeld P. Single-molecule detection: Breaking the concentration barrier. Nature Nanotechnology. 8: 480-2. PMID 23770809 DOI: 10.1038/Nnano.2013.122  0.466
2013 Grohmann D, Werner F, Tinnefeld P. Making connections--strategies for single molecule fluorescence biophysics. Current Opinion in Chemical Biology. 17: 691-8. PMID 23769868 DOI: 10.1016/J.Cbpa.2013.05.020  0.54
2013 Acuna GP, Holzmeister P, Möller FM, Beater S, Lalkens B, Tinnefeld P. DNA-templated nanoantennas for single-molecule detection at elevated concentrations. Journal of Biomedical Optics. 18: 65001. PMID 23764748 DOI: 10.1117/12.2003565  0.456
2013 Dammeyer T, Timmis KN, Tinnefeld P. Broad host range vectors for expression of proteins with (Twin-) Strep-tag, His-tag and engineered, export optimized yellow fluorescent protein. Microbial Cell Factories. 12: 49. PMID 23687945 DOI: 10.1186/1475-2859-12-49  0.327
2013 Zhang C, Ji X, Zhang Y, Zhou G, Ke X, Wang H, Tinnefeld P, He Z. One-pot synthesized aptamer-functionalized CdTe:Zn2+ quantum dots for tumor-targeted fluorescence imaging in vitro and in vivo. Analytical Chemistry. 85: 5843-9. PMID 23682757 DOI: 10.1021/Ac400606E  0.35
2013 Schmied JJ, Forthmann C, Pibiri E, Lalkens B, Nickels P, Liedl T, Tinnefeld P. DNA origami nanopillars as standards for three-dimensional superresolution microscopy. Nano Letters. 13: 781-5. PMID 23362960 DOI: 10.1021/Nl304492Y  0.409
2013 Steinhauer C, Itano MS, Tinnefeld P. Super-resolution fluorescence imaging with blink microscopy. Methods in Molecular Biology (Clifton, N.J.). 950: 111-29. PMID 23086873 DOI: 10.1007/978-1-62703-137-0_8  0.506
2013 Möller FM, Holzmeister P, Sen T, Acuna GP, Tinnefeld P. Angular modulation of single-molecule fluorescence by gold nanoparticles on DNA origami templates Nanophotonics. 2: 167-172. DOI: 10.1515/Nanoph-2013-0011  0.441
2013 Heucke SF, Puchner EM, Stahl SW, Holleitner AW, Gaub HE, Tinnefeld P. Nanoapertures for AFM-based single-molecule force spectroscopy International Journal of Nanotechnology. 10: 607-619. DOI: 10.1504/Ijnt.2013.053529  0.39
2012 Dammeyer T, Tinnefeld P. Engineered fluorescent proteins illuminate the bacterial periplasm. Computational and Structural Biotechnology Journal. 3: e201210013. PMID 24688673 DOI: 10.5936/Csbj.201210013  0.338
2012 Schmied JJ, Gietl A, Holzmeister P, Forthmann C, Steinhauer C, Dammeyer T, Tinnefeld P. Fluorescence and super-resolution standards based on DNA origami. Nature Methods. 9: 1133-4. PMID 23223165 DOI: 10.1038/Nmeth.2254  0.457
2012 Acuna GP, Möller FM, Holzmeister P, Beater S, Lalkens B, Tinnefeld P. Fluorescence enhancement at docking sites of DNA-directed self-assembled nanoantennas. Science (New York, N.Y.). 338: 506-10. PMID 23112329 DOI: 10.1126/Science.1228638  0.443
2012 Tinnefeld P, Cordes T. 'Self-healing' dyes: Intramolecular stabilization of organic fluorophores Nature Methods. 9: 426-427. PMID 22543371 DOI: 10.1038/Nmeth.1977  0.691
2012 Gietl A, Holzmeister P, Grohmann D, Tinnefeld P. DNA origami as biocompatible surface to match single-molecule and ensemble experiments. Nucleic Acids Research. 40: e110. PMID 22523083 DOI: 10.1093/Nar/Gks326  0.476
2012 Acuna GP, Bucher M, Stein IH, Steinhauer C, Kuzyk A, Holzmeister P, Schreiber R, Moroz A, Stefani FD, Liedl T, Simmel FC, Tinnefeld P. Distance dependence of single-fluorophore quenching by gold nanoparticles studied on DNA origami. Acs Nano. 6: 3189-95. PMID 22439823 DOI: 10.1021/Nn2050483  0.482
2012 Ha T, Tinnefeld P. Photophysics of fluorescent probes for single-molecule biophysics and super-resolution imaging. Annual Review of Physical Chemistry. 63: 595-617. PMID 22404588 DOI: 10.1146/Annurev-Physchem-032210-103340  0.655
2012 Stein IH, Capone S, Smit JH, Baumann F, Cordes T, Tinnefeld P. Linking single-molecule blinking to chromophore structure and redox potentials Chemphyschem. 13: 931-937. PMID 22162072 DOI: 10.1002/Cphc.201100820  0.626
2012 Stein IH, Steinhauer C, Schüller V, Liedl T, Tinnefeld P. Single-Molecule Fluorescence Meets DNA Origami Biophysical Journal. 102. DOI: 10.1016/J.Bpj.2011.11.2121  0.501
2012 Stein IH, Capone S, Smit JH, Baumann F, Cordes T, Tinnefeld P. Cover Picture: Linking Single‐Molecule Blinking to Chromophore Structure and Redox Potentials (ChemPhysChem 4/2012) Chemphyschem. 13: 881-881. DOI: 10.1002/Cphc.201290016  0.592
2011 Smith DM, Schüller V, Forthmann C, Schreiber R, Tinnefeld P, Liedl T. A structurally variable hinged tetrahedron framework from DNA origami. Journal of Nucleic Acids. 2011: 360954. PMID 21941629 DOI: 10.4061/2011/360954  0.42
2011 Huang H, Li L, Zhou G, Liu Z, Ma Q, Feng Y, Zeng G, Tinnefeld P, He Z. Visual detection of melamine in milk samples based on label-free and labeled gold nanoparticles. Talanta. 85: 1013-9. PMID 21726732 DOI: 10.1016/J.Talanta.2011.05.006  0.309
2011 Tinnefeld P. Protein-protein interactions: Pull-down for single molecules. Nature. 473: 461-2. PMID 21614072 DOI: 10.1038/473461A  0.38
2011 Cordes T, Maiser A, Steinhauer C, Schermelleh L, Tinnefeld P. Mechanisms and advancement of antifading agents for fluorescence microscopy and single-molecule spectroscopy Physical Chemistry Chemical Physics. 13: 6699-6709. PMID 21311807 DOI: 10.1039/C0Cp01919D  0.709
2011 Stein IH, Schüller V, Böhm P, Tinnefeld P, Liedl T. Single-molecule FRET ruler based on rigid DNA origami blocks. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 12: 689-95. PMID 21308944 DOI: 10.1002/Cphc.201000781  0.484
2011 Stein IH, Steinhauer C, Tinnefeld P. Single-molecule four-color FRET visualizes energy-transfer paths on DNA origami. Journal of the American Chemical Society. 133: 4193-5. PMID 21250689 DOI: 10.1021/Ja1105464  0.449
2010 Jungmann R, Steinhauer C, Scheible M, Kuzyk A, Tinnefeld P, Simmel FC. Single-molecule kinetics and super-resolution microscopy by fluorescence imaging of transient binding on DNA origami. Nano Letters. 10: 4756-61. PMID 20957983 DOI: 10.1021/Nl103427W  0.415
2010 Vogelsang J, Steinhauer C, Forthmann C, Stein IH, Person-Skegro B, Cordes T, Tinnefeld P. Make them blink: Probes for super-resolution microscopy Chemphyschem. 11: 2475-2490. PMID 20632356 DOI: 10.1002/Cphc.201000189  0.731
2010 Kasper R, Harke B, Forthmann C, Tinnefeld P, Hell SW, Sauer M. Single-molecule STED microscopy with photostable organic fluorophores. Small (Weinheim An Der Bergstrasse, Germany). 6: 1379-84. PMID 20521266 DOI: 10.1002/Smll.201000203  0.492
2010 Cordes T, Vogelsang J, Anaya M, Spagnuolo C, Gietl A, Summerer W, Herrmann A, Müllen K, Tinnefeld P. Single-molecule redox blinking of perylene diimide derivatives in water. Journal of the American Chemical Society. 132: 2404-9. PMID 20121094 DOI: 10.1021/Ja9099714  0.737
2010 Vogelsang J, Cordes T, Forthmann C, Steinhauer C, Tinnefeld P. Intrinsically resolution enhancing probes for confocal microscopy Nano Letters. 10: 672-679. PMID 20058908 DOI: 10.1021/Nl903823S  0.713
2010 Cordes T, Strackharn M, Stahl SW, Summerer W, Steinhauer C, Forthmann C, Puchner EM, Vogelsang J, Gaub HE, Tinnefeld P. Resolving single-molecule assembled patterns with superresolution blink-microscopy. Nano Letters. 10: 645-51. PMID 20017533 DOI: 10.1021/Nl903730R  0.703
2010 Kasper R, Harke B, Forthmann C, Tinnefeld P, Hell SW, Sauer M. Fluorophores: Single-Molecule STED Microscopy with Photostable Organic Fluorophores (Small 13/2010) Small. 6: n/a-n/a. DOI: 10.1002/Smll.201090041  0.448
2009 Steinhauer C, Jungmann R, Sobey TL, Simmel FC, Tinnefeld P. DNA origami as a nanoscopic ruler for super-resolution microscopy. Angewandte Chemie (International Ed. in English). 48: 8870-3. PMID 19830751 DOI: 10.1002/Anie.200903308  0.452
2009 Person B, Stein IH, Steinhauer C, Vogelsang J, Tinnefeld P. Correlated movement and bending of nucleic acid structures visualized by multicolor single-molecule spectroscopy. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 10: 1455-60. PMID 19499555 DOI: 10.1002/Cphc.200900109  0.361
2009 Vogelsang J, Cordes T, Tinnefeld P. Single-molecule photophysics of oxazines on DNA and its application in a FRET switch Photochemical and Photobiological Sciences. 8: 486-496. PMID 19337662 DOI: 10.1039/B822318C  0.744
2009 Cordes T, Vogelsang J, Tinnefeld P. On the mechanism of trolox as antiblinking and antibleaching reagent Journal of the American Chemical Society. 131: 5018-5019. PMID 19301868 DOI: 10.1021/Ja809117Z  0.63
2009 Cordes T, Stein IH, Forthmann C, Steinhauer C, Walz M, Summerer W, Person B, Vogelsang J, Tinnefeld P. Controlling the emission of organic dyes for high sensitivity and super-resolution microscopy Optics Infobase Conference Papers. DOI: 10.1117/12.831495  0.58
2008 Seefeldt B, Kasper R, Seidel T, Tinnefeld P, Dietz KJ, Heilemann M, Sauer M. Fluorescent proteins for single-molecule fluorescence applications. Journal of Biophotonics. 1: 74-82. PMID 19343637 DOI: 10.1002/Jbio.200710024  0.539
2008 Steinhauer C, Forthmann C, Vogelsang J, Tinnefeld P. Superresolution microscopy on the basis of engineered dark states. Journal of the American Chemical Society. 130: 16840-1. PMID 19053449 DOI: 10.1021/Ja806590M  0.459
2008 Huang S, Xiao Q, He ZK, Liu Y, Tinnefeld P, Su XR, Peng XN. A high sensitive and specific QDs FRET bioprobe for MNase. Chemical Communications (Cambridge, England). 5990-2. PMID 19030562 DOI: 10.1039/B815061C  0.359
2008 Heilemann M, van de Linde S, Schüttpelz M, Kasper R, Seefeldt B, Mukherjee A, Tinnefeld P, Sauer M. Subdiffraction-resolution fluorescence imaging with conventional fluorescent probes. Angewandte Chemie (International Ed. in English). 47: 6172-6. PMID 18646237 DOI: 10.1002/Anie.200802376  0.459
2008 Vogelsang J, Kasper R, Steinhauer C, Person B, Heilemann M, Sauer M, Tinnefeld P. A reducing and oxidizing system minimizes photobleaching and blinking of fluorescent dyes. Angewandte Chemie (International Ed. in English). 47: 5465-9. PMID 18601270 DOI: 10.1002/Anie.200801518  0.413
2008 Vogelsang J, Kasper R, Steinhauer C, Person B, Heilemann M, Sauer M, Tinnefeld P. Cover Picture: A Reducing and Oxidizing System Minimizes Photobleaching and Blinking of Fluorescent Dyes (Angew. Chem. Int. Ed. 29/2008) Angewandte Chemie. 47: 5261-5261. DOI: 10.1002/Anie.200890137  0.416
2007 Vogelsang J, Doose S, Sauer M, Tinnefeld P. Single-molecule fluorescence resonance energy transfer in nanopipets: improving distance resolution and concentration range. Analytical Chemistry. 79: 7367-75. PMID 17822310 DOI: 10.1021/Ac071176N  0.508
2007 Clifford JN, Bell TD, Tinnefeld P, Heilemann M, Melnikov SM, Hotta J, Sliwa M, Dedecker P, Sauer M, Hofkens J, Yeow EK. Fluorescence of single molecules in polymer films: sensitivity of blinking to local environment. The Journal of Physical Chemistry. B. 111: 6987-91. PMID 17530801 DOI: 10.1021/Jp072864D  0.503
2007 Ross J, Buschkamp P, Fetting D, Donnermeyer A, Roth CM, Tinnefeld P. Multicolor single-molecule spectroscopy with alternating laser excitation for the investigation of interactions and dynamics. The Journal of Physical Chemistry. B. 111: 321-6. PMID 17214479 DOI: 10.1021/Jp066082G  0.463
2007 Ross J, Buschkamp P, Fetting D, Donnermeyer A, Roth CM, Tinnefeld P. Multicolor single-molecule spectroscopy with alternating laser excitation for the investigation of interactions and dynamics Journal of Physical Chemistry B. 111: 321-326. DOI: 10.1021/jp066082g  0.359
2006 Sánchez-Mosteiro G, van Dijk EM, Hernando J, Heilemann M, Tinnefeld P, Sauer M, Koberlin F, Patting M, Wahl M, Erdmann R, van Hulst NF, García-Parajó MF. DNA-based molecular wires: multiple emission pathways of individual constructs. The Journal of Physical Chemistry. B. 110: 26349-53. PMID 17181294 DOI: 10.1021/Jp064701F  0.467
2006 Heilemann M, Kasper R, Tinnefeld P, Sauer M. Dissecting and reducing the heterogeneity of excited-state energy transport in DNA-based photonic wires. Journal of the American Chemical Society. 128: 16864-75. PMID 17177437 DOI: 10.1021/Ja065585X  0.455
2006 Tinnefeld P. Detection of Single Oxygen Molecules Opens Up New Vistas for the Investigation of Molecular Cooperativity in Hemocyanins Chemphyschem. 7: 1189-1191. PMID 16673435 DOI: 10.1002/Cphc.200600101  0.364
2006 Biebricher A, Sauer M, Tinnefeld P. Radiative and nonradiative rate fluctuations of single colloidal semiconductor nanocrystals. Journal of Physical Chemistry B. 110: 5174-5178. PMID 16539443 DOI: 10.1021/Jp060660B  0.476
2006 Kurtz R, Fricke M, Kalb J, Tinnefeld P, Sauer M. Application of multiline two-photon microscopy to functional in vivo imaging. Journal of Neuroscience Methods. 151: 276-86. PMID 16442636 DOI: 10.1016/J.Jneumeth.2005.12.003  0.331
2006 Margeat E, Kapanidis AN, Tinnefeld P, Wang Y, Mukhopadhyay J, Ebright RH, Weiss S. Direct observation of abortive initiation and promoter escape within single immobilized transcription complexes. Biophysical Journal. 90: 1419-31. PMID 16299085 DOI: 10.1529/Biophysj.105.069252  0.732
2005 Heinlein T, Biebricher A, Schluter P, Roth CM, Herten DP, Wolfrum J, Heilemann M, Müller C, Tinnefeld P, Sauer M. High-resolution colocalization of single molecules within the resolution gap of far-field microscopy Chemphyschem. 6: 949-955. PMID 15884081 DOI: 10.1002/Cphc.200400622  0.686
2005 Tinnefeld P, Sauer M. Branching Out of Single‐Molecule Fluorescence Spectroscopy: Challenges for Chemistry and Influence on Biology Angewandte Chemie. 44: 2642-2671. PMID 15849689 DOI: 10.1002/Anie.200300647  0.493
2005 Heilemann M, Margeat E, Kasper R, Sauer M, Tinnefeld P. Carbocyanine dyes as efficient reversible single-molecule optical switch. Journal of the American Chemical Society. 127: 3801-6. PMID 15771514 DOI: 10.1021/Ja044686X  0.508
2005 Tinnefeld P, Heilemann M, Sauer M. Design of molecular photonic wires based on multistep electronic excitation transfer. Chemphyschem. 6: 217-222. PMID 15751339 DOI: 10.1002/Cphc.200400513  0.451
2005 Biebricher A, Paul A, Tinnefeld P, Gölzhäuser A, Sauer M. Controlled three-dimensional immobilization of biomolecules on chemically patterned surfaces. Journal of Biotechnology. 112: 97-107. PMID 15288945 DOI: 10.1016/J.Jbiotec.2004.03.019  0.463
2005 Tinnefeld P, Sauer M. Cover Picture: Branching Out of Single‐Molecule Fluorescence Spectroscopy: Challenges for Chemistry and Influence on Biology (Angew. Chem. Int. Ed. 18/2005) Angewandte Chemie. 44: 2613-2613. DOI: 10.1002/Anie.200590060  0.459
2004 Tinnefeld P, Hofkens J, Herten DP, Masuo S, Vosch T, Cotlet M, Habuchi S, Müllen K, De Schryver FC, Sauer M. Higher-excited-state photophysical pathways in multichromophoric systems revealed by single-molecule fluorescence spectroscopy. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 5: 1786-90. PMID 15580942 DOI: 10.1002/Cphc.200400325  0.788
2004 Heilemann M, Tinnefeld P, Sanchez Mosteiro G, Garcia Parajo M, Van Hulst NF, Sauer M. Multistep energy transfer in single molecular photonic wires. Journal of the American Chemical Society. 126: 6514-5. PMID 15161254 DOI: 10.1021/Ja049351U  0.533
2004 Neuweiler H, Herten DP, Marme N, Knemeyer JP, Piestert O, Tinnefeld P, Sauer M. Probing conformational dynamics by photoinduced electron transfer Biomedical Optics. 5322: 8-19. DOI: 10.1117/12.531167  0.425
2004 Bell TDM, Habuchi S, Masuo S, Österling I, Müllen K, Tinnefeld P, Sauer M, van der Auweraer M, Hofkens J, De Schryver FC. Single Photon Emission from a Dendrimer Containing Eight Perylene Diimide Chromophores Australian Journal of Chemistry. 57: 1169. DOI: 10.1071/Ch04133  0.603
2003 Hofkens J, Cotlet M, Vosch T, Tinnefeld P, Weston KD, Ego C, Grimsdale A, Müllen K, Beljonne D, Brédas JL, Jordens S, Schweitzer G, Sauer M, De Schryver F. Revealing competitive Forster-type resonance energy-transfer pathways in single bichromophoric molecules. Proceedings of the National Academy of Sciences of the United States of America. 100: 13146-51. PMID 14583594 DOI: 10.1073/Pnas.2235805100  0.772
2003 Heilemann M, Buschmann V, Piestert O, Tinnefeld P, Weston KD, Sauer M. Development of a molecular photonic wire by means of multiparameter single-molecule spectroscopy Biomedical Optics. 4962: 38-46. DOI: 10.1117/12.478919  0.502
2003 Heinlein T, Heilemann M, Herten DP, Muller C, Tinnefeld P, Weston KD, Sauer M. Spectrally resolved fluorescence lifetime imaging microscopy (SFLIM) and coincidence analysis: new tools to study the organization of biomolecular machines Biomedical Optics. 4962: 47-57. DOI: 10.1117/12.478917  0.524
2003 Vosch T, Cotlet M, Hofkens J, Van Der Biest K, Lor M, Weston K, Tinnefeld P, Sauer M, Latterini L, Müllen K, De Schryver FC. Probing Förster Type Energy Pathways in a First Generation Rigid Dendrimer Bearing Two Perylene Imide Chromophores The Journal of Physical Chemistry A. 107: 6920-6931. DOI: 10.1021/Jp034906D  0.74
2003 Tinnefeld P, Buschmann V, Weston KD, Sauer M. Direct Observation of Collective Blinking and Energy Transfer in a Bichromophoric System The Journal of Physical Chemistry A. 107: 323-327. DOI: 10.1021/Jp026565U  0.433
2002 Tinnefeld P, Weston KD, Vosch T, Cotlet M, Weil T, Hofkens J, Müllen K, De Schryver FC, Sauer M. Antibunching in the emission of a single tetrachromophoric dendritic system. Journal of the American Chemical Society. 124: 14310-1. PMID 12452697 DOI: 10.1021/Ja027343C  0.777
2002 Weston KD, Dyck M, Tinnefeld P, Müller C, Herten DP, Sauer M. Measuring the number of independent emitters in single-molecule fluorescence images and trajectories using coincident photons. Analytical Chemistry. 74: 5342-9. PMID 12403591 DOI: 10.1021/Ac025730Z  0.459
2002 Heilemann M, Herten DP, Heintzmann R, Cremer C, Muller C, Tinnefeld P, Weston KD, Wolfrum J, Sauer M. High-resolution colocalization of single dye molecules by fluorescence lifetime imaging microscopy. Analytical Chemistry. 74: 3511-7. PMID 12139062 DOI: 10.1021/Ac025576G  0.681
2001 Tinnefeld P, Herten D, Sauer M. Photophysical Dynamics of Single Molecules Studied by Spectrally-Resolved Fluorescence Lifetime Imaging Microscopy (SFLIM) Journal of Physical Chemistry A. 105: 7989-8003. DOI: 10.1021/Jp010365L  0.551
2001 Tinnefeld P, Müller C, Sauer M. Time-varying photon probability distribution of individual molecules at room temperature Chemical Physics Letters. 345: 252-258. DOI: 10.1016/S0009-2614(01)00883-1  0.389
2000 Herten DP, Tinnefeld P, Sauer M. Identification of single fluorescently labelled mononucleotide molecules in solution by spectrally resolved time-correlated single-photon counting Applied Physics B. 71: 765-771. DOI: 10.1007/S003400000405  0.52
2000 Tinnefeld P, Buschmann V, Herten D, Han K, Sauer M. Confocal Fluorescence Lifetime Imaging Microscopy (FLIM) at the Single Molecule Level Single Molecules. 1: 215-223. DOI: 10.1002/1438-5171(200009)1:3<215::Aid-Simo215>3.0.Co;2-S  0.514
2000 Irngartinger H, Fettel PW, Escher T, Tinnefeld P, Nord S, Sauer M. Substituent Effects on Redox Properties and Photoinduced Electron Transfer in Isoxazolo‐Fullerenes European Journal of Organic Chemistry. 2000: 455-465. DOI: 10.1002/(Sici)1099-0690(200002)2000:3<455::Aid-Ejoc455>3.0.Co;2-N  0.317
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